AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057071

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057071.t1 MTR_5g091390 97.742 310 6 1 1 309 1 310 0.0 618
MS.gene057071.t1 MTR_4g094588 44.966 298 135 11 28 303 41 331 9.08e-58 189
MS.gene057071.t1 MTR_1g086790 45.685 197 85 4 125 301 125 319 5.62e-46 158
MS.gene057071.t1 MTR_5g043880 46.429 196 86 5 123 308 89 275 1.52e-45 155
MS.gene057071.t1 MTR_7g109800 46.277 188 88 5 121 301 108 289 2.28e-41 145
MS.gene057071.t1 MTR_2g033820 77.381 84 19 0 141 224 187 270 5.59e-41 146
MS.gene057071.t1 MTR_4g122530 55.556 108 39 2 141 248 192 290 1.19e-34 130
MS.gene057071.t1 MTR_7g079010 53.719 121 52 1 95 215 83 199 4.25e-34 124
MS.gene057071.t1 MTR_8g007270 53.509 114 48 1 100 213 102 210 9.54e-34 123
MS.gene057071.t1 MTR_7g011820 43.353 173 84 4 64 233 323 484 4.02e-33 127
MS.gene057071.t1 MTR_7g011820 44.762 105 42 2 127 216 183 286 1.46e-18 86.3
MS.gene057071.t1 MTR_3g095080 66.216 74 25 0 140 213 151 224 4.00e-31 117
MS.gene057071.t1 MTR_3g095080 66.216 74 25 0 140 213 127 200 4.19e-31 116
MS.gene057071.t1 MTR_5g042920 48.760 121 52 2 131 241 294 414 4.32e-31 121
MS.gene057071.t1 MTR_5g042920 41.071 112 50 3 157 261 151 253 6.45e-17 81.3
MS.gene057071.t1 MTR_5g094430 51.402 107 49 1 138 244 211 314 6.12e-31 120
MS.gene057071.t1 MTR_5g094430 57.627 59 24 1 158 216 67 124 6.39e-14 72.0
MS.gene057071.t1 MTR_5g094430 51.402 107 49 1 138 244 233 336 8.24e-31 120
MS.gene057071.t1 MTR_5g094430 57.627 59 24 1 158 216 89 146 5.39e-14 72.4
MS.gene057071.t1 MTR_5g094430 51.402 107 49 1 138 244 345 448 2.97e-30 120
MS.gene057071.t1 MTR_5g094430 57.627 59 24 1 158 216 201 258 6.50e-14 72.4
MS.gene057071.t1 MTR_3g104750 60.241 83 31 1 131 213 80 160 5.37e-30 112
MS.gene057071.t1 MTR_3g095040 44.538 119 60 1 117 229 72 190 6.51e-30 113
MS.gene057071.t1 MTR_8g092140 65.333 75 25 1 140 213 142 216 1.17e-29 113
MS.gene057071.t1 MTR_7g080020 41.611 149 78 3 115 254 446 594 2.16e-29 118
MS.gene057071.t1 MTR_7g080020 58.571 70 27 2 157 225 280 348 2.33e-17 82.8
MS.gene057071.t1 MTR_3g056100 57.303 89 37 1 138 226 239 326 2.19e-29 116
MS.gene057071.t1 MTR_3g056100 47.945 73 37 1 157 229 99 170 1.24e-13 71.2
MS.gene057071.t1 MTR_3g056100 57.303 89 37 1 138 226 252 339 2.47e-29 116
MS.gene057071.t1 MTR_3g056100 38.679 106 64 1 124 229 66 170 1.11e-13 71.6
MS.gene057071.t1 MTR_4g082580 60.000 80 32 0 138 217 259 338 3.60e-29 115
MS.gene057071.t1 MTR_4g082580 42.500 80 42 1 137 216 129 204 2.73e-15 76.3
MS.gene057071.t1 MTR_3g056100 57.303 89 37 1 138 226 383 470 3.78e-29 117
MS.gene057071.t1 MTR_3g056100 38.679 106 64 1 124 229 210 314 9.23e-14 72.0
MS.gene057071.t1 MTR_3g056100 57.303 89 37 1 138 226 396 483 3.79e-29 117
MS.gene057071.t1 MTR_3g056100 38.679 106 64 1 124 229 210 314 7.99e-14 72.4
MS.gene057071.t1 MTR_3g009470 50.485 103 46 1 121 218 454 556 4.89e-29 117
MS.gene057071.t1 MTR_3g009470 59.375 64 25 1 157 220 280 342 3.19e-17 82.4
MS.gene057071.t1 MTR_1g015140 66.234 77 25 1 137 213 83 158 1.47e-28 108
MS.gene057071.t1 MTR_4g013260 62.025 79 30 0 138 216 317 395 1.84e-28 114
MS.gene057071.t1 MTR_4g013260 46.392 97 51 1 157 253 184 279 1.63e-18 85.9
MS.gene057071.t1 MTR_5g074400 53.922 102 43 2 126 224 386 486 2.00e-28 115
MS.gene057071.t1 MTR_5g074400 55.000 60 26 1 157 216 243 301 6.38e-14 72.4
MS.gene057071.t1 MTR_7g071120 52.830 106 46 2 122 227 292 393 2.44e-28 114
MS.gene057071.t1 MTR_7g071120 56.250 64 27 1 157 220 166 228 2.79e-15 76.3
MS.gene057071.t1 MTR_3g031220 52.381 105 44 2 119 217 321 425 3.89e-28 114
MS.gene057071.t1 MTR_3g031220 51.471 68 32 1 157 224 198 264 1.82e-14 73.9
MS.gene057071.t1 MTR_7g028415 65.217 69 24 0 145 213 81 149 1.06e-27 106
MS.gene057071.t1 MTR_7g028710 65.217 69 24 0 145 213 81 149 1.06e-27 106
MS.gene057071.t1 MTR_1g077780 48.936 94 45 1 141 234 46 136 1.32e-27 105
MS.gene057071.t1 MTR_7g080000 40.385 156 69 3 81 218 344 493 1.60e-27 112
MS.gene057071.t1 MTR_7g080000 54.930 71 30 2 156 225 233 302 2.21e-16 80.1
MS.gene057071.t1 MTR_7g100510 45.455 121 52 2 119 225 309 429 2.15e-26 108
MS.gene057071.t1 MTR_7g100510 55.405 74 30 2 158 229 190 262 7.56e-17 80.9
MS.gene057071.t1 MTR_3g053330 31.780 236 118 6 82 288 171 392 3.57e-26 107
MS.gene057071.t1 MTR_8g092010 54.762 84 38 0 135 218 86 169 5.95e-26 102
MS.gene057071.t1 MTR_8g096730 50.000 86 43 0 128 213 41 126 1.98e-25 99.4
MS.gene057071.t1 MTR_2g045360 34.132 167 105 3 90 255 146 308 9.64e-24 100
MS.gene057071.t1 MTR_5g097490 51.648 91 43 1 142 232 237 326 3.44e-22 95.9
MS.gene057071.t1 MTR_7g062220 66.667 57 19 0 157 213 124 180 1.15e-21 93.6
MS.gene057071.t1 MTR_6g086555 48.148 81 41 1 143 222 192 272 5.84e-21 92.8
MS.gene057071.t1 MTR_1g009613 40.187 107 62 2 123 227 227 333 7.89e-21 91.7
MS.gene057071.t1 MTR_2g023930 35.374 147 79 4 85 216 220 365 1.38e-20 92.4
MS.gene057071.t1 MTR_2g105060 50.000 82 38 2 139 217 74 155 2.09e-20 88.6
MS.gene057071.t1 MTR_2g105060 50.000 82 38 2 139 217 149 230 3.50e-20 89.4
