Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75619.t1 | KEH35253.1 | 98.9 | 285 | 3 | 0 | 1 | 285 | 1 | 285 | 2.00E-130 | 475.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75619.t1 | Q8GZ43 | 72.1 | 229 | 58 | 3 | 1 | 225 | 1 | 227 | 8.7e-95 | 348.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75619.t1 | A0A072V1K4 | 98.9 | 285 | 3 | 0 | 1 | 285 | 1 | 285 | 1.4e-130 | 475.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049195 | MS.gene75619 | -0.802181 | 6.34E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene75619 | -0.813178 | 2.92E-51 | -1.69E-46 |
| MS.gene049297 | MS.gene75619 | -0.806957 | 6.39E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene75619 | -0.838112 | 3.49E-57 | -1.69E-46 |
| MS.gene049669 | MS.gene75619 | -0.840399 | 8.90E-58 | -1.69E-46 |
| MS.gene049825 | MS.gene75619 | -0.837513 | 4.97E-57 | -1.69E-46 |
| MS.gene049873 | MS.gene75619 | -0.832723 | 8.03E-56 | -1.69E-46 |
| MS.gene050026 | MS.gene75619 | -0.812314 | 4.51E-51 | -1.69E-46 |
| MS.gene050156 | MS.gene75619 | -0.804722 | 1.88E-49 | -1.69E-46 |
| MS.gene050201 | MS.gene75619 | -0.828283 | 9.80E-55 | -1.69E-46 |
| MS.gene050226 | MS.gene75619 | -0.822695 | 2.06E-53 | -1.69E-46 |
| MS.gene050227 | MS.gene75619 | -0.854545 | 1.15E-61 | -1.69E-46 |
| MS.gene050228 | MS.gene75619 | -0.85338 | 2.48E-61 | -1.69E-46 |
| MS.gene050303 | MS.gene75619 | -0.818253 | 2.16E-52 | -1.69E-46 |
| MS.gene050330 | MS.gene75619 | 0.857097 | 2.06E-62 | -1.69E-46 |
| MS.gene050355 | MS.gene75619 | -0.824031 | 1.01E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene75619 | -0.817827 | 2.69E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene75619 | -0.815813 | 7.63E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene75619 | 0.839419 | 1.60E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene75619 | -0.811277 | 7.59E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene75619 | -0.825412 | 4.76E-54 | -1.69E-46 |
| MS.gene050721 | MS.gene75619 | -0.827505 | 1.51E-54 | -1.69E-46 |
| MS.gene050724 | MS.gene75619 | -0.802783 | 4.76E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene75619 | -0.856662 | 2.76E-62 | -1.69E-46 |
| MS.gene050787 | MS.gene75619 | -0.837631 | 4.64E-57 | -1.69E-46 |
| MS.gene050820 | MS.gene75619 | -0.823603 | 1.27E-53 | -1.69E-46 |
| MS.gene050953 | MS.gene75619 | -0.846615 | 1.94E-59 | -1.69E-46 |
| MS.gene05119 | MS.gene75619 | 0.810536 | 1.10E-50 | -1.69E-46 |
| MS.gene051265 | MS.gene75619 | -0.836263 | 1.04E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene75619 | -0.819914 | 9.04E-53 | -1.69E-46 |
| MS.gene052176 | MS.gene75619 | -0.876284 | 1.58E-68 | -1.69E-46 |
| MS.gene052190 | MS.gene75619 | -0.834812 | 2.41E-56 | -1.69E-46 |
| MS.gene052302 | MS.gene75619 | -0.816059 | 6.72E-52 | -1.69E-46 |
| MS.gene052309 | MS.gene75619 | 0.888524 | 5.47E-73 | -1.69E-46 |
| MS.gene052333 | MS.gene75619 | -0.84107 | 5.94E-58 | -1.69E-46 |
| MS.gene052358 | MS.gene75619 | 0.929182 | 1.00E-92 | -1.69E-46 |
| MS.gene052361 | MS.gene75619 | 0.884979 | 1.21E-71 | -1.69E-46 |
| MS.gene052376 | MS.gene75619 | -0.835869 | 1.31E-56 | -1.69E-46 |
| MS.gene052384 | MS.gene75619 | -0.803198 | 3.91E-49 | -1.69E-46 |
| MS.gene052389 | MS.gene75619 | -0.824714 | 6.95E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene75619 | -0.826766 | 2.27E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene75619 | -0.807739 | 4.36E-50 | -1.69E-46 |
| MS.gene052586 | MS.gene75619 | -0.848386 | 6.34E-60 | -1.69E-46 |
| MS.gene052866 | MS.gene75619 | -0.815189 | 1.05E-51 | -1.69E-46 |
| MS.gene052867 | MS.gene75619 | -0.828101 | 1.08E-54 | -1.69E-46 |
| MS.gene052965 | MS.gene75619 | 0.827641 | 1.40E-54 | -1.69E-46 |
| MS.gene053054 | MS.gene75619 | 0.869364 | 3.27E-66 | -1.69E-46 |
| MS.gene053166 | MS.gene75619 | -0.803998 | 2.67E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene75619 | -0.805401 | 1.36E-49 | -1.69E-46 |
| MS.gene053221 | MS.gene75619 | -0.819933 | 8.95E-53 | -1.69E-46 |
| MS.gene053294 | MS.gene75619 | -0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene05414 | MS.gene75619 | -0.832088 | 1.15E-55 | -1.69E-46 |
| MS.gene05415 | MS.gene75619 | -0.824129 | 9.54E-54 | -1.69E-46 |
| MS.gene054160 | MS.gene75619 | -0.806613 | 7.55E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene75619 | -0.811418 | 7.07E-51 | -1.69E-46 |
| MS.gene054291 | MS.gene75619 | 0.861631 | 8.96E-64 | -1.69E-46 |
| MS.gene054405 | MS.gene75619 | -0.842664 | 2.25E-58 | -1.69E-46 |
| MS.gene054468 | MS.gene75619 | -0.841476 | 4.64E-58 | -1.69E-46 |
| MS.gene054559 | MS.gene75619 | -0.816166 | 6.36E-52 | -1.69E-46 |
| MS.gene05468 | MS.gene75619 | -0.804952 | 1.69E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene75619 | -0.822418 | 2.39E-53 | -1.69E-46 |
| MS.gene054942 | MS.gene75619 | -0.825156 | 5.47E-54 | -1.69E-46 |
| MS.gene055166 | MS.gene75619 | -0.805318 | 1.41E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene75619 | -0.822398 | 2.42E-53 | -1.69E-46 |
| MS.gene055358 | MS.gene75619 | -0.823377 | 1.43E-53 | -1.69E-46 |
