Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052866.t1 | XP_024627631.1 | 89.2 | 408 | 44 | 0 | 1 | 408 | 85 | 492 | 7.00E-206 | 726.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052866.t1 | Q9SKU6 | 39.3 | 377 | 222 | 3 | 1 | 376 | 96 | 466 | 1.1e-79 | 298.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052866.t1 | A0A072TQ66 | 89.2 | 408 | 44 | 0 | 1 | 408 | 85 | 492 | 5.0e-206 | 726.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051933 | MS.gene052866 | 0.806048 | 9.94E-50 | -1.69E-46 |
| MS.gene052866 | MS.gene052867 | 0.915642 | 4.62E-85 | -1.69E-46 |
| MS.gene052866 | MS.gene058979 | 0.804004 | 2.66E-49 | -1.69E-46 |
| MS.gene052866 | MS.gene06269 | 0.800201 | 1.61E-48 | -1.69E-46 |
| MS.gene052866 | MS.gene070899 | 0.80303 | 4.23E-49 | -1.69E-46 |
| MS.gene052866 | MS.gene070901 | 0.812791 | 3.55E-51 | -1.69E-46 |
| MS.gene052866 | MS.gene07733 | 0.800979 | 1.12E-48 | -1.69E-46 |
| MS.gene052866 | MS.gene25755 | 0.812859 | 3.43E-51 | -1.69E-46 |
| MS.gene052866 | MS.gene28498 | 0.80261 | 5.17E-49 | -1.69E-46 |
| MS.gene052866 | MS.gene30970 | 0.808477 | 3.04E-50 | -1.69E-46 |
| MS.gene052866 | MS.gene31142 | 0.80634 | 8.63E-50 | -1.69E-46 |
| MS.gene052866 | MS.gene31283 | 0.808513 | 2.99E-50 | -1.69E-46 |
| MS.gene052866 | MS.gene32874 | 0.808516 | 2.98E-50 | -1.69E-46 |
| MS.gene052866 | MS.gene33131 | 0.80223 | 6.19E-49 | -1.69E-46 |
| MS.gene052866 | MS.gene41121 | 0.8018 | 7.59E-49 | -1.69E-46 |
| MS.gene052866 | MS.gene44603 | 0.800127 | 1.67E-48 | -1.69E-46 |
| MS.gene052866 | MS.gene52059 | 0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene052866 | MS.gene52061 | 0.816513 | 5.32E-52 | -1.69E-46 |
| MS.gene052866 | MS.gene53924 | 0.902094 | 1.38E-78 | -1.69E-46 |
| MS.gene052866 | MS.gene53955 | 0.869513 | 2.93E-66 | -1.69E-46 |
| MS.gene052866 | MS.gene53956 | 0.897348 | 1.53E-76 | -1.69E-46 |
| MS.gene052866 | MS.gene70515 | 0.800824 | 1.20E-48 | -1.69E-46 |
| MS.gene052866 | MS.gene72268 | 0.811195 | 7.90E-51 | -1.69E-46 |
| MS.gene052866 | MS.gene73596 | 0.804961 | 1.68E-49 | -1.69E-46 |
| MS.gene052866 | MS.gene75619 | -0.815189 | 1.05E-51 | -1.69E-46 |
| MS.gene052866 | MS.gene76148 | 0.81119 | 7.93E-51 | -1.69E-46 |
| MS.gene052866 | MS.gene81047 | 0.812762 | 3.60E-51 | -1.69E-46 |
| MS.gene052866 | MS.gene83734 | 0.81726 | 3.62E-52 | -1.69E-46 |
| MS.gene052866 | MS.gene93041 | 0.808233 | 3.42E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052866.t1 | MTR_8g465890 | 96.324 | 408 | 15 | 0 | 1 | 408 | 85 | 492 | 0.0 | 812 |
| MS.gene052866.t1 | MTR_2g047855 | 86.098 | 410 | 51 | 3 | 1 | 408 | 89 | 494 | 0.0 | 712 |
