Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75521.t1 | XP_003601902.1 | 99 | 399 | 4 | 0 | 1 | 399 | 1 | 399 | 4.20E-240 | 840.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75521.t1 | G7J360 | 99.0 | 399 | 4 | 0 | 1 | 399 | 1 | 399 | 3.0e-240 | 840.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene75521 | 0.835834 | 1.33E-56 | -1.69E-46 |
| MS.gene04920 | MS.gene75521 | 0.817799 | 2.73E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene75521 | 0.85917 | 4.98E-63 | -1.69E-46 |
| MS.gene049283 | MS.gene75521 | 0.849141 | 3.91E-60 | -1.69E-46 |
| MS.gene049343 | MS.gene75521 | 0.825044 | 5.81E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene75521 | 0.826006 | 3.44E-54 | -1.69E-46 |
| MS.gene049652 | MS.gene75521 | 0.801723 | 7.87E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene75521 | 0.808433 | 3.10E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene75521 | 0.814547 | 1.46E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene75521 | 0.850689 | 1.44E-60 | -1.69E-46 |
| MS.gene050561 | MS.gene75521 | 0.842034 | 3.31E-58 | -1.69E-46 |
| MS.gene050562 | MS.gene75521 | 0.839684 | 1.37E-57 | -1.69E-46 |
| MS.gene050945 | MS.gene75521 | 0.83116 | 1.95E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene75521 | 0.819772 | 9.74E-53 | -1.69E-46 |
| MS.gene051332 | MS.gene75521 | 0.822408 | 2.41E-53 | -1.69E-46 |
| MS.gene051343 | MS.gene75521 | 0.800227 | 1.59E-48 | -1.69E-46 |
| MS.gene051363 | MS.gene75521 | 0.80441 | 2.19E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene75521 | 0.82764 | 1.40E-54 | -1.69E-46 |
| MS.gene051637 | MS.gene75521 | 0.822461 | 2.34E-53 | -1.69E-46 |
| MS.gene051699 | MS.gene75521 | 0.80434 | 2.26E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene75521 | 0.876629 | 1.20E-68 | -1.69E-46 |
| MS.gene051832 | MS.gene75521 | 0.801356 | 9.36E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene75521 | 0.812486 | 4.14E-51 | -1.69E-46 |
| MS.gene052533 | MS.gene75521 | 0.827631 | 1.41E-54 | -1.69E-46 |
| MS.gene052534 | MS.gene75521 | 0.828188 | 1.03E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene75521 | 0.823746 | 1.17E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene75521 | 0.833005 | 6.84E-56 | -1.69E-46 |
| MS.gene052717 | MS.gene75521 | 0.834416 | 3.04E-56 | -1.69E-46 |
| MS.gene05308 | MS.gene75521 | 0.804235 | 2.38E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene75521 | 0.81128 | 7.57E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene75521 | 0.859032 | 5.48E-63 | -1.69E-46 |
| MS.gene053272 | MS.gene75521 | -0.844446 | 7.52E-59 | -1.69E-46 |
| MS.gene053296 | MS.gene75521 | 0.801575 | 8.44E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene75521 | 0.841131 | 5.72E-58 | -1.69E-46 |
| MS.gene053963 | MS.gene75521 | 0.807319 | 5.36E-50 | -1.69E-46 |
| MS.gene053995 | MS.gene75521 | 0.804522 | 2.08E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene75521 | 0.820973 | 5.17E-53 | -1.69E-46 |