MS.gene057071.t1 MTR_4g132430 46.914 81 42 1 137 216 107 187 3.73e-20 89.7
MS.gene057071.t1 MTR_2g088000 40.385 104 55 2 133 229 325 428 3.79e-20 91.3
MS.gene057071.t1 MTR_4g132430 46.914 81 42 1 137 216 241 321 7.18e-20 90.1
MS.gene057071.t1 MTR_4g130900 47.500 80 42 0 138 217 340 419 7.64e-20 90.1
MS.gene057071.t1 MTR_7g110720 49.351 77 38 1 141 216 200 276 9.52e-20 89.4
MS.gene057071.t1 MTR_1g013760 40.594 101 50 4 119 213 101 197 9.86e-20 87.4
MS.gene057071.t1 MTR_7g110720 49.351 77 38 1 141 216 173 249 1.06e-19 89.0
MS.gene057071.t1 MTR_4g049790 43.269 104 52 2 137 233 292 395 1.29e-19 89.4
MS.gene057071.t1 MTR_4g049760 44.330 97 47 2 144 233 277 373 2.84e-19 88.6
MS.gene057071.t1 MTR_4g107970 47.436 78 40 1 140 216 161 238 3.18e-19 88.2
MS.gene057071.t1 MTR_4g107970 47.436 78 40 1 140 216 238 315 3.20e-19 88.2
MS.gene057071.t1 MTR_5g016610 43.434 99 52 2 134 231 176 271 3.90e-19 85.5
MS.gene057071.t1 MTR_4g094908 34.615 182 108 5 54 231 164 338 4.28e-19 86.7
MS.gene057071.t1 MTR_2g016770 55.000 60 26 1 158 216 36 95 7.15e-19 84.0
MS.gene057071.t1 MTR_4g094412 47.436 78 40 1 141 217 218 295 7.94e-19 87.0
MS.gene057071.t1 MTR_4g094412 47.436 78 40 1 141 217 227 304 8.87e-19 86.7
MS.gene057071.t1 MTR_3g108960 41.837 98 56 1 118 214 275 372 9.13e-19 86.3
MS.gene057071.t1 MTR_2g016770 55.000 60 26 1 158 216 28 87 9.33e-19 83.2
MS.gene057071.t1 MTR_8g098945 55.556 63 27 1 156 217 128 190 9.40e-19 84.7
MS.gene057071.t1 MTR_7g009730 44.681 94 47 2 141 233 203 292 1.36e-18 86.7
MS.gene057071.t1 MTR_8g087000 47.500 80 41 1 140 218 59 138 2.39e-18 82.8
MS.gene057071.t1 MTR_8g087000 47.500 80 41 1 140 218 60 139 2.43e-18 82.8
MS.gene057071.t1 MTR_2g083870 42.718 103 53 3 119 216 39 140 3.97e-18 82.8
MS.gene057071.t1 MTR_3g106060 51.667 60 28 1 155 213 136 195 4.61e-18 83.2
MS.gene057071.t1 MTR_8g028565 56.667 60 25 1 158 216 156 215 7.53e-18 83.2
MS.gene057071.t1 MTR_5g029850 63.793 58 10 1 128 174 11 68 1.03e-17 76.6
MS.gene057071.t1 MTR_7g079040 54.098 61 27 1 158 217 155 215 1.84e-17 81.6
MS.gene057071.t1 MTR_7g109600 41.414 99 51 2 128 219 18 116 2.42e-17 80.5
MS.gene057071.t1 MTR_2g032030 55.738 61 26 1 158 217 268 328 2.96e-17 82.4
MS.gene057071.t1 MTR_3g009470 59.375 64 25 1 157 220 280 342 3.07e-17 82.4
MS.gene057071.t1 MTR_3g009470 46.774 62 28 1 121 177 454 515 4.62e-11 63.9
MS.gene057071.t1 MTR_1g070455 52.239 67 31 1 158 223 294 360 3.48e-17 81.3
MS.gene057071.t1 MTR_2g032030 56.667 60 25 1 158 216 268 327 4.31e-17 81.6
MS.gene057071.t1 MTR_4g127040 44.578 83 44 2 133 213 220 302 4.67e-17 80.5
MS.gene057071.t1 MTR_4g007060 44.318 88 45 2 156 239 127 214 4.69e-17 80.1
MS.gene057071.t1 MTR_4g007060 44.318 88 45 2 156 239 161 248 5.56e-17 80.5
MS.gene057071.t1 MTR_1g099600 40.187 107 61 3 136 240 163 268 2.08e-16 78.6
MS.gene057071.t1 MTR_1g078260 46.479 71 37 1 144 213 234 304 2.14e-16 79.7
MS.gene057071.t1 MTR_2g075610 37.241 145 79 5 156 294 28 166 1.03e-15 74.3
MS.gene057071.t1 MTR_1g013790 46.774 62 32 1 156 216 100 161 2.38e-15 74.7
MS.gene057071.t1 MTR_0117s0040 46.479 71 37 1 144 213 61 131 2.43e-15 74.7
MS.gene057071.t1 MTR_3g090860 37.931 116 50 6 115 215 84 192 3.29e-15 75.5
MS.gene057071.t1 MTR_8g099350 43.956 91 42 3 129 211 100 189 6.61e-15 74.7
MS.gene057071.t1 MTR_3g031220 51.471 68 32 1 157 224 198 264 9.12e-15 74.3
MS.gene057071.t1 MTR_3g031220 49.231 65 27 2 119 177 321 385 6.62e-11 62.8
MS.gene057071.t1 MTR_5g097500 40.816 98 50 2 142 232 215 311 1.08e-14 73.6
MS.gene057071.t1 MTR_4g047580 37.500 104 58 2 137 233 261 364 1.12e-14 74.7
MS.gene057071.t1 MTR_5g067680 54.098 61 25 1 157 214 202 262 1.51e-14 73.6
MS.gene057071.t1 MTR_8g067635 50.000 66 32 1 157 221 349 414 1.81e-14 73.9
MS.gene057071.t1 MTR_8g067650 50.000 66 32 1 157 221 339 404 2.49e-14 73.6
MS.gene057071.t1 MTR_7g117200 38.835 103 53 3 156 254 117 213 3.04e-14 72.4
MS.gene057071.t1 MTR_2g075750 41.758 91 39 3 156 234 27 115 7.49e-14 68.9
MS.gene057071.t1 MTR_8g027860 33.065 124 74 3 96 211 71 193 1.06e-13 71.2
MS.gene057071.t1 MTR_2g024350 46.032 63 33 1 157 218 8 70 1.09e-13 69.7
MS.gene057071.t1 MTR_5g074200 47.143 70 35 2 157 225 220 288 1.25e-13 70.9
MS.gene057071.t1 MTR_2g024380 48.387 62 31 1 157 217 251 312 1.66e-13 71.2
MS.gene057071.t1 MTR_8g032510 51.724 58 25 1 157 211 119 176 1.73e-13 70.1
MS.gene057071.t1 MTR_2g075700 35.484 124 54 3 156 253 143 266 3.10e-13 69.3
MS.gene057071.t1 MTR_8g069935 44.286 70 38 1 157 225 331 400 3.32e-13 70.1
MS.gene057071.t1 MTR_7g073430 50.000 58 26 1 157 211 122 179 2.15e-12 66.6
MS.gene057071.t1 MTR_2g075680 50.847 59 26 1 156 211 147 205 2.54e-12 66.6
MS.gene057071.t1 MTR_3g095080 62.500 40 15 0 140 179 151 190 4.60e-12 64.3
MS.gene057071.t1 MTR_7g073380 40.449 89 40 3 156 237 122 204 6.56e-12 65.5
MS.gene057071.t1 MTR_6g053200 35.043 117 67 4 115 227 289 400 8.83e-12 65.9
MS.gene057071.t1 MTR_5g067700 26.452 155 103 4 121 270 74 222 1.51e-11 63.5
