AlfalfaGEDB | MS.gene070901

M. sativa cultivar XinJiangDaYe / MS.gene070901

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016740 GO:0016757 GO:0016758
PFAM: PF00201.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene070901.t1	XP_003613028.1	88.4	146	17	0	1	146	329	474	3.70E-69	270.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene070901.t1	U5NH37	66.4	134	44	1	10	143	347	479	5.3e-48	191.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene070901.t1	G7JWC5	88.4	146	17	0	1	146	329	474	2.7e-69	270.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049297	MS.gene070901	0.83395	3.97E-56	-1.69E-46
MS.gene049669	MS.gene070901	0.804498	2.10E-49	-1.69E-46
MS.gene049825	MS.gene070901	0.805392	1.36E-49	-1.69E-46
MS.gene049873	MS.gene070901	0.813843	2.08E-51	-1.69E-46
MS.gene050201	MS.gene070901	0.807355	5.26E-50	-1.69E-46
MS.gene050228	MS.gene070901	0.807176	5.75E-50	-1.69E-46
MS.gene050303	MS.gene070901	0.80437	2.23E-49	-1.69E-46
MS.gene050330	MS.gene070901	-0.814442	1.54E-51	-1.69E-46
MS.gene050558	MS.gene070901	0.809046	2.30E-50	-1.69E-46
MS.gene050820	MS.gene070901	0.803814	2.91E-49	-1.69E-46
MS.gene051257	MS.gene070901	0.810446	1.15E-50	-1.69E-46
MS.gene051265	MS.gene070901	0.817544	3.12E-52	-1.69E-46
MS.gene052176	MS.gene070901	0.818819	1.61E-52	-1.69E-46
MS.gene052302	MS.gene070901	0.800923	1.15E-48	-1.69E-46
MS.gene052309	MS.gene070901	-0.825552	4.40E-54	-1.69E-46
MS.gene052358	MS.gene070901	-0.813193	2.90E-51	-1.69E-46
MS.gene052376	MS.gene070901	0.812876	3.40E-51	-1.69E-46
MS.gene052866	MS.gene070901	0.812791	3.55E-51	-1.69E-46
MS.gene052867	MS.gene070901	0.821738	3.44E-53	-1.69E-46
MS.gene053054	MS.gene070901	-0.83806	3.60E-57	-1.69E-46
MS.gene053221	MS.gene070901	0.800482	1.41E-48	-1.69E-46
MS.gene053294	MS.gene070901	0.811501	6.78E-51	-1.69E-46
MS.gene053953	MS.gene070901	0.82301	1.74E-53	-1.69E-46
MS.gene054942	MS.gene070901	0.838566	2.67E-57	-1.69E-46
MS.gene055356	MS.gene070901	0.819476	1.14E-52	-1.69E-46
MS.gene055357	MS.gene070901	0.823373	1.43E-53	-1.69E-46
MS.gene055358	MS.gene070901	0.82187	3.21E-53	-1.69E-46
MS.gene057060	MS.gene070901	0.837429	5.23E-57	-1.69E-46
MS.gene057414	MS.gene070901	0.804362	2.24E-49	-1.69E-46
MS.gene057967	MS.gene070901	0.802553	5.31E-49	-1.69E-46
MS.gene058037	MS.gene070901	0.800503	1.40E-48	-1.69E-46
MS.gene05954	MS.gene070901	0.846832	1.70E-59	-1.69E-46
MS.gene059569	MS.gene070901	0.823293	1.50E-53	-1.69E-46
MS.gene060137	MS.gene070901	-0.800202	1.61E-48	-1.69E-46
MS.gene060572	MS.gene070901	0.81283	3.48E-51	-1.69E-46
MS.gene061040	MS.gene070901	-0.868202	7.78E-66	-1.69E-46
MS.gene061114	MS.gene070901	-0.843281	1.54E-58	-1.69E-46
MS.gene061266	MS.gene070901	0.809206	2.12E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene070901.t1	MTR_5g031860	88.356	146	17	0	1	146	329	474	2.06e-93	278
MS.gene070901.t1	MTR_5g031840	86.301	146	20	0	1	146	321	466	3.88e-91	272
MS.gene070901.t1	MTR_5g031830	85.616	146	21	0	1	146	330	475	1.11e-90	271
MS.gene070901.t1	MTR_5g464810	51.493	134	60	4	8	139	345	475	3.16e-38	135
MS.gene070901.t1	MTR_5g064240	51.493	134	60	4	8	139	345	475	3.16e-38	135
MS.gene070901.t1	MTR_6g014300	46.721	122	64	1	19	139	342	463	1.55e-37	133
MS.gene070901.t1	MTR_0036s0220	50.000	134	62	4	8	139	345	475	4.99e-37	132
MS.gene070901.t1	MTR_6g014150	45.600	125	67	1	18	141	352	476	1.45e-36	130
MS.gene070901.t1	MTR_6g014270	45.600	125	67	1	18	141	354	478	1.60e-36	130
MS.gene070901.t1	MTR_0477s0010	42.308	130	74	1	13	141	187	316	3.16e-36	127
MS.gene070901.t1	MTR_5g464760	49.624	133	62	4	11	141	350	479	4.03e-36	129
MS.gene070901.t1	MTR_6g014190	42.400	125	71	1	18	141	162	286	4.71e-36	125
MS.gene070901.t1	MTR_8g007585	43.200	125	70	1	18	141	267	391	9.28e-36	127
MS.gene070901.t1	MTR_6g014220	44.000	125	69	1	18	141	353	477	1.30e-35	128
MS.gene070901.t1	MTR_0288s0020	43.846	130	72	1	13	141	331	460	1.31e-35	128
MS.gene070901.t1	MTR_7g011470	42.969	128	72	1	13	139	332	459	1.54e-35	127
MS.gene070901.t1	MTR_7g011470	42.969	128	72	1	13	139	336	463	1.66e-35	127
MS.gene070901.t1	MTR_6g014200	44.800	125	68	1	18	141	352	476	2.56e-35	127
MS.gene070901.t1	MTR_6g014310	44.094	127	70	1	13	138	351	477	2.68e-35	127
MS.gene070901.t1	MTR_6g013960	45.082	122	66	1	19	139	356	477	3.76e-35	127
MS.gene070901.t1	MTR_6g014050	42.520	127	72	1	16	141	354	480	3.92e-35	127
MS.gene070901.t1	MTR_6g013920	46.341	123	65	1	18	139	354	476	9.18e-35	126
MS.gene070901.t1	MTR_6g013990	44.715	123	67	1	18	139	353	475	1.40e-34	125
MS.gene070901.t1	MTR_6g013450	44.715	123	67	1	18	139	356	478	1.44e-34	125
MS.gene070901.t1	MTR_6g014187	43.200	125	70	1	18	141	355	479	1.92e-34	125
MS.gene070901.t1	MTR_6g014250	43.089	123	69	1	18	139	353	475	2.06e-34	125
