Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93041.t1 | XP_024629264.1 | 97.4 | 227 | 6 | 0 | 1 | 227 | 1 | 227 | 7.00E-123 | 449.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93041.t1 | Q52K82 | 74.5 | 220 | 54 | 1 | 1 | 220 | 1 | 218 | 1.6e-91 | 337.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93041.t1 | G7LJD2 | 97.4 | 227 | 6 | 0 | 1 | 227 | 1 | 227 | 5.1e-123 | 449.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene93041 | 0.815683 | 8.16E-52 | -1.69E-46 |
| MS.gene049230 | MS.gene93041 | 0.82538 | 4.84E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene93041 | 0.816472 | 5.43E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene93041 | 0.803673 | 3.12E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene93041 | 0.848152 | 7.35E-60 | -1.69E-46 |
| MS.gene049404 | MS.gene93041 | 0.809899 | 1.51E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene93041 | 0.802433 | 5.62E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene93041 | 0.844461 | 7.45E-59 | -1.69E-46 |
| MS.gene049452 | MS.gene93041 | 0.818657 | 1.75E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene93041 | 0.824789 | 6.67E-54 | -1.69E-46 |
| MS.gene050026 | MS.gene93041 | 0.81369 | 2.25E-51 | -1.69E-46 |
| MS.gene050105 | MS.gene93041 | 0.802161 | 6.40E-49 | -1.69E-46 |
| MS.gene05016 | MS.gene93041 | 0.802099 | 6.59E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene93041 | 0.837902 | 3.95E-57 | -1.69E-46 |
| MS.gene050227 | MS.gene93041 | 0.849173 | 3.83E-60 | -1.69E-46 |
| MS.gene050228 | MS.gene93041 | 0.851688 | 7.54E-61 | -1.69E-46 |
| MS.gene050442 | MS.gene93041 | 0.869967 | 2.08E-66 | -1.69E-46 |
| MS.gene050559 | MS.gene93041 | 0.811311 | 7.46E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene93041 | 0.818478 | 1.92E-52 | -1.69E-46 |
| MS.gene050562 | MS.gene93041 | 0.804542 | 2.05E-49 | -1.69E-46 |
| MS.gene050605 | MS.gene93041 | 0.832289 | 1.03E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene93041 | -0.824579 | 7.48E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene93041 | 0.811975 | 5.35E-51 | -1.69E-46 |
| MS.gene050680 | MS.gene93041 | 0.864096 | 1.55E-64 | -1.69E-46 |
| MS.gene050719 | MS.gene93041 | 0.832471 | 9.28E-56 | -1.69E-46 |
| MS.gene050721 | MS.gene93041 | 0.827574 | 1.45E-54 | -1.69E-46 |
| MS.gene050724 | MS.gene93041 | 0.83805 | 3.62E-57 | -1.69E-46 |
| MS.gene050750 | MS.gene93041 | 0.855814 | 4.90E-62 | -1.69E-46 |
| MS.gene050759 | MS.gene93041 | 0.819404 | 1.18E-52 | -1.69E-46 |
| MS.gene050820 | MS.gene93041 | 0.833016 | 6.79E-56 | -1.69E-46 |
| MS.gene050953 | MS.gene93041 | 0.846669 | 1.88E-59 | -1.69E-46 |
| MS.gene050962 | MS.gene93041 | 0.808021 | 3.80E-50 | -1.69E-46 |
| MS.gene050987 | MS.gene93041 | 0.801647 | 8.16E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene93041 | 0.805209 | 1.49E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene93041 | 0.806674 | 7.33E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene93041 | 0.83369 | 4.61E-56 | -1.69E-46 |
| MS.gene051370 | MS.gene93041 | 0.831122 | 2.00E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene93041 | 0.804552 | 2.04E-49 | -1.69E-46 |
| MS.gene051859 | MS.gene93041 | 0.825419 | 4.74E-54 | -1.69E-46 |
| MS.gene051924 | MS.gene93041 | -0.804031 | 2.63E-49 | -1.69E-46 |
| MS.gene051926 | MS.gene93041 | -0.802471 | 5.52E-49 | -1.69E-46 |
| MS.gene051983 | MS.gene93041 | 0.849952 | 2.32E-60 | -1.69E-46 |
| MS.gene052012 | MS.gene93041 | 0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene93041 | 0.856917 | 2.33E-62 | -1.69E-46 |
| MS.gene052190 | MS.gene93041 | 0.884469 | 1.87E-71 | -1.69E-46 |
| MS.gene052208 | MS.gene93041 | 0.803214 | 3.88E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene93041 | 0.801572 | 8.45E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene93041 | 0.888992 | 3.61E-73 | -1.69E-46 |
| MS.gene052389 | MS.gene93041 | 0.827124 | 1.86E-54 | -1.69E-46 |
| MS.gene052488 | MS.gene93041 | 0.800419 | 1.45E-48 | -1.69E-46 |
| MS.gene052500 | MS.gene93041 | 0.810813 | 9.57E-51 | -1.69E-46 |
| MS.gene052502 | MS.gene93041 | 0.811329 | 7.39E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene93041 | 0.809174 | 2.16E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene93041 | 0.805357 | 1.39E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene93041 | 0.829472 | 5.05E-55 | -1.69E-46 |
| MS.gene052826 | MS.gene93041 | 0.811242 | 7.72E-51 | -1.69E-46 |
| MS.gene052866 | MS.gene93041 | 0.808233 | 3.42E-50 | -1.69E-46 |
| MS.gene052867 | MS.gene93041 | 0.836572 | 8.65E-57 | -1.69E-46 |
| MS.gene052954 | MS.gene93041 | 0.833304 | 5.76E-56 | -1.69E-46 |
| MS.gene053006 | MS.gene93041 | 0.816425 | 5.57E-52 | -1.69E-46 |