MS.gene057071.t1 MTR_3g093830 33.613 119 59 5 127 232 102 213 2.20e-11 63.9
MS.gene057071.t1 MTR_8g005750 48.276 58 27 1 157 211 103 160 3.08e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057071.t1 AT4G18170 45.151 299 135 12 22 309 38 318 9.61e-57 186
MS.gene057071.t1 AT1G29860 45.936 283 119 9 33 303 17 277 7.57e-54 177
MS.gene057071.t1 AT5G46350 51.579 190 75 5 34 220 71 246 4.03e-46 159
MS.gene057071.t1 AT1G69310 42.056 214 103 5 90 303 92 284 1.39e-44 154
MS.gene057071.t1 AT1G69310 42.056 214 103 5 90 303 92 284 1.39e-44 154
MS.gene057071.t1 AT1G69310 42.056 214 103 5 90 303 92 284 1.39e-44 154
MS.gene057071.t1 AT2G47260 62.931 116 39 2 127 241 143 255 8.89e-43 150
MS.gene057071.t1 AT5G49520 47.802 182 70 4 141 301 205 382 2.31e-41 148
MS.gene057071.t1 AT1G69310 40.187 214 103 6 90 303 92 280 4.67e-39 139
MS.gene057071.t1 AT5G07100 49.275 138 61 2 90 227 83 211 8.41e-37 131
MS.gene057071.t1 AT5G07100 43.836 73 41 0 157 229 24 96 6.19e-15 72.8
MS.gene057071.t1 AT5G07100 49.275 138 61 2 90 227 83 211 8.41e-37 131
MS.gene057071.t1 AT5G07100 43.836 73 41 0 157 229 24 96 6.19e-15 72.8
MS.gene057071.t1 AT5G07100 49.275 138 61 2 90 227 83 211 8.41e-37 131
MS.gene057071.t1 AT5G07100 43.836 73 41 0 157 229 24 96 6.19e-15 72.8
MS.gene057071.t1 AT5G07100 49.275 138 61 2 90 227 83 211 8.41e-37 131
MS.gene057071.t1 AT5G07100 43.836 73 41 0 157 229 24 96 6.19e-15 72.8
MS.gene057071.t1 AT5G07100 49.275 138 61 2 90 227 176 304 1.48e-36 133
MS.gene057071.t1 AT5G07100 43.836 73 41 0 157 229 117 189 8.84e-15 73.9
MS.gene057071.t1 AT3G62340 62.353 85 32 0 135 219 96 180 1.41e-33 124
MS.gene057071.t1 AT4G39410 67.073 82 27 0 132 213 198 279 2.12e-33 125
MS.gene057071.t1 AT2G46130 67.500 80 26 0 136 215 9 88 3.95e-33 118
MS.gene057071.t1 AT2G44745 64.286 84 29 1 130 213 119 201 5.48e-33 121
MS.gene057071.t1 AT2G03340 40.719 167 85 3 57 217 317 475 5.33e-32 124
MS.gene057071.t1 AT2G03340 59.091 66 25 2 157 222 250 313 2.40e-17 82.8
MS.gene057071.t1 AT1G13960 62.025 79 30 0 138 216 237 315 3.33e-30 117
MS.gene057071.t1 AT1G13960 59.701 67 25 2 157 222 76 141 9.09e-18 83.2
MS.gene057071.t1 AT4G26640 43.571 140 65 3 84 218 136 266 4.74e-30 117
MS.gene057071.t1 AT4G26640 52.857 70 32 1 157 226 35 103 4.81e-15 75.5
MS.gene057071.t1 AT4G26640 43.571 140 65 3 84 218 136 266 4.74e-30 117
MS.gene057071.t1 AT4G26640 52.857 70 32 1 157 226 35 103 4.81e-15 75.5
MS.gene057071.t1 AT4G26640 43.571 140 65 3 84 218 136 266 4.74e-30 117
MS.gene057071.t1 AT4G26640 52.857 70 32 1 157 226 35 103 4.81e-15 75.5
MS.gene057071.t1 AT4G26640 43.571 140 65 3 84 218 136 266 4.74e-30 117
MS.gene057071.t1 AT4G26640 52.857 70 32 1 157 226 35 103 4.81e-15 75.5
MS.gene057071.t1 AT1G13960 62.025 79 30 0 138 216 390 468 5.73e-30 119
MS.gene057071.t1 AT1G13960 59.701 67 25 2 157 222 229 294 6.15e-18 84.3
MS.gene057071.t1 AT5G41570 53.763 93 43 0 123 215 64 156 7.37e-30 112
MS.gene057071.t1 AT4G26640 43.571 140 65 3 84 218 240 370 1.11e-29 118
MS.gene057071.t1 AT4G26640 52.857 70 32 1 157 226 139 207 5.28e-15 75.5
MS.gene057071.t1 AT4G26640 43.571 140 65 3 84 218 272 402 1.19e-29 118
MS.gene057071.t1 AT4G26640 52.857 70 32 1 157 226 171 239 5.12e-15 75.9
MS.gene057071.t1 AT1G64000 60.000 85 33 1 131 215 89 172 1.48e-29 112
MS.gene057071.t1 AT4G26640 43.571 140 65 3 84 218 312 442 1.69e-29 118
MS.gene057071.t1 AT4G26640 52.857 70 32 1 157 226 211 279 5.13e-15 75.9
MS.gene057071.t1 AT5G26170 64.286 70 25 0 144 213 100 169 4.75e-29 109
MS.gene057071.t1 AT3G01080 52.747 91 43 0 126 216 313 403 1.19e-28 114
MS.gene057071.t1 AT3G01080 54.412 68 30 1 157 224 205 271 5.91e-17 81.3
MS.gene057071.t1 AT3G01970 62.857 70 26 0 144 213 52 121 1.31e-28 107
MS.gene057071.t1 AT3G01080 52.747 91 43 0 126 216 275 365 1.96e-28 114
MS.gene057071.t1 AT3G01080 54.412 68 30 1 157 224 167 233 7.41e-17 80.9
MS.gene057071.t1 AT2G38470 59.302 86 34 1 138 223 343 427 2.30e-28 114
MS.gene057071.t1 AT2G38470 58.333 60 24 1 157 216 184 242 1.89e-14 73.9
MS.gene057071.t1 AT2G30250 62.651 83 31 0 138 220 309 391 2.82e-28 112
MS.gene057071.t1 AT2G30250 39.423 104 57 2 127 230 141 238 6.72e-13 68.9
MS.gene057071.t1 AT2G46130 62.500 80 26 1 136 215 9 84 8.93e-28 104
MS.gene057071.t1 AT5G56270 56.790 81 35 0 138 218 468 548 1.25e-27 113
MS.gene057071.t1 AT5G56270 61.667 60 22 1 157 216 273 331 1.33e-16 80.9
MS.gene057071.t1 AT5G13080 64.286 70 25 0 144 213 54 123 4.18e-27 103
MS.gene057071.t1 AT5G64810 49.533 107 48 3 127 229 76 180 7.63e-27 104
MS.gene057071.t1 AT4G26440 45.600 125 56 2 123 237 328 450 2.03e-25 106
MS.gene057071.t1 AT4G26440 56.667 60 25 1 157 216 178 236 1.14e-14 74.7
MS.gene057071.t1 AT2G04880 51.648 91 44 0 137 227 263 353 5.33e-25 104
MS.gene057071.t1 AT2G04880 53.030 66 28 2 156 221 110 172 1.10e-13 71.6
MS.gene057071.t1 AT2G04880 51.648 91 44 0 137 227 287 377 6.87e-25 104
MS.gene057071.t1 AT2G04880 46.154 91 44 4 156 246 110 195 1.68e-14 74.3
MS.gene057071.t1 AT2G37260 47.154 123 55 5 119 238 233 348 3.75e-24 100
