Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053466.t1 | XP_003591273.1 | 90.6 | 684 | 56 | 3 | 8 | 690 | 59 | 735 | 0.00E+00 | 1242.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053466.t1 | O82462 | 71.8 | 681 | 173 | 5 | 5 | 684 | 54 | 716 | 5.4e-292 | 1004.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053466.t1 | G7IAE3 | 90.6 | 684 | 56 | 3 | 8 | 690 | 59 | 735 | 0.0e+00 | 1242.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053466.t1 | MTR_1g085150 | 90.643 | 684 | 56 | 3 | 8 | 690 | 59 | 735 | 0.0 | 1269 |
| MS.gene053466.t1 | MTR_1g110430 | 34.236 | 517 | 306 | 12 | 170 | 665 | 266 | 769 | 1.12e-70 | 246 |
| MS.gene053466.t1 | MTR_8g009900 | 26.638 | 229 | 127 | 6 | 175 | 378 | 55 | 267 | 2.62e-12 | 70.5 |
| MS.gene053466.t1 | MTR_8g009900 | 26.638 | 229 | 127 | 6 | 175 | 378 | 55 | 267 | 4.30e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053466.t1 | AT5G26710 | 71.806 | 681 | 173 | 5 | 5 | 684 | 54 | 716 | 0.0 | 1023 |
| MS.gene053466.t1 | AT1G25350 | 32.752 | 516 | 310 | 12 | 173 | 665 | 269 | 770 | 1.07e-66 | 234 |
| MS.gene053466.t1 | AT1G25350 | 30.902 | 521 | 318 | 13 | 173 | 665 | 269 | 775 | 1.30e-57 | 209 |
| MS.gene053466.t1 | AT5G64050 | 25.833 | 240 | 120 | 7 | 173 | 378 | 52 | 267 | 2.37e-11 | 67.4 |
Find 140 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTAGTTTGTAAAGCATTT+TGG | 0.220833 | 1.4:+29552376 | None:intergenic |
| TCCTTTCTCATTTGTTCATC+TGG | 0.222120 | 1.4:+29550986 | None:intergenic |
| TTGACGACTGGCTGGTCTTT+TGG | 0.223662 | 1.4:+29551400 | None:intergenic |
| ATACTTGTTCAACAATAAAT+TGG | 0.225280 | 1.4:+29550447 | None:intergenic |
| TAGAGGAGAATTTGAAATTA+TGG | 0.240284 | 1.4:-29550922 | MS.gene053466:CDS |
| AATGAATATATTGAATATAT+TGG | 0.243135 | 1.4:-29551457 | MS.gene053466:CDS |
| TGTTTATTATCGTTGCAATT+TGG | 0.246562 | 1.4:-29550807 | MS.gene053466:CDS |
| CGCAATGACCGCAGTGTGTC+TGG | 0.261894 | 1.4:+29550182 | None:intergenic |
| TCAAATTCTCCTCTACAATA+TGG | 0.262255 | 1.4:+29550930 | None:intergenic |
| ATTTGTGGACAATTTGAAAA+AGG | 0.267234 | 1.4:-29551128 | MS.gene053466:CDS |
| CTTATCTACTTCCTTTACTA+TGG | 0.287844 | 1.4:+29549969 | None:intergenic |
| CCTCATCATAGAATTGAAAT+TGG | 0.294664 | 1.4:-29550782 | MS.gene053466:CDS |
| TTACCTCATTACGAAGAAAA+AGG | 0.308169 | 1.4:-29549815 | MS.gene053466:intron |
| TCAGCAAACGAAAGCTTCTA+TGG | 0.315812 | 1.4:-29550565 | MS.gene053466:CDS |
| CGAATTTAGCCGGTTGAATA+TGG | 0.317857 | 1.4:-29550600 | MS.gene053466:CDS |
| AGATTACTTCCCTGAGTTGA+TGG | 0.323642 | 1.4:-29551059 | MS.gene053466:CDS |
| TGGAGAGAAAGGGATATTTC+AGG | 0.324909 | 1.4:-29549307 | MS.gene053466:CDS |
| GATGTCTGCTGCCTGCCATC+TGG | 0.343011 | 1.4:+29549233 | None:intergenic |
| TGAAGATAGCCACTGGGTTC+AGG | 0.349425 | 1.4:+29551259 | None:intergenic |
| GCTATCTGCGCAGGTCTTGC+AGG | 0.353784 | 1.4:-29551697 | MS.gene053466:intron |
| CCCAGTGGCTATCTTCATAT+TGG | 0.358754 | 1.4:-29551253 | MS.gene053466:CDS |
| AAGATACCACATATACAAAA+AGG | 0.360107 | 1.4:-29550065 | MS.gene053466:CDS |
| ACCCTGTGACATTCCCATCT+TGG | 0.408163 | 1.4:+29549944 | None:intergenic |
| TCATGGAATGGGACAAGCTC+TGG | 0.411380 | 1.4:-29550239 | MS.gene053466:CDS |
| GGAAGTAACCTTGATGGATT+GGG | 0.417880 | 1.4:-29549998 | MS.gene053466:CDS |
| AGTATTGCAGCTGGAGAGAA+AGG | 0.419290 | 1.4:-29549318 | MS.gene053466:CDS |
| AGTTGGATACACTTTATACT+TGG | 0.420137 | 1.4:+29550757 | None:intergenic |
| GGATCACGGAGTGATTTGTT+TGG | 0.426882 | 1.4:+29550830 | None:intergenic |
| TTCCAATGTAACGCAAAGAA+AGG | 0.430174 | 1.4:+29552427 | None:intergenic |
| AGGAAGTAACCTTGATGGAT+TGG | 0.439791 | 1.4:-29549999 | MS.gene053466:CDS |
| ACGCTTAAGATATCGCATAT+TGG | 0.440199 | 1.4:+29549346 | None:intergenic |
| CCACAAAACTGAAGCTCACT+TGG | 0.452027 | 1.4:-29549885 | MS.gene053466:CDS |
| AAAGAGGAGATTCTAGCATA+TGG | 0.452110 | 1.4:-29549374 | MS.gene053466:CDS |
| CTTCCCTGAGTTGATGGAAC+TGG | 0.453446 | 1.4:-29551053 | MS.gene053466:CDS |
| TTATGGAAGGAAATGATTGC+AGG | 0.457763 | 1.4:-29550905 | MS.gene053466:CDS |
| AAATCTCAATCTCATGGAAT+GGG | 0.463289 | 1.4:-29550250 | MS.gene053466:CDS |
| AAATTGCAACGATAATAAAC+AGG | 0.467261 | 1.4:+29550809 | None:intergenic |
| CAAGTATATTGATGACTACT+TGG | 0.468006 | 1.4:-29551767 | MS.gene053466:CDS |
| AAAATCTCAATCTCATGGAA+TGG | 0.472161 | 1.4:-29550251 | MS.gene053466:CDS |
| GATAAAGTGAAGAATGTGAA+TGG | 0.472243 | 1.4:-29551376 | MS.gene053466:CDS |
| ATAAAGTGAAGAATGTGAAT+GGG | 0.472454 | 1.4:-29551375 | MS.gene053466:CDS |