| MS.gene055367 | MS.gene75619 | -0.805087 | 1.58E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene75619 | -0.8216 | 3.70E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene75619 | -0.828907 | 6.93E-55 | -1.69E-46 |
| MS.gene056069 | MS.gene75619 | 0.804973 | 1.67E-49 | -1.69E-46 |
| MS.gene056087 | MS.gene75619 | -0.852072 | 5.87E-61 | -1.69E-46 |
| MS.gene056506 | MS.gene75619 | -0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene056979 | MS.gene75619 | -0.806808 | 6.87E-50 | -1.69E-46 |
| MS.gene057021 | MS.gene75619 | -0.821445 | 4.02E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene75619 | -0.858564 | 7.55E-63 | -1.69E-46 |
| MS.gene057060 | MS.gene75619 | -0.823677 | 1.22E-53 | -1.69E-46 |
| MS.gene057079 | MS.gene75619 | -0.808476 | 3.04E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene75619 | -0.826814 | 2.21E-54 | -1.69E-46 |
| MS.gene05761 | MS.gene75619 | -0.814163 | 1.77E-51 | -1.69E-46 |
| MS.gene057967 | MS.gene75619 | -0.832546 | 8.89E-56 | -1.69E-46 |
| MS.gene058037 | MS.gene75619 | -0.828466 | 8.85E-55 | -1.69E-46 |
| MS.gene058498 | MS.gene75619 | -0.824167 | 9.35E-54 | -1.69E-46 |
| MS.gene058500 | MS.gene75619 | -0.81682 | 4.54E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene75619 | -0.827827 | 1.26E-54 | -1.69E-46 |
| MS.gene059272 | MS.gene75619 | -0.812206 | 4.76E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene75619 | -0.856301 | 3.53E-62 | -1.69E-46 |
| MS.gene059789 | MS.gene75619 | -0.826564 | 2.53E-54 | -1.69E-46 |
| MS.gene05979 | MS.gene75619 | -0.800893 | 1.16E-48 | -1.69E-46 |
| MS.gene060137 | MS.gene75619 | 0.85623 | 3.70E-62 | -1.69E-46 |
| MS.gene060322 | MS.gene75619 | -0.840148 | 1.03E-57 | -1.69E-46 |
| MS.gene060521 | MS.gene75619 | -0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene060572 | MS.gene75619 | -0.861767 | 8.14E-64 | -1.69E-46 |
| MS.gene060634 | MS.gene75619 | 0.837171 | 6.08E-57 | -1.69E-46 |
| MS.gene060683 | MS.gene75619 | -0.801643 | 8.17E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene75619 | -0.803578 | 3.26E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene75619 | -0.843481 | 1.36E-58 | -1.69E-46 |
| MS.gene061040 | MS.gene75619 | 0.935511 | 7.56E-97 | -1.69E-46 |
| MS.gene061114 | MS.gene75619 | 0.880889 | 3.78E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75619.t1 | MTR_3g085190 | 98.947 | 285 | 3 | 0 | 1 | 285 | 1 | 285 | 0.0 | 584 |
| MS.gene75619.t1 | MTR_3g085190 | 99.296 | 284 | 2 | 0 | 1 | 284 | 1 | 284 | 0.0 | 581 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75619.t1 | AT1G67325 | 70.588 | 289 | 78 | 4 | 1 | 284 | 1 | 287 | 7.43e-140 | 395 |
| MS.gene75619.t1 | AT1G67325 | 70.345 | 290 | 78 | 5 | 1 | 284 | 1 | 288 | 3.67e-138 | 391 |
Find 104 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTATGAGGTTCCATTTAC+TGG | 0.167642 | 3.3:-71190637 | MS.gene75619:CDS |
| GCAATGTCAATTTCTCTTTC+AGG | 0.172921 | 3.3:-71191386 | MS.gene75619:CDS |
| AAATTGACGTTACCACATTT+TGG | 0.177028 | 3.3:+71189507 | None:intergenic |
| TATATTGGTGCCCCACCTTA+TGG | 0.213371 | 3.3:-71190688 | MS.gene75619:CDS |
| GCATACCTGGGATCCGGGTT+TGG | 0.243357 | 3.3:+71189443 | None:intergenic |
| CGATGACAAGTCTCAGAAAA+AGG | 0.257099 | 3.3:-71189658 | MS.gene75619:CDS |
| GAAATTGACATTGCCGCAAC+TGG | 0.289903 | 3.3:+71191395 | None:intergenic |
| TAGGCTGATCCTCCAGTAAA+TGG | 0.316077 | 3.3:+71190625 | None:intergenic |
| ATATGCCATGCCCCAGCTAT+TGG | 0.331863 | 3.3:-71190237 | MS.gene75619:CDS |
| ATATTGGTGCCCCACCTTAT+GGG | 0.333502 | 3.3:-71190687 | MS.gene75619:CDS |
| CCTTATGGGTCTTTATTCAA+TGG | 0.342244 | 3.3:-71190673 | MS.gene75619:CDS |
| TGCCTTTGCAGGTTGATAAC+AGG | 0.342807 | 3.3:-71191894 | MS.gene75619:intron |
| TATGGCCTCGGTGTCCCTAT+TGG | 0.344398 | 3.3:-71190209 | MS.gene75619:CDS |
| CATACCTGGGATCCGGGTTT+GGG | 0.368855 | 3.3:+71189444 | None:intergenic |
| TCTGTCTGTTGCACTTGGTT+CGG | 0.369594 | 3.3:+71189109 | None:intergenic |
| ATGCAACTCGTGACAATGAT+TGG | 0.373547 | 3.3:-71189536 | MS.gene75619:CDS |
| GGGGCGTTGGAGCCTAAATA+AGG | 0.374623 | 3.3:+71190721 | None:intergenic |
| CTTCCGCTGCCAAGCGTGCC+AGG | 0.384768 | 3.3:-71191867 | MS.gene75619:CDS |
| GGTGCAGTTACGCATATTGC+AGG | 0.385655 | 3.3:+71191359 | None:intergenic |
| ATAAGGAGCTGCGGATGAAT+AGG | 0.393530 | 3.3:+71190738 | None:intergenic |
| TCATCCGCAGCTCCTTATTT+AGG | 0.393685 | 3.3:-71190733 | MS.gene75619:CDS |
| ACCATTGCTCCAGGTCCAAT+AGG | 0.396253 | 3.3:+71190194 | None:intergenic |
| TCCAGTAAATGGAACCTCAT+AGG | 0.398572 | 3.3:+71190636 | None:intergenic |
| GCTAGATGTAATGGTCTATA+CGG | 0.404926 | 3.3:+71190565 | None:intergenic |
| GGCCATAGCGATCCAATAGC+TGG | 0.408792 | 3.3:+71190225 | None:intergenic |
| GAATTATGATCAGCAGGCCT+TGG | 0.428440 | 3.3:+71191333 | None:intergenic |
| CCTTAGCAGGGCACTAGGCC+AGG | 0.428460 | 3.3:-71189690 | MS.gene75619:intron |
| ATCTCCAGATCAAAATGAAC+AGG | 0.432251 | 3.3:-71189040 | MS.gene75619:intron |
| CCAGTAAATGGAACCTCATA+GGG | 0.438911 | 3.3:+71190637 | None:intergenic |
| TTATCCCATACCATTGCTCC+AGG | 0.446633 | 3.3:+71190185 | None:intergenic |