MS.gene057071.t1 AT2G37260 48.315 89 40 3 158 241 86 173 7.27e-16 77.4
MS.gene057071.t1 AT2G37260 47.154 123 55 5 119 238 231 346 3.80e-24 100
MS.gene057071.t1 AT2G37260 48.315 89 40 3 158 241 84 171 7.16e-16 77.4
MS.gene057071.t1 AT2G37260 47.899 119 52 5 119 234 313 424 6.82e-24 101
MS.gene057071.t1 AT2G37260 54.286 70 28 2 158 224 166 234 9.48e-16 77.8
MS.gene057071.t1 AT2G21900 41.905 105 57 2 130 230 78 182 1.37e-23 96.3
MS.gene057071.t1 AT4G04450 42.373 118 61 2 121 231 162 279 1.89e-23 100
MS.gene057071.t1 AT4G04450 42.373 118 61 2 121 231 256 373 5.90e-23 99.4
MS.gene057071.t1 AT4G30935 44.118 102 51 2 141 240 315 412 1.81e-21 94.7
MS.gene057071.t1 AT4G31800 48.750 80 40 1 156 234 110 189 2.83e-21 90.9
MS.gene057071.t1 AT4G31800 48.750 80 40 1 156 234 175 254 4.71e-21 91.7
MS.gene057071.t1 AT1G62300 35.570 149 85 3 79 216 224 372 1.25e-20 92.4
MS.gene057071.t1 AT1G68150 43.689 103 55 2 141 242 219 319 1.42e-20 91.3
MS.gene057071.t1 AT2G25000 56.452 62 26 1 156 216 102 163 1.51e-20 88.6
MS.gene057071.t1 AT2G25000 56.452 62 26 1 156 216 102 163 1.51e-20 88.6
MS.gene057071.t1 AT2G30590 41.228 114 63 3 104 213 257 370 1.57e-20 91.3
MS.gene057071.t1 AT1G55600 53.425 73 34 0 144 216 294 366 1.63e-20 92.0
MS.gene057071.t1 AT4G22070 48.148 81 41 1 137 216 277 357 2.25e-20 91.7
MS.gene057071.t1 AT4G22070 48.148 81 41 1 137 216 277 357 2.25e-20 91.7
MS.gene057071.t1 AT4G22070 48.148 81 41 1 137 216 277 357 2.25e-20 91.7
MS.gene057071.t1 AT4G22070 48.148 81 41 1 137 216 277 357 2.25e-20 91.7
MS.gene057071.t1 AT2G25000 56.452 62 26 1 156 216 124 185 2.66e-20 88.6
MS.gene057071.t1 AT2G25000 56.452 62 26 1 156 216 145 206 3.92e-20 88.6
MS.gene057071.t1 AT4G01250 40.217 92 52 2 126 216 99 188 2.49e-19 86.7
MS.gene057071.t1 AT1G18860 48.718 78 39 1 140 216 222 299 2.93e-19 88.6
MS.gene057071.t1 AT1G29280 56.452 62 26 1 158 218 75 136 5.41e-19 85.1
MS.gene057071.t1 AT5G15130 36.641 131 74 2 96 225 132 254 7.49e-19 87.0
MS.gene057071.t1 AT1G80840 41.667 96 51 2 132 222 117 212 7.58e-19 85.5
MS.gene057071.t1 AT5G15130 36.641 131 74 2 96 225 174 296 8.26e-19 87.0
MS.gene057071.t1 AT3G58710 42.857 105 55 2 119 218 29 133 1.32e-18 84.3
MS.gene057071.t1 AT4G01720 34.615 130 81 2 88 216 173 299 2.28e-18 85.5
MS.gene057071.t1 AT4G23550 54.545 66 29 1 152 216 135 200 3.33e-18 83.6
MS.gene057071.t1 AT3G58710 43.810 105 53 3 119 218 29 132 1.11e-17 81.6
MS.gene057071.t1 AT5G52830 57.377 61 25 1 158 217 166 226 1.13e-17 82.8
MS.gene057071.t1 AT3G01080 54.412 68 30 1 157 224 205 271 1.87e-17 81.6
MS.gene057071.t1 AT5G45050 43.564 101 54 3 126 225 1011 1109 2.19e-17 83.2
MS.gene057071.t1 AT5G45050 44.000 100 53 3 126 224 1150 1247 2.20e-17 83.2
MS.gene057071.t1 AT5G45050 45.745 94 48 3 132 224 1128 1219 2.21e-17 83.2
MS.gene057071.t1 AT4G31550 41.975 81 46 1 134 213 222 302 2.34e-17 81.6
MS.gene057071.t1 AT5G43290 58.621 58 24 0 157 214 114 171 2.49e-17 80.9
MS.gene057071.t1 AT2G34830 56.667 60 25 1 158 216 216 275 3.61e-17 82.0
MS.gene057071.t1 AT2G34830 56.667 60 25 1 158 216 225 284 3.88e-17 81.6
MS.gene057071.t1 AT2G23320 45.679 81 43 1 134 213 217 297 4.61e-17 80.5
MS.gene057071.t1 AT4G31550 40.964 83 48 1 132 213 221 303 5.05e-17 80.5
MS.gene057071.t1 AT5G28650 41.573 89 51 1 126 213 231 319 9.93e-17 79.7
MS.gene057071.t1 AT1G30650 55.000 60 26 1 158 216 218 277 1.59e-16 80.1
MS.gene057071.t1 AT4G24240 43.373 83 45 2 133 213 256 338 2.45e-16 79.0
MS.gene057071.t1 AT2G24570 40.476 84 49 1 132 214 218 301 2.67e-16 78.6
MS.gene057071.t1 AT3G04670 40.449 89 52 1 126 213 231 319 5.16e-16 77.8
MS.gene057071.t1 AT1G69810 45.570 79 41 2 140 216 128 206 4.87e-15 75.1
MS.gene057071.t1 AT1G69810 45.570 79 41 2 140 216 186 264 5.14e-15 75.5
MS.gene057071.t1 AT2G46400 40.816 98 52 3 121 215 69 163 2.18e-14 72.8
MS.gene057071.t1 AT2G40750 32.877 146 83 5 106 239 99 241 6.16e-14 72.0
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.12e-13 72.4
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 7.70e-12 66.6
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.14e-13 72.4
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 8.37e-12 66.6
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.15e-13 72.0
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 8.59e-12 66.6
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.15e-13 72.0
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 7.64e-12 66.6
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.15e-13 72.0
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 7.64e-12 66.6
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.17e-13 72.0
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 7.77e-12 66.6
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.18e-13 72.0
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 8.39e-12 66.6
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.18e-13 72.0
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 8.39e-12 66.6