| MS.gene053054 | MS.gene93041 | -0.81003 | 1.41E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene93041 | 0.864837 | 9.12E-65 | -1.69E-46 |
| MS.gene053188 | MS.gene93041 | 0.817357 | 3.44E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene93041 | 0.82933 | 5.47E-55 | -1.69E-46 |
| MS.gene053216 | MS.gene93041 | 0.808901 | 2.47E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene93041 | 0.804843 | 1.78E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene93041 | 0.802409 | 5.69E-49 | -1.69E-46 |
| MS.gene053584 | MS.gene93041 | 0.823788 | 1.15E-53 | -1.69E-46 |
| MS.gene053953 | MS.gene93041 | 0.825234 | 5.24E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene93041 | 0.802732 | 4.88E-49 | -1.69E-46 |
| MS.gene054093 | MS.gene93041 | 0.814142 | 1.79E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene93041 | 0.820218 | 7.70E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene93041 | 0.833654 | 4.71E-56 | -1.69E-46 |
| MS.gene054236 | MS.gene93041 | 0.815363 | 9.60E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene93041 | -0.859912 | 2.98E-63 | -1.69E-46 |
| MS.gene054405 | MS.gene93041 | 0.842587 | 2.36E-58 | -1.69E-46 |
| MS.gene054467 | MS.gene93041 | 0.82114 | 4.73E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene93041 | 0.868574 | 5.90E-66 | -1.69E-46 |
| MS.gene054479 | MS.gene93041 | 0.804662 | 1.94E-49 | -1.69E-46 |
| MS.gene054537 | MS.gene93041 | 0.802954 | 4.39E-49 | -1.69E-46 |
| MS.gene054559 | MS.gene93041 | 0.855091 | 7.96E-62 | -1.69E-46 |
| MS.gene054610 | MS.gene93041 | 0.801014 | 1.10E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene93041 | 0.804735 | 1.87E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene93041 | 0.80528 | 1.44E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene93041 | 0.80278 | 4.77E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene93041 | 0.808676 | 2.76E-50 | -1.69E-46 |
| MS.gene05510 | MS.gene93041 | 0.817865 | 2.64E-52 | -1.69E-46 |
| MS.gene055166 | MS.gene93041 | 0.81149 | 6.82E-51 | -1.69E-46 |
| MS.gene055222 | MS.gene93041 | 0.802919 | 4.46E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene93041 | 0.817993 | 2.47E-52 | -1.69E-46 |
| MS.gene055356 | MS.gene93041 | 0.8404 | 8.90E-58 | -1.69E-46 |
| MS.gene055358 | MS.gene93041 | 0.809327 | 2.00E-50 | -1.69E-46 |
| MS.gene055367 | MS.gene93041 | 0.830543 | 2.77E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene93041 | 0.804444 | 2.15E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene93041 | 0.871751 | 5.38E-67 | -1.69E-46 |
| MS.gene055778 | MS.gene93041 | 0.819569 | 1.08E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene93041 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene055841 | MS.gene93041 | 0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene05595 | MS.gene93041 | 0.82843 | 9.03E-55 | -1.69E-46 |
| MS.gene05604 | MS.gene93041 | 0.816381 | 5.69E-52 | -1.69E-46 |
| MS.gene056087 | MS.gene93041 | 0.805604 | 1.23E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene93041 | 0.811711 | 6.11E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene93041 | 0.825269 | 5.14E-54 | -1.69E-46 |
| MS.gene056498 | MS.gene93041 | 0.813201 | 2.89E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene93041 | 0.968064 | 3.78E-128 | -1.69E-46 |
| MS.gene056779 | MS.gene93041 | 0.814636 | 1.39E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene93041 | 0.836673 | 8.15E-57 | -1.69E-46 |
| MS.gene057012 | MS.gene93041 | 0.806883 | 6.63E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene93041 | 0.872758 | 2.49E-67 | -1.69E-46 |
| MS.gene057060 | MS.gene93041 | 0.843103 | 1.72E-58 | -1.69E-46 |
| MS.gene057156 | MS.gene93041 | -0.800202 | 1.61E-48 | -1.69E-46 |
| MS.gene057194 | MS.gene93041 | 0.815245 | 1.02E-51 | -1.69E-46 |
| MS.gene057200 | MS.gene93041 | 0.818316 | 2.09E-52 | -1.69E-46 |
| MS.gene057414 | MS.gene93041 | 0.810034 | 1.41E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene93041 | 0.802107 | 6.56E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene93041 | 0.82926 | 5.68E-55 | -1.69E-46 |
| MS.gene058037 | MS.gene93041 | 0.804876 | 1.75E-49 | -1.69E-46 |
| MS.gene058139 | MS.gene93041 | 0.80822 | 3.45E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene93041 | 0.826032 | 3.39E-54 | -1.69E-46 |
| MS.gene058399 | MS.gene93041 | 0.82768 | 1.37E-54 | -1.69E-46 |
| MS.gene058426 | MS.gene93041 | 0.808743 | 2.67E-50 | -1.69E-46 |
| MS.gene058548 | MS.gene93041 | 0.811722 | 6.07E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene93041 | 0.804628 | 1.97E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene93041 | 0.810828 | 9.49E-51 | -1.69E-46 |
| MS.gene058829 | MS.gene93041 | 0.802071 | 6.67E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene93041 | 0.840881 | 6.65E-58 | -1.69E-46 |