| CTCGGTGTCCCTATTGGACC+TGG | 0.447427 | 3.3:-71190203 | MS.gene75619:CDS |
| TATGATCAGCAGGCCTTGGT+TGG | 0.450863 | 3.3:+71191337 | None:intergenic |
| CTGTTGCACTTGGTTCGGAA+TGG | 0.457553 | 3.3:+71189114 | None:intergenic |
| ACAATTCTGTCTGTTGCACT+TGG | 0.460673 | 3.3:+71189104 | None:intergenic |
| AAGGCAGCATACCTGGGATC+CGG | 0.463801 | 3.3:+71189437 | None:intergenic |
| CTATTGGATCGCTATGGCCT+CGG | 0.466850 | 3.3:-71190221 | MS.gene75619:CDS |
| GCTCCACTGGTGTATGGTGC+TGG | 0.469100 | 3.3:+71190538 | None:intergenic |
| CCATTGCTCCAGGTCCAATA+GGG | 0.469970 | 3.3:+71190195 | None:intergenic |
| TCAGCCTATCAGTACAGTTA+TGG | 0.471174 | 3.3:-71190610 | MS.gene75619:CDS |
| GCTGGTCCTGCTAGATGTAA+TGG | 0.476031 | 3.3:+71190556 | None:intergenic |
| TGTTGCACTTGGTTCGGAAT+GGG | 0.484091 | 3.3:+71189115 | None:intergenic |
| GTGTCCAACCACGGCTCCAC+TGG | 0.485675 | 3.3:+71190525 | None:intergenic |
| AAAAGATGCCGGAGGGAAGC+TGG | 0.486610 | 3.3:-71189167 | MS.gene75619:CDS |
| GCTTCCATAACTGTACTGAT+AGG | 0.490302 | 3.3:+71190606 | None:intergenic |
| AGTGTTCTTATCAGACTTTG+AGG | 0.491350 | 3.3:+71189297 | None:intergenic |
| ACCACGGCTCCACTGGTGTA+TGG | 0.498513 | 3.3:+71190532 | None:intergenic |
| GTAGCCGCAGGGAAGATGAT+TGG | 0.502761 | 3.3:-71191425 | MS.gene75619:CDS |
| TGCAACTCGTGACAATGATT+GGG | 0.502973 | 3.3:-71189535 | MS.gene75619:CDS |
| AGTCCTGGCACGCTTGGCAG+CGG | 0.503501 | 3.3:+71191864 | None:intergenic |
| CCTTGCCTTAGCAGGGCACT+AGG | 0.504169 | 3.3:-71189695 | MS.gene75619:intron |
| ATGATCAGCAGGCCTTGGTT+GGG | 0.505822 | 3.3:+71191338 | None:intergenic |
| ACTGCTCACCGTCATGTCTC+AGG | 0.507462 | 3.3:-71192199 | None:intergenic |
| TCACACTTCCAGCTTCCCTC+CGG | 0.511245 | 3.3:+71189159 | None:intergenic |
| ACCATCAGTCCTGGCACGCT+TGG | 0.511589 | 3.3:+71191858 | None:intergenic |
| GAAGCCTCTTCAAGCTCCAC+AGG | 0.514671 | 3.3:-71190761 | MS.gene75619:CDS |
| CACACCCAAACCCGGATCCC+AGG | 0.518215 | 3.3:-71189448 | MS.gene75619:intron |
| TATGGAAGCCGTGTTCCTGC+TGG | 0.519467 | 3.3:-71190592 | MS.gene75619:CDS |
| CTTACAGAATTATGATCAGC+AGG | 0.520212 | 3.3:+71191327 | None:intergenic |
| GGGGCACCAATATAAATTGA+AGG | 0.521368 | 3.3:+71190697 | None:intergenic |
| CACCAATATAAATTGAAGGG+GGG | 0.525042 | 3.3:+71190701 | None:intergenic |
| GCACCAATATAAATTGAAGG+GGG | 0.526551 | 3.3:+71190700 | None:intergenic |
| CCCTATTGGACCTGGAGCAA+TGG | 0.527038 | 3.3:-71190195 | MS.gene75619:intron |
| GCCAAGCGTGCCAGGACTGA+TGG | 0.535235 | 3.3:-71191859 | MS.gene75619:intron |
| GCCATAGCGATCCAATAGCT+GGG | 0.538615 | 3.3:+71190226 | None:intergenic |
| TGGTAACGCACCATCAGTCC+TGG | 0.539140 | 3.3:+71191849 | None:intergenic |
| AGGCAGCATACCTGGGATCC+GGG | 0.543582 | 3.3:+71189438 | None:intergenic |
| TGCTGACAAGCCAGCTGAGT+CGG | 0.544079 | 3.3:-71189079 | MS.gene75619:CDS |
| GGCACCAATATAAATTGAAG+GGG | 0.544339 | 3.3:+71190699 | None:intergenic |
| TACACCAGTGGAGCCGTGGT+TGG | 0.547754 | 3.3:-71190529 | MS.gene75619:CDS |
| GGTCTATACGGACTGCCAGC+AGG | 0.556407 | 3.3:+71190577 | None:intergenic |
| TGAATAAAGACCCATAAGGT+GGG | 0.565119 | 3.3:+71190677 | None:intergenic |
| CCAATCAGAGCAAAAGATGC+CGG | 0.573203 | 3.3:-71189178 | MS.gene75619:intron |
| TATAGACCATTACATCTAGC+AGG | 0.573249 | 3.3:-71190562 | MS.gene75619:CDS |
| CCCCAGCTATTGGATCGCTA+TGG | 0.578680 | 3.3:-71190227 | MS.gene75619:CDS |
| ACCAATATAAATTGAAGGGG+GGG | 0.578819 | 3.3:+71190702 | None:intergenic |
| TTGAATAAAGACCCATAAGG+TGG | 0.582236 | 3.3:+71190676 | None:intergenic |
| GCGATCCAATAGCTGGGGCA+TGG | 0.596562 | 3.3:+71190232 | None:intergenic |
| AAATGCAACACACCCAAACC+CGG | 0.600952 | 3.3:-71189456 | MS.gene75619:CDS |
| GATTGGACATGTCCCAGTTG+CGG | 0.602850 | 3.3:-71191408 | MS.gene75619:CDS |
| TAGGCCTGTGGAGCTTGAAG+AGG | 0.613687 | 3.3:+71190757 | None:intergenic |
| ACCATACACCAGTGGAGCCG+TGG | 0.614260 | 3.3:-71190533 | MS.gene75619:CDS |
| CCATTGAATAAAGACCCATA+AGG | 0.619596 | 3.3:+71190673 | None:intergenic |
| AAATTGACATTGCCGCAACT+GGG | 0.619691 | 3.3:+71191396 | None:intergenic |
| TATGAGGTTCCATTTACTGG+AGG | 0.626370 | 3.3:-71190634 | MS.gene75619:CDS |
| GGGCACCAATATAAATTGAA+GGG | 0.630466 | 3.3:+71190698 | None:intergenic |
| AGTGGAGCCGTGGTTGGACA+CGG | 0.632225 | 3.3:-71190523 | MS.gene75619:intron |
| GAACATACCGTGTCCAACCA+CGG | 0.632372 | 3.3:+71190516 | None:intergenic |
| GAATAAAGACCCATAAGGTG+GGG | 0.636716 | 3.3:+71190678 | None:intergenic |
| TGCGTAACTGCACCCAACCA+AGG | 0.643014 | 3.3:-71191350 | MS.gene75619:CDS |
| CAGTAAATGGAACCTCATAG+GGG | 0.648620 | 3.3:+71190638 | None:intergenic |
| TCAGAGCAAAAGATGCCGGA+GGG | 0.658717 | 3.3:-71189174 | MS.gene75619:intron |
| ATCAGAGCAAAAGATGCCGG+AGG | 0.659983 | 3.3:-71189175 | MS.gene75619:intron |
| AGTAAATGGAACCTCATAGG+GGG | 0.661420 | 3.3:+71190639 | None:intergenic |
| CCATAGCGATCCAATAGCTG+GGG | 0.661975 | 3.3:+71190227 | None:intergenic |
| GGAGCCTAAATAAGGAGCTG+CGG | 0.664165 | 3.3:+71190729 | None:intergenic |
| TTTGTTTGTAGGTAGCCGCA+GGG | 0.666364 | 3.3:-71191436 | MS.gene75619:intron |
| ACGGACTGCCAGCAGGAACA+CGG | 0.673399 | 3.3:+71190584 | None:intergenic |
| AAGTGCAACAGACAGAATTG+TGG | 0.680252 | 3.3:-71189102 | MS.gene75619:CDS |