| CAGCTTGAGAAAGATGAGAA+TGG | 0.474195 | 1.4:-29549437 | MS.gene053466:CDS |
| TTCTCATCTACGAATTTAGC+CGG | 0.474652 | 1.4:-29550610 | MS.gene053466:CDS |
| TCCAATATGAAGATAGCCAC+TGG | 0.476082 | 1.4:+29551252 | None:intergenic |
| GCAGTGTGTCTGGGACATAC+AGG | 0.479972 | 1.4:+29550192 | None:intergenic |
| TACTTCCTCACCTGCTGATA+CGG | 0.480060 | 1.4:+29550014 | None:intergenic |
| AGCTTGAGAAAGATGAGAAT+GGG | 0.484893 | 1.4:-29549436 | MS.gene053466:CDS |
| ATGTCTGCTGCCTGCCATCT+GGG | 0.485977 | 1.4:+29549234 | None:intergenic |
| TCCAATGTAACGCAAAGAAA+GGG | 0.490189 | 1.4:+29552428 | None:intergenic |
| AATCAAACTCCGTCAATGTC+AGG | 0.490680 | 1.4:+29549836 | None:intergenic |
| CATAGTAAAGGAAGTAGATA+AGG | 0.490754 | 1.4:-29549968 | MS.gene053466:CDS |
| TGCTGAGCGATACAAAGGTC+AGG | 0.492981 | 1.4:-29551197 | MS.gene053466:CDS |
| GGCGTGCAGTGTTGTGTTCG+TGG | 0.496074 | 1.4:-29550872 | MS.gene053466:CDS |
| GACCAAGATGGGAATGTCAC+AGG | 0.497471 | 1.4:-29549946 | MS.gene053466:CDS |
| TATGCACCTGTACTCTCATC+AGG | 0.500252 | 1.4:-29551811 | MS.gene053466:CDS |
| ACCCTTTCTTTGCGTTACAT+TGG | 0.501029 | 1.4:-29552429 | MS.gene053466:CDS |
| GGACAGGCAAAATCATAAGT+TGG | 0.503923 | 1.4:+29550740 | None:intergenic |
| GAGTGTAGACCATATTCAAC+CGG | 0.504461 | 1.4:+29550591 | None:intergenic |
| GGGATTGCAAATAACACGAT+TGG | 0.508386 | 1.4:+29549254 | None:intergenic |
| ATGCGGACAAATGATTTCTC+AGG | 0.508905 | 1.4:+29550126 | None:intergenic |
| GACGCAGTGTCCGTATCAGC+AGG | 0.509359 | 1.4:-29550024 | MS.gene053466:CDS |
| TTCACTTTATCCTTGACGAC+TGG | 0.509750 | 1.4:+29551388 | None:intergenic |
| TTTCAGGTGCTGGAAAGAGA+TGG | 0.510988 | 1.4:-29551561 | MS.gene053466:intron |
| TCAGCCAGTTCCATCAACTC+AGG | 0.512208 | 1.4:+29551049 | None:intergenic |
| TCTGATAACATTAAGGGAGG+AGG | 0.512500 | 1.4:-29551346 | MS.gene053466:CDS |
| CTTTATCCTTGACGACTGGC+TGG | 0.513178 | 1.4:+29551392 | None:intergenic |
| GCTTAACCCTTGCACAAAAG+AGG | 0.514112 | 1.4:-29549390 | MS.gene053466:CDS |
| GATCTTCCAGATGCTGAAGT+TGG | 0.514176 | 1.4:-29551304 | MS.gene053466:CDS |
| AAAATTAATTAGCCAGGGTA+AGG | 0.515011 | 1.4:-29551026 | MS.gene053466:CDS |
| GGCATTTCCCCAATCCATCA+AGG | 0.517350 | 1.4:+29549990 | None:intergenic |
| AAAAGAAGAAGTTGAATCAT+GGG | 0.518969 | 1.4:-29550534 | MS.gene053466:CDS |
| AAATGCTTTACAAACTAGCC+AGG | 0.520170 | 1.4:-29552373 | MS.gene053466:intron |
| CCTTCACGAGCATCAACAAA+TGG | 0.521928 | 1.4:+29550719 | None:intergenic |
| TAAGGGAGGAGGCAAGGCTT+CGG | 0.522289 | 1.4:-29551335 | MS.gene053466:CDS |
| ACTAGTTAGCCTGACATTGA+CGG | 0.523373 | 1.4:-29549845 | MS.gene053466:CDS |
| AAGGTATCACTCATGCCCTT+CGG | 0.524399 | 1.4:-29550700 | MS.gene053466:CDS |
| TTCAGGTGCTGGAAAGAGAT+GGG | 0.528173 | 1.4:-29551560 | MS.gene053466:intron |
| TCCAGATGAACAAATGAGAA+AGG | 0.528927 | 1.4:-29550987 | MS.gene053466:CDS |
| GCAACTCTTCCTAATTCCTA+TGG | 0.529242 | 1.4:-29552399 | MS.gene053466:CDS |
| GAAGTAGATAAGGACCAAGA+TGG | 0.533557 | 1.4:-29549958 | MS.gene053466:CDS |
| GGAGAATTTGAAATTATGGA+AGG | 0.534607 | 1.4:-29550918 | MS.gene053466:CDS |
| GCGTGGAGAAGTATTGCAGC+TGG | 0.537955 | 1.4:-29549327 | MS.gene053466:CDS |
| ATGAGAAAGGAGAGAAGGGC+TGG | 0.540375 | 1.4:-29550974 | MS.gene053466:CDS |
| GGGAATGTCACAGGGTTAAG+TGG | 0.540528 | 1.4:-29549937 | MS.gene053466:CDS |
| ATCGTAATGCTCAGTATCAC+AGG | 0.540697 | 1.4:-29550661 | MS.gene053466:CDS |
| CAGCCAGTTCCATCAACTCA+GGG | 0.544119 | 1.4:+29551050 | None:intergenic |
| AGGTGAGGAAGTAACCTTGA+TGG | 0.551874 | 1.4:-29550004 | MS.gene053466:CDS |
| TATTTGCAATCCCAGATGGC+AGG | 0.556570 | 1.4:-29549244 | MS.gene053466:CDS |
| GTGTTATTTGCAATCCCAGA+TGG | 0.560737 | 1.4:-29549248 | MS.gene053466:CDS |
| AAGTAGATAAGGACCAAGAT+GGG | 0.560937 | 1.4:-29549957 | MS.gene053466:CDS |
| GCAATGACCGCAGTGTGTCT+GGG | 0.562664 | 1.4:+29550183 | None:intergenic |
| GCGTGCAGTGTTGTGTTCGT+GGG | 0.566052 | 1.4:-29550871 | MS.gene053466:CDS |
| ACGAGCATCAACAAATGGAC+AGG | 0.568037 | 1.4:+29550724 | None:intergenic |
| CGCACAATTCCTTGCACTGT+AGG | 0.569571 | 1.4:+29550497 | None:intergenic |
| AACAAATGAGAAAGGAGAGA+AGG | 0.571514 | 1.4:-29550979 | MS.gene053466:CDS |
| CCAATTTCAATTCTATGATG+AGG | 0.571584 | 1.4:+29550782 | None:intergenic |
| TTGGGGAAATGCCATAGTAA+AGG | 0.578640 | 1.4:-29549980 | MS.gene053466:CDS |
| TCACAGGATTCAAGAGGACA+TGG | 0.578665 | 1.4:-29550645 | MS.gene053466:CDS |
| GCAGGGCCTGATGAGAGTAC+AGG | 0.580273 | 1.4:+29551805 | None:intergenic |