| MS.gene054576 | MS.gene75521 | 0.82999 | 3.78E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene75521 | 0.847703 | 9.78E-60 | -1.69E-46 |
| MS.gene054892 | MS.gene75521 | 0.830443 | 2.93E-55 | -1.69E-46 |
| MS.gene054893 | MS.gene75521 | 0.830854 | 2.32E-55 | -1.69E-46 |
| MS.gene054957 | MS.gene75521 | 0.843313 | 1.51E-58 | -1.69E-46 |
| MS.gene055386 | MS.gene75521 | 0.831522 | 1.59E-55 | -1.69E-46 |
| MS.gene055506 | MS.gene75521 | 0.802724 | 4.90E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene75521 | 0.81758 | 3.06E-52 | -1.69E-46 |
| MS.gene055586 | MS.gene75521 | 0.835417 | 1.70E-56 | -1.69E-46 |
| MS.gene055589 | MS.gene75521 | 0.813847 | 2.08E-51 | -1.69E-46 |
| MS.gene055694 | MS.gene75521 | 0.806709 | 7.21E-50 | -1.69E-46 |
| MS.gene055724 | MS.gene75521 | 0.805918 | 1.06E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene75521 | 0.829843 | 4.10E-55 | -1.69E-46 |
| MS.gene056050 | MS.gene75521 | 0.833694 | 4.60E-56 | -1.69E-46 |
| MS.gene056174 | MS.gene75521 | 0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene75521 | 0.809108 | 2.23E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene75521 | 0.840781 | 7.07E-58 | -1.69E-46 |
| MS.gene05686 | MS.gene75521 | 0.868307 | 7.19E-66 | -1.69E-46 |
| MS.gene05689 | MS.gene75521 | 0.814885 | 1.23E-51 | -1.69E-46 |
| MS.gene05690 | MS.gene75521 | 0.807108 | 5.94E-50 | -1.69E-46 |
| MS.gene056973 | MS.gene75521 | 0.827616 | 1.42E-54 | -1.69E-46 |
| MS.gene057034 | MS.gene75521 | 0.848903 | 4.56E-60 | -1.69E-46 |
| MS.gene057071 | MS.gene75521 | 0.81002 | 1.42E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene75521 | 0.851649 | 7.74E-61 | -1.69E-46 |
| MS.gene057208 | MS.gene75521 | 0.872684 | 2.63E-67 | -1.69E-46 |
| MS.gene057611 | MS.gene75521 | 0.825288 | 5.09E-54 | -1.69E-46 |
| MS.gene058008 | MS.gene75521 | 0.82637 | 2.82E-54 | -1.69E-46 |
| MS.gene058009 | MS.gene75521 | 0.814158 | 1.78E-51 | -1.69E-46 |
| MS.gene058095 | MS.gene75521 | 0.825667 | 4.14E-54 | -1.69E-46 |
| MS.gene058781 | MS.gene75521 | 0.844927 | 5.58E-59 | -1.69E-46 |
| MS.gene058783 | MS.gene75521 | 0.831695 | 1.44E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene75521 | 0.806867 | 6.68E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene75521 | 0.823018 | 1.74E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene75521 | 0.800103 | 1.69E-48 | -1.69E-46 |
| MS.gene059634 | MS.gene75521 | 0.816225 | 6.17E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene75521 | -0.887009 | 2.08E-72 | -1.69E-46 |
| MS.gene059901 | MS.gene75521 | -0.811061 | 8.45E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene75521 | 0.838698 | 2.46E-57 | -1.69E-46 |
| MS.gene060244 | MS.gene75521 | 0.807552 | 4.78E-50 | -1.69E-46 |
| MS.gene060258 | MS.gene75521 | 0.814004 | 1.92E-51 | -1.69E-46 |
| MS.gene060338 | MS.gene75521 | 0.816403 | 5.63E-52 | -1.69E-46 |
| MS.gene060365 | MS.gene75521 | 0.830013 | 3.73E-55 | -1.69E-46 |
| MS.gene060522 | MS.gene75521 | 0.844564 | 6.99E-59 | -1.69E-46 |