| GCTGCGGATGAATAGGCCTG+TGG | 0.686536 | 3.3:+71190745 | None:intergenic |
| GTAAATGGAACCTCATAGGG+GGG | 0.695701 | 3.3:+71190640 | None:intergenic |
| GGACCAGCACCATACACCAG+TGG | 0.704235 | 3.3:-71190541 | MS.gene75619:CDS |
| GATTGGGCTTGTCCAAAATG+TGG | 0.706309 | 3.3:-71189519 | MS.gene75619:CDS |
| ATGTCCAATCATCTTCCCTG+CGG | 0.718395 | 3.3:+71191421 | None:intergenic |
| CAGGTCCAATAGGGACACCG+AGG | 0.741060 | 3.3:+71190204 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATAATTAAAAATAG+AGG | + | chr3.3:71189941-71189960 | None:intergenic | 10.0% |
| !! | AAATTTAACATAACTGTAAT+AGG | + | chr3.3:71190823-71190842 | None:intergenic | 15.0% |
| !! | AACATTGAATATAAACATAT+TGG | + | chr3.3:71189815-71189834 | None:intergenic | 15.0% |
| !! | ATAAGAATATAAAACAATAG+AGG | - | chr3.3:71190101-71190120 | MS.gene75619:intron | 15.0% |
| !! | GAAAAAAAAAGTAAGTTTAA+AGG | + | chr3.3:71190286-71190305 | None:intergenic | 15.0% |
| !!! | AGTTATGTTAAATTTTTTGT+TGG | - | chr3.3:71190828-71190847 | MS.gene75619:intron | 15.0% |
| !!! | GATATTTTTTCTTGTTTTAT+TGG | - | chr3.3:71191108-71191127 | MS.gene75619:intron | 15.0% |
| !!! | GTTTTTTTTGTGATATATAA+AGG | - | chr3.3:71189855-71189874 | MS.gene75619:intron | 15.0% |
| !!! | TAATTTTTTCTGATTAATGA+AGG | - | chr3.3:71190720-71190739 | MS.gene75619:CDS | 15.0% |
| !!! | TTAAATTTGTTTTTGTTTGT+AGG | - | chr3.3:71189662-71189681 | MS.gene75619:CDS | 15.0% |
| !! | AAAAACAAATTTAAATGCAC+CGG | + | chr3.3:71189656-71189675 | None:intergenic | 20.0% |
| !! | AATAGGATTATATCTACAAA+AGG | + | chr3.3:71190806-71190825 | None:intergenic | 20.0% |
| !! | AATCTACATAATAGATATGA+AGG | + | chr3.3:71191694-71191713 | None:intergenic | 20.0% |
| !! | AATTTAATGTGTCAATCAAT+TGG | + | chr3.3:71190020-71190039 | None:intergenic | 20.0% |
| !! | ATAAGATTCCTTAAAACAAA+TGG | + | chr3.3:71189283-71189302 | None:intergenic | 20.0% |
| !! | ATGTATTAAGAAACTTCAAT+TGG | + | chr3.3:71191519-71191538 | None:intergenic | 20.0% |
| !! | ATTGATTGACACATTAAATT+AGG | - | chr3.3:71190020-71190039 | MS.gene75619:intron | 20.0% |
| !! | ATTTAATGTGTCAATCAATT+GGG | + | chr3.3:71190019-71190038 | None:intergenic | 20.0% |
| !! | TATGATATAAATACAACAGT+TGG | - | chr3.3:71191880-71191899 | MS.gene75619:CDS | 20.0% |
| !! | TTAATGAAGGAAAATATTCA+AGG | - | chr3.3:71190733-71190752 | MS.gene75619:CDS | 20.0% |
| !! | TTATATGCATGCAAAATTTA+TGG | + | chr3.3:71191270-71191289 | None:intergenic | 20.0% |
| !! | TTGATTGACACATTAAATTA+GGG | - | chr3.3:71190021-71190040 | MS.gene75619:intron | 20.0% |
| !! | TTTAAAAAAATGCTGTATTC+TGG | - | chr3.3:71191166-71191185 | MS.gene75619:intron | 20.0% |
| !!! | ATTTTTTGTTGGTGATTATT+TGG | - | chr3.3:71190839-71190858 | MS.gene75619:intron | 20.0% |
| !!! | CAGCATTTTTTTAAAAACAA+TGG | + | chr3.3:71191161-71191180 | None:intergenic | 20.0% |
| !!! | GATTATTTAAAACTTTTGTC+AGG | - | chr3.3:71190959-71190978 | MS.gene75619:intron | 20.0% |
| !!! | TAAGATTCCAATTTTTTCAT+CGG | + | chr3.3:71189184-71189203 | None:intergenic | 20.0% |
| !!! | TGGCTAATATTTTAAATTGT+TGG | - | chr3.3:71191768-71191787 | MS.gene75619:intron | 20.0% |
| ! | AAAAACCATATGTGAAACTA+TGG | + | chr3.3:71191301-71191320 | None:intergenic | 25.0% |
| ! | AAAAAGTAAGTTTAAAGGAG+AGG | + | chr3.3:71190281-71190300 | None:intergenic | 25.0% |
| ! | AACTTCGACATTAATCAAAT+TGG | + | chr3.3:71189118-71189137 | None:intergenic | 25.0% |
| ! | ACATTCAGAAAAAGCTTAAT+TGG | + | chr3.3:71189066-71189085 | None:intergenic | 25.0% |
| ! | ATATAAAACAATAGAGGTCA+CGG | - | chr3.3:71190107-71190126 | MS.gene75619:intron | 25.0% |
| ! | ATTAAAAATAGAGGAAACAG+AGG | + | chr3.3:71189932-71189951 | None:intergenic | 25.0% |
| ! | ATTTAAGAGAGTGATAGTTT+AGG | - | chr3.3:71189372-71189391 | MS.gene75619:intron | 25.0% |
| ! | TTTAAGAGAGTGATAGTTTA+GGG | - | chr3.3:71189373-71189392 | MS.gene75619:intron | 25.0% |
| !! | ATTGCCATTTCAGATTATTA+GGG | + | chr3.3:71191334-71191353 | None:intergenic | 25.0% |
| !! | TATTGCCATTTCAGATTATT+AGG | + | chr3.3:71191335-71191354 | None:intergenic | 25.0% |
| !! | TTTTATGTCTCTGTTATCTA+TGG | - | chr3.3:71189420-71189439 | MS.gene75619:intron | 25.0% |
| !!! | AAGATTCCAATTTTTTCATC+GGG | + | chr3.3:71189183-71189202 | None:intergenic | 25.0% |
| !!! | ATCTTATCCATATGTTTTGA+CGG | - | chr3.3:71189296-71189315 | MS.gene75619:CDS | 25.0% |
| AAAGCTTAATTGGATCGAAT+TGG | + | chr3.3:71189056-71189075 | None:intergenic | 30.0% | |
| AAATTCAGTTGCTTGAATGA+TGG | + | chr3.3:71190672-71190691 | None:intergenic | 30.0% | |
| AAATTGCACAATCAGAAAGA+AGG | + | chr3.3:71191358-71191377 | None:intergenic | 30.0% | |
| AACAAATCCGTCAAAACATA+TGG | + | chr3.3:71189306-71189325 | None:intergenic | 30.0% | |
| AAGCTTAATTGGATCGAATT+GGG | + | chr3.3:71189055-71189074 | None:intergenic | 30.0% | |
| AATTCAGTTGCTTGAATGAT+GGG | + | chr3.3:71190671-71190690 | None:intergenic | 30.0% | |
| AATTGACAAAACCCTAATTG+AGG | + | chr3.3:71189007-71189026 | None:intergenic | 30.0% | |
| AGAAACGAGATCGATTAATT+AGG | + | chr3.3:71188980-71188999 | None:intergenic | 30.0% | |
| ATACAAGAAAGAATGCAGAT+TGG | + | chr3.3:71191014-71191033 | None:intergenic | 30.0% | |