| MS.gene052866.t1 | MTR_2g090290 | 51.459 | 377 | 173 | 2 | 12 | 381 | 101 | 474 | 2.75e-130 | 384 |
| MS.gene052866.t1 | MTR_8g059115 | 30.769 | 403 | 268 | 7 | 1 | 398 | 1 | 397 | 8.16e-60 | 200 |
| MS.gene052866.t1 | MTR_8g069570 | 32.958 | 355 | 229 | 5 | 4 | 353 | 83 | 433 | 4.19e-58 | 197 |
| MS.gene052866.t1 | MTR_8g007375 | 31.285 | 358 | 239 | 5 | 7 | 361 | 8 | 361 | 4.58e-52 | 179 |
| MS.gene052866.t1 | MTR_2g013450 | 34.277 | 318 | 203 | 4 | 15 | 330 | 100 | 413 | 8.65e-51 | 178 |
| MS.gene052866.t1 | MTR_1g072300 | 31.148 | 366 | 241 | 6 | 1 | 361 | 95 | 454 | 4.03e-48 | 171 |
| MS.gene052866.t1 | MTR_3g099753 | 29.570 | 372 | 239 | 8 | 1 | 360 | 95 | 455 | 2.01e-45 | 164 |
| MS.gene052866.t1 | MTR_3g099753 | 29.570 | 372 | 239 | 8 | 1 | 360 | 119 | 479 | 2.27e-45 | 164 |
| MS.gene052866.t1 | MTR_1g086820 | 30.747 | 348 | 228 | 6 | 5 | 347 | 92 | 431 | 1.60e-44 | 161 |
| MS.gene052866.t1 | MTR_1g022400 | 29.643 | 280 | 189 | 6 | 1 | 276 | 112 | 387 | 1.04e-26 | 110 |
| MS.gene052866.t1 | MTR_7g089770 | 25.201 | 373 | 251 | 12 | 1 | 364 | 214 | 567 | 1.39e-23 | 103 |
| MS.gene052866.t1 | MTR_1g050750 | 23.784 | 370 | 260 | 9 | 1 | 364 | 148 | 501 | 1.31e-17 | 85.1 |
| MS.gene052866.t1 | MTR_1g048080 | 24.841 | 314 | 218 | 8 | 46 | 353 | 340 | 641 | 8.62e-15 | 77.0 |
| MS.gene052866.t1 | MTR_8g031510 | 28.906 | 128 | 90 | 1 | 235 | 361 | 1 | 128 | 1.15e-12 | 66.2 |
| MS.gene052866.t1 | MTR_8g098755 | 22.713 | 317 | 229 | 8 | 47 | 354 | 240 | 549 | 3.34e-12 | 68.6 |
| MS.gene052866.t1 | MTR_8g031520 | 30.303 | 132 | 84 | 3 | 11 | 139 | 173 | 299 | 4.28e-12 | 67.0 |
| MS.gene052866.t1 | MTR_7g091410 | 23.263 | 331 | 211 | 9 | 25 | 316 | 130 | 456 | 9.38e-12 | 67.0 |
| MS.gene052866.t1 | MTR_5g077220 | 22.222 | 270 | 201 | 8 | 46 | 312 | 466 | 729 | 1.04e-11 | 67.4 |
| MS.gene052866.t1 | MTR_7g091410 | 23.263 | 331 | 211 | 9 | 25 | 316 | 171 | 497 | 1.07e-11 | 67.0 |
| MS.gene052866.t1 | MTR_7g091410 | 22.590 | 332 | 214 | 8 | 24 | 316 | 235 | 562 | 1.18e-11 | 67.0 |
| MS.gene052866.t1 | MTR_7g091410 | 23.193 | 332 | 212 | 9 | 24 | 316 | 374 | 701 | 1.21e-11 | 67.0 |
| MS.gene052866.t1 | MTR_2g096880 | 20.882 | 340 | 259 | 5 | 13 | 347 | 113 | 447 | 1.51e-11 | 66.2 |
| MS.gene052866.t1 | MTR_7g066990 | 20.552 | 326 | 245 | 8 | 18 | 338 | 194 | 510 | 3.74e-11 | 65.5 |
| MS.gene052866.t1 | MTR_3g033040 | 24.280 | 243 | 176 | 5 | 36 | 275 | 195 | 432 | 8.37e-11 | 63.9 |
| MS.gene052866.t1 | MTR_3g033040 | 24.280 | 243 | 176 | 5 | 36 | 275 | 195 | 432 | 9.06e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052866.t1 | AT2G20710 | 39.835 | 364 | 215 | 2 | 1 | 363 | 1 | 361 | 1.07e-97 | 297 |