| MS.gene060525 | MS.gene75521 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene060716 | MS.gene75521 | 0.813834 | 2.09E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene75521 | 0.834813 | 2.41E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene75521 | 0.862743 | 4.08E-64 | -1.69E-46 |
| MS.gene060937 | MS.gene75521 | 0.859032 | 5.48E-63 | -1.69E-46 |
| MS.gene061100 | MS.gene75521 | 0.804872 | 1.75E-49 | -1.69E-46 |
| MS.gene061160 | MS.gene75521 | 0.813049 | 3.12E-51 | -1.69E-46 |
| MS.gene061188 | MS.gene75521 | 0.833629 | 4.78E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75521.t1 | MTR_3g086610 | 98.997 | 399 | 4 | 0 | 1 | 399 | 1 | 399 | 0.0 | 823 |
| MS.gene75521.t1 | MTR_3g086610 | 99.171 | 362 | 3 | 0 | 1 | 362 | 1 | 362 | 0.0 | 746 |
| MS.gene75521.t1 | MTR_8g089815 | 78.589 | 397 | 83 | 2 | 1 | 397 | 1 | 395 | 0.0 | 669 |
| MS.gene75521.t1 | MTR_8g089820 | 72.519 | 393 | 103 | 2 | 7 | 399 | 2 | 389 | 0.0 | 580 |
| MS.gene75521.t1 | MTR_7g033300 | 71.618 | 377 | 100 | 2 | 17 | 386 | 1 | 377 | 0.0 | 565 |
| MS.gene75521.t1 | MTR_2g094650 | 65.026 | 386 | 129 | 3 | 1 | 385 | 1 | 381 | 0.0 | 539 |
| MS.gene75521.t1 | MTR_2g094650 | 64.858 | 387 | 129 | 4 | 1 | 385 | 1 | 382 | 0.0 | 535 |
| MS.gene75521.t1 | MTR_4g058800 | 68.219 | 365 | 113 | 3 | 25 | 386 | 1 | 365 | 0.0 | 528 |
| MS.gene75521.t1 | MTR_2g012570 | 51.504 | 266 | 118 | 7 | 102 | 356 | 78 | 343 | 1.46e-88 | 272 |
| MS.gene75521.t1 | MTR_2g012570 | 51.504 | 266 | 118 | 7 | 102 | 356 | 52 | 317 | 1.66e-88 | 271 |
| MS.gene75521.t1 | MTR_2g012570 | 51.504 | 266 | 118 | 7 | 102 | 356 | 52 | 317 | 1.03e-87 | 271 |
| MS.gene75521.t1 | MTR_2g012570 | 51.504 | 266 | 118 | 7 | 102 | 356 | 78 | 343 | 1.12e-87 | 271 |
| MS.gene75521.t1 | MTR_1g078290 | 47.687 | 281 | 134 | 6 | 98 | 365 | 75 | 355 | 1.47e-83 | 260 |
| MS.gene75521.t1 | MTR_1g078290 | 45.902 | 305 | 143 | 7 | 98 | 380 | 75 | 379 | 4.77e-83 | 259 |
| MS.gene75521.t1 | MTR_1g078290 | 47.687 | 281 | 134 | 6 | 98 | 365 | 75 | 355 | 7.94e-83 | 259 |
| MS.gene75521.t1 | MTR_4g090465 | 50.996 | 251 | 116 | 6 | 104 | 347 | 430 | 680 | 2.13e-81 | 264 |
| MS.gene75521.t1 | MTR_2g005330 | 45.552 | 281 | 145 | 6 | 82 | 354 | 60 | 340 | 3.14e-81 | 253 |
| MS.gene75521.t1 | MTR_2g005330 | 45.714 | 280 | 144 | 6 | 82 | 353 | 60 | 339 | 1.60e-80 | 253 |
| MS.gene75521.t1 | MTR_1g078290 | 48.760 | 242 | 112 | 5 | 98 | 327 | 75 | 316 | 1.90e-75 | 237 |
| MS.gene75521.t1 | MTR_2g005330 | 52.792 | 197 | 88 | 4 | 162 | 353 | 1 | 197 | 4.73e-67 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75521.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene75521.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene75521.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 1 | 385 | 0.0 | 610 |
| MS.gene75521.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene75521.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene75521.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene75521.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene75521.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 600 |