| CCACGATTTCCTACAGTGCA+AGG | 0.583620 | 1.4:-29550506 | MS.gene053466:CDS |
| CTAACTAGTTCGTCTAACTC+AGG | 0.584002 | 1.4:+29549859 | None:intergenic |
| ACGATGGTACAATTCAATAG+TGG | 0.586943 | 1.4:-29551500 | MS.gene053466:CDS |
| GTGTTGTGTTCGTGGGAAGT+TGG | 0.589845 | 1.4:-29550864 | MS.gene053466:CDS |
| GCAGATCTAGCTATCTGCGC+AGG | 0.590365 | 1.4:-29551706 | MS.gene053466:CDS |
| CCTTGCACTGTAGGAAATCG+TGG | 0.592445 | 1.4:+29550506 | None:intergenic |
| TAACATTAAGGGAGGAGGCA+AGG | 0.593223 | 1.4:-29551341 | MS.gene053466:CDS |
| ACAAATGAGAAAGGAGAGAA+GGG | 0.595565 | 1.4:-29550978 | MS.gene053466:CDS |
| GTGGTATTCACTTGACCGAA+GGG | 0.600221 | 1.4:+29550685 | None:intergenic |
| AATGATTGCAGGATCAGAGA+GGG | 0.601106 | 1.4:-29550894 | MS.gene053466:CDS |
| GAAAGAGATGGGAAAGCTTG+AGG | 0.602516 | 1.4:-29551549 | MS.gene053466:CDS |
| TGCAAGGGTTAAGCACGTCA+AGG | 0.602620 | 1.4:+29549399 | None:intergenic |
| CATTTGTCCGCATCATACCT+AGG | 0.604356 | 1.4:-29550116 | MS.gene053466:CDS |
| AAAAGACCAGCCAGTCGTCA+AGG | 0.611058 | 1.4:-29551398 | MS.gene053466:CDS |
| CCATTTGTTGATGCTCGTGA+AGG | 0.612122 | 1.4:-29550719 | MS.gene053466:CDS |
| CAGTGTGTCTGGGACATACA+GGG | 0.618476 | 1.4:+29550193 | None:intergenic |
| TAAAGTGAAGAATGTGAATG+GGG | 0.619059 | 1.4:-29551374 | MS.gene053466:CDS |
| GTATTGCAGCTGGAGAGAAA+GGG | 0.620537 | 1.4:-29549317 | MS.gene053466:CDS |
| CGTGGTATTCACTTGACCGA+AGG | 0.620830 | 1.4:+29550684 | None:intergenic |
| CCAATATGAAGATAGCCACT+GGG | 0.621615 | 1.4:+29551253 | None:intergenic |
| ATGCAGAAACCATATTGTAG+AGG | 0.630682 | 1.4:-29550939 | MS.gene053466:CDS |
| GTATTGTTAACCCTCACTGA+TGG | 0.633663 | 1.4:-29550150 | MS.gene053466:CDS |
| AATATGCGATATCTTAAGCG+TGG | 0.633685 | 1.4:-29549344 | MS.gene053466:CDS |
| GATACTGAGCATTACGATCG+TGG | 0.634209 | 1.4:+29550666 | None:intergenic |
| AGTGTCCGTATCAGCAGGTG+AGG | 0.636587 | 1.4:-29550019 | MS.gene053466:CDS |
| ACCAAGATGGGAATGTCACA+GGG | 0.639741 | 1.4:-29549945 | MS.gene053466:CDS |
| AACGATAATAAACAGGATCA+CGG | 0.648773 | 1.4:+29550816 | None:intergenic |
| CGATTTGCACCTGAACCCAG+TGG | 0.648921 | 1.4:-29551268 | MS.gene053466:CDS |
| AATTCAATAGTGGCAGAACA+TGG | 0.653058 | 1.4:-29551490 | MS.gene053466:CDS |
| TTTCTCAGGACCATCAGTGA+GGG | 0.655675 | 1.4:+29550140 | None:intergenic |
| GAAGTAACCTTGATGGATTG+GGG | 0.667338 | 1.4:-29549997 | MS.gene053466:CDS |
| TCAGTATCACAGGATTCAAG+AGG | 0.673861 | 1.4:-29550651 | MS.gene053466:CDS |
| CAGACACACTGCGGTCATTG+CGG | 0.674648 | 1.4:-29550181 | MS.gene053466:CDS |
| GTGCAAGGAATTGTGCGTAG+AGG | 0.676449 | 1.4:-29550491 | MS.gene053466:CDS |
| ATTTCTCAGGACCATCAGTG+AGG | 0.679162 | 1.4:+29550139 | None:intergenic |
| AATATCAAAATCTTGCACGA+TGG | 0.684460 | 1.4:-29551516 | MS.gene053466:CDS |
| CACAGGATTCAAGAGGACAT+GGG | 0.686727 | 1.4:-29550644 | MS.gene053466:CDS |
| CATCAACATATGCCTTACCC+TGG | 0.687143 | 1.4:+29551014 | None:intergenic |
| AAATGATTGCAGGATCAGAG+AGG | 0.689019 | 1.4:-29550895 | MS.gene053466:CDS |
| ATGATTGCAGGATCAGAGAG+GGG | 0.699565 | 1.4:-29550893 | MS.gene053466:CDS |
| TGTATGTCCCAGACACACTG+CGG | 0.755590 | 1.4:-29550190 | MS.gene053466:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAATATATTGAATATAT+TGG | - | chr1.4:29550207-29550226 | MS.gene053466:CDS | 10.0% |
| !! | AAAAGAAAAAAAAGAATTTG+TGG | - | chr1.4:29550521-29550540 | MS.gene053466:CDS | 15.0% |
| !! | ACAAATTCTTATAACATATA+TGG | + | chr1.4:29551996-29552015 | None:intergenic | 15.0% |
| !! | ATAAGAAATACAATAGAATA+TGG | - | chr1.4:29551296-29551315 | MS.gene053466:CDS | 15.0% |
| !! | TTTGTTAATTAGAATTCTAT+AGG | - | chr1.4:29549625-29549644 | MS.gene053466:intron | 15.0% |
| !!! | AATTCTTTTTTTTCTTTTTC+AGG | + | chr1.4:29550519-29550538 | None:intergenic | 15.0% |
| !!! | ATGTTATAAGAATTTGTTAA+CGG | - | chr1.4:29551999-29552018 | MS.gene053466:intron | 15.0% |
| !!! | GTCAATAATTTTTTTATTGA+TGG | + | chr1.4:29551452-29551471 | None:intergenic | 15.0% |
| !! | AAGCAAATAAAAACTTAAAC+AGG | + | chr1.4:29552201-29552220 | None:intergenic | 20.0% |
| !! | AGCAAATAAAAACTTAAACA+GGG | + | chr1.4:29552200-29552219 | None:intergenic | 20.0% |
| !! | ATACTTGTTCAACAATAAAT+TGG | + | chr1.4:29551220-29551239 | None:intergenic | 20.0% |
| !! | ATATATCAGAAAAAATAACC+TGG | + | chr1.4:29549312-29549331 | None:intergenic | 20.0% |
| !! | ATTCTTATAACATATATGGA+AGG | + | chr1.4:29551992-29552011 | None:intergenic | 20.0% |
| !! | ATTGAATATATTGGCAAAAA+AGG | - | chr1.4:29550216-29550235 | MS.gene053466:CDS | 20.0% |