| MS.gene059128 | MS.gene93041 | 0.831907 | 1.28E-55 | -1.69E-46 |
| MS.gene059161 | MS.gene93041 | 0.822935 | 1.82E-53 | -1.69E-46 |
| MS.gene059306 | MS.gene93041 | 0.853021 | 3.15E-61 | -1.69E-46 |
| MS.gene059382 | MS.gene93041 | 0.810895 | 9.18E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene93041 | 0.801529 | 8.63E-49 | -1.69E-46 |
| MS.gene059550 | MS.gene93041 | 0.812383 | 4.36E-51 | -1.69E-46 |
| MS.gene059609 | MS.gene93041 | 0.826051 | 3.35E-54 | -1.69E-46 |
| MS.gene059789 | MS.gene93041 | 0.816237 | 6.13E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene93041 | 0.85796 | 1.14E-62 | -1.69E-46 |
| MS.gene060137 | MS.gene93041 | -0.804288 | 2.32E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene93041 | 0.802922 | 4.46E-49 | -1.69E-46 |
| MS.gene060297 | MS.gene93041 | 0.806982 | 6.31E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene93041 | 0.832032 | 1.19E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene93041 | 0.846179 | 2.56E-59 | -1.69E-46 |
| MS.gene06052 | MS.gene93041 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene93041 | 0.838785 | 2.34E-57 | -1.69E-46 |
| MS.gene060683 | MS.gene93041 | 0.839841 | 1.24E-57 | -1.69E-46 |
| MS.gene060685 | MS.gene93041 | 0.837976 | 3.78E-57 | -1.69E-46 |
| MS.gene060802 | MS.gene93041 | 0.809589 | 1.76E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene93041 | 0.818277 | 2.13E-52 | -1.69E-46 |
| MS.gene060840 | MS.gene93041 | 0.80658 | 7.68E-50 | -1.69E-46 |
| MS.gene060879 | MS.gene93041 | 0.808583 | 2.88E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene93041 | 0.80924 | 2.09E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene93041 | -0.859224 | 4.79E-63 | -1.69E-46 |
| MS.gene061114 | MS.gene93041 | -0.831599 | 1.52E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93041.t1 | MTR_8g070510 | 97.357 | 227 | 6 | 0 | 1 | 227 | 1 | 227 | 5.42e-164 | 452 |
| MS.gene93041.t1 | MTR_8g070510 | 97.309 | 223 | 6 | 0 | 5 | 227 | 1 | 223 | 7.38e-161 | 444 |
| MS.gene93041.t1 | MTR_7g451050 | 41.584 | 202 | 116 | 2 | 18 | 219 | 18 | 217 | 6.75e-54 | 172 |
| MS.gene93041.t1 | MTR_7g451050 | 41.584 | 202 | 116 | 2 | 18 | 219 | 36 | 235 | 1.17e-53 | 172 |
| MS.gene93041.t1 | MTR_7g451050 | 36.571 | 175 | 109 | 2 | 18 | 192 | 18 | 190 | 4.17e-36 | 126 |
| MS.gene93041.t1 | MTR_7g451050 | 35.359 | 181 | 115 | 2 | 18 | 198 | 36 | 214 | 6.33e-36 | 126 |
| MS.gene93041.t1 | MTR_1g026190 | 29.487 | 156 | 88 | 3 | 53 | 208 | 382 | 515 | 1.45e-13 | 69.7 |
| MS.gene93041.t1 | MTR_8g066630 | 27.439 | 164 | 96 | 5 | 53 | 213 | 12 | 155 | 7.92e-12 | 62.0 |
| MS.gene93041.t1 | MTR_4g132070 | 25.641 | 156 | 94 | 2 | 53 | 208 | 391 | 524 | 9.37e-12 | 64.3 |
| MS.gene93041.t1 | MTR_5g092810 | 25.806 | 155 | 93 | 2 | 54 | 208 | 393 | 525 | 2.89e-11 | 62.8 |
| MS.gene93041.t1 | MTR_4g066660 | 28.205 | 156 | 90 | 2 | 53 | 208 | 372 | 505 | 3.95e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93041.t1 | AT4G26470 | 74.312 | 218 | 54 | 1 | 1 | 218 | 1 | 216 | 5.92e-119 | 338 |
| MS.gene93041.t1 | AT4G26470 | 74.312 | 218 | 54 | 1 | 1 | 218 | 64 | 279 | 1.43e-117 | 337 |
| MS.gene93041.t1 | AT4G26470 | 71.354 | 192 | 53 | 1 | 1 | 192 | 1 | 190 | 4.30e-98 | 285 |
| MS.gene93041.t1 | AT3G24110 | 43.578 | 218 | 120 | 3 | 9 | 224 | 9 | 225 | 2.76e-57 | 181 |
| MS.gene93041.t1 | AT3G24110 | 43.578 | 218 | 120 | 3 | 9 | 224 | 12 | 228 | 3.52e-57 | 181 |
| MS.gene93041.t1 | AT4G04740 | 25.000 | 204 | 118 | 5 | 8 | 208 | 330 | 501 | 1.29e-12 | 67.0 |
| MS.gene93041.t1 | AT4G04740 | 25.000 | 204 | 118 | 5 | 8 | 208 | 330 | 501 | 1.29e-12 | 67.0 |
| MS.gene93041.t1 | AT4G04740 | 25.000 | 204 | 118 | 5 | 8 | 208 | 330 | 501 | 1.29e-12 | 67.0 |
| MS.gene93041.t1 | AT4G04740 | 25.000 | 204 | 118 | 5 | 8 | 208 | 330 | 501 | 1.29e-12 | 67.0 |
| MS.gene93041.t1 | AT4G04740 | 25.000 | 204 | 118 | 5 | 8 | 208 | 330 | 501 | 1.29e-12 | 67.0 |
| MS.gene93041.t1 | AT4G04740 | 25.000 | 204 | 118 | 5 | 8 | 208 | 330 | 501 | 1.29e-12 | 67.0 |
| MS.gene93041.t1 | AT4G04720 | 26.923 | 156 | 92 | 2 | 53 | 208 | 379 | 512 | 7.79e-12 | 64.7 |
| MS.gene93041.t1 | AT4G04720 | 26.923 | 156 | 92 | 2 | 53 | 208 | 379 | 512 | 7.79e-12 | 64.7 |
| MS.gene93041.t1 | AT4G04700 | 27.059 | 170 | 99 | 3 | 42 | 208 | 317 | 464 | 3.85e-11 | 62.4 |
| MS.gene93041.t1 | AT3G20410 | 27.097 | 155 | 91 | 4 | 54 | 208 | 392 | 524 | 7.05e-11 | 61.6 |
| MS.gene93041.t1 | AT3G20410 | 27.097 | 155 | 91 | 4 | 54 | 208 | 392 | 524 | 7.05e-11 | 61.6 |
| MS.gene93041.t1 | AT4G04695 | 27.564 | 156 | 91 | 2 | 53 | 208 | 331 | 464 | 7.14e-11 | 61.6 |
Find 48 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGGAATGGTGAACTTTA+AGG | 0.231657 | 8.2:-32454307 | MS.gene93041:CDS |