| MS.gene75521.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 600 |
| MS.gene75521.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 600 |
| MS.gene75521.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 600 |
| MS.gene75521.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 599 |
| MS.gene75521.t1 | AT1G13000 | 66.080 | 398 | 125 | 3 | 6 | 399 | 10 | 401 | 0.0 | 575 |
| MS.gene75521.t1 | AT1G13000 | 66.080 | 398 | 125 | 3 | 6 | 399 | 10 | 401 | 0.0 | 575 |
| MS.gene75521.t1 | AT1G13000 | 66.080 | 398 | 125 | 3 | 6 | 399 | 10 | 401 | 0.0 | 575 |
| MS.gene75521.t1 | AT1G13000 | 66.080 | 398 | 125 | 3 | 6 | 399 | 10 | 401 | 0.0 | 575 |
| MS.gene75521.t1 | AT2G28310 | 68.312 | 385 | 105 | 2 | 1 | 385 | 1 | 368 | 0.0 | 568 |
| MS.gene75521.t1 | AT2G28310 | 68.312 | 385 | 105 | 2 | 1 | 385 | 1 | 368 | 0.0 | 568 |
| MS.gene75521.t1 | AT2G28310 | 68.312 | 385 | 105 | 2 | 1 | 385 | 1 | 368 | 0.0 | 568 |
| MS.gene75521.t1 | AT1G08040 | 70.876 | 388 | 101 | 3 | 1 | 387 | 1 | 377 | 0.0 | 566 |
| MS.gene75521.t1 | AT1G08040 | 70.876 | 388 | 101 | 3 | 1 | 387 | 1 | 377 | 0.0 | 566 |
| MS.gene75521.t1 | AT1G08040 | 70.876 | 388 | 101 | 3 | 1 | 387 | 1 | 377 | 0.0 | 566 |
| MS.gene75521.t1 | AT1G08040 | 70.619 | 388 | 98 | 4 | 1 | 387 | 1 | 373 | 0.0 | 561 |
| MS.gene75521.t1 | AT3G26440 | 66.667 | 393 | 122 | 4 | 6 | 397 | 33 | 417 | 0.0 | 560 |
| MS.gene75521.t1 | AT3G26440 | 66.667 | 393 | 122 | 4 | 6 | 397 | 33 | 417 | 0.0 | 560 |
| MS.gene75521.t1 | AT3G26440 | 66.667 | 393 | 122 | 4 | 6 | 397 | 10 | 394 | 0.0 | 558 |
| MS.gene75521.t1 | AT3G26440 | 66.667 | 393 | 122 | 4 | 6 | 397 | 10 | 394 | 0.0 | 558 |
| MS.gene75521.t1 | AT3G26440 | 64.721 | 394 | 104 | 5 | 6 | 397 | 10 | 370 | 0.0 | 531 |
| MS.gene75521.t1 | AT3G26440 | 67.493 | 363 | 110 | 3 | 6 | 367 | 10 | 365 | 0.0 | 523 |
| MS.gene75521.t1 | AT1G24570 | 65.013 | 383 | 116 | 4 | 17 | 397 | 19 | 385 | 0.0 | 516 |
| MS.gene75521.t1 | AT1G24570 | 62.924 | 383 | 117 | 5 | 17 | 397 | 19 | 378 | 1.26e-174 | 492 |
| MS.gene75521.t1 | AT1G13000 | 66.871 | 326 | 103 | 2 | 6 | 327 | 10 | 334 | 1.23e-168 | 475 |
| MS.gene75521.t1 | AT4G12840 | 52.045 | 269 | 116 | 8 | 98 | 356 | 76 | 341 | 4.09e-91 | 280 |
| MS.gene75521.t1 | AT4G12840 | 52.045 | 269 | 116 | 8 | 98 | 356 | 76 | 341 | 5.90e-91 | 280 |
| MS.gene75521.t1 | AT1G11170 | 48.540 | 274 | 132 | 6 | 102 | 366 | 83 | 356 | 8.22e-84 | 260 |
| MS.gene75521.t1 | AT4G12840 | 52.000 | 250 | 107 | 8 | 117 | 356 | 1 | 247 | 1.16e-83 | 258 |
| MS.gene75521.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 13 | 285 | 1.17e-83 | 259 |
| MS.gene75521.t1 | AT1G11170 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.26e-83 | 261 |
| MS.gene75521.t1 | AT1G11170 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.26e-83 | 261 |
| MS.gene75521.t1 | AT1G11170 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.26e-83 | 261 |