| MS.gene052866.t1 | AT2G20710 | 39.835 | 364 | 215 | 2 | 1 | 363 | 96 | 456 | 2.87e-96 | 296 |
| MS.gene052866.t1 | AT1G60770 | 34.637 | 358 | 222 | 7 | 4 | 353 | 83 | 436 | 5.33e-63 | 210 |
| MS.gene052866.t1 | AT1G02150 | 31.877 | 389 | 250 | 8 | 7 | 384 | 132 | 516 | 7.73e-58 | 197 |
| MS.gene052866.t1 | AT5G27460 | 32.162 | 370 | 234 | 7 | 1 | 360 | 96 | 458 | 1.30e-52 | 183 |
| MS.gene052866.t1 | AT4G21705 | 32.704 | 318 | 206 | 5 | 15 | 328 | 97 | 410 | 1.10e-49 | 175 |
| MS.gene052866.t1 | AT4G01990 | 31.507 | 365 | 242 | 5 | 5 | 366 | 101 | 460 | 8.02e-47 | 167 |
| MS.gene052866.t1 | AT1G28020 | 34.323 | 303 | 181 | 5 | 1 | 294 | 94 | 387 | 3.15e-43 | 158 |
| MS.gene052866.t1 | AT4G02820 | 27.151 | 372 | 264 | 5 | 1 | 371 | 119 | 484 | 1.14e-40 | 151 |
| MS.gene052866.t1 | AT1G02370 | 31.119 | 286 | 190 | 5 | 4 | 286 | 131 | 412 | 3.55e-38 | 145 |
| MS.gene052866.t1 | AT5G09450 | 30.682 | 264 | 178 | 4 | 12 | 272 | 124 | 385 | 7.22e-25 | 105 |
| MS.gene052866.t1 | AT3G11380 | 28.571 | 287 | 163 | 7 | 4 | 284 | 103 | 353 | 1.31e-24 | 106 |
| MS.gene052866.t1 | AT3G11380 | 34.752 | 141 | 86 | 4 | 1 | 138 | 404 | 541 | 6.22e-12 | 67.8 |
| MS.gene052866.t1 | AT1G80270 | 26.359 | 368 | 246 | 9 | 5 | 364 | 190 | 540 | 3.93e-23 | 102 |
| MS.gene052866.t1 | AT1G80270 | 26.359 | 368 | 246 | 9 | 5 | 364 | 190 | 540 | 3.93e-23 | 102 |
| MS.gene052866.t1 | AT1G80270 | 26.359 | 368 | 246 | 9 | 5 | 364 | 190 | 540 | 3.93e-23 | 102 |
| MS.gene052866.t1 | AT1G80270 | 26.359 | 368 | 246 | 9 | 5 | 364 | 190 | 540 | 3.93e-23 | 102 |
| MS.gene052866.t1 | AT1G80270 | 26.359 | 368 | 246 | 9 | 5 | 364 | 190 | 540 | 3.93e-23 | 102 |
| MS.gene052866.t1 | AT2G20720 | 28.826 | 281 | 167 | 11 | 88 | 353 | 1 | 263 | 1.12e-22 | 97.8 |
| MS.gene052866.t1 | AT5G04810 | 25.962 | 312 | 219 | 7 | 45 | 353 | 345 | 647 | 1.67e-18 | 88.6 |
| MS.gene052866.t1 | AT5G04810 | 25.962 | 312 | 219 | 7 | 45 | 353 | 345 | 647 | 1.75e-18 | 88.2 |
| MS.gene052866.t1 | AT1G28000 | 28.761 | 226 | 146 | 6 | 9 | 225 | 99 | 318 | 5.92e-18 | 85.5 |
| MS.gene052866.t1 | AT1G15480 | 21.972 | 355 | 262 | 6 | 13 | 364 | 196 | 538 | 3.08e-15 | 78.2 |
| MS.gene052866.t1 | AT2G01740 | 20.536 | 336 | 259 | 5 | 18 | 350 | 63 | 393 | 5.86e-14 | 73.9 |
| MS.gene052866.t1 | AT1G62590 | 22.222 | 333 | 233 | 8 | 43 | 365 | 259 | 575 | 7.12e-12 | 67.8 |
| MS.gene052866.t1 | AT1G62590 | 22.222 | 333 | 233 | 8 | 43 | 365 | 259 | 575 | 7.12e-12 | 67.8 |
| MS.gene052866.t1 | AT1G63330 | 22.253 | 364 | 246 | 10 | 12 | 365 | 164 | 500 | 2.33e-11 | 65.9 |