| !!! | GAGTTTTTAATTGTCTTTTA+AGG | - | chr1.4:29549397-29549416 | MS.gene053466:CDS | 20.0% |
| !!! | GATTTTTCTGATAACATTAA+GGG | - | chr1.4:29550312-29550331 | MS.gene053466:intron | 20.0% |
| !!! | TTTGTTTCTGTCATTAATAA+AGG | - | chr1.4:29551889-29551908 | MS.gene053466:intron | 20.0% |
| ! | AAAAAGAAGAAGTTGAATCA+TGG | - | chr1.4:29551129-29551148 | MS.gene053466:CDS | 25.0% |
| ! | AAAAGAAGAAGTTGAATCAT+GGG | - | chr1.4:29551130-29551149 | MS.gene053466:CDS | 25.0% |
| ! | AAATTGCAACGATAATAAAC+AGG | + | chr1.4:29550858-29550877 | None:intergenic | 25.0% |
| ! | AAGATACCACATATACAAAA+AGG | - | chr1.4:29551599-29551618 | MS.gene053466:intron | 25.0% |
| ! | AATAAGTTGTTTAACCAAAC+AGG | + | chr1.4:29549424-29549443 | None:intergenic | 25.0% |
| ! | ATAAAGTGAAGAATGTGAAT+GGG | - | chr1.4:29550289-29550308 | MS.gene053466:intron | 25.0% |
| ! | ATATATTGGCAAAAAAGGAT+CGG | - | chr1.4:29550221-29550240 | MS.gene053466:CDS | 25.0% |
| ! | ATCAAAAAATCTCAATCTCA+TGG | - | chr1.4:29551408-29551427 | MS.gene053466:CDS | 25.0% |
| ! | ATGATAAACACTTACGTATT+AGG | - | chr1.4:29549470-29549489 | MS.gene053466:intron | 25.0% |
| ! | ATTTGTGGACAATTTGAAAA+AGG | - | chr1.4:29550536-29550555 | MS.gene053466:CDS | 25.0% |
| ! | GATTGATTGACAATAGTTTA+GGG | - | chr1.4:29549678-29549697 | MS.gene053466:intron | 25.0% |
| ! | TAAGTGATGTTGTCTAAAAA+TGG | - | chr1.4:29549375-29549394 | MS.gene053466:CDS | 25.0% |
| ! | TATCACAGGTAAAAATGAAT+AGG | + | chr1.4:29550018-29550037 | None:intergenic | 25.0% |
| ! | TGATAAACACTTACGTATTA+GGG | - | chr1.4:29549471-29549490 | MS.gene053466:intron | 25.0% |
| ! | TGATTGATTGACAATAGTTT+AGG | - | chr1.4:29549677-29549696 | MS.gene053466:intron | 25.0% |
| ! | TGTTTATTATCGTTGCAATT+TGG | - | chr1.4:29550857-29550876 | MS.gene053466:CDS | 25.0% |
| !! | GGATTTTTCTGATAACATTA+AGG | - | chr1.4:29550311-29550330 | MS.gene053466:intron | 25.0% |
| !! | TAGAGGAGAATTTGAAATTA+TGG | - | chr1.4:29550742-29550761 | MS.gene053466:CDS | 25.0% |
| !!! | AAGCTATTCGCTATTTTTTT+AGG | - | chr1.4:29549601-29549620 | MS.gene053466:intron | 25.0% |
| !!! | AGACATAGTTTTGAGTTTAT+AGG | - | chr1.4:29549505-29549524 | MS.gene053466:intron | 25.0% |
| !!! | AGCTATTCGCTATTTTTTTA+GGG | - | chr1.4:29549602-29549621 | MS.gene053466:intron | 25.0% |
| !!! | ATAGTTTTGAGTTTATAGGT+TGG | - | chr1.4:29549509-29549528 | MS.gene053466:intron | 25.0% |
| AAAAAGGATGTTGAGATGTT+GGG | - | chr1.4:29550552-29550571 | MS.gene053466:CDS | 30.0% | |
| AAAATCTCAATCTCATGGAA+TGG | - | chr1.4:29551413-29551432 | MS.gene053466:CDS | 30.0% | |
| AAAATTAATTAGCCAGGGTA+AGG | - | chr1.4:29550638-29550657 | MS.gene053466:CDS | 30.0% | |
| AAATCTCAATCTCATGGAAT+GGG | - | chr1.4:29551414-29551433 | MS.gene053466:CDS | 30.0% | |
| AACGATAATAAACAGGATCA+CGG | + | chr1.4:29550851-29550870 | None:intergenic | 30.0% | |
| AATATCAAAATCTTGCACGA+TGG | - | chr1.4:29550148-29550167 | MS.gene053466:CDS | 30.0% | |
| AGACTTAGTAATAGTATCAC+AGG | + | chr1.4:29550032-29550051 | None:intergenic | 30.0% | |
| AGGTAAAAATGAATAGGCAT+AGG | + | chr1.4:29550012-29550031 | None:intergenic | 30.0% | |
| AGTTGGATACACTTTATACT+TGG | + | chr1.4:29550910-29550929 | None:intergenic | 30.0% | |
| ATATATGGAAGGTTCATGAT+TGG | + | chr1.4:29551981-29552000 | None:intergenic | 30.0% | |
| ATCTGAAAAGTCAAAGAAAC+AGG | + | chr1.4:29549817-29549836 | None:intergenic | 30.0% | |
| CATAGTAAAGGAAGTAGATA+AGG | - | chr1.4:29551696-29551715 | MS.gene053466:intron | 30.0% | |
| CCAATTTCAATTCTATGATG+AGG | + | chr1.4:29550885-29550904 | None:intergenic | 30.0% | |
| CCACATATACAAAAAGGATA+TGG | - | chr1.4:29551605-29551624 | MS.gene053466:intron | 30.0% | |
| CCTCATCATAGAATTGAAAT+TGG | - | chr1.4:29550882-29550901 | MS.gene053466:CDS | 30.0% | |
| CTTATCTACTTCCTTTACTA+TGG | + | chr1.4:29551698-29551717 | None:intergenic | 30.0% | |
| GATAAAGTGAAGAATGTGAA+TGG | - | chr1.4:29550288-29550307 | MS.gene053466:intron | 30.0% | |
| GCTGAAAAATTAATTAGCCA+GGG | - | chr1.4:29550633-29550652 | MS.gene053466:CDS | 30.0% | |
| GGACAATAATAAGGACAATA+TGG | + | chr1.4:29552073-29552092 | None:intergenic | 30.0% | |
| GTCAATCAATCAGTCAATTT+GGG | + | chr1.4:29549669-29549688 | None:intergenic | 30.0% | |
| TAAAGTGAAGAATGTGAATG+GGG | - | chr1.4:29550290-29550309 | MS.gene053466:intron | 30.0% | |
| TATAGGAGAGTGATAGTTTA+AGG | - | chr1.4:29549642-29549661 | MS.gene053466:intron | 30.0% | |
| TATATTGGCAAAAAAGGATC+GGG | - | chr1.4:29550222-29550241 | MS.gene053466:CDS | 30.0% | |