| CATAGCAAGAATTTGTATTG+CGG | + | chr3.3:71189565-71189584 | None:intergenic | 30.0% | |
| CATTCAGTTGATTGAATGAT+GGG | + | chr3.3:71190632-71190651 | None:intergenic | 30.0% | |
| CTTATCCATAGTTTCACATA+TGG | - | chr3.3:71191293-71191312 | MS.gene75619:intron | 30.0% | |
| GAAACGAGATCGATTAATTA+GGG | + | chr3.3:71188979-71188998 | None:intergenic | 30.0% | |
| TCATCCATGCTTATAATCTA+TGG | - | chr3.3:71191748-71191767 | MS.gene75619:intron | 30.0% | |
| TCTGTTGCAACAATAAATGA+AGG | + | chr3.3:71192126-71192145 | None:intergenic | 30.0% | |
| TGAAGGTTAGCAAATTGAAA+AGG | + | chr3.3:71192109-71192128 | None:intergenic | 30.0% | |
| TGATCCCTAATAATCTGAAA+TGG | - | chr3.3:71191327-71191346 | MS.gene75619:intron | 30.0% | |
| TTAACTAAGTATAGCAAACC+TGG | + | chr3.3:71191479-71191498 | None:intergenic | 30.0% | |
| TTAGCCATAGATTATAAGCA+TGG | + | chr3.3:71191755-71191774 | None:intergenic | 30.0% | |
| TTGCATCTATACGGAAAAAT+GGG | + | chr3.3:71191559-71191578 | None:intergenic | 30.0% | |
| TTTATTGTTGCAACAGAGAT+TGG | - | chr3.3:71192129-71192148 | MS.gene75619:intron | 30.0% | |
| TTTCTGATTGTGCAATTTGA+TGG | - | chr3.3:71191360-71191379 | MS.gene75619:CDS | 30.0% | |
| TTTGAAAGCGAAATTGAAGA+AGG | + | chr3.3:71188956-71188975 | None:intergenic | 30.0% | |
| ! | AAATTGACGTTACCACATTT+TGG | + | chr3.3:71191605-71191624 | None:intergenic | 30.0% |
| ! | TCAACATATTCTGTGTTACT+TGG | - | chr3.3:71189452-71189471 | MS.gene75619:CDS | 30.0% |
| ! | TTGATTGAATGATGGGAAAA+GGG | + | chr3.3:71190625-71190644 | None:intergenic | 30.0% |
| ! | TTTGACATATGCTATTTGGT+TGG | - | chr3.3:71190233-71190252 | MS.gene75619:CDS | 30.0% |
| !! | GAGTTTTGACATATGCTATT+TGG | - | chr3.3:71190229-71190248 | MS.gene75619:CDS | 30.0% |
| !!! | AGATTCCAATTTTTTCATCG+GGG | + | chr3.3:71189182-71189201 | None:intergenic | 30.0% |
| !!! | TGACGGATTTGTTGTATTTT+AGG | - | chr3.3:71189313-71189332 | MS.gene75619:intron | 30.0% |
| AAAATAGAGGAAACAGAGGA+TGG | + | chr3.3:71189928-71189947 | None:intergenic | 35.0% | |
| AATATAGCTTCGTAAAGCCT+AGG | + | chr3.3:71191226-71191245 | None:intergenic | 35.0% | |
| ACCAATATAAATTGAAGGGG+GGG | + | chr3.3:71190410-71190429 | None:intergenic | 35.0% | |
| AGTGTTCTTATCAGACTTTG+AGG | + | chr3.3:71191815-71191834 | None:intergenic | 35.0% | |
| ATAGTGGTGAGTGTGAAAAT+AGG | + | chr3.3:71189534-71189553 | None:intergenic | 35.0% | |
| ATCTCCAGATCAAAATGAAC+AGG | - | chr3.3:71192069-71192088 | MS.gene75619:intron | 35.0% | |
| CACCAATATAAATTGAAGGG+GGG | + | chr3.3:71190411-71190430 | None:intergenic | 35.0% | |
| CCATCATTCAATCAACTGAA+TGG | - | chr3.3:71190630-71190649 | MS.gene75619:CDS | 35.0% | |
| CCATTCAGTTGATTGAATGA+TGG | + | chr3.3:71190633-71190652 | None:intergenic | 35.0% | |
| CCATTGAATAAAGACCCATA+AGG | + | chr3.3:71190439-71190458 | None:intergenic | 35.0% | |
| CCTTATGGGTCTTTATTCAA+TGG | - | chr3.3:71190436-71190455 | MS.gene75619:intron | 35.0% | |
| CTTACAGAATTATGATCAGC+AGG | + | chr3.3:71189785-71189804 | None:intergenic | 35.0% | |
| GATGACAAGTCTCAGAAAAA+GGG | - | chr3.3:71191452-71191471 | MS.gene75619:intron | 35.0% | |
| GCAATGTCAATTTCTCTTTC+AGG | - | chr3.3:71189723-71189742 | MS.gene75619:intron | 35.0% | |
| GCACCAATATAAATTGAAGG+GGG | + | chr3.3:71190412-71190431 | None:intergenic | 35.0% | |
| GCTAGATGTAATGGTCTATA+CGG | + | chr3.3:71190547-71190566 | None:intergenic | 35.0% | |
| GGCACCAATATAAATTGAAG+GGG | + | chr3.3:71190413-71190432 | None:intergenic | 35.0% | |
| GGGCACCAATATAAATTGAA+GGG | + | chr3.3:71190414-71190433 | None:intergenic | 35.0% | |
| GTTGCATCTATACGGAAAAA+TGG | + | chr3.3:71191560-71191579 | None:intergenic | 35.0% | |
| TATAGACCATTACATCTAGC+AGG | - | chr3.3:71190547-71190566 | MS.gene75619:CDS | 35.0% | |
| TGAATAAAGACCCATAAGGT+GGG | + | chr3.3:71190435-71190454 | None:intergenic | 35.0% | |
| TGCATCTATACGGAAAAATG+GGG | + | chr3.3:71191558-71191577 | None:intergenic | 35.0% | |
| TTGAATAAAGACCCATAAGG+TGG | + | chr3.3:71190436-71190455 | None:intergenic | 35.0% | |
| ! | ATATGCTATTTGGTTGGACA+TGG | - | chr3.3:71190239-71190258 | MS.gene75619:CDS | 35.0% |
| ! | GTTGATTGAATGATGGGAAA+AGG | + | chr3.3:71190626-71190645 | None:intergenic | 35.0% |
| ! | TATGCTATTTGGTTGGACAT+GGG | - | chr3.3:71190240-71190259 | MS.gene75619:CDS | 35.0% |
| ! | TTGCTTGAATGATGGGAAAA+GGG | + | chr3.3:71190664-71190683 | None:intergenic | 35.0% |
| ! | TTTTGATCTGGAGATGATGA+GGG | + | chr3.3:71192064-71192083 | None:intergenic | 35.0% |
| !! | ATTTTGATCTGGAGATGATG+AGG | + | chr3.3:71192065-71192084 | None:intergenic | 35.0% |
| !! | CAAACCTGTTCATTTTGATC+TGG | + | chr3.3:71192076-71192095 | None:intergenic | 35.0% |
| !! | GGATATGATTATTTTGCTGC+AGG | - | chr3.3:71191789-71191808 | MS.gene75619:intron | 35.0% |
| !! | TTTGTTGGTGATTATTTGGC+AGG | - | chr3.3:71190843-71190862 | MS.gene75619:intron | 35.0% |
| !!! | ATTCCAATTTTTTCATCGGG+GGG | + | chr3.3:71189180-71189199 | None:intergenic | 35.0% |
| !!! | GATTCCAATTTTTTCATCGG+GGG | + | chr3.3:71189181-71189200 | None:intergenic | 35.0% |
| !!! | GTGCGTTACCATTTGTTTTA+AGG | - | chr3.3:71189272-71189291 | MS.gene75619:intron | 35.0% |