| TGTATTCTTAGACAAGAATA+AGG | 0.312157 | 8.2:-32455889 | MS.gene93041:CDS |
| TCAAATGTGGCCTCCAGATT+TGG | 0.325162 | 8.2:+32455930 | None:intergenic |
| AACCAAGCTTGAGGCTAAAA+TGG | 0.325884 | 8.2:-32457577 | MS.gene93041:CDS |
| ACATCCGGGGAACGTTCTTC+TGG | 0.336685 | 8.2:-32455819 | MS.gene93041:CDS |
| ACGAATTGGCATGCCAAATC+TGG | 0.337140 | 8.2:-32455943 | MS.gene93041:CDS |
| TATAGTGTTGAATGATTTCA+TGG | 0.344014 | 8.2:+32457518 | None:intergenic |
| TTGCCAAAATGCAGAAGAAA+TGG | 0.366048 | 8.2:-32454340 | MS.gene93041:intron |
| AGAATAGCCATGAAAAGATT+TGG | 0.372821 | 8.2:-32455795 | MS.gene93041:intron |
| GCCGCAGATGAAGATTCTAA+TGG | 0.378648 | 8.2:-32456784 | MS.gene93041:intron |
| CCGCAGATGAAGATTCTAAT+GGG | 0.395441 | 8.2:-32456783 | MS.gene93041:intron |
| AGGGCCATCTTTGAGCAGTT+TGG | 0.430873 | 8.2:-32457453 | MS.gene93041:intron |
| CTTGTCTAGAAATCACGAAT+TGG | 0.446229 | 8.2:-32455957 | MS.gene93041:intron |
| ATGTAGTTTCATTTATAGCT+TGG | 0.465153 | 8.2:+32455838 | None:intergenic |
| GCTATAAATGAAACTACATC+CGG | 0.467940 | 8.2:-32455834 | MS.gene93041:CDS |
| AAAATGCAGAAGAAATGGAT+TGG | 0.476289 | 8.2:-32454335 | MS.gene93041:intron |
| GAAGAAGTGTTTCAGTAAGC+TGG | 0.478339 | 8.2:-32456740 | MS.gene93041:CDS |
| ATGGGAGGTGCAATGGGAAA+GGG | 0.479453 | 8.2:-32457630 | MS.gene93041:CDS |
| GATACTGCATGAAGTGCTGC+AGG | 0.484247 | 8.2:+32456592 | None:intergenic |
| GATGGGAGGTGCAATGGGAA+AGG | 0.497322 | 8.2:-32457631 | MS.gene93041:CDS |
| AAATGCAGAAGAAATGGATT+GGG | 0.498895 | 8.2:-32454334 | MS.gene93041:intron |
| GGTTGGAATTGATGAATTTG+AGG | 0.500253 | 8.2:-32454259 | MS.gene93041:CDS |
| GGAGGCCACATTTGAGACAT+TGG | 0.509823 | 8.2:-32455922 | MS.gene93041:CDS |
| TTGGCGATGGGAGGTGCAAT+GGG | 0.518653 | 8.2:-32457636 | None:intergenic |
| TTCGCATTTACACGGTGGGT+TGG | 0.523575 | 8.2:-32454276 | MS.gene93041:CDS |
| ATTGGCGATGGGAGGTGCAA+TGG | 0.524730 | 8.2:-32457637 | None:intergenic |
| AATTGATGAATTTGAGGACG+AGG | 0.525205 | 8.2:-32454253 | MS.gene93041:CDS |
| ATGAGAGCTTCAGAAAATGC+AGG | 0.530176 | 8.2:-32457473 | MS.gene93041:CDS |
| CCTACCAAACTGCTCAAAGA+TGG | 0.539084 | 8.2:+32457449 | None:intergenic |
| TTCTTAGACAAGAATAAGGA+CGG | 0.561005 | 8.2:-32455885 | MS.gene93041:CDS |
| TCTTCCAGAAGAACGTTCCC+CGG | 0.576812 | 8.2:+32455815 | None:intergenic |
| CTATAAATGAAACTACATCC+GGG | 0.577846 | 8.2:-32455833 | MS.gene93041:CDS |
| CTGCAGGGTCATCTTTGAGA+AGG | 0.604557 | 8.2:+32456608 | None:intergenic |
| CAAGCTTGAGGCTAAAATGG+TGG | 0.616956 | 8.2:-32457574 | MS.gene93041:CDS |
| TCTTAGACAAGAATAAGGAC+GGG | 0.620398 | 8.2:-32455884 | MS.gene93041:CDS |
| GTTGATTGATTGGCGATGGG+AGG | 0.623063 | 8.2:-32457645 | None:intergenic |
| TGGTGGAAGCAATGCAACGG+AGG | 0.623952 | 8.2:-32457557 | MS.gene93041:CDS |
| TGAGGACGAGGAAAATGCAT+AGG | 0.624859 | 8.2:-32454241 | None:intergenic |
| ATCAACCAATGTCTCAAATG+TGG | 0.635646 | 8.2:+32455917 | None:intergenic |
| TGAGAGCTTCAGAAAATGCA+GGG | 0.640702 | 8.2:-32457472 | MS.gene93041:CDS |
| GGTGGAAGCAATGCAACGGA+GGG | 0.644209 | 8.2:-32457556 | MS.gene93041:CDS |
| AATTGGCATGCCAAATCTGG+AGG | 0.644569 | 8.2:-32455940 | MS.gene93041:CDS |
| CGCAGATGAAGATTCTAATG+GGG | 0.650490 | 8.2:-32456782 | MS.gene93041:intron |
| GGTAGCAGAAACCAAGCTTG+AGG | 0.658820 | 8.2:-32457586 | MS.gene93041:CDS |
| TATAAATGAAACTACATCCG+GGG | 0.670677 | 8.2:-32455832 | MS.gene93041:CDS |
| AAATGGTGGAAGCAATGCAA+CGG | 0.672556 | 8.2:-32457560 | MS.gene93041:CDS |
| ATGCAACGGAGGGAATGTCA+AGG | 0.680566 | 8.2:-32457546 | MS.gene93041:CDS |
| ATACTGCATGAAGTGCTGCA+GGG | 0.692431 | 8.2:+32456593 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTATTAAAATTAAGTA+AGG | - | chr8.2:32457408-32457427 | MS.gene93041:intron | 10.0% |
| !! | ACTTAAAATTTCAAAATTAT+AGG | + | chr8.2:32455758-32455777 | None:intergenic | 10.0% |
| !! | ATAAAAAAAACAATAAAACT+TGG | + | chr8.2:32456702-32456721 | None:intergenic | 10.0% |
| !! | TAAAAAAAACAATAAAACTT+GGG | + | chr8.2:32456701-32456720 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr8.2:32457215-32457234 | MS.gene93041:intron | 10.0% |
| !! | AAAGCTATTAAAATTAAGTA+AGG | - | chr8.2:32457306-32457325 | MS.gene93041:intron | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | + | chr8.2:32456965-32456984 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr8.2:32456893-32456912 | None:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | + | chr8.2:32457084-32457103 | None:intergenic | 15.0% |
| !! | CTGATATAAATAATGTTTAT+TGG | - | chr8.2:32454495-32454514 | MS.gene93041:intron | 15.0% |
| !! | GAAAATTACATATTTAATTC+AGG | - | chr8.2:32455638-32455657 | MS.gene93041:intron | 15.0% |
| !! | GTATATATGTTTATTGTAAT+TGG | - | chr8.2:32455040-32455059 | MS.gene93041:intron | 15.0% |