MS.gene057071.t1 AT1G66560 51.724 58 25 1 157 211 103 160 1.19e-13 70.1
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.20e-13 72.0
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 8.63e-12 66.2
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 544 661 1.23e-13 72.0
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 467 541 8.62e-12 66.6
MS.gene057071.t1 AT4G12020 38.400 125 67 3 56 177 477 594 1.27e-13 72.0
MS.gene057071.t1 AT4G12020 43.421 76 42 1 156 231 400 474 8.79e-12 66.6
MS.gene057071.t1 AT3G56400 38.400 125 67 5 95 215 61 179 4.12e-13 68.9
MS.gene057071.t1 AT1G80590 43.662 71 37 1 158 225 86 156 1.10e-12 67.0
MS.gene057071.t1 AT1G66600 50.847 59 26 1 156 211 102 160 1.52e-12 66.6
MS.gene057071.t1 AT4G11070 50.000 58 26 1 157 211 109 166 4.96e-12 65.5
MS.gene057071.t1 AT4G11070 50.000 58 26 1 157 211 141 198 5.35e-12 65.9
MS.gene057071.t1 AT1G66550 49.123 57 26 1 158 211 104 160 1.52e-11 63.9
MS.gene057071.t1 AT2G40740 42.500 80 40 2 157 230 173 252 1.52e-11 64.3
MS.gene057071.t1 AT5G01900 50.877 57 25 1 158 211 111 167 1.60e-11 63.9
MS.gene057071.t1 AT1G66550 49.123 57 26 1 158 211 109 165 1.75e-11 63.5
MS.gene057071.t1 AT2G40740 42.500 80 40 2 157 230 182 261 2.01e-11 63.9
MS.gene057071.t1 AT5G45260 38.532 109 60 4 123 225 1172 1279 4.82e-11 64.3
MS.gene057071.t1 AT5G24110 45.763 59 29 1 156 211 112 170 6.70e-11 62.4

Find 52 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGATAAGCAGCCAAAATT+AGG 0.162626 5.3:-73412525 MS.gene057071:CDS
CCATCTTCACACCCTAATTT+TGG 0.163856 5.3:+73412513 None:intergenic
GAGGATGATTCTGAAGATTT+TGG 0.268686 5.3:+73412588 None:intergenic
GATGAGGTTGTGGAAGATTT+TGG 0.287257 5.3:+73410642 None:intergenic
TATGTTGTCATCACAATTGA+TGG 0.321462 5.3:+73410845 None:intergenic
GGATATAGATGGAGAAAATA+TGG 0.326911 5.3:-73411910 MS.gene057071:CDS
CCATTGAAGTGGAAGCAAAT+AGG 0.331270 5.3:+73410744 None:intergenic
CCTATTTGCTTCCACTTCAA+TGG 0.351388 5.3:-73410744 MS.gene057071:CDS
TTCCAACTTCGTCGTGACTA+TGG 0.365043 5.3:-73410587 MS.gene057071:CDS
CTTTGTGTTGTTGTCATCAA+TGG 0.382924 5.3:+73412659 None:intergenic
TGCTTCCACTTCAATGGGAT+TGG 0.385569 5.3:-73410738 MS.gene057071:CDS
CATTGAAGTGGAAGCAAATA+GGG 0.387044 5.3:+73410745 None:intergenic
TTACTACCATCATCATTTCC+TGG 0.387601 5.3:-73410551 MS.gene057071:CDS
TCATCACAATTGATGGATCT+TGG 0.397918 5.3:+73410852 None:intergenic
CTATTTGCTTCCACTTCAAT+GGG 0.415381 5.3:-73410743 MS.gene057071:CDS
GCATTACCCCTAAGTGTTGC+TGG 0.415723 5.3:+73410797 None:intergenic
AAGATAAGCAGCCAAAATTA+GGG 0.416196 5.3:-73412524 MS.gene057071:CDS
GGAGACTTATCATCACTAGT+AGG 0.425549 5.3:-73412624 MS.gene057071:CDS
GAAACTGAGAAAAGAAATCT+TGG 0.441450 5.3:+73410702 None:intergenic
TGATAGGGTGTTATAGTCCA+TGG 0.453460 5.3:+73412725 None:intergenic
AGAAGTGCATTGTGAAGAAA+AGG 0.456809 5.3:-73410889 MS.gene057071:CDS
TCACTGTCCAGCAACACTTA+GGG 0.468430 5.3:-73410804 MS.gene057071:CDS
TGCTGTTGCTGATGAGGTTG+TGG 0.472117 5.3:+73410632 None:intergenic
GGATCACTTTGGCTATAAGT+TGG 0.478377 5.3:+73410677 None:intergenic
AGTTTCAGTGACTACTTACA+AGG 0.488173 5.3:-73412750 MS.gene057071:CDS
ATCACTGTCCAGCAACACTT+AGG 0.489854 5.3:-73410805 MS.gene057071:CDS
GAGATTGATCATCTTGAAGA+TGG 0.494596 5.3:-73411931 MS.gene057071:CDS
AAATAATTTAACCTTGGGTA+CGG 0.496177 5.3:+73411865 None:intergenic
CCAAAATTAGGGTGTGAAGA+TGG 0.502839 5.3:-73412513 MS.gene057071:CDS
ATCTTGAAGATGGATATAGA+TGG 0.508856 5.3:-73411921 MS.gene057071:CDS
AAACTTGTACTATGAGAAGA+AGG 0.518284 5.3:+73412768 None:intergenic
AACCATAGTCACGACGAAGT+TGG 0.520777 5.3:+73410585 None:intergenic
TTGCTCCAATCCCATTGAAG+TGG 0.528723 5.3:+73410733 None:intergenic
GGAAAATTTGTGGATCACTT+TGG 0.533405 5.3:+73410666 None:intergenic
TGTTGTTGCTGTTGCTGATG+AGG 0.533557 5.3:+73410626 None:intergenic
TTGAGTTCATCGTGATAGAA+AGG 0.543194 5.3:+73412834 None:intergenic
TGACTACTTACAAGGTTCCA+TGG 0.550307 5.3:-73412742 MS.gene057071:CDS
ATTGTGATGACAACATATGA+AGG 0.558492 5.3:-73410839 MS.gene057071:CDS
TATGACAGCTTCATTAGATG+AGG 0.578389 5.3:+73412569 None:intergenic
ATCATGATTCTCATTAGCCA+TGG 0.579134 5.3:+73412857 None:intergenic
GAGACTTATCATCACTAGTA+GGG 0.580015 5.3:-73412623 MS.gene057071:CDS
AACACAAAGAAATCTAGTGC+AGG 0.593942 5.3:-73412645 MS.gene057071:CDS
CACTGTCCAGCAACACTTAG+GGG 0.611634 5.3:-73410803 MS.gene057071:CDS
TGAAGAACAAGACAAGTCAA+AGG 0.626003 5.3:+73412698 None:intergenic
TCAAGAATAGTCCGTACCCA+AGG 0.626808 5.3:-73411876 MS.gene057071:intron
TAAGTGTTGCTGGACAGTGA+TGG 0.643871 5.3:+73410807 None:intergenic
GAAGTGCATTGTGAAGAAAA+GGG 0.651750 5.3:-73410888 MS.gene057071:CDS
GAAGTGGAAGCAAATAGGGA+TGG 0.655945 5.3:+73410749 None:intergenic
GTGCATTGTGAAGAAAAGGG+TGG 0.664530 5.3:-73410885 MS.gene057071:CDS
TGGTGATGATGACAACAACA+TGG 0.706923 5.3:+73410769 None:intergenic
TTAGTCAAGAATGCAAACCG+TGG 0.731382 5.3:+73411958 None:intergenic
TGATGATGACAACAACATGG+AGG 0.818574 5.3:+73410772 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTACTTAAATTCTAAT+TGG - chr5.3:73412097-73412116 MS.gene057071:intron 10.0%