MS.gene070901.t1	MTR_8g059425	44.000	125	69	1	18	141	353	477	3.78e-34	124
MS.gene070901.t1	MTR_6g013900	43.902	123	68	1	18	139	354	476	4.10e-34	124
MS.gene070901.t1	MTR_6g013440	40.769	130	76	1	13	141	351	480	8.39e-34	123
MS.gene070901.t1	MTR_4g094220	42.336	137	73	2	7	142	348	479	1.33e-33	122
MS.gene070901.t1	MTR_6g014170	43.200	125	70	1	18	141	337	461	1.37e-33	122
MS.gene070901.t1	MTR_8g043470	43.443	122	68	1	18	138	253	374	1.56e-33	121
MS.gene070901.t1	MTR_6g014290	41.463	123	71	1	18	139	353	475	1.79e-33	122
MS.gene070901.t1	MTR_5g066390	41.860	129	66	3	18	141	90	214	1.81e-33	117
MS.gene070901.t1	MTR_3g008010	41.463	123	71	1	18	139	353	475	2.59e-33	122
MS.gene070901.t1	MTR_6g014000	41.045	134	78	1	8	140	21	154	3.40e-33	122
MS.gene070901.t1	MTR_0891s0010	39.286	140	84	1	1	139	148	287	3.69e-33	118
MS.gene070901.t1	MTR_2086s0010	38.095	126	77	1	17	141	46	171	4.00e-33	115
MS.gene070901.t1	MTR_1996s0010	38.095	126	77	1	17	141	46	171	4.00e-33	115
MS.gene070901.t1	MTR_3g069710	44.094	127	70	1	18	143	327	453	5.82e-33	120
MS.gene070901.t1	MTR_5g058320	43.089	123	69	1	18	139	340	462	1.18e-32	120
MS.gene070901.t1	MTR_6g011340	43.200	125	70	1	18	141	355	479	1.91e-32	119
MS.gene070901.t1	MTR_6g014040	43.200	125	70	1	18	141	356	480	2.18e-32	119
MS.gene070901.t1	MTR_3g479520	42.857	126	71	1	17	141	357	482	7.07e-32	118
MS.gene070901.t1	MTR_4g064987	44.094	127	68	2	18	143	327	451	8.90e-32	117
MS.gene070901.t1	MTR_4g064987	44.094	127	68	2	18	143	321	445	8.97e-32	117
MS.gene070901.t1	MTR_3g069690	43.307	127	70	1	19	143	325	451	1.09e-31	117
MS.gene070901.t1	MTR_2g008210	44.800	125	67	2	16	138	349	473	3.60e-31	116
MS.gene070901.t1	MTR_6g014240	41.600	125	72	1	18	141	322	446	4.05e-31	115
MS.gene070901.t1	MTR_3g479470	43.200	125	70	1	16	139	353	477	8.30e-31	115
MS.gene070901.t1	MTR_3g479610	40.323	124	73	1	17	139	187	310	8.62e-31	112
MS.gene070901.t1	MTR_6g014020	40.800	125	73	1	18	141	355	479	8.93e-31	115
MS.gene070901.t1	MTR_1g107380	43.662	142	73	3	9	145	337	476	9.55e-31	115
MS.gene070901.t1	MTR_6g014185	41.270	126	72	2	16	139	217	342	1.98e-30	112
MS.gene070901.t1	MTR_3g079480	41.129	124	72	1	17	139	363	486	2.57e-30	114
MS.gene070901.t1	MTR_3g479490	39.024	123	74	1	17	138	348	470	4.13e-30	113
MS.gene070901.t1	MTR_7g102560	44.156	154	62	5	13	145	337	487	7.54e-30	112
MS.gene070901.t1	MTR_8g088560	38.926	149	85	3	2	144	312	460	1.03e-29	112
MS.gene070901.t1	MTR_8g012730	42.424	132	67	4	7	129	165	296	2.71e-29	108
MS.gene070901.t1	MTR_8g066610	42.282	149	75	3	8	145	333	481	9.37e-29	109
MS.gene070901.t1	MTR_4g485630	38.129	139	74	3	19	145	339	477	1.56e-28	108
MS.gene070901.t1	MTR_4g128720	40.769	130	75	2	16	143	328	457	1.68e-28	108
MS.gene070901.t1	MTR_7g080950	38.298	141	80	3	3	138	306	444	2.16e-28	108
MS.gene070901.t1	MTR_7g102450	39.744	156	76	3	4	141	316	471	3.15e-28	108
MS.gene070901.t1	MTR_4g031800	39.355	155	75	4	5	143	323	474	5.49e-28	107
MS.gene070901.t1	MTR_8g012650	42.857	133	67	4	7	130	328	460	6.57e-28	107
MS.gene070901.t1	MTR_8g012630	41.606	137	71	4	7	134	272	408	7.54e-28	106
MS.gene070901.t1	MTR_7g013220	37.879	132	68	2	19	142	326	451	7.63e-28	107
MS.gene070901.t1	MTR_7g080900	35.374	147	84	4	3	143	313	454	8.06e-28	107
MS.gene070901.t1	MTR_4g117950	39.103	156	76	4	3	142	311	463	1.21e-27	106
MS.gene070901.t1	MTR_0536s0020	38.994	159	78	5	3	142	322	480	1.92e-27	106
MS.gene070901.t1	MTR_6g038240	42.969	128	68	2	16	138	324	451	2.00e-27	105
MS.gene070901.t1	MTR_8g009050	42.969	128	67	3	16	137	335	462	2.29e-27	105
MS.gene070901.t1	MTR_5g035580	38.255	149	83	2	4	145	311	457	2.72e-27	105
MS.gene070901.t1	MTR_5g035560	38.312	154	78	3	7	145	304	455	4.35e-27	105
MS.gene070901.t1	MTR_8g012635	41.606	137	71	4	7	134	328	464	7.11e-27	104
MS.gene070901.t1	MTR_7g102490	37.838	148	70	4	13	141	342	486	8.05e-27	104
MS.gene070901.t1	MTR_6g038230	37.956	137	78	3	7	138	317	451	1.16e-26	103
MS.gene070901.t1	MTR_0536s0010	40.385	156	74	4	3	142	325	477	1.18e-26	103
MS.gene070901.t1	MTR_4g117960	38.365	159	79	5	3	142	323	481	1.20e-26	103
MS.gene070901.t1	MTR_1g062380	40.764	157	74	4	4	141	337	493	1.33e-26	103
MS.gene070901.t1	MTR_4g128690	39.716	141	78	3	5	143	319	454	1.65e-26	103
MS.gene070901.t1	MTR_8g008990	40.625	128	70	3	16	137	337	464	2.58e-26	102
MS.gene070901.t1	MTR_0536s0030	39.241	158	79	4	3	143	196	353	4.18e-26	101
MS.gene070901.t1	MTR_7g013240	35.714	126	75	2	19	140	315	438	4.21e-26	102
MS.gene070901.t1	MTR_4g485620	42.000	150	74	4	5	143	309	456	5.96e-26	102
MS.gene070901.t1	MTR_2g046820	42.857	126	66	2	20	139	335	460	6.07e-26	102
MS.gene070901.t1	MTR_7g102550	38.961	154	76	3	4	139	330	483	6.08e-26	102