| TCAAATTCTCCTCTACAATA+TGG | + | chr1.4:29550737-29550756 | None:intergenic | 30.0% | |
| TGTCAATCAATCAGTCAATT+TGG | + | chr1.4:29549670-29549689 | None:intergenic | 30.0% | |
| TTACCTCATTACGAAGAAAA+AGG | - | chr1.4:29551849-29551868 | MS.gene053466:intron | 30.0% | |
| TTGTGTCAGTAGAAATTGTA+TGG | + | chr1.4:29551958-29551977 | None:intergenic | 30.0% | |
| TTGTTGAACAAGTATGTACA+AGG | - | chr1.4:29551225-29551244 | MS.gene053466:CDS | 30.0% | |
| TTGTTTAGGGATCAAATTGA+AGG | - | chr1.4:29549751-29549770 | MS.gene053466:intron | 30.0% | |
| ! | ATACCTTTTTCTTCGTAATG+AGG | + | chr1.4:29551855-29551874 | None:intergenic | 30.0% |
| ! | CAAGTATATTGATGACTACT+TGG | - | chr1.4:29549897-29549916 | MS.gene053466:CDS | 30.0% |
| ! | CCATATCCTTTTTGTATATG+TGG | + | chr1.4:29551608-29551627 | None:intergenic | 30.0% |
| ! | GGAGAATTTGAAATTATGGA+AGG | - | chr1.4:29550746-29550765 | MS.gene053466:CDS | 30.0% |
| ! | TCTTTTAAACAACCTTCCTA+TGG | - | chr1.4:29550051-29550070 | MS.gene053466:CDS | 30.0% |
| ! | TGACTTTTCAGATTGATGAA+TGG | - | chr1.4:29549824-29549843 | MS.gene053466:CDS | 30.0% |
| ! | TTTTCTGATAACATTAAGGG+AGG | - | chr1.4:29550315-29550334 | MS.gene053466:intron | 30.0% |
| !! | GTATGCACTTTTAAGAGAAT+GGG | + | chr1.4:29552104-29552123 | None:intergenic | 30.0% |
| !!! | AATAACACGATTGGTTTTGA+AGG | + | chr1.4:29552404-29552423 | None:intergenic | 30.0% |
| AAAGAGGAGATTCTAGCATA+TGG | - | chr1.4:29552290-29552309 | MS.gene053466:intron | 35.0% | |
| AAATGCTTTACAAACTAGCC+AGG | - | chr1.4:29549291-29549310 | MS.gene053466:CDS | 35.0% | |
| AACAAATGAGAAAGGAGAGA+AGG | - | chr1.4:29550685-29550704 | MS.gene053466:CDS | 35.0% | |
| AAGTAGATAAGGACCAAGAT+GGG | - | chr1.4:29551707-29551726 | MS.gene053466:CDS | 35.0% | |
| AATATGCGATATCTTAAGCG+TGG | - | chr1.4:29552320-29552339 | MS.gene053466:intron | 35.0% | |
| AATTCAATAGTGGCAGAACA+TGG | - | chr1.4:29550174-29550193 | MS.gene053466:CDS | 35.0% | |
| ACAAATGAGAAAGGAGAGAA+GGG | - | chr1.4:29550686-29550705 | MS.gene053466:CDS | 35.0% | |
| ACGATGGTACAATTCAATAG+TGG | - | chr1.4:29550164-29550183 | MS.gene053466:CDS | 35.0% | |
| ACGCTTAAGATATCGCATAT+TGG | + | chr1.4:29552321-29552340 | None:intergenic | 35.0% | |
| AGCTTGAGAAAGATGAGAAT+GGG | - | chr1.4:29552228-29552247 | MS.gene053466:intron | 35.0% | |
| ATGCAGAAACCATATTGTAG+AGG | - | chr1.4:29550725-29550744 | MS.gene053466:CDS | 35.0% | |
| GAAAAAGGATGTTGAGATGT+TGG | - | chr1.4:29550551-29550570 | MS.gene053466:CDS | 35.0% | |
| GATCAGGATGGACAATAATA+AGG | + | chr1.4:29552082-29552101 | None:intergenic | 35.0% | |
| GGCTGAAAAATTAATTAGCC+AGG | - | chr1.4:29550632-29550651 | MS.gene053466:CDS | 35.0% | |
| GTGCTATAAAACTAGTTCCA+TGG | + | chr1.4:29552051-29552070 | None:intergenic | 35.0% | |
| TCCAATGTAACGCAAAGAAA+GGG | + | chr1.4:29549239-29549258 | None:intergenic | 35.0% | |
| TCCAGATGAACAAATGAGAA+AGG | - | chr1.4:29550677-29550696 | MS.gene053466:CDS | 35.0% | |
| TCCTTTCTCATTTGTTCATC+TGG | + | chr1.4:29550681-29550700 | None:intergenic | 35.0% | |
| TTATGGAAGGAAATGATTGC+AGG | - | chr1.4:29550759-29550778 | MS.gene053466:CDS | 35.0% | |
| TTCCAATGTAACGCAAAGAA+AGG | + | chr1.4:29549240-29549259 | None:intergenic | 35.0% | |
| TTCCATGGAAAGTTCATGAA+AGG | + | chr1.4:29552036-29552055 | None:intergenic | 35.0% | |
| TTCTCATCTACGAATTTAGC+CGG | - | chr1.4:29551054-29551073 | MS.gene053466:CDS | 35.0% | |
| ! | AACCAAAGTGTCTATGCATA+GGG | + | chr1.4:29552126-29552145 | None:intergenic | 35.0% |
| ! | ACAAAAAGTATGAAGCTGCT+GGG | - | chr1.4:29551572-29551591 | MS.gene053466:intron | 35.0% |
| ! | AGCGATCAACATTTTAAGCA+TGG | + | chr1.4:29551371-29551390 | None:intergenic | 35.0% |
| ! | AGTGGTGTTTTACATCTTGA+AGG | - | chr1.4:29551745-29551764 | MS.gene053466:CDS | 35.0% |
| ! | TATTTTGCTGAGCGATACAA+AGG | - | chr1.4:29550462-29550481 | MS.gene053466:CDS | 35.0% |
| ! | TGCATCCATTTTCAAAAGCA+GGG | + | chr1.4:29549879-29549898 | None:intergenic | 35.0% |
| ! | TTGCATCCATTTTCAAAAGC+AGG | + | chr1.4:29549880-29549899 | None:intergenic | 35.0% |
| !! | ACTTTTAAGAGAATGGGATC+AGG | + | chr1.4:29552098-29552117 | None:intergenic | 35.0% |
| !! | GGTATGCACTTTTAAGAGAA+TGG | + | chr1.4:29552105-29552124 | None:intergenic | 35.0% |
| !! | TTGTAAAGCATTTTGGCCAT+AGG | + | chr1.4:29549284-29549303 | None:intergenic | 35.0% |
| !!! | GAGAAGCGTACATTTTTAGT+TGG | - | chr1.4:29549919-29549938 | MS.gene053466:CDS | 35.0% |
| !!! | GGCTAGTTTGTAAAGCATTT+TGG | + | chr1.4:29549291-29549310 | None:intergenic | 35.0% |