| !! | TAATGAATATATACAAACTT+GGG | + | chr8.2:32457494-32457513 | None:intergenic | 15.0% |
| !! | TACAATCACATAAAAAAAAA+TGG | + | chr8.2:32454929-32454948 | None:intergenic | 15.0% |
| !! | TTAATGAATATATACAAACT+TGG | + | chr8.2:32457495-32457514 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | - | chr8.2:32457244-32457263 | MS.gene93041:intron | 15.0% |
| !!! | AATTTTTGCGAAATTTTTTT+CGG | + | chr8.2:32457049-32457068 | None:intergenic | 15.0% |
| !!! | ATAAGTCAATTTTTTTTTGT+AGG | - | chr8.2:32457276-32457295 | MS.gene93041:intron | 15.0% |
| !!! | ATTTTATTGACCTTTTTTAA+TGG | + | chr8.2:32456667-32456686 | None:intergenic | 15.0% |
| !!! | GAATATTATTTGAGTTTAAT+GGG | - | chr8.2:32455403-32455422 | MS.gene93041:intron | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | - | chr8.2:32457243-32457262 | MS.gene93041:intron | 15.0% |
| !!! | TAACTGCATTTTTAAATTAA+TGG | + | chr8.2:32455498-32455517 | None:intergenic | 15.0% |
| !!! | TAAGCTATTTTTTTAACAAA+AGG | - | chr8.2:32454648-32454667 | MS.gene93041:intron | 15.0% |
| !!! | TAAGTCAATTTTTTTTTGTA+GGG | - | chr8.2:32457277-32457296 | MS.gene93041:intron | 15.0% |
| !!! | TTATTTACATAGTTTAAAGT+AGG | - | chr8.2:32456718-32456737 | MS.gene93041:CDS | 15.0% |
| !!! | TTTTCTAAATAAAATGCAAA+AGG | + | chr8.2:32455623-32455642 | None:intergenic | 15.0% |
| !! | AAAAATGCAGTTATAAAAGT+GGG | - | chr8.2:32455505-32455524 | MS.gene93041:intron | 20.0% |
| !! | AAGGTCAATAAAATAGATAT+TGG | - | chr8.2:32456673-32456692 | MS.gene93041:CDS | 20.0% |
| !! | AGGTCAATAAAATAGATATT+GGG | - | chr8.2:32456674-32456693 | MS.gene93041:CDS | 20.0% |
| !! | ATTAGTATAAGCAACATTTA+AGG | - | chr8.2:32456304-32456323 | MS.gene93041:intron | 20.0% |
| !! | CAAAAATAGTATGGATTTAA+AGG | + | chr8.2:32455599-32455618 | None:intergenic | 20.0% |
| !! | GTGTTAAAAACGTTATTAAA+AGG | - | chr8.2:32457019-32457038 | MS.gene93041:intron | 20.0% |
| !! | TAAAAATGCAGTTATAAAAG+TGG | - | chr8.2:32455504-32455523 | MS.gene93041:intron | 20.0% |
| !! | TAAACATATATACGACAATT+TGG | + | chr8.2:32455033-32455052 | None:intergenic | 20.0% |
| !! | TATAAATTATCAACGAAAAC+AGG | + | chr8.2:32455858-32455877 | None:intergenic | 20.0% |
| !!! | AAAAGGGTTAAATATGTTTT+TGG | + | chr8.2:32457466-32457485 | None:intergenic | 20.0% |
| !!! | ATATGTTTTCACAAGAAAAT+TGG | - | chr8.2:32456229-32456248 | MS.gene93041:intron | 20.0% |
| !!! | ATCTTGTCTTTATTTTTTCT+TGG | - | chr8.2:32456818-32456837 | MS.gene93041:intron | 20.0% |
| !!! | ATGTGATTTTAATGATGATT+TGG | - | chr8.2:32455198-32455217 | MS.gene93041:intron | 20.0% |
| !!! | CCATTTTATTTATTTTAGCA+GGG | - | chr8.2:32457347-32457366 | MS.gene93041:intron | 20.0% |
| !!! | GAGTATAGAATTTTTTTGTA+GGG | + | chr8.2:32456922-32456941 | None:intergenic | 20.0% |
| !!! | GGAATATTATTTGAGTTTAA+TGG | - | chr8.2:32455402-32455421 | MS.gene93041:intron | 20.0% |
| !!! | TATGTTTTCACAAGAAAATT+GGG | - | chr8.2:32456230-32456249 | MS.gene93041:intron | 20.0% |
| !!! | TCTTGTCTTTATTTTTTCTT+GGG | - | chr8.2:32456819-32456838 | MS.gene93041:intron | 20.0% |
| !!! | TGAGTATAGAATTTTTTTGT+AGG | + | chr8.2:32456923-32456942 | None:intergenic | 20.0% |
| !!! | TGTGATTTTAATGATGATTT+GGG | - | chr8.2:32455199-32455218 | MS.gene93041:intron | 20.0% |
| !!! | TTGTTTGTTATTCAATTTAG+AGG | + | chr8.2:32456258-32456277 | None:intergenic | 20.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | + | chr8.2:32456954-32456973 | None:intergenic | 25.0% |
| ! | AATGGTATGACATGAAAAAA+TGG | + | chr8.2:32455480-32455499 | None:intergenic | 25.0% |
| ! | ATAGACCTATCCATTAAAAA+AGG | - | chr8.2:32456654-32456673 | MS.gene93041:CDS | 25.0% |
| ! | ATATGTGTGGAATTTAAACA+AGG | + | chr8.2:32456116-32456135 | None:intergenic | 25.0% |
| ! | ATGTAGTTTCATTTATAGCT+TGG | + | chr8.2:32456037-32456056 | None:intergenic | 25.0% |
| ! | ATTTGAAAGGATAGAGAAAA+TGG | + | chr8.2:32455883-32455902 | None:intergenic | 25.0% |
| ! | CAATTATTGACAAATAGAAC+AGG | - | chr8.2:32456477-32456496 | MS.gene93041:intron | 25.0% |
| ! | CCCTGCTAAAATAAATAAAA+TGG | + | chr8.2:32457350-32457369 | None:intergenic | 25.0% |
| ! | GTTGATGTTTGAATTATTTC+GGG | - | chr8.2:32455353-32455372 | MS.gene93041:intron | 25.0% |
| ! | TATGTGTGGAATTTAAACAA+GGG | + | chr8.2:32456115-32456134 | None:intergenic | 25.0% |
| ! | TATTTAATTCAGGAGATGTT+TGG | - | chr8.2:32455648-32455667 | MS.gene93041:intron | 25.0% |
| ! | TGATCCTATTGTATAAATTC+AGG | + | chr8.2:32454521-32454540 | None:intergenic | 25.0% |
| ! | TGTATTCTTAGACAAGAATA+AGG | - | chr8.2:32455983-32456002 | MS.gene93041:intron | 25.0% |
| ! | TTTATTTCCATAAACTCTCT+AGG | + | chr8.2:32454726-32454745 | None:intergenic | 25.0% |
| !! | ATACATTTAACTTCAGAGAA+TGG | - | chr8.2:32455381-32455400 | MS.gene93041:intron | 25.0% |