MS.gene070901.t1	MTR_8g009055	40.625	128	70	3	16	137	335	462	7.68e-26	101
MS.gene070901.t1	MTR_3g084530	38.217	157	76	4	4	141	318	472	8.09e-26	101
MS.gene070901.t1	MTR_7g013200	34.921	126	76	3	19	140	315	438	8.39e-26	101
MS.gene070901.t1	MTR_5g070090	39.552	134	73	2	19	145	333	465	1.38e-25	100
MS.gene070901.t1	MTR_5g045970	37.805	164	79	4	4	146	336	497	1.49e-25	100
MS.gene070901.t1	MTR_4g117890	36.620	142	74	3	17	142	334	475	1.77e-25	100
MS.gene070901.t1	MTR_4g094920	38.129	139	76	3	5	138	343	476	1.97e-25	100
MS.gene070901.t1	MTR_7g117405	39.216	153	74	4	7	141	329	480	1.98e-25	100
MS.gene070901.t1	MTR_8g083280	37.594	133	75	2	17	141	329	461	2.18e-25	100
MS.gene070901.t1	MTR_4g117980	35.583	163	86	4	3	146	327	489	2.18e-25	100
MS.gene070901.t1	MTR_7g102520	39.241	158	79	3	4	144	334	491	2.18e-25	100
MS.gene070901.t1	MTR_2g035020	36.364	154	82	3	7	144	331	484	2.26e-25	100
MS.gene070901.t1	MTR_4g485640	39.416	137	68	3	18	139	528	664	2.41e-25	100
MS.gene070901.t1	MTR_8g012745	40.152	132	69	5	8	130	327	457	2.52e-25	100
MS.gene070901.t1	MTR_6g038220	36.719	128	76	2	16	138	323	450	2.63e-25	100
MS.gene070901.t1	MTR_8g083290	38.462	130	72	2	17	138	331	460	2.64e-25	100
MS.gene070901.t1	MTR_8g009840	39.098	133	75	3	16	143	396	527	3.09e-25	100
MS.gene070901.t1	MTR_6g038200	36.719	128	76	2	16	138	324	451	3.27e-25	99.8
MS.gene070901.t1	MTR_4g118000	38.710	155	76	4	4	142	316	467	3.29e-25	99.8
MS.gene070901.t1	MTR_0184s0030	40.152	132	68	4	5	130	330	456	4.51e-25	99.4
MS.gene070901.t1	MTR_4g024020	34.337	166	84	4	1	141	322	487	4.68e-25	99.8
MS.gene070901.t1	MTR_7g013260	35.714	126	75	2	19	140	316	439	5.06e-25	99.4
MS.gene070901.t1	MTR_7g102460	37.324	142	67	4	19	141	346	484	8.47e-25	99.0
MS.gene070901.t1	MTR_2g035040	35.256	156	85	3	3	142	232	387	8.60e-25	98.2
MS.gene070901.t1	MTR_5g067170	37.107	159	81	4	7	146	329	487	1.02e-24	98.6
MS.gene070901.t1	MTR_6g035295	36.957	138	72	2	21	143	349	486	1.17e-24	98.6
MS.gene070901.t1	MTR_2g034990	36.842	152	80	3	7	142	331	482	1.33e-24	98.2
MS.gene070901.t1	MTR_3g084520	40.441	136	75	2	12	141	337	472	1.46e-24	98.2
MS.gene070901.t1	MTR_7g071040	36.538	156	82	4	5	143	337	492	1.46e-24	98.2
MS.gene070901.t1	MTR_6g038300	39.259	135	76	3	9	138	319	452	1.52e-24	97.8
MS.gene070901.t1	MTR_8g006260	44.628	121	61	2	16	130	338	458	1.75e-24	97.8
MS.gene070901.t1	MTR_8g006730	39.844	128	70	3	17	137	335	462	2.21e-24	97.4
MS.gene070901.t1	MTR_8g077590	39.231	130	73	3	14	137	333	462	2.67e-24	97.4
MS.gene070901.t1	MTR_7g117170	40.458	131	66	5	16	137	344	471	2.84e-24	97.4
MS.gene070901.t1	MTR_3g009510	39.695	131	72	4	16	139	344	474	3.02e-24	97.4
MS.gene070901.t1	MTR_2g040530	41.732	127	66	3	20	139	337	462	3.12e-24	97.1
MS.gene070901.t1	MTR_7g012120	35.526	152	82	3	7	142	333	484	3.71e-24	97.1
MS.gene070901.t1	MTR_5g090580	38.406	138	72	4	16	141	338	474	3.79e-24	97.1
MS.gene070901.t1	MTR_5g090670	38.129	139	71	4	16	141	340	476	3.82e-24	97.1
MS.gene070901.t1	MTR_5g098930	37.500	152	75	5	7	141	319	467	3.98e-24	97.1
MS.gene070901.t1	MTR_8g009063	37.500	128	74	3	16	137	342	469	4.13e-24	97.1
MS.gene070901.t1	MTR_1g019510	36.429	140	80	4	7	137	320	459	4.33e-24	96.7
MS.gene070901.t1	MTR_6g488280	39.535	129	71	3	16	137	332	460	4.36e-24	96.7
MS.gene070901.t1	MTR_0428s0010	39.535	129	71	3	16	137	332	460	4.36e-24	96.7
MS.gene070901.t1	MTR_6g035265	37.681	138	71	3	17	139	334	471	4.51e-24	96.7
MS.gene070901.t1	MTR_3g009490	35.878	131	77	3	16	139	56	186	4.79e-24	92.4
MS.gene070901.t1	MTR_5g090610	37.410	139	74	4	16	142	324	461	4.98e-24	96.7
MS.gene070901.t1	MTR_2g046750	41.270	126	68	2	20	139	338	463	5.31e-24	96.7
MS.gene070901.t1	MTR_5g029800	36.000	150	80	3	9	142	329	478	5.78e-24	96.7
MS.gene070901.t1	MTR_3g049970	36.429	140	80	2	11	143	334	471	5.97e-24	96.3
MS.gene070901.t1	MTR_8g008970	39.062	128	72	3	16	137	657	784	5.99e-24	96.7
MS.gene070901.t1	MTR_8g008970	37.500	128	74	3	16	137	333	460	5.77e-22	91.3
MS.gene070901.t1	MTR_7g070610	36.709	158	82	5	4	143	331	488	6.61e-24	96.3
MS.gene070901.t1	MTR_4g108250	35.032	157	85	4	4	143	333	489	8.24e-24	96.3
MS.gene070901.t1	MTR_1g107365	36.496	137	80	3	11	142	358	492	9.40e-24	95.9
MS.gene070901.t1	MTR_7g070995	35.461	141	75	3	19	143	6	146	1.12e-23	90.5
MS.gene070901.t1	MTR_5g040030	33.974	156	87	4	4	143	334	489	1.29e-23	95.5
MS.gene070901.t1	MTR_1g107375	33.577	137	84	3	11	142	320	454	1.62e-23	95.1
MS.gene070901.t1	MTR_5g045960	37.821	156	79	4	4	141	330	485	2.61e-23	94.7
MS.gene070901.t1	MTR_1g019520	36.719	128	75	3	16	137	81	208	2.69e-23	91.3
MS.gene070901.t1	MTR_6g005600	37.313	134	78	3	16	143	336	469	2.87e-23	94.4
MS.gene070901.t1	MTR_6g023665	37.984	129	73	3	16	137	339	467	2.87e-23	94.4
MS.gene070901.t1	MTR_4g095008	36.691	139	78	3	5	138	328	461	3.20e-23	94.7