| !!! | TTGTCTTTTAAGGTCCTGTT+TGG | - | chr1.4:29549407-29549426 | MS.gene053466:CDS | 35.0% |
| AAATGATTGCAGGATCAGAG+AGG | - | chr1.4:29550769-29550788 | MS.gene053466:CDS | 40.0% | |
| AATCAAACTCCGTCAATGTC+AGG | + | chr1.4:29551831-29551850 | None:intergenic | 40.0% | |
| AATGATTGCAGGATCAGAGA+GGG | - | chr1.4:29550770-29550789 | MS.gene053466:CDS | 40.0% | |
| ACCCTTTCTTTGCGTTACAT+TGG | - | chr1.4:29549235-29549254 | MS.gene053466:CDS | 40.0% | |
| AGATGACATGAACCATAGGA+AGG | + | chr1.4:29550066-29550085 | None:intergenic | 40.0% | |
| AGTTCAGAGACATAGTTCGA+GGG | - | chr1.4:29549721-29549740 | MS.gene053466:intron | 40.0% | |
| ATCGTAATGCTCAGTATCAC+AGG | - | chr1.4:29551003-29551022 | MS.gene053466:CDS | 40.0% | |
| ATGCGGACAAATGATTTCTC+AGG | + | chr1.4:29551541-29551560 | None:intergenic | 40.0% | |
| ATGGACACTTGAATTTCTCG+TGG | + | chr1.4:29551939-29551958 | None:intergenic | 40.0% | |
| ATGGAGATGACATGAACCAT+AGG | + | chr1.4:29550070-29550089 | None:intergenic | 40.0% | |
| CAGCTTGAGAAAGATGAGAA+TGG | - | chr1.4:29552227-29552246 | MS.gene053466:intron | 40.0% | |
| CCAATATGAAGATAGCCACT+GGG | + | chr1.4:29550414-29550433 | None:intergenic | 40.0% | |
| CGAATTTAGCCGGTTGAATA+TGG | - | chr1.4:29551064-29551083 | MS.gene053466:CDS | 40.0% | |
| CTAACTAGTTCGTCTAACTC+AGG | + | chr1.4:29551808-29551827 | None:intergenic | 40.0% | |
| CTTACGTATTAGGGACTGTT+TGG | - | chr1.4:29549480-29549499 | MS.gene053466:intron | 40.0% | |
| GAAGTAGATAAGGACCAAGA+TGG | - | chr1.4:29551706-29551725 | MS.gene053466:CDS | 40.0% | |
| GACCTTTCATGAACTTTCCA+TGG | - | chr1.4:29552031-29552050 | MS.gene053466:intron | 40.0% | |
| GAGTGTAGACCATATTCAAC+CGG | + | chr1.4:29551076-29551095 | None:intergenic | 40.0% | |
| GCAACTCTTCCTAATTCCTA+TGG | - | chr1.4:29549265-29549284 | MS.gene053466:CDS | 40.0% | |
| GGACAGGCAAAATCATAAGT+TGG | + | chr1.4:29550927-29550946 | None:intergenic | 40.0% | |
| GGGATTGCAAATAACACGAT+TGG | + | chr1.4:29552413-29552432 | None:intergenic | 40.0% | |
| GTATTGTTAACCCTCACTGA+TGG | - | chr1.4:29551514-29551533 | MS.gene053466:CDS | 40.0% | |
| TACCCTATGCATAGACACTT+TGG | - | chr1.4:29552121-29552140 | MS.gene053466:intron | 40.0% | |
| TAGTTCAGAGACATAGTTCG+AGG | - | chr1.4:29549720-29549739 | MS.gene053466:intron | 40.0% | |
| TCAGCAAACGAAAGCTTCTA+TGG | - | chr1.4:29551099-29551118 | MS.gene053466:CDS | 40.0% | |
| TCAGTATCACAGGATTCAAG+AGG | - | chr1.4:29551013-29551032 | MS.gene053466:CDS | 40.0% | |
| TCCAATATGAAGATAGCCAC+TGG | + | chr1.4:29550415-29550434 | None:intergenic | 40.0% | |
| TCTGATAACATTAAGGGAGG+AGG | - | chr1.4:29550318-29550337 | MS.gene053466:intron | 40.0% | |
| TGGAGAGAAAGGGATATTTC+AGG | - | chr1.4:29552357-29552376 | MS.gene053466:intron | 40.0% | |
| TTAAGAGAATGGGATCAGGA+TGG | + | chr1.4:29552094-29552113 | None:intergenic | 40.0% | |
| TTCACTTTATCCTTGACGAC+TGG | + | chr1.4:29550279-29550298 | None:intergenic | 40.0% | |
| TTGATCGCTGTTCTTGTACA+GGG | - | chr1.4:29551382-29551401 | MS.gene053466:CDS | 40.0% | |
| TTGGGGAAATGCCATAGTAA+AGG | - | chr1.4:29551684-29551703 | MS.gene053466:intron | 40.0% | |
| ! | ACTAGTTAGCCTGACATTGA+CGG | - | chr1.4:29551819-29551838 | MS.gene053466:CDS | 40.0% |
| ! | ACTTTTCCAACTTCAGCATC+TGG | + | chr1.4:29550369-29550388 | None:intergenic | 40.0% |
| ! | AGAATCTCCTCTTTTGTGCA+AGG | + | chr1.4:29552284-29552303 | None:intergenic | 40.0% |
| ! | AGATTACTTCCCTGAGTTGA+TGG | - | chr1.4:29550605-29550624 | MS.gene053466:CDS | 40.0% |
| ! | AGGAAGTAACCTTGATGGAT+TGG | - | chr1.4:29551665-29551684 | MS.gene053466:intron | 40.0% |
| ! | CACAAAAAGTATGAAGCTGC+TGG | - | chr1.4:29551571-29551590 | MS.gene053466:intron | 40.0% |
| ! | CATCTACACTATGCCTTTTC+AGG | - | chr1.4:29550087-29550106 | MS.gene053466:CDS | 40.0% |
| ! | CGAAGAAAAAGGTATGTGCT+TGG | - | chr1.4:29551860-29551879 | MS.gene053466:intron | 40.0% |
| ! | CTGAAAAGGCATAGTGTAGA+TGG | + | chr1.4:29550089-29550108 | None:intergenic | 40.0% |
| ! | GAACCAAAGTGTCTATGCAT+AGG | + | chr1.4:29552127-29552146 | None:intergenic | 40.0% |
| ! | GAATCTCCTCTTTTGTGCAA+GGG | + | chr1.4:29552283-29552302 | None:intergenic | 40.0% |
| ! | TTTTGTGCCTAGGTATGATG+CGG | + | chr1.4:29551558-29551577 | None:intergenic | 40.0% |
| !! | GAAGTAACCTTGATGGATTG+GGG | - | chr1.4:29551667-29551686 | MS.gene053466:intron | 40.0% |
| !! | GCATTTTGGCCATAGGAATT+AGG | + | chr1.4:29549277-29549296 | None:intergenic | 40.0% |