| MS.gene052866.t1 | AT1G63330 | 22.253 | 364 | 246 | 10 | 12 | 365 | 164 | 500 | 2.33e-11 | 65.9 |
| MS.gene052866.t1 | AT1G63330 | 22.253 | 364 | 246 | 10 | 12 | 365 | 164 | 500 | 2.33e-11 | 65.9 |
| MS.gene052866.t1 | AT5G61990 | 21.994 | 341 | 226 | 7 | 70 | 374 | 440 | 776 | 3.01e-11 | 65.9 |
| MS.gene052866.t1 | AT1G12300 | 22.507 | 351 | 239 | 10 | 47 | 388 | 276 | 602 | 5.06e-11 | 65.1 |
| MS.gene052866.t1 | AT3G15590 | 23.018 | 391 | 282 | 9 | 6 | 390 | 204 | 581 | 9.24e-11 | 64.3 |
| MS.gene052866.t1 | AT3G15590 | 23.018 | 391 | 282 | 9 | 6 | 390 | 204 | 581 | 9.24e-11 | 64.3 |
Find 0 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATTATAAGTATAACGATA+TGG | - | 31140:19102-19121 | MS.gene052866:CDS | 20.0% |
| !! | TAAATTAGATGGAAGAATAT+GGG | - | 31140:19063-19082 | MS.gene052866:CDS | 20.0% |
| ! | AAAAGAGATGGTAAATTAGA+TGG | - | 31140:19052-19071 | MS.gene052866:CDS | 25.0% |
| ! | AATATCTGCAAAAGCTTAAA+TGG | - | 31140:18833-18852 | MS.gene052866:CDS | 25.0% |
| ! | AATGCATTGAAACTATTGAA+AGG | - | 31140:19343-19362 | MS.gene052866:CDS | 25.0% |
| ! | AGAAACCTTCATTTATTATC+AGG | - | 31140:18212-18231 | MS.gene052866:CDS | 25.0% |
| ! | ATAATTTATCAACTCATCAC+AGG | + | 31140:19299-19318 | None:intergenic | 25.0% |
| ! | GTAAATTAGATGGAAGAATA+TGG | - | 31140:19062-19081 | MS.gene052866:CDS | 25.0% |
| ! | TACAATGAAGAAAGCAATAT+TGG | - | 31140:19138-19157 | MS.gene052866:CDS | 25.0% |
| ! | TATCTCCTGATAATAAATGA+AGG | + | 31140:18220-18239 | None:intergenic | 25.0% |
| ! | TGACATTAACATAGAAATGT+AGG | + | 31140:18873-18892 | None:intergenic | 25.0% |
| ! | TTATTGTAAGAATGGTATGT+TGG | - | 31140:18997-19016 | MS.gene052866:CDS | 25.0% |
| AAATCTGAACAGTTGATTAG+AGG | - | 31140:18728-18747 | MS.gene052866:CDS | 30.0% | |
| ACACACTTCAAAAGATTTCA+AGG | - | 31140:18313-18332 | MS.gene052866:CDS | 30.0% | |
| AGGATGATGTGTATAGAATT+TGG | - | 31140:18810-18829 | MS.gene052866:CDS | 30.0% | |
| ATACATGCAGCAAAAGTAAA+TGG | + | 31140:19190-19209 | None:intergenic | 30.0% | |
| ATCACAACATAACTTTGAAC+TGG | - | 31140:18633-18652 | MS.gene052866:CDS | 30.0% | |
| CATGAAAGAAAAGAGAGATT+TGG | - | 31140:19216-19235 | MS.gene052866:CDS | 30.0% | |
| GTTAGTGCTTATTGTAAGAA+TGG | - | 31140:18989-19008 | MS.gene052866:CDS | 30.0% | |
| TAACTAAGTATGCTGCTATT+GGG | - | 31140:18783-18802 | MS.gene052866:CDS | 30.0% | |
| TAAGAATGGTATGTTGGAAA+AGG | - | 31140:19003-19022 | MS.gene052866:CDS | 30.0% | |
| TACATGCAGCAAAAGTAAAT+GGG | + | 31140:19189-19208 | None:intergenic | 30.0% | |
| TACTAGTAACATAGATGAGA+TGG | - | 31140:18583-18602 | MS.gene052866:CDS | 30.0% | |