MS.gene070901.t1	MTR_5g090700	37.313	134	71	4	20	141	344	476	3.91e-23	94.4
MS.gene070901.t1	MTR_8g006710	39.535	129	71	3	16	137	333	461	4.09e-23	94.0
MS.gene070901.t1	MTR_7g080935	33.557	149	92	3	3	146	311	457	4.16e-23	94.0
MS.gene070901.t1	MTR_7g070810	34.591	159	85	4	4	143	319	477	4.34e-23	94.0
MS.gene070901.t1	MTR_3g084540	38.346	133	75	2	20	145	345	477	4.40e-23	94.0
MS.gene070901.t1	MTR_6g033660	37.500	128	74	3	16	137	332	459	4.52e-23	94.0
MS.gene070901.t1	MTR_5g090630	36.957	138	74	4	16	141	329	465	4.91e-23	94.0
MS.gene070901.t1	MTR_7g080940	34.932	146	85	4	3	143	311	451	6.04e-23	93.6
MS.gene070901.t1	MTR_8g064870	35.294	136	79	3	16	143	341	475	6.38e-23	93.6
MS.gene070901.t1	MTR_1g107360	36.765	136	77	3	11	139	326	459	6.89e-23	93.6
MS.gene070901.t1	MTR_7g013180	33.607	122	75	2	19	136	323	442	7.07e-23	93.2
MS.gene070901.t1	MTR_1g107350	35.971	139	80	3	11	142	333	469	7.80e-23	93.2
MS.gene070901.t1	MTR_7g070940	37.324	142	73	3	18	143	333	474	9.56e-23	93.2
MS.gene070901.t1	MTR_8g044140	33.333	156	88	4	4	143	295	450	1.12e-22	92.8
MS.gene070901.t1	MTR_6g033725	36.806	144	82	4	3	137	314	457	1.27e-22	92.8
MS.gene070901.t1	MTR_8g009067	36.923	130	74	4	16	138	215	343	1.30e-22	91.7
MS.gene070901.t1	MTR_1g107325	35.075	134	80	2	16	142	220	353	1.43e-22	91.7
MS.gene070901.t1	MTR_6g033625	36.735	147	84	4	2	139	316	462	1.46e-22	92.4
MS.gene070901.t1	MTR_6g035185	35.294	153	82	3	7	142	331	483	1.85e-22	92.4
MS.gene070901.t1	MTR_5g090600	35.507	138	76	4	16	141	317	453	1.99e-22	92.0
MS.gene070901.t1	MTR_7g070800	35.669	157	84	4	4	143	321	477	2.15e-22	92.0
MS.gene070901.t1	MTR_8g009073	50.000	82	39	2	17	97	205	285	2.17e-22	90.9
MS.gene070901.t1	MTR_2g059240	37.405	131	70	4	19	141	342	468	2.31e-22	92.0
MS.gene070901.t1	MTR_6g033615	35.374	147	86	3	2	139	302	448	2.36e-22	92.0
MS.gene070901.t1	MTR_8g090095	38.462	130	72	3	20	141	350	479	2.44e-22	92.0
MS.gene070901.t1	MTR_8g009067	36.923	130	74	4	16	138	333	461	3.14e-22	91.7
MS.gene070901.t1	MTR_7g070740	35.256	156	84	4	5	143	330	485	3.17e-22	91.7
MS.gene070901.t1	MTR_8g009073	50.000	82	39	2	17	97	334	414	4.31e-22	91.3
MS.gene070901.t1	MTR_8g032950	35.570	149	80	3	12	144	335	483	6.13e-22	90.9
MS.gene070901.t1	MTR_7g070780	34.810	158	84	6	4	143	329	485	8.80e-22	90.5
MS.gene070901.t1	MTR_8g006270	32.847	137	87	1	7	138	324	460	9.53e-22	90.1
MS.gene070901.t1	MTR_7g039550	35.036	137	75	2	21	143	127	263	1.07e-21	88.2
MS.gene070901.t1	MTR_5g070040	39.310	145	67	6	9	138	325	463	1.20e-21	90.1
MS.gene070901.t1	MTR_1g107315	33.557	149	91	3	2	143	323	470	1.33e-21	89.7
MS.gene070901.t1	MTR_5g090660	35.507	138	76	4	16	141	336	472	1.44e-21	89.7
MS.gene070901.t1	MTR_1g040310	34.307	137	76	2	21	143	349	485	1.51e-21	89.7
MS.gene070901.t1	MTR_5g016660	33.544	158	88	3	3	143	328	485	1.64e-21	89.7
MS.gene070901.t1	MTR_8g027885	38.017	121	69	3	16	130	341	461	1.71e-21	89.7
MS.gene070901.t1	MTR_8g027870	38.017	121	69	3	16	130	341	461	1.79e-21	89.4
MS.gene070901.t1	MTR_0009s0240	34.507	142	87	3	6	142	319	459	2.67e-21	89.0
MS.gene070901.t1	MTR_0184s0040	33.594	128	79	3	16	137	349	476	2.75e-21	89.0
MS.gene070901.t1	MTR_0078s0190	33.594	128	79	3	16	137	349	476	2.75e-21	89.0
MS.gene070901.t1	MTR_7g070660	34.177	158	86	4	4	143	324	481	2.97e-21	89.0
MS.gene070901.t1	MTR_5g090620	33.582	134	76	4	20	141	343	475	4.29e-21	88.6
MS.gene070901.t1	MTR_5g098960	40.659	91	54	0	11	101	319	409	5.15e-21	88.2
MS.gene070901.t1	MTR_7g070860	33.987	153	85	3	7	143	312	464	5.53e-21	88.2
MS.gene070901.t1	MTR_1g029540	33.803	142	87	2	7	141	318	459	6.81e-21	87.8
MS.gene070901.t1	MTR_6g014160	62.745	51	19	0	18	68	307	357	7.31e-21	87.4
MS.gene070901.t1	MTR_7g046490	36.434	129	76	3	16	138	332	460	9.38e-21	87.4
MS.gene070901.t1	MTR_5g072860	34.615	130	76	3	18	138	333	462	9.41e-21	87.4
MS.gene070901.t1	MTR_8g465670	36.765	136	71	5	16	138	334	467	1.02e-20	87.4
MS.gene070901.t1	MTR_8g071070	34.507	142	87	3	6	142	329	469	1.03e-20	87.4
MS.gene070901.t1	MTR_5g039900	34.307	137	76	2	21	143	349	485	1.13e-20	87.4
MS.gene070901.t1	MTR_7g070930	33.974	156	86	4	5	143	334	489	1.23e-20	87.0
MS.gene070901.t1	MTR_1g032490	33.784	148	86	2	2	142	329	471	1.25e-20	87.0
MS.gene070901.t1	MTR_7g047030	40.777	103	53	3	8	102	323	425	1.29e-20	87.0
MS.gene070901.t1	MTR_7g047270	40.777	103	53	3	8	102	323	425	1.29e-20	87.0
MS.gene070901.t1	MTR_4g008630	33.803	142	87	2	7	141	321	462	4.11e-20	85.5
MS.gene070901.t1	MTR_0078s0010	35.211	142	78	5	8	137	323	462	4.49e-20	85.5
MS.gene070901.t1	MTR_6g033675	35.156	128	77	3	16	137	333	460	5.92e-20	85.1
MS.gene070901.t1	MTR_0078s0060	33.571	140	83	5	8	137	322	461	6.90e-20	85.1
MS.gene070901.t1	MTR_7g070910	33.333	156	87	4	5	143	331	486	6.90e-20	85.1