!! AAATTACTAAATTTGAAAAT+TGG + chr5.3:73411551-73411570 None:intergenic 10.0%
!!! AGAATTTAAGTAATTTTTTT+AGG + chr5.3:73412094-73412113 None:intergenic 10.0%
!!! GAATTTAAGTAATTTTTTTA+GGG + chr5.3:73412093-73412112 None:intergenic 10.0%
!!! TAATTTTTTGTCAAAATTAA+GGG - chr5.3:73411565-73411584 MS.gene057071:intron 10.0%
!! AAATTATAAGTACGAAATTT+AGG - chr5.3:73412035-73412054 MS.gene057071:intron 15.0%
!! ATAATTTATTGTGATGTTAT+AGG - chr5.3:73412165-73412184 MS.gene057071:intron 15.0%
!! CATCACAATAAATTATAAAT+TGG + chr5.3:73412161-73412180 None:intergenic 15.0%
!! TGAAAATTTAATTCAAATTG+TGG - chr5.3:73412240-73412259 MS.gene057071:intron 15.0%
!!! AATTTCGTACTTATAATTTT+AGG + chr5.3:73412034-73412053 None:intergenic 15.0%
!!! CTTTAAAATAAAATGATGAA+GGG - chr5.3:73411602-73411621 MS.gene057071:intron 15.0%
!!! GTAATTTTTTGTCAAAATTA+AGG - chr5.3:73411564-73411583 MS.gene057071:intron 15.0%
!!! TTTTCATTGAATTACTATAA+TGG - chr5.3:73411113-73411132 MS.gene057071:intron 15.0%
!! AATTGGAAATAATTTAACCT+TGG + chr5.3:73411534-73411553 None:intergenic 20.0%
!! ATAAGAAATGTATGTACATT+AGG + chr5.3:73411294-73411313 None:intergenic 20.0%
!! ATTACTTAAATTCTAATTGG+AGG - chr5.3:73412100-73412119 MS.gene057071:intron 20.0%
!! ATTGGAAATAATTTAACCTT+GGG + chr5.3:73411533-73411552 None:intergenic 20.0%
!! CAAAAAATCATGAAGAAAAA+GGG + chr5.3:73410963-73410982 None:intergenic 20.0%
!! GTTCTAACAAAAAAACAATT+GGG - chr5.3:73412057-73412076 MS.gene057071:intron 20.0%
!! TAAGAAATGTATGTACATTA+GGG + chr5.3:73411293-73411312 None:intergenic 20.0%
!! TCAAAAAATCATGAAGAAAA+AGG + chr5.3:73410964-73410983 None:intergenic 20.0%
!! TTCTAACAAAAAAACAATTG+GGG - chr5.3:73412058-73412077 MS.gene057071:intron 20.0%
!! TTGTGTATATATGACTAAAA+TGG - chr5.3:73411251-73411270 MS.gene057071:intron 20.0%
!!! AATTTTCAAAGTGATTTTGA+CGG + chr5.3:73412228-73412247 None:intergenic 20.0%
!!! ATAGTAATTTGTATCTACAA+AGG + chr5.3:73411773-73411792 None:intergenic 20.0%
!!! ATGATTTTTTGATAGATCAA+TGG - chr5.3:73410972-73410991 MS.gene057071:intron 20.0%
!!! ATTTTTTGTTGTTTACTTTG+TGG - chr5.3:73411078-73411097 MS.gene057071:intron 20.0%
!!! CCTTCATCATTTTATTTTAA+AGG + chr5.3:73411604-73411623 None:intergenic 20.0%
!!! CCTTTAAAATAAAATGATGA+AGG - chr5.3:73411601-73411620 MS.gene057071:intron 20.0%
!!! TAGTAATTTGTATCTACAAA+GGG + chr5.3:73411772-73411791 None:intergenic 20.0%
! AAATAATTTAACCTTGGGTA+CGG + chr5.3:73411528-73411547 None:intergenic 25.0%
! AAGTAAATGACTACTCTTAA+GGG - chr5.3:73411905-73411924 MS.gene057071:CDS 25.0%
! ACACTGAAAATGTCATAATT+AGG + chr5.3:73411160-73411179 None:intergenic 25.0%
! ATTGTTGTGAATTTGTCTAA+TGG - chr5.3:73411357-73411376 MS.gene057071:intron 25.0%
! TACATTTCTTATGATGAGTT+TGG - chr5.3:73411302-73411321 MS.gene057071:intron 25.0%
! TATGACATGAAATATGGAAT+AGG + chr5.3:73412408-73412427 None:intergenic 25.0%
! TATGTATATGTATACAATGC+AGG - chr5.3:73412456-73412475 MS.gene057071:intron 25.0%
! TGTATATATGACTAAAATGG+TGG - chr5.3:73411254-73411273 MS.gene057071:intron 25.0%
! TTACTTATTACCTTTCATCT+AGG - chr5.3:73411963-73411982 MS.gene057071:CDS 25.0%
! TTATGCTATGACATGAAATA+TGG + chr5.3:73412414-73412433 None:intergenic 25.0%
! TTCAAAATCTTAATTATGCG+AGG + chr5.3:73411737-73411756 None:intergenic 25.0%
!! GGTTCTAACAAAAAAACAAT+TGG - chr5.3:73412056-73412075 MS.gene057071:intron 25.0%
!! TCATTTTCACAAAACTTTCA+AGG - chr5.3:73410592-73410611 MS.gene057071:CDS 25.0%
!!! ATTTTTTGATAGATCAATGG+AGG - chr5.3:73410975-73410994 MS.gene057071:intron 25.0%
!!! TTTTTTGATAGATCAATGGA+GGG - chr5.3:73410976-73410995 MS.gene057071:intron 25.0%
AAAAACAATTGGGGTTCATT+AGG - chr5.3:73412067-73412086 MS.gene057071:intron 30.0%
AAACTTGTACTATGAGAAGA+AGG + chr5.3:73410625-73410644 None:intergenic 30.0%
AAAGATAAGCAGCCAAAATT+AGG - chr5.3:73410865-73410884 MS.gene057071:CDS 30.0%
AAGATAAGCAGCCAAAATTA+GGG - chr5.3:73410866-73410885 MS.gene057071:CDS 30.0%
AATAAAATGATGAAGGGTTG+TGG - chr5.3:73411608-73411627 MS.gene057071:intron 30.0%
ATCTTGAAGATGGATATAGA+TGG - chr5.3:73411469-73411488 MS.gene057071:intron 30.0%
ATTGTGATGACAACATATGA+AGG - chr5.3:73412551-73412570 MS.gene057071:CDS 30.0%
CAAGTAAATGACTACTCTTA+AGG - chr5.3:73411904-73411923 MS.gene057071:CDS 30.0%
CCTATCTACTCATGAATTAA+AGG + chr5.3:73411051-73411070 None:intergenic 30.0%
CCTTTAATTCATGAGTAGAT+AGG - chr5.3:73411048-73411067 MS.gene057071:intron 30.0%
CTTGTCTATATTAAGTACAG+TGG - chr5.3:73411205-73411224 MS.gene057071:intron 30.0%
GAAACTGAGAAAAGAAATCT+TGG + chr5.3:73412691-73412710 None:intergenic 30.0%
GAAATATGGAATAGGATTAG+AGG + chr5.3:73412400-73412419 None:intergenic 30.0%
GGATATAGATGGAGAAAATA+TGG - chr5.3:73411480-73411499 MS.gene057071:intron 30.0%
GGCTAAAAAGAAAGAGAAAA+AGG - chr5.3:73411401-73411420 MS.gene057071:intron 30.0%
TATGTTGTCATCACAATTGA+TGG + chr5.3:73412548-73412567 None:intergenic 30.0%
TGAAAAGTCTAAGAAAGAGT+AGG - chr5.3:73410906-73410925 MS.gene057071:CDS 30.0%
TGTGAATTTGTCTAATGGTT+TGG - chr5.3:73411362-73411381 MS.gene057071:intron 30.0%
TTAAATTCTAATTGGAGGTG+TGG - chr5.3:73412105-73412124 MS.gene057071:intron 30.0%