| MS.gene75521.t1 | AT1G11170 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.26e-83 | 261 |
| MS.gene75521.t1 | AT1G11170 | 50.588 | 255 | 117 | 6 | 102 | 347 | 83 | 337 | 7.14e-83 | 257 |
| MS.gene75521.t1 | AT1G11170 | 50.588 | 255 | 117 | 6 | 102 | 347 | 83 | 337 | 7.14e-83 | 257 |
| MS.gene75521.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene75521.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene75521.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene75521.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene75521.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene75521.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene75521.t1 | AT1G61240 | 48.889 | 270 | 129 | 6 | 102 | 362 | 80 | 349 | 1.54e-82 | 257 |
| MS.gene75521.t1 | AT4G18530 | 47.170 | 265 | 122 | 7 | 96 | 347 | 69 | 328 | 1.27e-80 | 253 |
| MS.gene75521.t1 | AT4G18530 | 47.170 | 265 | 122 | 7 | 96 | 347 | 64 | 323 | 1.55e-80 | 253 |
| MS.gene75521.t1 | AT1G11170 | 51.082 | 231 | 105 | 5 | 102 | 324 | 83 | 313 | 2.37e-74 | 235 |
| MS.gene75521.t1 | AT4G18530 | 46.473 | 241 | 112 | 6 | 96 | 324 | 69 | 304 | 5.95e-72 | 228 |
| MS.gene75521.t1 | AT2G25905 | 48.485 | 231 | 96 | 5 | 17 | 246 | 19 | 227 | 3.27e-64 | 205 |
| MS.gene75521.t1 | AT1G11170 | 51.786 | 168 | 76 | 3 | 104 | 266 | 85 | 252 | 5.09e-52 | 174 |
Find 108 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATGACTATATATTTATA+TGG | 0.213074 | 3.3:+72294574 | MS.gene75521:CDS |
| TTGCCATGTCAACCCTTTAT+TGG | 0.257735 | 3.3:-72294775 | None:intergenic |
| ACGCTGCACAAGGAGGTAAA+TGG | 0.258388 | 3.3:-72294967 | None:intergenic |
| CCCCTGCCATGGTGCTTTCC+CGG | 0.260665 | 3.3:-72295654 | None:intergenic |
| TCTGCTCCTCTTGGATTTGA+TGG | 0.289728 | 3.3:-72293888 | None:intergenic |
| TGCCATGTCAACCCTTTATT+GGG | 0.303558 | 3.3:-72294774 | None:intergenic |
| CCTGGTTTAGAACCCAATAA+AGG | 0.308435 | 3.3:+72294762 | MS.gene75521:CDS |
| TTGTGTCTGGCATATGATTC+AGG | 0.313499 | 3.3:+72295123 | MS.gene75521:CDS |
| ATGCAGGTTTGTTGAGATTA+TGG | 0.320597 | 3.3:+72295072 | MS.gene75521:intron |
| GGCAGGTGAGGGAGAGATGT+AGG | 0.349851 | 3.3:+72295829 | MS.gene75521:intron |
| CGCTGCACAAGGAGGTAAAT+GGG | 0.354183 | 3.3:-72294966 | None:intergenic |
| TATTGATGCAGCCGTGAAAA+AGG | 0.363474 | 3.3:+72294156 | MS.gene75521:CDS |
| ATCCTTCTATTTCATTATGA+TGG | 0.372976 | 3.3:+72294280 | MS.gene75521:CDS |
| TTGCAGGGTAAAACTGAAAC+CGG | 0.384720 | 3.3:+72295635 | MS.gene75521:intron |
| GGTAAACTTTCTGCTCCTCT+TGG | 0.388659 | 3.3:-72293897 | None:intergenic |
| GGCCATCATAATGAAATAGA+AGG | 0.390690 | 3.3:-72294282 | None:intergenic |
| GAGAAGCATGGCGTTGTGTC+TGG | 0.390721 | 3.3:+72295110 | MS.gene75521:CDS |
| CATGCTTCTCGCGAGAATAC+TGG | 0.396635 | 3.3:-72295097 | None:intergenic |
| CAAGTGCAGGTACTTAAAAC+TGG | 0.397978 | 3.3:+72294710 | MS.gene75521:intron |
| GTGCTCGCAAACAGACTAAA+TGG | 0.402665 | 3.3:+72294356 | MS.gene75521:CDS |
| AATAAGCCTCATAATTTCAC+TGG | 0.409734 | 3.3:-72293341 | None:intergenic |