MS.gene070901.t1	MTR_8g006220	47.222	72	37	1	16	86	341	412	9.25e-20	84.7
MS.gene070901.t1	MTR_7g055710	34.211	152	83	4	4	138	329	480	2.47e-19	83.6
MS.gene070901.t1	MTR_5g072810	35.036	137	78	2	18	143	319	455	2.70e-19	83.2
MS.gene070901.t1	MTR_4g485590	50.633	79	35	2	11	85	303	381	3.91e-19	82.8
MS.gene070901.t1	MTR_5g004940	30.534	131	77	2	16	145	264	381	4.13e-19	82.4
MS.gene070901.t1	MTR_8g056740	51.163	86	39	3	3	87	220	303	4.40e-19	82.4
MS.gene070901.t1	MTR_1g107285	32.143	140	85	3	11	142	327	464	5.21e-19	82.4
MS.gene070901.t1	MTR_4g082820	36.923	130	73	4	17	139	334	461	6.78e-19	82.0
MS.gene070901.t1	MTR_8g466240	35.714	126	74	3	19	139	328	451	7.33e-19	82.0
MS.gene070901.t1	MTR_7g080960	34.646	127	66	3	17	143	360	469	7.96e-19	82.0
MS.gene070901.t1	MTR_8g064880	38.095	105	55	3	11	108	340	441	9.71e-19	81.6
MS.gene070901.t1	MTR_5g016480	31.655	139	85	3	5	138	334	467	2.62e-18	80.5
MS.gene070901.t1	MTR_5g019580	35.385	130	70	5	16	134	369	495	4.18e-18	80.1
MS.gene070901.t1	MTR_5g019580	35.385	130	70	5	16	134	345	471	5.48e-18	79.7
MS.gene070901.t1	MTR_5g072830	34.307	137	79	2	18	143	314	450	1.21e-17	78.6
MS.gene070901.t1	MTR_8g074550	32.432	148	85	5	9	141	341	488	2.41e-17	77.8
MS.gene070901.t1	MTR_5g075440	30.556	144	89	3	4	138	311	452	2.49e-17	77.8
MS.gene070901.t1	MTR_7g070870	34.722	144	81	4	4	143	326	460	2.92e-17	77.4
MS.gene070901.t1	MTR_5g072840	34.307	137	79	2	18	143	314	450	3.10e-17	77.4
MS.gene070901.t1	MTR_5g072820	34.559	136	78	2	19	143	315	450	6.57e-17	76.6
MS.gene070901.t1	MTR_7g071050	32.609	138	76	4	4	124	285	422	1.98e-16	75.1
MS.gene070901.t1	MTR_7g470610	43.902	82	44	2	4	83	186	267	3.01e-16	73.6
MS.gene070901.t1	MTR_7g070583	43.902	82	44	2	4	83	186	267	3.01e-16	73.6
MS.gene070901.t1	MTR_5g087620	31.852	135	81	3	18	141	359	493	3.20e-16	74.7
MS.gene070901.t1	MTR_0475s0030	47.059	68	35	1	37	104	13	79	6.83e-16	68.9
MS.gene070901.t1	MTR_4g082810	48.333	60	30	1	17	75	336	395	1.79e-15	72.4
MS.gene070901.t1	MTR_3g031450	32.061	131	80	2	20	141	321	451	2.02e-15	72.4
MS.gene070901.t1	MTR_5g027210	32.203	118	62	3	19	118	358	475	3.61e-15	71.6
MS.gene070901.t1	MTR_3g031400	32.061	131	80	2	20	141	319	449	8.06e-15	70.5
MS.gene070901.t1	MTR_2g098430	45.070	71	38	1	8	77	332	402	2.48e-14	69.3
MS.gene070901.t1	MTR_6g078320	34.454	119	69	4	18	129	351	467	1.61e-13	67.0
MS.gene070901.t1	MTR_7g067330	31.452	124	65	3	11	133	295	399	2.40e-13	66.2
MS.gene070901.t1	MTR_7g067120	34.862	109	66	3	11	115	295	402	2.62e-13	66.2
MS.gene070901.t1	MTR_8g068360	43.662	71	39	1	8	77	328	398	6.86e-13	65.1
MS.gene070901.t1	MTR_6g015160	49.020	51	25	1	37	86	30	80	1.17e-12	60.5
MS.gene070901.t1	MTR_5g072850	33.871	124	62	3	20	138	270	378	2.58e-12	63.2
MS.gene070901.t1	MTR_6g013680	32.456	114	49	3	29	141	288	374	4.16e-12	62.8
MS.gene070901.t1	MTR_7g070760	43.077	65	37	0	21	85	137	201	4.29e-12	61.2
MS.gene070901.t1	MTR_8g068340	43.662	71	39	1	8	77	329	399	1.16e-11	61.6
MS.gene070901.t1	MTR_2g014900	31.633	98	61	2	16	107	322	419	3.14e-11	60.1
MS.gene070901.t1	MTR_8g007650	38.983	59	35	1	18	75	337	395	9.40e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene070901.t1	AT5G05900	51.200	125	60	1	18	141	323	447	1.77e-39	138
MS.gene070901.t1	AT5G05880	49.606	127	63	1	18	143	324	450	5.85e-38	134
MS.gene070901.t1	AT5G05890	48.819	127	64	1	18	143	328	454	2.15e-37	132
MS.gene070901.t1	AT3G11340	43.357	143	75	2	2	143	309	446	8.72e-37	130
MS.gene070901.t1	AT3G46660	44.882	127	69	1	18	143	331	457	1.46e-35	127
MS.gene070901.t1	AT1G78270	47.101	138	64	4	16	144	352	489	1.09e-33	123
MS.gene070901.t1	AT1G22400	45.600	125	66	2	16	138	354	478	1.36e-33	123
MS.gene070901.t1	AT3G46670	44.444	126	69	1	19	143	325	450	1.69e-33	122
MS.gene070901.t1	AT1G22380	43.750	128	70	2	16	141	353	480	1.74e-33	122
MS.gene070901.t1	AT5G05870	48.387	124	63	1	19	141	331	454	7.04e-33	120
MS.gene070901.t1	AT5G05860	44.928	138	70	2	5	141	315	447	8.49e-33	120
MS.gene070901.t1	AT5G38010	44.000	125	69	1	18	141	329	453	1.21e-32	120
MS.gene070901.t1	AT5G59580	42.857	126	71	1	18	142	323	448	1.62e-31	117
MS.gene070901.t1	AT5G38040	38.298	141	83	2	2	141	312	449	1.13e-30	114
MS.gene070901.t1	AT2G26480	38.971	136	82	1	7	141	310	445	1.32e-30	114
MS.gene070901.t1	AT3G46720	40.945	127	74	1	18	143	316	442	2.71e-30	113
MS.gene070901.t1	AT1G22360	43.411	129	71	2	15	141	349	477	7.51e-30	112
MS.gene070901.t1	AT3G55710	42.188	128	71	2	18	143	330	456	9.33e-30	112
MS.gene070901.t1	AT5G17040	42.424	132	66	3	16	141	210	337	1.09e-29	110
MS.gene070901.t1	AT5G59590	41.803	122	70	1	18	138	325	446	1.40e-29	111
MS.gene070901.t1	AT5G17040	40.940	149	74	5	2	141	296	439	2.39e-29	110
MS.gene070901.t1	AT1G22340	43.750	128	70	2	16	141	354	481	5.91e-29	110