| TCAAAAGATTTCAAGGTCTA+TGG | - | 31140:18320-18339 | MS.gene052866:CDS | 30.0% | |
| TCGAATCTAAATGACATTGA+TGG | - | 31140:18896-18915 | MS.gene052866:CDS | 30.0% | |
| TTCCAATAATGAACAAGACT+TGG | - | 31140:18421-18440 | MS.gene052866:CDS | 30.0% | |
| TTCTGTTAAAGCTCTATTCT+CGG | - | 31140:18459-18478 | MS.gene052866:CDS | 30.0% | |
| ! | ACATAGAAATGTAGGTTGAA+TGG | + | 31140:18865-18884 | None:intergenic | 30.0% |
| ! | GCTGATGGATATATTAAAGT+TGG | - | 31140:18674-18693 | MS.gene052866:CDS | 30.0% |
| !! | GAGTTGATAAATTATGTGCA+AGG | - | 31140:19304-19323 | MS.gene052866:CDS | 30.0% |
| !! | TACCAAGTCTTGTTCATTAT+TGG | + | 31140:18426-18445 | None:intergenic | 30.0% |
| !!! | TTGAAATCTTTTGAAGTGTG+TGG | + | 31140:18314-18333 | None:intergenic | 30.0% |
| ACAATACAACTCTGTTGAGA+GGG | - | 31140:18364-18383 | MS.gene052866:CDS | 35.0% | |
| AGATGAGATGGAGAAGTTAT+TGG | - | 31140:18595-18614 | MS.gene052866:CDS | 35.0% | |
| CTAACTAAGTATGCTGCTAT+TGG | - | 31140:18782-18801 | MS.gene052866:CDS | 35.0% | |
| TAAAGTTGGCCAATTTGACA+AGG | - | 31140:18688-18707 | MS.gene052866:CDS | 35.0% | |
| TAAGCACTAACCATCACATT+TGG | + | 31140:18980-18999 | None:intergenic | 35.0% | |
| TGAAAGGAGATTATCATCTG+AGG | - | 31140:19359-19378 | MS.gene052866:CDS | 35.0% | |
| TGTCAGAATTCCAAATGTGA+TGG | - | 31140:18967-18986 | MS.gene052866:CDS | 35.0% | |
| ! | AAAAGGCAGAAGCATATGTT+GGG | - | 31140:19020-19039 | MS.gene052866:CDS | 35.0% |
| ! | AGAAAAGAGAGATTTGGAGT+TGG | - | 31140:19222-19241 | MS.gene052866:CDS | 35.0% |
| ! | AGAAATGTAGGTTGAATGGT+GGG | + | 31140:18861-18880 | None:intergenic | 35.0% |
| ! | TAGAAATGTAGGTTGAATGG+TGG | + | 31140:18862-18881 | None:intergenic | 35.0% |
| ACAGTTCCACACTTACTAGT+TGG | - | 31140:18543-18562 | MS.gene052866:CDS | 40.0% | |
| ATTGAGCCAACTAGTAAGTG+TGG | + | 31140:18552-18571 | None:intergenic | 40.0% | |
| CACAATACAACTCTGTTGAG+AGG | - | 31140:18363-18382 | MS.gene052866:CDS | 40.0% | |
| CTATCAACGCCTTGTCAAAT+TGG | + | 31140:18700-18719 | None:intergenic | 40.0% | |
| GCAGCAAAAGTAAATGGGTA+AGG | + | 31140:19184-19203 | None:intergenic | 40.0% | |
| GTATGCTGCTATTGGGAAAA+AGG | - | 31140:18790-18809 | MS.gene052866:CDS | 40.0% | |
| TGGAAGAATATGGGATCGTT+TGG | - | 31140:19072-19091 | MS.gene052866:CDS | 40.0% | |
| TTAAAGCTCTATTCTCGGAC+AGG | - | 31140:18464-18483 | MS.gene052866:CDS | 40.0% | |
| ! | AGTTGGCATTGGAGATTCTT+GGG | - | 31140:19239-19258 | MS.gene052866:CDS | 40.0% |
| ! | ATTCTAGAGGAATGGGAATC+TGG | - | 31140:18929-18948 | MS.gene052866:CDS | 40.0% |
| ! | GAAAAGGCAGAAGCATATGT+TGG | - | 31140:19019-19038 | MS.gene052866:CDS | 40.0% |
| ! | TGAGACGATTCTAGAGGAAT+GGG | - | 31140:18922-18941 | MS.gene052866:CDS | 40.0% |