TTCGAGAACTAAAAAATCTC+TGG - chr5.3:73411933-73411952 MS.gene057071:CDS 30.0%
TTTGTCAAAATTAAGGGTTG+TGG - chr5.3:73411571-73411590 MS.gene057071:intron 30.0%
! GTACTTATAATTTTAGGCCT+AGG + chr5.3:73412028-73412047 None:intergenic 30.0%
! TATGACTAAAATGGTGGAAA+AGG - chr5.3:73411260-73411279 MS.gene057071:intron 30.0%
! TTATAATTTTAGGCCTAGGA+TGG + chr5.3:73412024-73412043 None:intergenic 30.0%
!! AGATTTTGGTGGAAAATTTG+TGG + chr5.3:73412737-73412756 None:intergenic 30.0%
!! TTTGGTGTATTTTAGGAACA+AGG - chr5.3:73411380-73411399 MS.gene057071:intron 30.0%
!!! CTAATGGTTTGGTGTATTTT+AGG - chr5.3:73411373-73411392 MS.gene057071:intron 30.0%
AACACAAAGAAATCTAGTGC+AGG - chr5.3:73410745-73410764 MS.gene057071:CDS 35.0%
AGAAAAAGGTAAAAGAGCCA+CGG - chr5.3:73411415-73411434 MS.gene057071:intron 35.0%
AGTTTCAGTGACTACTTACA+AGG - chr5.3:73410640-73410659 MS.gene057071:CDS 35.0%
ATCATGAAGAAAAAGGGACA+AGG + chr5.3:73410957-73410976 None:intergenic 35.0%
ATTACCTTTCATCTAGGTCA+GGG - chr5.3:73411969-73411988 MS.gene057071:CDS 35.0%
CATTGAAGTGGAAGCAAATA+GGG + chr5.3:73412648-73412667 None:intergenic 35.0%
CTATTTGCTTCCACTTCAAT+GGG - chr5.3:73412647-73412666 MS.gene057071:CDS 35.0%
GAAGTGCATTGTGAAGAAAA+GGG - chr5.3:73412502-73412521 MS.gene057071:CDS 35.0%
GAGACTTATCATCACTAGTA+GGG - chr5.3:73410767-73410786 MS.gene057071:CDS 35.0%
GAGATTGATCATCTTGAAGA+TGG - chr5.3:73411459-73411478 MS.gene057071:intron 35.0%
GGAAAATTTGTGGATCACTT+TGG + chr5.3:73412727-73412746 None:intergenic 35.0%
TATGACAGCTTCATTAGATG+AGG + chr5.3:73410824-73410843 None:intergenic 35.0%
TATTACCTTTCATCTAGGTC+AGG - chr5.3:73411968-73411987 MS.gene057071:CDS 35.0%
TGAAGAACAAGACAAGTCAA+AGG + chr5.3:73410695-73410714 None:intergenic 35.0%
TTACTACCATCATCATTTCC+TGG - chr5.3:73412839-73412858 MS.gene057071:CDS 35.0%
TTGAGTTCATCGTGATAGAA+AGG + chr5.3:73410559-73410578 None:intergenic 35.0%
! ACAAGTCAAAGGCTTTTGAT+AGG + chr5.3:73410684-73410703 None:intergenic 35.0%
! AGAAGTGCATTGTGAAGAAA+AGG - chr5.3:73412501-73412520 MS.gene057071:CDS 35.0%
! CAAGTCAAAGGCTTTTGATA+GGG + chr5.3:73410683-73410702 None:intergenic 35.0%
! CTTTGTGTTGTTGTCATCAA+TGG + chr5.3:73410734-73410753 None:intergenic 35.0%
! GGTAGTTTCTGAGAATTTAG+TGG + chr5.3:73412278-73412297 None:intergenic 35.0%
! TCATCACAATTGATGGATCT+TGG + chr5.3:73412541-73412560 None:intergenic 35.0%
! TGTTTTCCAGGAAATGATGA+TGG + chr5.3:73412848-73412867 None:intergenic 35.0%
!! CTCAGATTTTCAAGAGAAGT+GGG + chr5.3:73412314-73412333 None:intergenic 35.0%
!! GAGGATGATTCTGAAGATTT+TGG + chr5.3:73410805-73410824 None:intergenic 35.0%
!! TGATTTTGACGGAAGAGTTT+GGG + chr5.3:73412217-73412236 None:intergenic 35.0%
!!! TGGCTGCTTATCTTTTTTGT+TGG + chr5.3:73410860-73410879 None:intergenic 35.0%
AAGTACAGTGGTGTGAATGT+AGG - chr5.3:73411217-73411236 MS.gene057071:intron 40.0%
CCAAAATTAGGGTGTGAAGA+TGG - chr5.3:73410877-73410896 MS.gene057071:CDS 40.0%
CCACTTCTCTTGAAAATCTG+AGG - chr5.3:73412312-73412331 MS.gene057071:intron 40.0%
CCATTGAAGTGGAAGCAAAT+AGG + chr5.3:73412649-73412668 None:intergenic 40.0%
CCTATTTGCTTCCACTTCAA+TGG - chr5.3:73412646-73412665 MS.gene057071:CDS 40.0%
GGAGACTTATCATCACTAGT+AGG - chr5.3:73410766-73410785 MS.gene057071:CDS 40.0%
GGATCACTTTGGCTATAAGT+TGG + chr5.3:73412716-73412735 None:intergenic 40.0%
TAGATCAATGGAGGGTAAGA+AGG - chr5.3:73410984-73411003 MS.gene057071:intron 40.0%
TCTGAGAATTTAGTGGCCTA+GGG + chr5.3:73412271-73412290 None:intergenic 40.0%
TGACTACTTACAAGGTTCCA+TGG - chr5.3:73410648-73410667 MS.gene057071:CDS 40.0%
TTAGTCAAGAATGCAAACCG+TGG + chr5.3:73411435-73411454 None:intergenic 40.0%
! CCATCTTCACACCCTAATTT+TGG + chr5.3:73410880-73410899 None:intergenic 40.0%
! GATGAGGTTGTGGAAGATTT+TGG + chr5.3:73412751-73412770 None:intergenic 40.0%
! TGATAGGGTGTTATAGTCCA+TGG + chr5.3:73410668-73410687 None:intergenic 40.0%
! TGATGATGACAACAACATGG+AGG + chr5.3:73412621-73412640 None:intergenic 40.0%
! TGGTGATGATGACAACAACA+TGG + chr5.3:73412624-73412643 None:intergenic 40.0%
! TTCTGAGAATTTAGTGGCCT+AGG + chr5.3:73412272-73412291 None:intergenic 40.0%
!! CCTCAGATTTTCAAGAGAAG+TGG + chr5.3:73412315-73412334 None:intergenic 40.0%
!! GTGATTTTGACGGAAGAGTT+TGG + chr5.3:73412218-73412237 None:intergenic 40.0%
AACCATAGTCACGACGAAGT+TGG + chr5.3:73412808-73412827 None:intergenic 45.0%
AGAAGTGGGAAACCTAGATC+AGG + chr5.3:73412300-73412319 None:intergenic 45.0%
AGGGACAAGGAAAGAAGAAG+AGG + chr5.3:73410944-73410963 None:intergenic 45.0%
ATCACTGTCCAGCAACACTT+AGG - chr5.3:73412585-73412604 MS.gene057071:CDS 45.0%
ATGTCCCTGACCTAGATGAA+AGG + chr5.3:73411976-73411995 None:intergenic 45.0%
CTCAGAAACTACCCTGATCT+AGG - chr5.3:73412285-73412304 MS.gene057071:intron 45.0%
GAAGTGGAAGCAAATAGGGA+TGG + chr5.3:73412644-73412663 None:intergenic 45.0%
GAAGTGGGAAACCTAGATCA+GGG + chr5.3:73412299-73412318 None:intergenic 45.0%
GTGCATTGTGAAGAAAAGGG+TGG - chr5.3:73412505-73412524 MS.gene057071:CDS 45.0%
TCAAATTGTGGATCAGCCCT+AGG - chr5.3:73412252-73412271 MS.gene057071:intron 45.0%