| !! | GCTTCATACTTTTTGTGCCT+AGG | + | chr1.4:29551568-29551587 | None:intergenic | 40.0% |
| !! | GGAAGTAACCTTGATGGATT+GGG | - | chr1.4:29551666-29551685 | MS.gene053466:intron | 40.0% |
| !! | GTGTTATTTGCAATCCCAGA+TGG | - | chr1.4:29552416-29552435 | MS.gene053466:CDS | 40.0% |
| ACCAAGATGGGAATGTCACA+GGG | - | chr1.4:29551719-29551738 | MS.gene053466:CDS | 45.0% | |
| ACGAGCATCAACAAATGGAC+AGG | + | chr1.4:29550943-29550962 | None:intergenic | 45.0% | |
| ACTTAAACAGGGAAGCAAGC+AGG | + | chr1.4:29552189-29552208 | None:intergenic | 45.0% | |
| AGGTGAGGAAGTAACCTTGA+TGG | - | chr1.4:29551660-29551679 | MS.gene053466:intron | 45.0% | |
| AGTATTGCAGCTGGAGAGAA+AGG | - | chr1.4:29552346-29552365 | MS.gene053466:intron | 45.0% | |
| ATGATTGCAGGATCAGAGAG+GGG | - | chr1.4:29550771-29550790 | MS.gene053466:CDS | 45.0% | |
| ATTTCTCAGGACCATCAGTG+AGG | + | chr1.4:29551528-29551547 | None:intergenic | 45.0% | |
| CACAGGATTCAAGAGGACAT+GGG | - | chr1.4:29551020-29551039 | MS.gene053466:CDS | 45.0% | |
| CATCAACATATGCCTTACCC+TGG | + | chr1.4:29550653-29550672 | None:intergenic | 45.0% | |
| CATTTGTCCGCATCATACCT+AGG | - | chr1.4:29551548-29551567 | MS.gene053466:CDS | 45.0% | |
| CCACAAAACTGAAGCTCACT+TGG | - | chr1.4:29551779-29551798 | MS.gene053466:CDS | 45.0% | |
| CCCAGTGGCTATCTTCATAT+TGG | - | chr1.4:29550411-29550430 | MS.gene053466:intron | 45.0% | |
| CCTTCACGAGCATCAACAAA+TGG | + | chr1.4:29550948-29550967 | None:intergenic | 45.0% | |
| CGAGGGTGAGTGATTGTTTA+GGG | - | chr1.4:29549738-29549757 | MS.gene053466:intron | 45.0% | |
| GAAAGAGATGGGAAAGCTTG+AGG | - | chr1.4:29550115-29550134 | MS.gene053466:CDS | 45.0% | |
| GATACTGAGCATTACGATCG+TGG | + | chr1.4:29551001-29551020 | None:intergenic | 45.0% | |
| GATCTTCCAGATGCTGAAGT+TGG | - | chr1.4:29550360-29550379 | MS.gene053466:intron | 45.0% | |
| GCTTAACCCTTGCACAAAAG+AGG | - | chr1.4:29552274-29552293 | MS.gene053466:intron | 45.0% | |
| GTATTGCAGCTGGAGAGAAA+GGG | - | chr1.4:29552347-29552366 | MS.gene053466:intron | 45.0% | |
| GTGGTATTCACTTGACCGAA+GGG | + | chr1.4:29550982-29551001 | None:intergenic | 45.0% | |
| GTTGATCGCTGTTCTTGTAC+AGG | - | chr1.4:29551381-29551400 | MS.gene053466:CDS | 45.0% | |
| TAACATTAAGGGAGGAGGCA+AGG | - | chr1.4:29550323-29550342 | MS.gene053466:intron | 45.0% | |
| TACTTCCTCACCTGCTGATA+CGG | + | chr1.4:29551653-29551672 | None:intergenic | 45.0% | |
| TATGCACCTGTACTCTCATC+AGG | - | chr1.4:29549853-29549872 | MS.gene053466:CDS | 45.0% | |
| TATTTGCAATCCCAGATGGC+AGG | - | chr1.4:29552420-29552439 | MS.gene053466:CDS | 45.0% | |
| TCACAGGATTCAAGAGGACA+TGG | - | chr1.4:29551019-29551038 | MS.gene053466:CDS | 45.0% | |
| TCGAGGGTGAGTGATTGTTT+AGG | - | chr1.4:29549737-29549756 | MS.gene053466:intron | 45.0% | |
| TCTCTTTCCAGCACCTGAAA+AGG | + | chr1.4:29550103-29550122 | None:intergenic | 45.0% | |
| TGATCGCTGTTCTTGTACAG+GGG | - | chr1.4:29551383-29551402 | MS.gene053466:CDS | 45.0% | |
| TTTCTCAGGACCATCAGTGA+GGG | + | chr1.4:29551527-29551546 | None:intergenic | 45.0% | |
| ! | AAGGTATCACTCATGCCCTT+CGG | - | chr1.4:29550964-29550983 | MS.gene053466:CDS | 45.0% |
| ! | CCAAGTGAGCTTCAGTTTTG+TGG | + | chr1.4:29551782-29551801 | None:intergenic | 45.0% |
| ! | CCATTTGTTGATGCTCGTGA+AGG | - | chr1.4:29550945-29550964 | MS.gene053466:CDS | 45.0% |
| !! | GGATCACGGAGTGATTTGTT+TGG | + | chr1.4:29550837-29550856 | None:intergenic | 45.0% |
| !! | TCAGGCCCTGCTTTTGAAAA+TGG | - | chr1.4:29549871-29549890 | MS.gene053466:CDS | 45.0% |
| !! | TTCAGGTGCTGGAAAGAGAT+GGG | - | chr1.4:29550104-29550123 | MS.gene053466:CDS | 45.0% |
| !! | TTTCAGGTGCTGGAAAGAGA+TGG | - | chr1.4:29550103-29550122 | MS.gene053466:CDS | 45.0% |
| !!! | GGTTTTGAAGGCTCAACGAA+GGG | + | chr1.4:29552392-29552411 | None:intergenic | 45.0% |
| !!! | TGGTTTTGAAGGCTCAACGA+AGG | + | chr1.4:29552393-29552412 | None:intergenic | 45.0% |
| AAAAGACCAGCCAGTCGTCA+AGG | - | chr1.4:29550266-29550285 | MS.gene053466:intron | 50.0% | |
| ACCCTGTGACATTCCCATCT+TGG | + | chr1.4:29551723-29551742 | None:intergenic | 50.0% | |
| ATGAGAAAGGAGAGAAGGGC+TGG | - | chr1.4:29550690-29550709 | MS.gene053466:CDS | 50.0% | |
| CAGCCAGTTCCATCAACTCA+GGG | + | chr1.4:29550617-29550636 | None:intergenic | 50.0% | |
| CCACGATTTCCTACAGTGCA+AGG | - | chr1.4:29551158-29551177 | MS.gene053466:CDS | 50.0% | |
| CCTTGCACTGTAGGAAATCG+TGG | + | chr1.4:29551161-29551180 | None:intergenic | 50.0% | |
| CGCACAATTCCTTGCACTGT+AGG | + | chr1.4:29551170-29551189 | None:intergenic | 50.0% | |