| !! | GGGAGGCTTTTAAAAAGAGA+TGG | - | 31140:19040-19059 | MS.gene052866:CDS | 40.0% |
| ACCTTGATAGGTAAAGTCCG+CGG | - | 31140:18254-18273 | MS.gene052866:CDS | 45.0% | |
| ACGTATTCTGCTGTTGCTGA+TGG | - | 31140:18659-18678 | MS.gene052866:CDS | 45.0% | |
| GAGCAACCAACTTCTCATGT+TGG | + | 31140:18490-18509 | None:intergenic | 45.0% | |
| GCAATATTGGCAAGTCCACA+AGG | - | 31140:19151-19170 | MS.gene052866:CDS | 45.0% | |
| GGAGAAGTTATTGGCGAAGA+TGG | - | 31140:18604-18623 | MS.gene052866:CDS | 45.0% | |
| TATTGGCAAGTCCACAAGGA+TGG | - | 31140:19155-19174 | MS.gene052866:CDS | 45.0% | |
| TCTGAGGATTGATGAAGTGC+CGG | - | 31140:19375-19394 | MS.gene052866:CDS | 45.0% | |
| ! | CTGAGACGATTCTAGAGGAA+TGG | - | 31140:18921-18940 | MS.gene052866:CDS | 45.0% |
| ! | GAGAGATTTGGAGTTGGCAT+TGG | - | 31140:19228-19247 | MS.gene052866:CDS | 45.0% |
| ! | GAGTTGGCATTGGAGATTCT+TGG | - | 31140:19238-19257 | MS.gene052866:CDS | 45.0% |
| ACCGCGGACTTTACCTATCA+AGG | + | 31140:18258-18277 | None:intergenic | 50.0% | |
| ATATGGGATCGTTTGGCGCA+TGG | - | 31140:19079-19098 | MS.gene052866:CDS | 50.0% | |
| GACAGGCCAACATGAGAAGT+TGG | - | 31140:18481-18500 | MS.gene052866:CDS | 50.0% | |
| GCGATACGTCTCACCTTGAT+AGG | - | 31140:18242-18261 | MS.gene052866:CDS | 50.0% | |
| GGAGATTCTTGGGACGTGTA+GGG | - | 31140:19249-19268 | MS.gene052866:CDS | 50.0% | |
| GGGTAAGGTTTCCATCCTTG+TGG | + | 31140:19169-19188 | None:intergenic | 50.0% | |
| TCTCTGCTTGATCTAGACCG+CGG | + | 31140:18274-18293 | None:intergenic | 50.0% | |
| TGGAGATTCTTGGGACGTGT+AGG | - | 31140:19248-19267 | MS.gene052866:CDS | 50.0% | |
| TGGAGCTGAGACGATTCTAG+AGG | - | 31140:18916-18935 | MS.gene052866:CDS | 50.0% | |
| ! | AGGCAGAAGCATATGTTGGG+AGG | - | 31140:19023-19042 | MS.gene052866:CDS | 50.0% |
| !! | ATTGATGAAGTGCCGGTGGA+TGG | - | 31140:19382-19401 | MS.gene052866:CDS | 50.0% |
| CTTGGGACGTGTAGGGAACT+AGG | - | 31140:19256-19275 | MS.gene052866:CDS | 55.0% | |
| TGTTGCTCCTCTCCATCCAC+CGG | + | 31140:19397-19416 | None:intergenic | 55.0% | |
| !! | GAGGATTGATGAAGTGCCGG+TGG | - | 31140:19378-19397 | MS.gene052866:CDS | 55.0% |
| !! | TGAAGTGCCGGTGGATGGAG+AGG | - | 31140:19387-19406 | MS.gene052866:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 31140 | gene | 18200 | 19426 | 18200 | ID=MS.gene052866 |
| 31140 | mRNA | 18200 | 19426 | 18200 | ID=MS.gene052866.t1;Parent=MS.gene052866 |
| 31140 | exon | 18200 | 19426 | 18200 | ID=MS.gene052866.t1.exon1;Parent=MS.gene052866.t1 |
| 31140 | CDS | 18200 | 19426 | 18200 | ID=cds.MS.gene052866.t1;Parent=MS.gene052866.t1 |
| Gene Sequence |
| Protein sequence |