MS.gene070901.t1	AT5G17030	39.568	139	79	3	8	141	317	455	8.70e-29	109
MS.gene070901.t1	AT3G55700	40.945	127	74	1	18	143	326	452	9.81e-29	109
MS.gene070901.t1	AT3G02100	42.857	126	67	2	22	143	337	461	1.11e-28	109
MS.gene070901.t1	AT3G46700	40.157	127	75	1	18	143	320	446	1.19e-28	109
MS.gene070901.t1	AT3G53160	38.000	150	76	3	13	145	337	486	1.63e-28	109
MS.gene070901.t1	AT5G17050	39.310	145	82	4	2	141	313	456	2.96e-28	108
MS.gene070901.t1	AT3G46680	40.164	122	72	1	18	138	325	446	5.19e-28	107
MS.gene070901.t1	AT4G15480	36.054	147	87	1	2	141	332	478	5.35e-28	107
MS.gene070901.t1	AT4G15550	37.209	129	73	1	18	138	342	470	8.47e-28	107
MS.gene070901.t1	AT1G22360	44.531	128	59	4	15	141	349	465	1.18e-27	106
MS.gene070901.t1	AT1G22370	42.188	128	72	2	16	141	178	305	2.16e-27	103
MS.gene070901.t1	AT2G43840	36.301	146	87	2	3	142	302	447	2.21e-27	105
MS.gene070901.t1	AT2G43840	36.301	146	87	2	3	142	302	447	2.32e-27	105
MS.gene070901.t1	AT5G26310	44.915	118	60	3	16	128	335	452	2.87e-27	105
MS.gene070901.t1	AT2G15490	39.860	143	75	4	7	139	334	475	3.92e-27	105
MS.gene070901.t1	AT2G15490	39.860	143	75	4	7	139	337	478	4.32e-27	105
MS.gene070901.t1	AT2G43820	34.694	147	90	2	3	143	302	448	6.79e-27	104
MS.gene070901.t1	AT2G36760	36.774	155	78	3	11	145	342	496	8.57e-27	104
MS.gene070901.t1	AT1G05680	42.063	126	68	2	18	138	324	449	1.57e-26	103
MS.gene070901.t1	AT1G22370	42.188	128	72	2	16	141	348	475	1.78e-26	103
MS.gene070901.t1	AT1G05675	42.063	126	68	2	18	138	324	449	2.52e-26	102
MS.gene070901.t1	AT3G46690	39.370	127	76	1	18	143	325	451	2.79e-26	102
MS.gene070901.t1	AT2G36780	36.986	146	75	3	13	141	343	488	2.81e-26	103
MS.gene070901.t1	AT2G36790	36.986	146	75	4	13	141	342	487	3.12e-26	102
MS.gene070901.t1	AT2G36800	36.986	146	75	3	13	141	342	487	4.60e-26	102
MS.gene070901.t1	AT4G34138	39.189	148	78	3	2	139	331	476	2.72e-25	100
MS.gene070901.t1	AT2G36750	35.915	142	74	3	17	141	342	483	2.99e-25	100
MS.gene070901.t1	AT2G15480	35.862	145	84	2	4	139	334	478	3.57e-25	99.8
MS.gene070901.t1	AT5G66690	44.068	118	61	3	16	128	335	452	3.74e-25	99.8
MS.gene070901.t1	AT2G36770	36.301	146	76	3	13	141	343	488	3.80e-25	99.8
MS.gene070901.t1	AT3G46650	37.600	125	77	1	18	141	308	432	1.19e-24	98.2
MS.gene070901.t1	AT2G31790	33.088	136	86	2	11	141	321	456	1.43e-24	98.2
MS.gene070901.t1	AT2G23260	36.496	137	81	3	11	141	317	453	1.88e-24	97.8
MS.gene070901.t1	AT2G15480	34.194	155	83	2	4	139	334	488	2.03e-24	97.8
MS.gene070901.t1	AT1G05560	35.714	140	81	2	6	141	317	451	2.04e-24	97.8
MS.gene070901.t1	AT2G31750	35.115	131	78	2	18	141	324	454	2.23e-24	97.4
MS.gene070901.t1	AT2G31750	35.115	131	78	2	18	141	324	454	2.30e-24	97.8
MS.gene070901.t1	AT1G05560	35.714	140	81	2	6	141	367	501	2.41e-24	97.8
MS.gene070901.t1	AT2G23250	36.913	149	87	4	3	144	290	438	3.59e-24	96.7
MS.gene070901.t1	AT1G05530	35.000	140	82	2	6	141	320	454	6.03e-24	96.3
MS.gene070901.t1	AT2G30140	34.694	147	84	3	8	145	311	454	6.06e-24	96.3
MS.gene070901.t1	AT2G30140	34.694	147	84	3	8	145	312	455	6.34e-24	96.3
MS.gene070901.t1	AT1G30530	39.062	128	76	2	16	141	323	450	4.56e-23	94.0
MS.gene070901.t1	AT3G16520	37.143	140	81	3	5	139	320	457	5.68e-23	93.6
MS.gene070901.t1	AT3G50740	40.833	120	64	3	16	128	340	459	6.42e-23	93.6
MS.gene070901.t1	AT4G36770	37.391	115	67	3	16	125	333	447	8.03e-23	93.2
MS.gene070901.t1	AT1G24100	35.664	143	83	3	8	141	316	458	9.63e-23	93.2
MS.gene070901.t1	AT2G29730	28.676	136	89	1	19	146	332	467	1.90e-22	92.0
MS.gene070901.t1	AT2G29710	28.477	151	100	1	2	144	315	465	2.51e-22	92.0
MS.gene070901.t1	AT4G34131	35.294	153	87	4	2	143	330	481	2.61e-22	92.0
MS.gene070901.t1	AT4G14090	35.664	143	82	4	3	138	313	452	2.79e-22	91.7
MS.gene070901.t1	AT1G07250	37.313	134	71	3	7	130	331	461	2.80e-22	91.7
MS.gene070901.t1	AT1G73880	36.154	130	77	3	19	143	340	468	4.92e-22	91.3
MS.gene070901.t1	AT4G15490	35.172	145	82	3	1	138	324	463	5.17e-22	90.9
MS.gene070901.t1	AT1G01420	41.593	113	60	3	16	124	336	446	5.41e-22	90.9
MS.gene070901.t1	AT4G15500	35.659	129	76	1	17	138	331	459	7.95e-22	90.5
MS.gene070901.t1	AT1G01420	40.708	113	61	3	16	124	339	449	1.08e-21	90.1
MS.gene070901.t1	AT4G01070	36.800	125	73	3	16	134	336	460	1.43e-21	89.7
MS.gene070901.t1	AT3G21560	34.028	144	84	2	3	139	331	470	1.61e-21	89.7
MS.gene070901.t1	AT2G36970	35.115	131	82	2	16	143	342	472	3.68e-21	88.6
MS.gene070901.t1	AT2G30150	34.266	143	82	3	8	141	297	436	7.92e-21	87.4
MS.gene070901.t1	AT2G30150	34.266	143	82	3	8	141	313	452	8.06e-21	87.8
MS.gene070901.t1	AT4G34135	38.514	148	79	3	8	143	336	483	9.86e-21	87.4
MS.gene070901.t1	AT3G16520	42.718	103	54	2	5	102	320	422	1.20e-20	87.0
MS.gene070901.t1	AT3G16520	42.718	103	54	2	5	102	320	422	1.41e-20	87.0