| TTGCAGTTCAATCTCCCATC+TGG | 0.411688 | 3.3:+72293550 | MS.gene75521:intron |
| GTGTCATTTGATAAGTGATT+TGG | 0.412581 | 3.3:-72293667 | None:intergenic |
| TAGAGTGACGGAGGAGAAAC+CGG | 0.412831 | 3.3:+72294928 | MS.gene75521:intron |
| AACCGGGAAAGCACCATGGC+AGG | 0.417235 | 3.3:+72295652 | MS.gene75521:CDS |
| TGTTCCCACACTAGGAAATC+AGG | 0.418886 | 3.3:+72295517 | MS.gene75521:CDS |
| TTTATTGGATGCAGTCCTAA+TGG | 0.423254 | 3.3:+72293310 | MS.gene75521:intron |
| CTGGTTTAGAACCCAATAAA+GGG | 0.442489 | 3.3:+72294763 | MS.gene75521:CDS |
| ATTTATATGGGATGAAGACT+TGG | 0.443996 | 3.3:+72294587 | MS.gene75521:CDS |
| TACATTGAAGAAAGATATAC+AGG | 0.451027 | 3.3:+72293598 | MS.gene75521:CDS |
| CATATAAATATATAGTCATA+TGG | 0.467190 | 3.3:-72294573 | None:intergenic |
| TCATATGGTGCCACAATGTC+AGG | 0.467804 | 3.3:-72294558 | None:intergenic |
| CTTGGCATTGCAGAATGACT+TGG | 0.475324 | 3.3:+72295238 | MS.gene75521:intron |
| TTGGAGTTGTCGATGCTCAA+TGG | 0.480149 | 3.3:+72295480 | MS.gene75521:CDS |
| TAGCCTGCACATGAGAAGAT+TGG | 0.483409 | 3.3:+72295461 | MS.gene75521:intron |
| GTGAAGGTCACAAGGTACTT+TGG | 0.484389 | 3.3:-72294109 | None:intergenic |
| ACCGGGAAAGCACCATGGCA+GGG | 0.486609 | 3.3:+72295653 | MS.gene75521:CDS |
| GAAAACCCAGTGAAATTATG+AGG | 0.490987 | 3.3:+72293335 | MS.gene75521:CDS |
| CCGGGAAAGCACCATGGCAG+GGG | 0.491082 | 3.3:+72295654 | MS.gene75521:CDS |
| ACTGGTGAAGAAGCATGGCC+TGG | 0.491574 | 3.3:+72294728 | MS.gene75521:CDS |
| CGACTCAGCTTCAACAATGC+CGG | 0.491664 | 3.3:-72293922 | None:intergenic |
| GGCCTGGAGATTTCACAGCC+TGG | 0.496813 | 3.3:+72294744 | MS.gene75521:CDS |
| ATGATGGCCGAGCTAATGAA+TGG | 0.499945 | 3.3:+72294296 | MS.gene75521:CDS |
| CCTTTATTGGGTTCTAAACC+AGG | 0.501314 | 3.3:-72294762 | None:intergenic |
| GATATACAGGCCGTCGTGCT+TGG | 0.507431 | 3.3:+72293611 | MS.gene75521:CDS |
| GACTCAGCTTCAACAATGCC+GGG | 0.509378 | 3.3:-72293921 | None:intergenic |
| GGTGAGGGAGAGATGTAGGA+AGG | 0.509559 | 3.3:+72295833 | MS.gene75521:intron |
| ATTAATATGTCTAATTCCAC+TGG | 0.509862 | 3.3:+72295921 | MS.gene75521:CDS |
| TCTTAAGATACACACCTCAC+TGG | 0.511552 | 3.3:-72293976 | None:intergenic |
| GAACATGCATATTTCAAGTC+CGG | 0.512196 | 3.3:+72295891 | MS.gene75521:CDS |
| ACTCCAATCTTCTCATGTGC+AGG | 0.516783 | 3.3:-72295464 | None:intergenic |
| ATATGACTATATATTTATAT+GGG | 0.518689 | 3.3:+72294575 | MS.gene75521:CDS |
| CGGCATTGTTGAAGCTGAGT+CGG | 0.519485 | 3.3:+72293923 | MS.gene75521:CDS |
| AATGACTTGGTCCATGGATG+GGG | 0.521935 | 3.3:+72295251 | MS.gene75521:CDS |
| TTTACCTGATTTCCTAGTGT+GGG | 0.526887 | 3.3:-72295521 | None:intergenic |
| AACCAGGCTGTGAAATCTCC+AGG | 0.532638 | 3.3:-72294746 | None:intergenic |
| CTTAAGATACACACCTCACT+GGG | 0.536039 | 3.3:-72293975 | None:intergenic |
| CAAAATCAAGTCCCCATCCA+TGG | 0.537352 | 3.3:-72295262 | None:intergenic |
| TCCAACATTGTCATTAACAA+AGG | 0.539794 | 3.3:+72293414 | MS.gene75521:CDS |
| GCATATTTCAAGTCCGGCGG+TGG | 0.544222 | 3.3:+72295897 | MS.gene75521:CDS |
| ATTTACCTGATTTCCTAGTG+TGG | 0.551215 | 3.3:-72295522 | None:intergenic |