| AAATTGACATTGCCGCAACT+GGG | + | chr3.3:71189716-71189735 | None:intergenic | 40.0% | |
| AAGTGCAACAGACAGAATTG+TGG | - | chr3.3:71192007-71192026 | MS.gene75619:intron | 40.0% | |
| ACAAGTACGAGTATGGTACT+GGG | + | chr3.3:71191199-71191218 | None:intergenic | 40.0% | |
| ACAATTCTGTCTGTTGCACT+TGG | + | chr3.3:71192008-71192027 | None:intergenic | 40.0% | |
| AGTAAATGGAACCTCATAGG+GGG | + | chr3.3:71190473-71190492 | None:intergenic | 40.0% | |
| ATGCAACTCGTGACAATGAT+TGG | - | chr3.3:71191573-71191592 | MS.gene75619:intron | 40.0% | |
| CAGTAAATGGAACCTCATAG+GGG | + | chr3.3:71190474-71190493 | None:intergenic | 40.0% | |
| CCAGTAAATGGAACCTCATA+GGG | + | chr3.3:71190475-71190494 | None:intergenic | 40.0% | |
| CGATGACAAGTCTCAGAAAA+AGG | - | chr3.3:71191451-71191470 | MS.gene75619:intron | 40.0% | |
| CTAACTGCAGAACGTGATTA+AGG | + | chr3.3:71191052-71191071 | None:intergenic | 40.0% | |
| CTTAATCACGTTCTGCAGTT+AGG | - | chr3.3:71191050-71191069 | MS.gene75619:intron | 40.0% | |
| GAATAAAGACCCATAAGGTG+GGG | + | chr3.3:71190434-71190453 | None:intergenic | 40.0% | |
| GACAAAACCCTAATTGAGGT+GGG | + | chr3.3:71189003-71189022 | None:intergenic | 40.0% | |
| GCATCTATACGGAAAAATGG+GGG | + | chr3.3:71191557-71191576 | None:intergenic | 40.0% | |
| GGGGGGTTAATTAAGCAAAA+AGG | + | chr3.3:71189163-71189182 | None:intergenic | 40.0% | |
| TAACCCCCCGATGAAAAAAT+TGG | - | chr3.3:71189174-71189193 | MS.gene75619:intron | 40.0% | |
| TATGAGGTTCCATTTACTGG+AGG | - | chr3.3:71190475-71190494 | MS.gene75619:intron | 40.0% | |
| TATTGCGGAACGTAACATAG+TGG | + | chr3.3:71189550-71189569 | None:intergenic | 40.0% | |
| TCAGCCTATCAGTACAGTTA+TGG | - | chr3.3:71190499-71190518 | MS.gene75619:intron | 40.0% | |
| TCCAGTAAATGGAACCTCAT+AGG | + | chr3.3:71190476-71190495 | None:intergenic | 40.0% | |
| TGACAAAACCCTAATTGAGG+TGG | + | chr3.3:71189004-71189023 | None:intergenic | 40.0% | |
| TGCAACTCGTGACAATGATT+GGG | - | chr3.3:71191574-71191593 | MS.gene75619:intron | 40.0% | |
| TGTCACGAGTTGCATCTATA+CGG | + | chr3.3:71191568-71191587 | None:intergenic | 40.0% | |
| TGTTCATCGTTGTGTCTCTT+GGG | - | chr3.3:71189985-71190004 | MS.gene75619:intron | 40.0% | |
| TTCCTGTTATCAACCTGCAA+AGG | + | chr3.3:71189220-71189239 | None:intergenic | 40.0% | |
| TTGTCATCGCGAAAAAATCC+TGG | + | chr3.3:71191440-71191459 | None:intergenic | 40.0% | |
| ! | GCTTCCATAACTGTACTGAT+AGG | + | chr3.3:71190506-71190525 | None:intergenic | 40.0% |
| ! | GGGGCACCAATATAAATTGA+AGG | + | chr3.3:71190415-71190434 | None:intergenic | 40.0% |
| ! | GTTGCTTGAATGATGGGAAA+AGG | + | chr3.3:71190665-71190684 | None:intergenic | 40.0% |
| ! | TCAATCTGTTTTGCCTTTGC+AGG | - | chr3.3:71189204-71189223 | MS.gene75619:intron | 40.0% |
| ! | TGAATGATGGGAAAAGGGAA+AGG | + | chr3.3:71190620-71190639 | None:intergenic | 40.0% |
| ! | TTGGTGATTATTTGGCAGGT+GGG | - | chr3.3:71190847-71190866 | MS.gene75619:intron | 40.0% |
| !! | TCTTCTCTGAAGCATCAGTA+TGG | - | chr3.3:71191131-71191150 | MS.gene75619:intron | 40.0% |
| AAATGCAACACACCCAAACC+CGG | - | chr3.3:71191653-71191672 | MS.gene75619:intron | 45.0% | |
| AAGTCCCTTTCCTCTAGCAA+GGG | - | chr3.3:71189614-71189633 | MS.gene75619:intron | 45.0% | |
| AAGTCTCAGAAAAAGGGACC+AGG | - | chr3.3:71191458-71191477 | MS.gene75619:intron | 45.0% | |
| ACAGAGGATGGACAATGCAA+AGG | + | chr3.3:71189916-71189935 | None:intergenic | 45.0% | |
| AGATATGAAGGCAGCATACC+TGG | + | chr3.3:71191682-71191701 | None:intergenic | 45.0% | |
| AGGATGCACAAGTACGAGTA+TGG | + | chr3.3:71191206-71191225 | None:intergenic | 45.0% | |
| AGTTAACCCTTGCCTTAGCA+GGG | - | chr3.3:71191407-71191426 | MS.gene75619:CDS | 45.0% | |
| ATAAGGAGCTGCGGATGAAT+AGG | + | chr3.3:71190374-71190393 | None:intergenic | 45.0% | |
| ATATCAGATCCCCTTGCTAG+AGG | + | chr3.3:71189627-71189646 | None:intergenic | 45.0% | |
| ATGTCCAATCATCTTCCCTG+CGG | + | chr3.3:71189691-71189710 | None:intergenic | 45.0% | |
| CACAAGTACGAGTATGGTAC+TGG | + | chr3.3:71191200-71191219 | None:intergenic | 45.0% | |
| CCAATCAGAGCAAAAGATGC+CGG | - | chr3.3:71191931-71191950 | MS.gene75619:intron | 45.0% | |
| CCCTATGAGGTTCCATTTAC+TGG | - | chr3.3:71190472-71190491 | MS.gene75619:intron | 45.0% | |
| CGTTTCTCCCACCTCAATTA+GGG | - | chr3.3:71188993-71189012 | MS.gene75619:intron | 45.0% | |
| CTGTTCATCGTTGTGTCTCT+TGG | - | chr3.3:71189984-71190003 | MS.gene75619:intron | 45.0% | |
| GAAATTGACATTGCCGCAAC+TGG | + | chr3.3:71189717-71189736 | None:intergenic | 45.0% | |
| GAAGAAGGCGATGAATCGAA+GGG | + | chr3.3:71188941-71188960 | None:intergenic | 45.0% | |
| GAATTATGATCAGCAGGCCT+TGG | + | chr3.3:71189779-71189798 | None:intergenic | 45.0% | |
| GATATGAAGGCAGCATACCT+GGG | + | chr3.3:71191681-71191700 | None:intergenic | 45.0% | |
| GATTGGGCTTGTCCAAAATG+TGG | - | chr3.3:71191590-71191609 | MS.gene75619:intron | 45.0% | |
| GCCCCCCCTTCAATTTATAT+TGG | - | chr3.3:71190406-71190425 | MS.gene75619:intron | 45.0% | |
| GTAAATGGAACCTCATAGGG+GGG | + | chr3.3:71190472-71190491 | None:intergenic | 45.0% | |
| TAAGTCCCTTTCCTCTAGCA+AGG | - | chr3.3:71189613-71189632 | MS.gene75619:intron | 45.0% | |