MS.gene070901.t1	AT2G18570	38.462	130	67	4	16	134	332	459	1.46e-20	87.0
MS.gene070901.t1	AT3G53150	34.375	160	78	4	7	139	348	507	4.73e-20	85.5
MS.gene070901.t1	AT5G14860	35.766	137	78	4	13	139	337	473	7.16e-20	85.1
MS.gene070901.t1	AT4G15260	32.075	159	87	3	1	139	195	352	8.89e-20	84.0
MS.gene070901.t1	AT2G29740	33.594	128	74	3	20	138	346	471	9.66e-20	84.7
MS.gene070901.t1	AT2G28080	36.752	117	70	3	4	116	333	449	1.65e-19	84.0
MS.gene070901.t1	AT1G01390	53.968	63	28	1	16	77	353	415	6.47e-19	82.4
MS.gene070901.t1	AT1G01390	53.968	63	28	1	16	77	336	398	7.45e-19	82.0
MS.gene070901.t1	AT1G07260	33.099	142	82	3	7	138	330	468	1.13e-18	81.6
MS.gene070901.t1	AT2G29750	31.783	129	78	2	18	138	344	470	1.54e-18	81.3
MS.gene070901.t1	AT3G21760	34.559	136	76	3	16	139	344	478	2.05e-18	80.9
MS.gene070901.t1	AT1G06000	31.579	133	81	4	13	138	301	430	3.38e-18	80.1
MS.gene070901.t1	AT2G18560	35.385	130	71	4	16	134	242	369	4.46e-18	79.7
MS.gene070901.t1	AT4G15280	30.882	136	81	2	16	139	369	503	5.04e-18	79.7
MS.gene070901.t1	AT4G15280	30.882	136	81	2	16	139	337	471	5.37e-18	79.7
MS.gene070901.t1	AT2G16890	33.083	133	79	4	17	139	333	465	1.16e-17	78.6
MS.gene070901.t1	AT3G22250	39.744	78	47	0	16	93	339	416	1.32e-17	78.6
MS.gene070901.t1	AT3G21790	33.571	140	77	4	16	141	341	478	1.46e-17	78.6
MS.gene070901.t1	AT3G21800	47.059	85	40	2	5	86	324	406	2.87e-17	77.8
MS.gene070901.t1	AT3G21750	32.168	143	84	2	16	146	332	473	3.10e-17	77.4
MS.gene070901.t1	AT1G07240	34.307	137	79	3	16	141	339	475	5.04e-17	77.0
MS.gene070901.t1	AT5G03490	33.083	133	83	3	13	139	328	460	1.08e-16	75.9
MS.gene070901.t1	AT2G16890	47.059	68	35	1	17	83	333	400	1.07e-15	73.2
MS.gene070901.t1	AT1G51210	35.537	121	73	2	2	117	313	433	1.08e-15	73.2
MS.gene070901.t1	AT1G10400	34.109	129	77	4	18	138	331	459	2.79e-15	72.0
MS.gene070901.t1	AT3G21780	31.618	136	80	4	16	139	332	466	2.81e-15	72.0
MS.gene070901.t1	AT5G12890	35.135	148	79	7	5	138	334	478	7.59e-15	70.9
MS.gene070901.t1	AT5G65550	44.286	70	37	2	17	85	332	400	1.23e-12	64.3
MS.gene070901.t1	AT5G49690	45.902	61	32	1	16	75	324	384	2.82e-12	63.2
MS.gene070901.t1	AT1G64910	32.500	80	53	1	8	86	300	379	7.87e-11	59.3

Find 38 sgRNAs with CRISPR-Local

Find 45 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTATATACTGAATCAAATTT+TGG	0.160775	5.4:-21707208	None:intergenic
TGCTATTGAAATGGCGGATT+TGG	0.219461	5.4:+21707142	MS.gene070901:CDS
ATTTGTTGATCAGCAAAATA+AGG	0.280250	5.4:-21706993	None:intergenic
GTGAGTGAGGTTTGGAGAAT+TGG	0.287683	5.4:+21707029	MS.gene070901:CDS
CCAAACATGGTACAAGAAAA+AGG	0.313624	5.4:+21706801	None:intergenic
AAAATTTGATTCAGTATATA+AGG	0.317414	5.4:+21707210	MS.gene070901:CDS
CTGATCAACAAATTAATAGT+AGG	0.360356	5.4:+21707003	MS.gene070901:CDS
CCACCCACTATGTGTCAAAA+AGG	0.361214	5.4:-21706922	None:intergenic
TGAGTGAGGTTTGGAGAATT+GGG	0.369652	5.4:+21707030	MS.gene070901:CDS
TAGGAATGTTGTTGAGAAAA+TGG	0.389004	5.4:+21707076	MS.gene070901:CDS
GTAGGTTTGTGAGTGAGGTT+TGG	0.393510	5.4:+21707021	MS.gene070901:CDS
TTCAAGATCTGCTATTGAAA+TGG	0.395191	5.4:+21707133	MS.gene070901:CDS
GAGAATTGGGTTGGATATGA+AGG	0.449432	5.4:+21707043	MS.gene070901:CDS
GAAAGGGATGATTGTGGGGT+GGG	0.454518	5.4:+21706860	MS.gene070901:CDS
ACTTTGGAGAGTGTGATTTG+TGG	0.454735	5.4:+21706951	MS.gene070901:CDS
AAATAAGGCCAACATATCAT+AGG	0.459700	5.4:-21706978	None:intergenic
TTGTTGTAGGAGGAACCATT+AGG	0.462958	5.4:-21707182	None:intergenic
TCCAAGAGTGTAAGTCCTAA+TGG	0.463911	5.4:+21707167	MS.gene070901:CDS
AAAGAGAAAGGGATGATTGT+GGG	0.472351	5.4:+21706855	MS.gene070901:CDS
TAATAGTAGGTTTGTGAGTG+AGG	0.474155	5.4:+21707016	MS.gene070901:CDS
ACCATTAGGACTTACACTCT+TGG	0.484150	5.4:-21707168	None:intergenic
GAAGGGACTACTAAAGAGAA+AGG	0.498754	5.4:+21706843	MS.gene070901:CDS
TGAGGTTTGGAGAATTGGGT+TGG	0.516327	5.4:+21707034	MS.gene070901:CDS
ATATGAAGGATGTTTGTGAT+AGG	0.519622	5.4:+21707057	MS.gene070901:CDS
TAGTGGGTGGAACTCTACTT+TGG	0.543912	5.4:+21706935	MS.gene070901:CDS
TGTGACAAAACTTCCTCTTG+TGG	0.551208	5.4:-21706885	None:intergenic
GTGGAGTGCCTATGATATGT+TGG	0.555355	5.4:+21706970	MS.gene070901:CDS
CTATTGAAGGAGCTTGAGGA+AGG	0.558458	5.4:+21706825	MS.gene070901:CDS
AAGATCTGCTATTGAAATGG+CGG	0.566824	5.4:+21707136	MS.gene070901:CDS
TAAAGAGAAAGGGATGATTG+TGG	0.571564	5.4:+21706854	MS.gene070901:CDS
AGGACTATTGAAGGAGCTTG+AGG	0.572112	5.4:+21706821	MS.gene070901:CDS
AGAAAGGGATGATTGTGGGG+TGG	0.586735	5.4:+21706859	MS.gene070901:CDS
TGTGGGGTGGGTTCCACAAG+AGG	0.592500	5.4:+21706872	MS.gene070901:CDS
AAGGGACTACTAAAGAGAAA+GGG	0.595105	5.4:+21706844	MS.gene070901:CDS
TGATATTATGACGAACAAGA+AGG	0.598411	5.4:+21707103	MS.gene070901:CDS
AAGAGAAAGGGATGATTGTG+GGG	0.603887	5.4:+21706856	MS.gene070901:CDS