| GGGAGAGATGTAGGAAGGAG+TGG | 0.553738 | 3.3:+72295838 | MS.gene75521:CDS |
| ACCTTTGTTAATGACAATGT+TGG | 0.557482 | 3.3:-72293415 | None:intergenic |
| GAATGACTTGGTCCATGGAT+GGG | 0.558080 | 3.3:+72295250 | MS.gene75521:intron |
| TTGCAGAATGACTTGGTCCA+TGG | 0.561994 | 3.3:+72295245 | MS.gene75521:intron |
| TGCAGTTAGAAGATGTGTTG+AGG | 0.565260 | 3.3:+72295283 | MS.gene75521:CDS |
| TCGAGGGAAGCAAGCCAGAT+GGG | 0.567592 | 3.3:-72293564 | None:intergenic |
| AAATGGGGACCGTTACTCGC+AGG | 0.570066 | 3.3:+72293185 | None:intergenic |
| CACCAAGGTGTTCCCACACT+AGG | 0.571590 | 3.3:+72295509 | MS.gene75521:CDS |
| TGAGTTTGAATGGTCAAAGA+AGG | 0.573343 | 3.3:+72294321 | MS.gene75521:CDS |
| CAGTATTCTCGCGAGAAGCA+TGG | 0.573602 | 3.3:+72295098 | MS.gene75521:CDS |
| AGAATGACTTGGTCCATGGA+TGG | 0.574042 | 3.3:+72295249 | MS.gene75521:intron |
| TACCTTGTGACCTTCACTGT+TGG | 0.581078 | 3.3:+72294115 | MS.gene75521:CDS |
| ACTCATCCCATTCATTAGCT+CGG | 0.581632 | 3.3:-72294303 | None:intergenic |
| ATGAATGGGATGAGTTTGAA+TGG | 0.582732 | 3.3:+72294311 | MS.gene75521:CDS |
| CATTTCATAGCCAACAGTGA+AGG | 0.584725 | 3.3:-72294125 | None:intergenic |
| ATCGAGGGAAGCAAGCCAGA+TGG | 0.584820 | 3.3:-72293565 | None:intergenic |
| TTTATATGGGATGAAGACTT+GGG | 0.588977 | 3.3:+72294588 | MS.gene75521:CDS |
| ATAAGCCTCATAATTTCACT+GGG | 0.590143 | 3.3:-72293340 | None:intergenic |
| AGAGTGACGGAGGAGAAACC+GGG | 0.592731 | 3.3:+72294929 | MS.gene75521:intron |
| ATTATCAGACCTGCGAGTAA+CGG | 0.593281 | 3.3:-72293194 | None:intergenic |
| GGAGCAGAAAGTTTACCTCC+CGG | 0.596329 | 3.3:+72293903 | MS.gene75521:CDS |
| CGCTAACCGACTCTGAAACA+TGG | 0.596779 | 3.3:-72295862 | None:intergenic |
| TTAAAACTGGTGAAGAAGCA+TGG | 0.599811 | 3.3:+72294723 | MS.gene75521:CDS |
| AGCCAACAGTGAAGGTCACA+AGG | 0.602730 | 3.3:-72294117 | None:intergenic |
| CGGGAAAGCACCATGGCAGG+GGG | 0.604779 | 3.3:+72295655 | MS.gene75521:CDS |
| AGTGGACCATGTTTCAGAGT+CGG | 0.607117 | 3.3:+72295856 | MS.gene75521:CDS |
| CTTATCAAATGACACATCAA+AGG | 0.609949 | 3.3:+72293675 | MS.gene75521:CDS |
| AACCCAATAAAGGGTTGACA+TGG | 0.618140 | 3.3:+72294772 | MS.gene75521:CDS |
| ATTTCTGCATCCTGACATTG+TGG | 0.619915 | 3.3:+72294548 | MS.gene75521:CDS |
| AGACATATTAATACCACCGC+CGG | 0.622372 | 3.3:-72295910 | None:intergenic |
| TGATGGCCGAGCTAATGAAT+GGG | 0.623524 | 3.3:+72294297 | MS.gene75521:CDS |
| GCTGCACAAGGAGGTAAATG+GGG | 0.631284 | 3.3:-72294965 | None:intergenic |
| GCAGTTACTTACGCTGCACA+AGG | 0.640937 | 3.3:-72294977 | None:intergenic |
| AATGTAAGAGAGATCAATCG+AGG | 0.643208 | 3.3:-72293581 | None:intergenic |
| CTGAAACCGGGAAAGCACCA+TGG | 0.651275 | 3.3:+72295648 | MS.gene75521:CDS |
| TGCAGGGTAAAACTGAAACC+GGG | 0.654503 | 3.3:+72295636 | MS.gene75521:intron |
| TTCCTAGTGTGGGAACACCT+TGG | 0.656990 | 3.3:-72295511 | None:intergenic |
| ATGTAAGAGAGATCAATCGA+GGG | 0.669290 | 3.3:-72293580 | None:intergenic |
| CATGCATATTTCAAGTCCGG+CGG | 0.674373 | 3.3:+72295894 | MS.gene75521:CDS |
| TGACGGAGGAGAAACCGGGA+TGG | 0.686924 | 3.3:+72294933 | MS.gene75521:CDS |