| !! | GGTTGATGTTTGAATTATTT+CGG | - | chr8.2:32455352-32455371 | MS.gene93041:intron | 25.0% |
| !! | GTTAAGAAGTTTTTCTGTTA+TGG | - | chr8.2:32455697-32455716 | MS.gene93041:intron | 25.0% |
| !! | TATAGTGTTGAATGATTTCA+TGG | + | chr8.2:32454357-32454376 | None:intergenic | 25.0% |
| !! | TCTTGGGTTAATTATGTTTT+TGG | - | chr8.2:32456835-32456854 | MS.gene93041:intron | 25.0% |
| !! | TTAAGTTGTTTACTCAAACA+CGG | + | chr8.2:32454578-32454597 | None:intergenic | 25.0% |
| !!! | ATTGACCTTTTTTAATGGAT+AGG | + | chr8.2:32456662-32456681 | None:intergenic | 25.0% |
| !!! | CATCAATTTTTGGGAATTTT+AGG | + | chr8.2:32454382-32454401 | None:intergenic | 25.0% |
| !!! | GCCATTTTATTTATTTTAGC+AGG | - | chr8.2:32457346-32457365 | MS.gene93041:intron | 25.0% |
| !!! | TGCTTTTGAAAACAACTTAT+AGG | + | chr8.2:32455305-32455324 | None:intergenic | 25.0% |
| !!! | TGTTTTTGGTCTCTATAAAA+TGG | + | chr8.2:32457452-32457471 | None:intergenic | 25.0% |
| AAAATGCAGAAGAAATGGAT+TGG | - | chr8.2:32457537-32457556 | MS.gene93041:CDS | 30.0% | |
| AAATGGAATGGTGAACTTTA+AGG | - | chr8.2:32457565-32457584 | MS.gene93041:CDS | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr8.2:32456878-32456897 | None:intergenic | 30.0% | |
| AAGTAAGGACTAAACTTAGA+AGG | - | chr8.2:32457321-32457340 | MS.gene93041:intron | 30.0% | |
| ACAAACTTGGGAAGAAAAAA+GGG | + | chr8.2:32457482-32457501 | None:intergenic | 30.0% | |
| AGAATAGCCATGAAAAGATT+TGG | - | chr8.2:32456077-32456096 | MS.gene93041:intron | 30.0% | |
| ATAATTCAAACATCAACCAG+AGG | + | chr8.2:32455350-32455369 | None:intergenic | 30.0% | |
| ATATAAGCACTTACATCACA+TGG | + | chr8.2:32454627-32454646 | None:intergenic | 30.0% | |
| CAATTATCAAGCTCATTCAA+AGG | - | chr8.2:32454953-32454972 | MS.gene93041:intron | 30.0% | |
| CTATAAATGAAACTACATCC+GGG | - | chr8.2:32456039-32456058 | MS.gene93041:intron | 30.0% | |
| GCAAAAGGACAAAAATAGTA+TGG | + | chr8.2:32455608-32455627 | None:intergenic | 30.0% | |
| GCTATAAATGAAACTACATC+CGG | - | chr8.2:32456038-32456057 | MS.gene93041:intron | 30.0% | |
| GTATGTCAGCAAAAATGAAA+TGG | - | chr8.2:32456010-32456029 | MS.gene93041:intron | 30.0% | |
| GTCATAGAGAACAATTTGAA+AGG | + | chr8.2:32455896-32455915 | None:intergenic | 30.0% | |
| GTTGAAATTAACCAAGTGAT+TGG | - | chr8.2:32456433-32456452 | MS.gene93041:intron | 30.0% | |
| TACAAACTTGGGAAGAAAAA+AGG | + | chr8.2:32457483-32457502 | None:intergenic | 30.0% | |
| TATAAATGAAACTACATCCG+GGG | - | chr8.2:32456040-32456059 | MS.gene93041:intron | 30.0% | |
| TTATAAAAGTGGGATGATGT+GGG | - | chr8.2:32455515-32455534 | MS.gene93041:intron | 30.0% | |
| TTCTTAGACAAGAATAAGGA+CGG | - | chr8.2:32455987-32456006 | MS.gene93041:intron | 30.0% | |
| TTGGCCTGAATTTATACAAT+AGG | - | chr8.2:32454514-32454533 | MS.gene93041:intron | 30.0% | |
| ! | AAATGCAGAAGAAATGGATT+GGG | - | chr8.2:32457538-32457557 | MS.gene93041:CDS | 30.0% |
| ! | AATCCATTTCTTCTGCATTT+TGG | + | chr8.2:32457538-32457557 | None:intergenic | 30.0% |
| ! | AGTTTCTTTTCGCATTTACA+CGG | - | chr8.2:32457588-32457607 | MS.gene93041:CDS | 30.0% |
| ! | ATAAACTGAAAACCAGCTTT+TGG | - | chr8.2:32454741-32454760 | MS.gene93041:intron | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+AGG | + | chr8.2:32457181-32457200 | None:intergenic | 30.0% |
| ! | CTAATTTACACCGACATTTT+AGG | + | chr8.2:32455429-32455448 | None:intergenic | 30.0% |
| ! | GTACTAGTTTCAACTTTCAA+TGG | + | chr8.2:32456778-32456797 | None:intergenic | 30.0% |
| ! | TCAACTTTCAATGGAGTTTT+AGG | + | chr8.2:32456769-32456788 | None:intergenic | 30.0% |
| ! | TGAAGCTCTCATCAATTTTT+GGG | + | chr8.2:32454391-32454410 | None:intergenic | 30.0% |
| ! | TGAATCACCCAAAAAGTTTT+GGG | - | chr8.2:32454265-32454284 | MS.gene93041:CDS | 30.0% |
| !! | GAAATGGATTGGGATAAAAA+TGG | - | chr8.2:32457548-32457567 | MS.gene93041:CDS | 30.0% |
| !!! | TTTATTTTGTCTTCACCCTT+CGG | + | chr8.2:32456601-32456620 | None:intergenic | 30.0% |
| !!! | TTTTAGGATGAGTATGATGA+CGG | + | chr8.2:32456753-32456772 | None:intergenic | 30.0% |
| !!! | TTTTGCGAAATTTTTTTCGG+AGG | + | chr8.2:32457046-32457065 | None:intergenic | 30.0% |
| AAAAAATGGAGGACTCTCAT+TGG | + | chr8.2:32455466-32455485 | None:intergenic | 35.0% | |
| AAGCTATCCTAGAGAGTTTA+TGG | - | chr8.2:32454716-32454735 | MS.gene93041:intron | 35.0% | |
| AAGGAACTCAGAACATAGTA+GGG | - | chr8.2:32456323-32456342 | MS.gene93041:intron | 35.0% | |
| AATTGATGAATTTGAGGACG+AGG | - | chr8.2:32457619-32457638 | MS.gene93041:CDS | 35.0% | |
| ACTGACATAAGCACTTGTTT+GGG | + | chr8.2:32454808-32454827 | None:intergenic | 35.0% | |
| ATCAACCAATGTCTCAAATG+TGG | + | chr8.2:32455958-32455977 | None:intergenic | 35.0% | |
| CATTAACCTATGTTTGTCAC+CGG | - | chr8.2:32454996-32455015 | MS.gene93041:intron | 35.0% | |
| CTTCGGTTCTTAGAGTAAAT+GGG | + | chr8.2:32456584-32456603 | None:intergenic | 35.0% | |