TCAAGAATAGTCCGTACCCA+AGG - chr5.3:73411514-73411533 MS.gene057071:intron 45.0%
TCACTGTCCAGCAACACTTA+GGG - chr5.3:73412586-73412605 MS.gene057071:CDS 45.0%
TGCTTCCACTTCAATGGGAT+TGG - chr5.3:73412652-73412671 MS.gene057071:CDS 45.0%
TTCCAACTTCGTCGTGACTA+TGG - chr5.3:73412803-73412822 MS.gene057071:CDS 45.0%
TTGCTCCAATCCCATTGAAG+TGG + chr5.3:73412660-73412679 None:intergenic 45.0%
! ATATCTGAGACATGGTGAGG+AGG - chr5.3:73411994-73412013 MS.gene057071:CDS 45.0%
! GACATATCTGAGACATGGTG+AGG - chr5.3:73411991-73412010 MS.gene057071:CDS 45.0%
! GAGGTTGTGGAAGATTTTGG+TGG + chr5.3:73412748-73412767 None:intergenic 45.0%
! TAAGTGTTGCTGGACAGTGA+TGG + chr5.3:73412586-73412605 None:intergenic 45.0%
! TATCTGAGACATGGTGAGGA+GGG - chr5.3:73411995-73412014 MS.gene057071:CDS 45.0%
! TCAGGGACATATCTGAGACA+TGG - chr5.3:73411986-73412005 MS.gene057071:CDS 45.0%
! TGTTGTTGCTGTTGCTGATG+AGG + chr5.3:73412767-73412786 None:intergenic 45.0%
!! GAAGAGTTTGGGATGATGGA+AGG + chr5.3:73412206-73412225 None:intergenic 45.0%
CACTGTCCAGCAACACTTAG+GGG - chr5.3:73412587-73412606 MS.gene057071:CDS 50.0%
TGCTGTTGCTGATGAGGTTG+TGG + chr5.3:73412761-73412780 None:intergenic 50.0%
! GACGGAAGAGTTTGGGATGA+TGG + chr5.3:73412210-73412229 None:intergenic 50.0%
! GCATTACCCCTAAGTGTTGC+TGG + chr5.3:73412596-73412615 None:intergenic 50.0%
!! GTTTGGGATGATGGAAGGCT+AGG + chr5.3:73412201-73412220 None:intergenic 50.0%
CTGAGACATGGTGAGGAGGG+TGG - chr5.3:73411998-73412017 MS.gene057071:CDS 60.0%
GTGAGGAGGGTGGCCATCCT+AGG - chr5.3:73412008-73412027 MS.gene057071:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 73410535 73412877 73410535 ID=MS.gene057071
chr5.3 mRNA 73410535 73412877 73410535 ID=MS.gene057071.t1;Parent=MS.gene057071
chr5.3 exon 73412489 73412877 73412489 ID=MS.gene057071.t1.exon1;Parent=MS.gene057071.t1
chr5.3 CDS 73412489 73412877 73412489 ID=cds.MS.gene057071.t1;Parent=MS.gene057071.t1
chr5.3 exon 73411877 73412017 73411877 ID=MS.gene057071.t1.exon2;Parent=MS.gene057071.t1
chr5.3 CDS 73411877 73412017 73411877 ID=cds.MS.gene057071.t1;Parent=MS.gene057071.t1
chr5.3 exon 73410535 73410934 73410535 ID=MS.gene057071.t1.exon3;Parent=MS.gene057071.t1
chr5.3 CDS 73410535 73410934 73410535 ID=cds.MS.gene057071.t1;Parent=MS.gene057071.t1
Gene Sequence

>MS.gene057071

ATGGCTAATGAGAATCATGATCCTTTCTATCACGATGAACTCAATCACTCTAACTTTTCATTTTCACAAAACTTTCAAGGATTTGATCCTTCTTCTCATAGTACAAGTTTCAGTGACTACTTACAAGGTTCCATGGACTATAACACCCTATCAAAAGCCTTTGACTTGTCTTGTTCTTCATCTGAAGTGATTTCTTCCATTGATGACAACAACACAAAGAAATCTAGTGCAGGAGACTTATCATCACTAGTAGGGATTAGTGAGACACCAAAATCTTCAGAATCATCCTCATCTAATGAAGCTGTCATAGAAGAAAACTCAACCAACAAAAAAGATAAGCAGCCAAAATTAGGGTGTGAAGATGGAGATGATGAAAAGTCTAAGAAAGAGTAGGTTTTTCATGTCACCTCTTCTTCTTTCCTTGTCCCTTTTTCTTCATGATTTTTTGATAGATCAATGGAGGGTAAGAAGGTTTTTCTTCAAATATATATAGTTTCTTTTTTTTTTTCTATTCCTTTAATTCATGAGTAGATAGGAATCATGATTTTTTGTTGTTTACTTTGTGGTAGAATTTTGATTTTTCATTGAATTACTATAATGGAATTATATTTTATTTTCAACACCTAATTATGACATTTTCAGTGTCTCTTATGAATTGAATCTAGTCAATCTTGTCTATATTAAGTACAGTGGTGTGAATGTAGGTTTTGTTACTTTTGTGTATATATGACTAAAATGGTGGAAAAGGAACTTAACCCTAATGTACATACATTTCTTATGATGAGTTTGGCAAGTTTTATTATATGCAAGATTTATGTATCTATTGTTGTGAATTTGTCTAATGGTTTGGTGTATTTTAGGAACAAGGCTAAAAAGAAAGAGAAAAAGGTAAAAGAGCCACGGTTTGCATTCTTGACTAAAAGTGAGATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCGTACCCAAGGTTAAATTATTTCCAATTTTCAAATTTAGTAATTTTTTGTCAAAATTAAGGGTTGTGGAACTTGACCTTTAAAATAAAATGATGAAGGGTTGTGGAACTTAAGTGTCAAAATCATTAATATTAACATAAAGATTCTTTAAATTATTTTTCTATATATTTATTTTTTCTCATAGTTGATGTAACTACTCATATAATCGTCCTCGCATAATTAAGATTTTGAAACAGTTCTACAACCCTTTGTAGATACAAATTACTATTTCTAAAACTTGTTTTTGTTTTCAAATATTTAATAATGAAATTTATATGATCATATTACACAAATGTACATATATTCAACAATATAATGAAGTCAAATGATTAATGAATCACAAGTAAATGACTACTCTTAAGGGTTGAGTTCGAGAACTAAAAAATCTCTGGTCATGCTTTACTTATTACCTTTCATCTAGGTCAGGGACATATCTGAGACATGGTGAGGAGGGTGGCCATCCTAGGCCTAAAATTATAAGTACGAAATTTAGGTTCTAACAAAAAAACAATTGGGGTTCATTAGGCCCTAAAAAAATTACTTAAATTCTAATTGGAGGTGTGGTTGTTAGTAACAAACTTAGTTCTTTGTTGACCAATTTATAATTTATTGTGATGTTATAGGAGTTCAAAATCCTAGCCTTCCATCATCCCAAACTCTTCCGTCAAAATCACTTTGAAAATTTAATTCAAATTGTGGATCAGCCCTAGGCCACTAAATTCTCAGAAACTACCCTGATCTAGGTTTCCCACTTCTCTTGAAAATCTGAGGATACGAGCAAAAAAATTAACAATATAACTACTAATACATATATTAGTTTCACAAGAAATATACCTCTAATCCTATTCCATATTTCATGTCATAGCATAAGTCTAAGAGTACTAATGTTATCTATGTATATGTATACAATGCAGGAGCTATTATAGATGCACAAGTCAGAAGTGCATTGTGAAGAAAAGGGTGGAAAGATCATACCAAGATCCATCAATTGTGATGACAACATATGAAGGACAACACAACCATCACTGTCCAGCAACACTTAGGGGTAATGCTTCCTCCATGTTGTTGTCATCATCACCATCCCTATTTGCTTCCACTTCAATGGGATTGGAGCAAAGATTACACCAAGATTTCTTTTCTCAGTTTCTTCCAACTTATAGCCAAAGTGATCCACAAATTTTCCACCAAAATCTTCCACAACCTCATCAGCAACAGCAACAACAACATCAGCAGCAGCAGTTCCAACTTCGTCGTGACTATGGTTTGTTGCAAGATTTACTACCATCATCATTTCCTGGAAAACAAGAGCCTTGA
Protein sequence

>MS.gene057071.t1

MANENHDPFYHDELNHSNFSFSQNFQGFDPSSHSTSFSDYLQGSMDYNTLSKAFDLSCSSSEVISSIDDNNTKKSSAGDLSSLVGISETPKSSESSSSNEAVIEENSTNKKDKQPKLGCEDGDDEKSKKENKAKKKEKKVKEPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPSIVMTTYEGQHNHHCPATLRGNASSMLLSSSPSLFASTSMGLEQRLHQDFFSQFLPTYSQSDPQIFHQNLPQPHQQQQQQHQQQQFQLRRDYGLLQDLLPSSFPGKQEP