| TACTCGTACTTGTGCATCCT+AGG | - | chr3.3:71191206-71191225 | MS.gene75619:intron | 45.0% | |
| TAGGCTGATCCTCCAGTAAA+TGG | + | chr3.3:71190487-71190506 | None:intergenic | 45.0% | |
| TAGTTAACCCTTGCCTTAGC+AGG | - | chr3.3:71191406-71191425 | MS.gene75619:CDS | 45.0% | |
| TCGTTTCTCCCACCTCAATT+AGG | - | chr3.3:71188992-71189011 | MS.gene75619:intron | 45.0% | |
| TCTAGCAAGGGGATCTGATA+TGG | - | chr3.3:71189626-71189645 | MS.gene75619:intron | 45.0% | |
| TCTGTCTGTTGCACTTGGTT+CGG | + | chr3.3:71192003-71192022 | None:intergenic | 45.0% | |
| TGAAGAAGGCGATGAATCGA+AGG | + | chr3.3:71188942-71188961 | None:intergenic | 45.0% | |
| TTATCCCATACCATTGCTCC+AGG | + | chr3.3:71190927-71190946 | None:intergenic | 45.0% | |
| TTTGTTTGTAGGTAGCCGCA+GGG | - | chr3.3:71189673-71189692 | MS.gene75619:CDS | 45.0% | |
| ! | ATATTGGTGCCCCACCTTAT+GGG | - | chr3.3:71190422-71190441 | MS.gene75619:intron | 45.0% |
| ! | TATATTGGTGCCCCACCTTA+TGG | - | chr3.3:71190421-71190440 | MS.gene75619:intron | 45.0% |
| ! | TCATCCGCAGCTCCTTATTT+AGG | - | chr3.3:71190376-71190395 | MS.gene75619:intron | 45.0% |
| !! | GTTGGTGATTATTTGGCAGG+TGG | - | chr3.3:71190846-71190865 | MS.gene75619:intron | 45.0% |
| !! | TGCCTTTGCAGGTTGATAAC+AGG | - | chr3.3:71189215-71189234 | MS.gene75619:intron | 45.0% |
| !! | TGTTGCACTTGGTTCGGAAT+GGG | + | chr3.3:71191997-71192016 | None:intergenic | 45.0% |
| !! | TTTTGTTTGTAGGTAGCCGC+AGG | - | chr3.3:71189672-71189691 | MS.gene75619:CDS | 45.0% |
| !!! | ATTGAATTTAATATATTTTA+AGG | - | chr3.3:71189344-71189363 | MS.gene75619:intron | 5.0% |
| ACCATTGCTCCAGGTCCAAT+AGG | + | chr3.3:71190918-71190937 | None:intergenic | 50.0% | |
| AGATCCCCTTGCTAGAGGAA+AGG | + | chr3.3:71189622-71189641 | None:intergenic | 50.0% | |
| AGTCCCTTTCCTCTAGCAAG+GGG | - | chr3.3:71189615-71189634 | MS.gene75619:intron | 50.0% | |
| ATATGCCATGCCCCAGCTAT+TGG | - | chr3.3:71190872-71190891 | MS.gene75619:intron | 50.0% | |
| ATCAGAGCAAAAGATGCCGG+AGG | - | chr3.3:71191934-71191953 | MS.gene75619:intron | 50.0% | |
| ATGATCAGCAGGCCTTGGTT+GGG | + | chr3.3:71189774-71189793 | None:intergenic | 50.0% | |
| CCATAGCGATCCAATAGCTG+GGG | + | chr3.3:71190885-71190904 | None:intergenic | 50.0% | |
| CCATTGCTCCAGGTCCAATA+GGG | + | chr3.3:71190917-71190936 | None:intergenic | 50.0% | |
| CTATTGGATCGCTATGGCCT+CGG | - | chr3.3:71190888-71190907 | MS.gene75619:intron | 50.0% | |
| GAACATACCGTGTCCAACCA+CGG | + | chr3.3:71190596-71190615 | None:intergenic | 50.0% | |
| GAGGCTTCACAGCAGATTTC+TGG | + | chr3.3:71190336-71190355 | None:intergenic | 50.0% | |
| GATCCCCTTGCTAGAGGAAA+GGG | + | chr3.3:71189621-71189640 | None:intergenic | 50.0% | |
| GATTGGACATGTCCCAGTTG+CGG | - | chr3.3:71189701-71189720 | MS.gene75619:intron | 50.0% | |
| GCCATAGCGATCCAATAGCT+GGG | + | chr3.3:71190886-71190905 | None:intergenic | 50.0% | |
| GCTGGTCCTGCTAGATGTAA+TGG | + | chr3.3:71190556-71190575 | None:intergenic | 50.0% | |
| GGAGCCTAAATAAGGAGCTG+CGG | + | chr3.3:71190383-71190402 | None:intergenic | 50.0% | |
| GGGGATCTGATATGGTTCTC+CGG | - | chr3.3:71189634-71189653 | MS.gene75619:intron | 50.0% | |
| GGTGCAGTTACGCATATTGC+AGG | + | chr3.3:71189753-71189772 | None:intergenic | 50.0% | |
| TATGATCAGCAGGCCTTGGT+TGG | + | chr3.3:71189775-71189794 | None:intergenic | 50.0% | |
| TCAGAGCAAAAGATGCCGGA+GGG | - | chr3.3:71191935-71191954 | MS.gene75619:intron | 50.0% | |
| TGGACCTGGAGCAATGGTAT+GGG | - | chr3.3:71190920-71190939 | MS.gene75619:intron | 50.0% | |
| TTGGACCTGGAGCAATGGTA+TGG | - | chr3.3:71190919-71190938 | MS.gene75619:intron | 50.0% | |
| ! | ATAAATTGAAGGGGGGGCGT+TGG | + | chr3.3:71190404-71190423 | None:intergenic | 50.0% |
| ! | CCGGCATCTTTTGCTCTGAT+TGG | + | chr3.3:71191934-71191953 | None:intergenic | 50.0% |
| ! | GGAGATTTTTCCGACTCAGC+TGG | + | chr3.3:71192043-71192062 | None:intergenic | 50.0% |
| !! | CTGTTGCACTTGGTTCGGAA+TGG | + | chr3.3:71191998-71192017 | None:intergenic | 50.0% |
| AAAAGATGCCGGAGGGAAGC+TGG | - | chr3.3:71191942-71191961 | MS.gene75619:intron | 55.0% | |
| AAGGCAGCATACCTGGGATC+CGG | + | chr3.3:71191675-71191694 | None:intergenic | 55.0% | |
| ATCACCAGTTCCCCCCTATG+AGG | - | chr3.3:71190459-71190478 | MS.gene75619:intron | 55.0% | |
| CATACCTGGGATCCGGGTTT+GGG | + | chr3.3:71191668-71191687 | None:intergenic | 55.0% | |
| CCCCAGCTATTGGATCGCTA+TGG | - | chr3.3:71190882-71190901 | MS.gene75619:intron | 55.0% | |
| CCCTATTGGACCTGGAGCAA+TGG | - | chr3.3:71190914-71190933 | MS.gene75619:intron | 55.0% | |
| CTAGTGCCCTGCTAAGGCAA+GGG | + | chr3.3:71191416-71191435 | None:intergenic | 55.0% | |
| GAAGCCTCTTCAAGCTCCAC+AGG | - | chr3.3:71190348-71190367 | MS.gene75619:intron | 55.0% | |
| GGCCATAGCGATCCAATAGC+TGG | + | chr3.3:71190887-71190906 | None:intergenic | 55.0% | |
| GTAGCCGCAGGGAAGATGAT+TGG | - | chr3.3:71189684-71189703 | MS.gene75619:CDS | 55.0% | |
| TAGGCCTGTGGAGCTTGAAG+AGG | + | chr3.3:71190355-71190374 | None:intergenic | 55.0% | |
| TATGGAAGCCGTGTTCCTGC+TGG | - | chr3.3:71190517-71190536 | MS.gene75619:intron | 55.0% | |
| TCACACTTCCAGCTTCCCTC+CGG | + | chr3.3:71191953-71191972 | None:intergenic | 55.0% | |