| CGTGGTATTCACTTGACCGA+AGG | + | chr1.4:29550983-29551002 | None:intergenic | 50.0% | |
| CTTTATCCTTGACGACTGGC+TGG | + | chr1.4:29550275-29550294 | None:intergenic | 50.0% | |
| GACCAAGATGGGAATGTCAC+AGG | - | chr1.4:29551718-29551737 | MS.gene053466:CDS | 50.0% | |
| GATCGCTGTTCTTGTACAGG+GGG | - | chr1.4:29551384-29551403 | MS.gene053466:CDS | 50.0% | |
| GGCATTTCCCCAATCCATCA+AGG | + | chr1.4:29551677-29551696 | None:intergenic | 50.0% | |
| GGGAATGTCACAGGGTTAAG+TGG | - | chr1.4:29551727-29551746 | MS.gene053466:CDS | 50.0% | |
| GTGCAAGGAATTGTGCGTAG+AGG | - | chr1.4:29551173-29551192 | MS.gene053466:CDS | 50.0% | |
| GTGTTGTGTTCGTGGGAAGT+TGG | - | chr1.4:29550800-29550819 | MS.gene053466:CDS | 50.0% | |
| TCAGCCAGTTCCATCAACTC+AGG | + | chr1.4:29550618-29550637 | None:intergenic | 50.0% | |
| TCATGGAATGGGACAAGCTC+TGG | - | chr1.4:29551425-29551444 | MS.gene053466:CDS | 50.0% | |
| TGAAGATAGCCACTGGGTTC+AGG | + | chr1.4:29550408-29550427 | None:intergenic | 50.0% | |
| TGCAAGGGTTAAGCACGTCA+AGG | + | chr1.4:29552268-29552287 | None:intergenic | 50.0% | |
| TGCTGAGCGATACAAAGGTC+AGG | - | chr1.4:29550467-29550486 | MS.gene053466:CDS | 50.0% | |
| TGTATGTCCCAGACACACTG+CGG | - | chr1.4:29551474-29551493 | MS.gene053466:CDS | 50.0% | |
| ! | CAGTGTGTCTGGGACATACA+GGG | + | chr1.4:29551474-29551493 | None:intergenic | 50.0% |
| !! | CTTCCCTGAGTTGATGGAAC+TGG | - | chr1.4:29550611-29550630 | MS.gene053466:CDS | 50.0% |
| !!! | CACTATGCCTTTTCAGGTGC+TGG | - | chr1.4:29550093-29550112 | MS.gene053466:CDS | 50.0% |
| !!! | TTGACGACTGGCTGGTCTTT+TGG | + | chr1.4:29550267-29550286 | None:intergenic | 50.0% |
| AGTGTCCGTATCAGCAGGTG+AGG | - | chr1.4:29551645-29551664 | MS.gene053466:intron | 55.0% | |
| ATGTCTGCTGCCTGCCATCT+GGG | + | chr1.4:29552433-29552452 | None:intergenic | 55.0% | |
| CAGACACACTGCGGTCATTG+CGG | - | chr1.4:29551483-29551502 | MS.gene053466:CDS | 55.0% | |
| CGATTTGCACCTGAACCCAG+TGG | - | chr1.4:29550396-29550415 | MS.gene053466:intron | 55.0% | |
| GCAATGACCGCAGTGTGTCT+GGG | + | chr1.4:29551484-29551503 | None:intergenic | 55.0% | |
| GCAGATCTAGCTATCTGCGC+AGG | - | chr1.4:29549958-29549977 | MS.gene053466:CDS | 55.0% | |
| GCGTGCAGTGTTGTGTTCGT+GGG | - | chr1.4:29550793-29550812 | MS.gene053466:CDS | 55.0% | |
| TAAGGGAGGAGGCAAGGCTT+CGG | - | chr1.4:29550329-29550348 | MS.gene053466:intron | 55.0% | |
| ! | GCAGTGTGTCTGGGACATAC+AGG | + | chr1.4:29551475-29551494 | None:intergenic | 55.0% |
| !! | GCGTGGAGAAGTATTGCAGC+TGG | - | chr1.4:29552337-29552356 | MS.gene053466:intron | 55.0% |
| !!! | GACTGGCTGGTCTTTTGGCT+CGG | + | chr1.4:29550262-29550281 | None:intergenic | 55.0% |
| CGCAATGACCGCAGTGTGTC+TGG | + | chr1.4:29551485-29551504 | None:intergenic | 60.0% | |
| GACGCAGTGTCCGTATCAGC+AGG | - | chr1.4:29551640-29551659 | MS.gene053466:intron | 60.0% | |
| GATGTCTGCTGCCTGCCATC+TGG | + | chr1.4:29552434-29552453 | None:intergenic | 60.0% | |
| GCTATCTGCGCAGGTCTTGC+AGG | - | chr1.4:29549967-29549986 | MS.gene053466:CDS | 60.0% | |
| GGCGTGCAGTGTTGTGTTCG+TGG | - | chr1.4:29550792-29550811 | MS.gene053466:CDS | 60.0% | |
| ! | GCAGGGCCTGATGAGAGTAC+AGG | + | chr1.4:29549862-29549881 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 29549223 | 29552463 | 29549223 | ID=MS.gene053466 |
| chr1.4 | mRNA | 29549223 | 29552463 | 29549223 | ID=MS.gene053466.t1;Parent=MS.gene053466 |
| chr1.4 | exon | 29552374 | 29552463 | 29552374 | ID=MS.gene053466.t1.exon1;Parent=MS.gene053466.t1 |
| chr1.4 | CDS | 29552374 | 29552463 | 29552374 | ID=cds.MS.gene053466.t1;Parent=MS.gene053466.t1 |
| chr1.4 | exon | 29551698 | 29551851 | 29551698 | ID=MS.gene053466.t1.exon2;Parent=MS.gene053466.t1 |
| chr1.4 | CDS | 29551698 | 29551851 | 29551698 | ID=cds.MS.gene053466.t1;Parent=MS.gene053466.t1 |
| chr1.4 | exon | 29550451 | 29551577 | 29550451 | ID=MS.gene053466.t1.exon3;Parent=MS.gene053466.t1 |
| chr1.4 | CDS | 29550451 | 29551577 | 29550451 | ID=cds.MS.gene053466.t1;Parent=MS.gene053466.t1 |
| chr1.4 | exon | 29549816 | 29550283 | 29549816 | ID=MS.gene053466.t1.exon4;Parent=MS.gene053466.t1 |
| chr1.4 | CDS | 29549816 | 29550283 | 29549816 | ID=cds.MS.gene053466.t1;Parent=MS.gene053466.t1 |
| chr1.4 | exon | 29549223 | 29549456 | 29549223 | ID=MS.gene053466.t1.exon5;Parent=MS.gene053466.t1 |
| chr1.4 | CDS | 29549223 | 29549456 | 29549223 | ID=cds.MS.gene053466.t1;Parent=MS.gene053466.t1 |
| Gene Sequence |
| Protein sequence |