| CTTGTCTAGAAATCACGAAT+TGG | - | chr8.2:32455915-32455934 | MS.gene93041:CDS | 35.0% | |
| GGATTGGGATAAAAATGGAA+TGG | - | chr8.2:32457553-32457572 | MS.gene93041:CDS | 35.0% | |
| GGTAGGTTTCTACTTCAAAT+TGG | - | chr8.2:32454440-32454459 | MS.gene93041:intron | 35.0% | |
| GGTATGACATGAAAAAATGG+AGG | + | chr8.2:32455477-32455496 | None:intergenic | 35.0% | |
| GGTTGGAATTGATGAATTTG+AGG | - | chr8.2:32457613-32457632 | MS.gene93041:CDS | 35.0% | |
| GTATTCCTCATATTGTGTGT+AGG | - | chr8.2:32456356-32456375 | MS.gene93041:intron | 35.0% | |
| GTTATAAAAGTGGGATGATG+TGG | - | chr8.2:32455514-32455533 | MS.gene93041:intron | 35.0% | |
| TAAGGAACTCAGAACATAGT+AGG | - | chr8.2:32456322-32456341 | MS.gene93041:intron | 35.0% | |
| TACTGACATAAGCACTTGTT+TGG | + | chr8.2:32454809-32454828 | None:intergenic | 35.0% | |
| TCTTAGACAAGAATAAGGAC+GGG | - | chr8.2:32455988-32456007 | MS.gene93041:intron | 35.0% | |
| TGGTTAGTAAATTCTGACCA+AGG | + | chr8.2:32456535-32456554 | None:intergenic | 35.0% | |
| TTGCCAAAATGCAGAAGAAA+TGG | - | chr8.2:32457532-32457551 | MS.gene93041:CDS | 35.0% | |
| ! | ACATTGATTGAGAGAGCTTA+TGG | + | chr8.2:32454785-32454804 | None:intergenic | 35.0% |
| ! | CAACTGACCAAATCTTTTCA+TGG | + | chr8.2:32456087-32456106 | None:intergenic | 35.0% |
| ! | CATTTACTCTAAGAACCGAA+GGG | - | chr8.2:32456583-32456602 | MS.gene93041:intron | 35.0% |
| ! | CTGAAGCTCTCATCAATTTT+TGG | + | chr8.2:32454392-32454411 | None:intergenic | 35.0% |
| ! | GCTGGAAATTTCTTTTTCTG+AGG | - | chr8.2:32455150-32455169 | MS.gene93041:intron | 35.0% |
| ! | GTAAATGGGCTTTCATAATC+CGG | + | chr8.2:32456570-32456589 | None:intergenic | 35.0% |
| ! | GTGAATCACCCAAAAAGTTT+TGG | - | chr8.2:32454264-32454283 | MS.gene93041:CDS | 35.0% |
| ! | GTTTAATGGGCCTAAAATGT+CGG | - | chr8.2:32455416-32455435 | MS.gene93041:intron | 35.0% |
| ! | TCTGCTACCCAAAACTTTTT+GGG | + | chr8.2:32454275-32454294 | None:intergenic | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+GGG | + | chr8.2:32456863-32456882 | None:intergenic | 35.0% |
| ! | TTCTGCTACCCAAAACTTTT+TGG | + | chr8.2:32454276-32454295 | None:intergenic | 35.0% |
| !! | GCTACTTCTTGCTTTTACTT+TGG | + | chr8.2:32454546-32454565 | None:intergenic | 35.0% |
| !! | TTTCTTCTGCATTTTGGCAA+AGG | + | chr8.2:32457532-32457551 | None:intergenic | 35.0% |
| AACACACACATGCTCATCTT+AGG | - | chr8.2:32456164-32456183 | MS.gene93041:intron | 40.0% | |
| AACCAAGCTTGAGGCTAAAA+TGG | - | chr8.2:32454295-32454314 | MS.gene93041:CDS | 40.0% | |
| ACCAAGTGATTGGACTAAAG+TGG | - | chr8.2:32456443-32456462 | MS.gene93041:intron | 40.0% | |
| ACCACTTTAGTCCAATCACT+TGG | + | chr8.2:32456447-32456466 | None:intergenic | 40.0% | |
| AGCAATGCAATGTAGTAGGA+AGG | - | chr8.2:32455809-32455828 | MS.gene93041:CDS | 40.0% | |
| ATGAGAGCTTCAGAAAATGC+AGG | - | chr8.2:32454399-32454418 | MS.gene93041:intron | 40.0% | |
| CCCATTAGAATCTTCATCTG+CGG | + | chr8.2:32455092-32455111 | None:intergenic | 40.0% | |
| CCGCAGATGAAGATTCTAAT+GGG | - | chr8.2:32455089-32455108 | MS.gene93041:intron | 40.0% | |
| CCTTCGGTTCTTAGAGTAAA+TGG | + | chr8.2:32456585-32456604 | None:intergenic | 40.0% | |
| CGCAGATGAAGATTCTAATG+GGG | - | chr8.2:32455090-32455109 | MS.gene93041:intron | 40.0% | |
| CTGAAGCAATGCAATGTAGT+AGG | - | chr8.2:32455805-32455824 | MS.gene93041:CDS | 40.0% | |
| GACAACCTACACACAATATG+AGG | + | chr8.2:32456364-32456383 | None:intergenic | 40.0% | |
| GTCAGAATTTACTAACCACC+CGG | - | chr8.2:32456537-32456556 | MS.gene93041:intron | 40.0% | |
| TCATTCAAAGGCTTCAACAG+TGG | - | chr8.2:32454965-32454984 | MS.gene93041:intron | 40.0% | |
| TGAGAGCTTCAGAAAATGCA+GGG | - | chr8.2:32454400-32454419 | MS.gene93041:intron | 40.0% | |
| TGTGTTCAAGCAAGCTTGAA+TGG | + | chr8.2:32456150-32456169 | None:intergenic | 40.0% | |
| ! | AAATGGTGGAAGCAATGCAA+CGG | - | chr8.2:32454312-32454331 | MS.gene93041:CDS | 40.0% |
| ! | CCATTTACTCTAAGAACCGA+AGG | - | chr8.2:32456582-32456601 | MS.gene93041:intron | 40.0% |
| ! | CTTACAAGGTCGCAATTTTG+TGG | + | chr8.2:32456864-32456883 | None:intergenic | 40.0% |
| ! | TACAAGGTCGCAATTTTGTG+GGG | + | chr8.2:32456862-32456881 | None:intergenic | 40.0% |
| ! | TCTTTTCGCATTTACACGGT+GGG | - | chr8.2:32457592-32457611 | MS.gene93041:CDS | 40.0% |
| ! | TTCTTTTCGCATTTACACGG+TGG | - | chr8.2:32457591-32457610 | MS.gene93041:CDS | 40.0% |
| !! | ACAAATAGAACAGGAGTACC+CGG | - | chr8.2:32456486-32456505 | MS.gene93041:intron | 40.0% |
| !! | GAAGAAGTGTTTCAGTAAGC+TGG | - | chr8.2:32455132-32455151 | MS.gene93041:intron | 40.0% |
| AATTGGCATGCCAAATCTGG+AGG | - | chr8.2:32455932-32455951 | MS.gene93041:CDS | 45.0% | |
| ACCAAGGATTGTTCCAGTCA+GGG | + | chr8.2:32456519-32456538 | None:intergenic | 45.0% | |
| ACGAATTGGCATGCCAAATC+TGG | - | chr8.2:32455929-32455948 | MS.gene93041:CDS | 45.0% | |