| TGCGTAACTGCACCCAACCA+AGG | - | chr3.3:71189759-71189778 | MS.gene75619:intron | 55.0% | |
| TGCTGACAAGCCAGCTGAGT+CGG | - | chr3.3:71192030-71192049 | MS.gene75619:intron | 55.0% | |
| ! | TGGTAACGCACCATCAGTCC+TGG | + | chr3.3:71189263-71189282 | None:intergenic | 55.0% |
| !! | GGGGCGTTGGAGCCTAAATA+AGG | + | chr3.3:71190391-71190410 | None:intergenic | 55.0% |
| !! | TATGGCCTCGGTGTCCCTAT+TGG | - | chr3.3:71190900-71190919 | MS.gene75619:intron | 55.0% |
| ACCACGGCTCCACTGGTGTA+TGG | + | chr3.3:71190580-71190599 | None:intergenic | 60.0% | |
| ACCATACACCAGTGGAGCCG+TGG | - | chr3.3:71190576-71190595 | MS.gene75619:CDS | 60.0% | |
| ACCATCAGTCCTGGCACGCT+TGG | + | chr3.3:71189254-71189273 | None:intergenic | 60.0% | |
| AGGCAGCATACCTGGGATCC+GGG | + | chr3.3:71191674-71191693 | None:intergenic | 60.0% | |
| AGTGGAGCCGTGGTTGGACA+CGG | - | chr3.3:71190586-71190605 | MS.gene75619:CDS | 60.0% | |
| CAGGTCCAATAGGGACACCG+AGG | + | chr3.3:71190908-71190927 | None:intergenic | 60.0% | |
| CCTAGTGCCCTGCTAAGGCA+AGG | + | chr3.3:71191417-71191436 | None:intergenic | 60.0% | |
| GCATACCTGGGATCCGGGTT+TGG | + | chr3.3:71191669-71191688 | None:intergenic | 60.0% | |
| GCGATCCAATAGCTGGGGCA+TGG | + | chr3.3:71190880-71190899 | None:intergenic | 60.0% | |
| GCTCCACTGGTGTATGGTGC+TGG | + | chr3.3:71190574-71190593 | None:intergenic | 60.0% | |
| GCTGCGGATGAATAGGCCTG+TGG | + | chr3.3:71190367-71190386 | None:intergenic | 60.0% | |
| GGAACCTCATAGGGGGGAAC+TGG | + | chr3.3:71190466-71190485 | None:intergenic | 60.0% | |
| GGACCAGCACCATACACCAG+TGG | - | chr3.3:71190568-71190587 | MS.gene75619:CDS | 60.0% | |
| TACACCAGTGGAGCCGTGGT+TGG | - | chr3.3:71190580-71190599 | MS.gene75619:CDS | 60.0% | |
| ! | ACGGACTGCCAGCAGGAACA+CGG | + | chr3.3:71190528-71190547 | None:intergenic | 60.0% |
| ! | CCTTGCCTTAGCAGGGCACT+AGG | - | chr3.3:71191414-71191433 | MS.gene75619:CDS | 60.0% |
| ! | GGTCTATACGGACTGCCAGC+AGG | + | chr3.3:71190535-71190554 | None:intergenic | 60.0% |
| !! | CTCGGTGTCCCTATTGGACC+TGG | - | chr3.3:71190906-71190925 | MS.gene75619:intron | 60.0% |
| AGTCCTGGCACGCTTGGCAG+CGG | + | chr3.3:71189248-71189267 | None:intergenic | 65.0% | |
| CACACCCAAACCCGGATCCC+AGG | - | chr3.3:71191661-71191680 | MS.gene75619:intron | 65.0% | |
| CCTGGCCTAGTGCCCTGCTA+AGG | + | chr3.3:71191422-71191441 | None:intergenic | 65.0% | |
| GCCAAGCGTGCCAGGACTGA+TGG | - | chr3.3:71189250-71189269 | MS.gene75619:intron | 65.0% | |
| GTGTCCAACCACGGCTCCAC+TGG | + | chr3.3:71190587-71190606 | None:intergenic | 65.0% | |
| ! | CCTTAGCAGGGCACTAGGCC+AGG | - | chr3.3:71191419-71191438 | MS.gene75619:CDS | 65.0% |
| CTTCCGCTGCCAAGCGTGCC+AGG | - | chr3.3:71189242-71189261 | MS.gene75619:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 71188923 | 71192208 | 71188923 | ID=MS.gene75619 |
| chr3.3 | mRNA | 71188923 | 71192208 | 71188923 | ID=MS.gene75619.t1;Parent=MS.gene75619 |
| chr3.3 | exon | 71192200 | 71192208 | 71192200 | ID=MS.gene75619.t1.exon1;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71192200 | 71192208 | 71192200 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| chr3.3 | exon | 71191860 | 71191905 | 71191860 | ID=MS.gene75619.t1.exon2;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71191860 | 71191905 | 71191860 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| chr3.3 | exon | 71191332 | 71191447 | 71191332 | ID=MS.gene75619.t1.exon3;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71191332 | 71191447 | 71191332 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| chr3.3 | exon | 71190524 | 71190794 | 71190524 | ID=MS.gene75619.t1.exon4;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71190524 | 71190794 | 71190524 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| chr3.3 | exon | 71190196 | 71190266 | 71190196 | ID=MS.gene75619.t1.exon5;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71190196 | 71190266 | 71190196 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| chr3.3 | exon | 71189652 | 71189703 | 71189652 | ID=MS.gene75619.t1.exon6;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71189652 | 71189703 | 71189652 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| chr3.3 | exon | 71189449 | 71189558 | 71189449 | ID=MS.gene75619.t1.exon7;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71189449 | 71189558 | 71189449 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| chr3.3 | exon | 71189296 | 71189320 | 71189296 | ID=MS.gene75619.t1.exon8;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71189296 | 71189320 | 71189296 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| chr3.3 | exon | 71189041 | 71189192 | 71189041 | ID=MS.gene75619.t1.exon9;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71189041 | 71189192 | 71189041 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| chr3.3 | exon | 71188923 | 71188931 | 71188923 | ID=MS.gene75619.t1.exon10;Parent=MS.gene75619.t1 |
| chr3.3 | CDS | 71188923 | 71188931 | 71188923 | ID=cds.MS.gene75619.t1;Parent=MS.gene75619.t1 |
| Gene Sequence |
| Protein sequence |