TATTGAAGGAGCTTGAGGAA+GGG	0.618899	5.4:+21706826	MS.gene070901:CDS
TATTATGACGAACAAGAAGG+AGG	0.683051	5.4:+21707106	MS.gene070901:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATTTGATTCAGTATATA+AGG	+	chr5.4:21707210-21707229	MS.gene070901:CDS	15.0%
!!!	TTATATACTGAATCAAATTT+TGG	-	chr5.4:21707211-21707230	None:intergenic	15.0%
!	CTGATCAACAAATTAATAGT+AGG	+	chr5.4:21707003-21707022	MS.gene070901:CDS	25.0%
!!	ATTTGTTGATCAGCAAAATA+AGG	-	chr5.4:21706996-21707015	None:intergenic	25.0%
!!	TATACTGAATCAAATTTTGG+AGG	-	chr5.4:21707208-21707227	None:intergenic	25.0%
	AAATAAGGCCAACATATCAT+AGG	-	chr5.4:21706981-21707000	None:intergenic	30.0%
	ACAAGAAAAAGGACTATTGA+AGG	+	chr5.4:21706812-21706831	MS.gene070901:CDS	30.0%
	ATATGAAGGATGTTTGTGAT+AGG	+	chr5.4:21707057-21707076	MS.gene070901:CDS	30.0%
	TAGGAATGTTGTTGAGAAAA+TGG	+	chr5.4:21707076-21707095	MS.gene070901:CDS	30.0%
	TGATATTATGACGAACAAGA+AGG	+	chr5.4:21707103-21707122	MS.gene070901:CDS	30.0%
	TTCAAGATCTGCTATTGAAA+TGG	+	chr5.4:21707133-21707152	MS.gene070901:CDS	30.0%
	AAAGAGAAAGGGATGATTGT+GGG	+	chr5.4:21706855-21706874	MS.gene070901:CDS	35.0%
	AAGATCTGCTATTGAAATGG+CGG	+	chr5.4:21707136-21707155	MS.gene070901:CDS	35.0%
	AAGGGACTACTAAAGAGAAA+GGG	+	chr5.4:21706844-21706863	MS.gene070901:CDS	35.0%
	TAAAGAGAAAGGGATGATTG+TGG	+	chr5.4:21706854-21706873	MS.gene070901:CDS	35.0%
	TAATAGTAGGTTTGTGAGTG+AGG	+	chr5.4:21707016-21707035	MS.gene070901:CDS	35.0%
	TATTATGACGAACAAGAAGG+AGG	+	chr5.4:21707106-21707125	MS.gene070901:CDS	35.0%
!	GTTTTGTCACACAAAGCAAT+TGG	+	chr5.4:21706897-21706916	MS.gene070901:CDS	35.0%
!!	CAAATTTTGGAGGTTGTTGT+AGG	-	chr5.4:21707198-21707217	None:intergenic	35.0%
	AAGAGAAAGGGATGATTGTG+GGG	+	chr5.4:21706856-21706875	MS.gene070901:CDS	40.0%
	ACCATTAGGACTTACACTCT+TGG	-	chr5.4:21707171-21707190	None:intergenic	40.0%
	GAAGGGACTACTAAAGAGAA+AGG	+	chr5.4:21706843-21706862	MS.gene070901:CDS	40.0%
	TATTGAAGGAGCTTGAGGAA+GGG	+	chr5.4:21706826-21706845	MS.gene070901:CDS	40.0%
	TGAGTGAGGTTTGGAGAATT+GGG	+	chr5.4:21707030-21707049	MS.gene070901:CDS	40.0%
	TGTGACAAAACTTCCTCTTG+TGG	-	chr5.4:21706888-21706907	None:intergenic	40.0%
	TTGTTGTAGGAGGAACCATT+AGG	-	chr5.4:21707185-21707204	None:intergenic	40.0%
!	ACTTTGGAGAGTGTGATTTG+TGG	+	chr5.4:21706951-21706970	MS.gene070901:CDS	40.0%
!	GTGCCTTTTTGACACATAGT+GGG	+	chr5.4:21706919-21706938	MS.gene070901:CDS	40.0%
!	TCCAAGAGTGTAAGTCCTAA+TGG	+	chr5.4:21707167-21707186	MS.gene070901:CDS	40.0%
!!	ATTTTGGAGGTTGTTGTAGG+AGG	-	chr5.4:21707195-21707214	None:intergenic	40.0%
!!	GAGAATTGGGTTGGATATGA+AGG	+	chr5.4:21707043-21707062	MS.gene070901:CDS	40.0%
!!	TGCTATTGAAATGGCGGATT+TGG	+	chr5.4:21707142-21707161	MS.gene070901:CDS	40.0%
	AGGACTATTGAAGGAGCTTG+AGG	+	chr5.4:21706821-21706840	MS.gene070901:CDS	45.0%
	CCACCCACTATGTGTCAAAA+AGG	-	chr5.4:21706925-21706944	None:intergenic	45.0%
	CTATTGAAGGAGCTTGAGGA+AGG	+	chr5.4:21706825-21706844	MS.gene070901:CDS	45.0%
	GTAGGTTTGTGAGTGAGGTT+TGG	+	chr5.4:21707021-21707040	MS.gene070901:CDS	45.0%
	GTGAGTGAGGTTTGGAGAAT+TGG	+	chr5.4:21707029-21707048	MS.gene070901:CDS	45.0%
	TGAGGTTTGGAGAATTGGGT+TGG	+	chr5.4:21707034-21707053	MS.gene070901:CDS	45.0%
!	GGTGCCTTTTTGACACATAG+TGG	+	chr5.4:21706918-21706937	MS.gene070901:CDS	45.0%
!	GTGGAGTGCCTATGATATGT+TGG	+	chr5.4:21706970-21706989	MS.gene070901:CDS	45.0%
!	TAGTGGGTGGAACTCTACTT+TGG	+	chr5.4:21706935-21706954	MS.gene070901:CDS	45.0%
!!	CCTTTTTGACACATAGTGGG+TGG	+	chr5.4:21706922-21706941	MS.gene070901:CDS	45.0%
	AGAAAGGGATGATTGTGGGG+TGG	+	chr5.4:21706859-21706878	MS.gene070901:CDS	50.0%
	GAAAGGGATGATTGTGGGGT+GGG	+	chr5.4:21706860-21706879	MS.gene070901:CDS	50.0%
!	TGTGGGGTGGGTTCCACAAG+AGG	+	chr5.4:21706872-21706891	MS.gene070901:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	21706807	21707247	21706807	ID=MS.gene070901
chr5.4	mRNA	21706807	21707247	21706807	ID=MS.gene070901.t1;Parent=MS.gene070901
chr5.4	exon	21706807	21707247	21706807	ID=MS.gene070901.t1.exon1;Parent=MS.gene070901.t1
chr5.4	CDS	21706807	21707247	21706807	ID=cds.MS.gene070901.t1;Parent=MS.gene070901.t1

Gene Sequence

>MS.gene070901

ATGGTACAAGAAAAAGGACTATTGAAGGAGCTTGAGGAAGGGACTACTAAAGAGAAAGGGATGATTGTGGGGTGGGTTCCACAAGAGGAAGTTTTGTCACACAAAGCAATTGGTGCCTTTTTGACACATAGTGGGTGGAACTCTACTTTGGAGAGTGTGATTTGTGGAGTGCCTATGATATGTTGGCCTTATTTTGCTGATCAACAAATTAATAGTAGGTTTGTGAGTGAGGTTTGGAGAATTGGGTTGGATATGAAGGATGTTTGTGATAGGAATGTTGTTGAGAAAATGGTGAATGATATTATGACGAACAAGAAGGAGGAGTTTTCAAGATCTGCTATTGAAATGGCGGATTTGGCTTCCAAGAGTGTAAGTCCTAATGGTTCCTCCTACAACAACCTCCAAAATTTGATTCAGTATATAAGGTCTACTAGCCCATAA

Protein sequence

>MS.gene070901.t1

MVQEKGLLKELEEGTTKEKGMIVGWVPQEEVLSHKAIGAFLTHSGWNSTLESVICGVPMICWPYFADQQINSRFVSEVWRIGLDMKDVCDRNVVEKMVNDIMTNKKEEFSRSAIEMADLASKSVSPNGSSYNNLQNLIQYIRSTSP