| CAAGCTTGAGGCTAAAATGG+TGG | - | chr8.2:32454298-32454317 | MS.gene93041:CDS | 45.0% | |
| CATGAAACACTGCGGCTATT+CGG | - | chr8.2:32454866-32454885 | MS.gene93041:intron | 45.0% | |
| CCATCTTTGAGCAGTTTGGT+AGG | - | chr8.2:32454423-32454442 | MS.gene93041:intron | 45.0% | |
| CCTACCAAACTGCTCAAAGA+TGG | + | chr8.2:32454426-32454445 | None:intergenic | 45.0% | |
| CTTACGACATGTCCAAAAGC+TGG | + | chr8.2:32454756-32454775 | None:intergenic | 45.0% | |
| GCCGCAGATGAAGATTCTAA+TGG | - | chr8.2:32455088-32455107 | MS.gene93041:intron | 45.0% | |
| GCCTAGATCATGAAACACTG+CGG | - | chr8.2:32454858-32454877 | MS.gene93041:intron | 45.0% | |
| GGCTTTCATAATCCGGAGTT+CGG | + | chr8.2:32456563-32456582 | None:intergenic | 45.0% | |
| GGGATGATGTGGGAAAATAG+TGG | - | chr8.2:32455525-32455544 | MS.gene93041:intron | 45.0% | |
| TCAAATGTGGCCTCCAGATT+TGG | + | chr8.2:32455945-32455964 | None:intergenic | 45.0% | |
| TTCCAGTCAGGGTTTAAACC+CGG | + | chr8.2:32456508-32456527 | None:intergenic | 45.0% | |
| !! | AGGATGAGTATGATGACGGT+TGG | + | chr8.2:32456749-32456768 | None:intergenic | 45.0% |
| !! | ATACTGCATGAAGTGCTGCA+GGG | + | chr8.2:32455282-32455301 | None:intergenic | 45.0% |
| !! | CAAATAGAACAGGAGTACCC+GGG | - | chr8.2:32456487-32456506 | MS.gene93041:intron | 45.0% |
| !! | CACCATTTTAGCCTCAAGCT+TGG | + | chr8.2:32454300-32454319 | None:intergenic | 45.0% |
| ACCCTGACTGGAACAATCCT+TGG | - | chr8.2:32456515-32456534 | MS.gene93041:intron | 50.0% | |
| AGGGCCATCTTTGAGCAGTT+TGG | - | chr8.2:32454419-32454438 | MS.gene93041:intron | 50.0% | |
| ATGCAACGGAGGGAATGTCA+AGG | - | chr8.2:32454326-32454345 | MS.gene93041:CDS | 50.0% | |
| CAATTTGGCCATGCATGTGC+CGG | + | chr8.2:32455018-32455037 | None:intergenic | 50.0% | |
| GACCAAGGATTGTTCCAGTC+AGG | + | chr8.2:32456520-32456539 | None:intergenic | 50.0% | |
| GCCGCAGTGTTTCATGATCT+AGG | + | chr8.2:32454862-32454881 | None:intergenic | 50.0% | |
| GGCACTTGAGTGCATATGTG+TGG | + | chr8.2:32456129-32456148 | None:intergenic | 50.0% | |
| GGTAGCAGAAACCAAGCTTG+AGG | - | chr8.2:32454286-32454305 | MS.gene93041:CDS | 50.0% | |
| GTCTTGTGCATTCTGACCTC+TGG | - | chr8.2:32455331-32455350 | MS.gene93041:intron | 50.0% | |
| TCCAGTCAGGGTTTAAACCC+GGG | + | chr8.2:32456507-32456526 | None:intergenic | 50.0% | |
| TCTTCCAGAAGAACGTTCCC+CGG | + | chr8.2:32456060-32456079 | None:intergenic | 50.0% | |
| TTCATAATCCGGAGTTCGGC+CGG | + | chr8.2:32456559-32456578 | None:intergenic | 50.0% | |
| TTCGCATTTACACGGTGGGT+TGG | - | chr8.2:32457596-32457615 | MS.gene93041:CDS | 50.0% | |
| ! | ATGGGAGGTGCAATGGGAAA+GGG | - | chr8.2:32454242-32454261 | MS.gene93041:CDS | 50.0% |
| ! | CATGTGCCGGTGACAAACAT+AGG | + | chr8.2:32455005-32455024 | None:intergenic | 50.0% |
| ! | CTGCAGGGTCATCTTTGAGA+AGG | + | chr8.2:32455267-32455286 | None:intergenic | 50.0% |
| ! | GGAGGCCACATTTGAGACAT+TGG | - | chr8.2:32455950-32455969 | MS.gene93041:CDS | 50.0% |
| !! | GATACTGCATGAAGTGCTGC+AGG | + | chr8.2:32455283-32455302 | None:intergenic | 50.0% |
| ACATCCGGGGAACGTTCTTC+TGG | - | chr8.2:32456053-32456072 | MS.gene93041:intron | 55.0% | |
| ACCCGGGTTTAAACCCTGAC+TGG | - | chr8.2:32456503-32456522 | MS.gene93041:intron | 55.0% | |
| GGTGGAAGCAATGCAACGGA+GGG | - | chr8.2:32454316-32454335 | MS.gene93041:CDS | 55.0% | |
| GTTTGTCACCGGCACATGCA+TGG | - | chr8.2:32455007-32455026 | MS.gene93041:intron | 55.0% | |
| TCATAATCCGGAGTTCGGCC+GGG | + | chr8.2:32456558-32456577 | None:intergenic | 55.0% | |
| TGGTGGAAGCAATGCAACGG+AGG | - | chr8.2:32454315-32454334 | MS.gene93041:CDS | 55.0% | |
| CTAACCACCCGGCCGAACTC+CGG | - | chr8.2:32456548-32456567 | MS.gene93041:intron | 65.0% | |
| TAATCCGGAGTTCGGCCGGG+TGG | + | chr8.2:32456555-32456574 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 32454242 | 32457652 | 32454242 | ID=MS.gene93041 |
| chr8.2 | mRNA | 32454242 | 32457652 | 32454242 | ID=MS.gene93041.t1;Parent=MS.gene93041 |
| chr8.2 | exon | 32457454 | 32457652 | 32457454 | ID=MS.gene93041.t1.exon1;Parent=MS.gene93041.t1 |
| chr8.2 | CDS | 32457454 | 32457652 | 32457454 | ID=cds.MS.gene93041.t1;Parent=MS.gene93041.t1 |
| chr8.2 | exon | 32456597 | 32456799 | 32456597 | ID=MS.gene93041.t1.exon2;Parent=MS.gene93041.t1 |
| chr8.2 | CDS | 32456597 | 32456799 | 32456597 | ID=cds.MS.gene93041.t1;Parent=MS.gene93041.t1 |
| chr8.2 | exon | 32455796 | 32455970 | 32455796 | ID=MS.gene93041.t1.exon3;Parent=MS.gene93041.t1 |
| chr8.2 | CDS | 32455796 | 32455970 | 32455796 | ID=cds.MS.gene93041.t1;Parent=MS.gene93041.t1 |
| chr8.2 | exon | 32454242 | 32454348 | 32454242 | ID=MS.gene93041.t1.exon4;Parent=MS.gene93041.t1 |
| chr8.2 | CDS | 32454242 | 32454348 | 32454242 | ID=cds.MS.gene93041.t1;Parent=MS.gene93041.t1 |
| Gene Sequence |
| Protein sequence |