| CTGCACAAGGAGGTAAATGG+GGG | 0.692874 | 3.3:-72294964 | None:intergenic |
| ATTGTGGGGCAAACCCAGTG+AGG | 0.712457 | 3.3:+72293962 | MS.gene75521:CDS |
| TGGGTTCCATCAAATCCAAG+AGG | 0.719624 | 3.3:+72293882 | MS.gene75521:CDS |
| GCTCAATGGATTGTTCACCA+AGG | 0.733701 | 3.3:+72295494 | MS.gene75521:CDS |
| GTTACTTACGCTGCACAAGG+AGG | 0.742418 | 3.3:-72294974 | None:intergenic |
| TTATAAAAGACCAAGCACGA+CGG | 0.744122 | 3.3:-72293621 | None:intergenic |
| TCAGCTTCAACAATGCCGGG+AGG | 0.767152 | 3.3:-72293918 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGACTATATATTTATAT+GGG | + | chr3.3:72294575-72294594 | MS.gene75521:CDS | 10.0% |
| !!! | ATATTGTTTTATATAATACT+GGG | + | chr3.3:72293790-72293809 | MS.gene75521:intron | 10.0% |
| !!! | ATCTTTAATGTTTTTTTTTT+TGG | + | chr3.3:72294659-72294678 | MS.gene75521:intron | 10.0% |
| !!! | TCTTTAATGTTTTTTTTTTT+GGG | + | chr3.3:72294660-72294679 | MS.gene75521:intron | 10.0% |
| !! | AAGTTTGATATACAATAATA+AGG | - | chr3.3:72295554-72295573 | None:intergenic | 15.0% |
| !! | AATATGATAACAATCAATTA+TGG | - | chr3.3:72294487-72294506 | None:intergenic | 15.0% |
| !! | AGTTTGATATACAATAATAA+GGG | - | chr3.3:72295553-72295572 | None:intergenic | 15.0% |
| !! | CATATAAATATATAGTCATA+TGG | - | chr3.3:72294576-72294595 | None:intergenic | 15.0% |
| !! | CATATGACTATATATTTATA+TGG | + | chr3.3:72294574-72294593 | MS.gene75521:CDS | 15.0% |
| !!! | GATATTGTTTTATATAATAC+TGG | + | chr3.3:72293789-72293808 | MS.gene75521:intron | 15.0% |
| !!! | TTTTAGTTGTTTTTTGTTAT+TGG | + | chr3.3:72293494-72293513 | MS.gene75521:intron | 15.0% |
| !! | AATTACAATTGTATAACTCT+TGG | + | chr3.3:72295220-72295239 | MS.gene75521:intron | 20.0% |
| !! | ATCATTAAACAACTAATTAG+TGG | - | chr3.3:72295183-72295202 | None:intergenic | 20.0% |
| !! | CATTGATACATAATTGATAT+GGG | + | chr3.3:72293755-72293774 | MS.gene75521:intron | 20.0% |
| !! | GTTTAATATACTTTGAATGT+TGG | - | chr3.3:72295731-72295750 | None:intergenic | 20.0% |
| !! | GTTTGATATACAATAATAAG+GGG | - | chr3.3:72295552-72295571 | None:intergenic | 20.0% |
| !! | TCATTAAACAACTAATTAGT+GGG | - | chr3.3:72295182-72295201 | None:intergenic | 20.0% |
| !! | TCATTGATACATAATTGATA+TGG | + | chr3.3:72293754-72293773 | MS.gene75521:intron | 20.0% |
| !! | TTTATATAATACTGGGAAAA+TGG | + | chr3.3:72293797-72293816 | MS.gene75521:intron | 20.0% |
| !!! | AAATTTTCCTTTTATTTGCA+GGG | + | chr3.3:72295620-72295639 | MS.gene75521:intron | 20.0% |
| !!! | GTGTGACAATTTTTTTTTAT+TGG | + | chr3.3:72293295-72293314 | MS.gene75521:intron | 20.0% |
| ! | AAAAAAAAATTGTCACACAG+TGG | - | chr3.3:72293293-72293312 | None:intergenic | 25.0% |
| ! | ATCCTTCTATTTCATTATGA+TGG | + | chr3.3:72294280-72294299 | MS.gene75521:CDS | 25.0% |
| ! | ATTAATATGTCTAATTCCAC+TGG | + | chr3.3:72295921-72295940 | MS.gene75521:CDS | 25.0% |
| ! | GTATCATGTCATCATTATTA+AGG | + | chr3.3:72293706-72293725 | MS.gene75521:intron | 25.0% |
| ! | GTGTAATTTATAGCCATATT+AGG | - | chr3.3:72294013-72294032 | None:intergenic | 25.0% |
| ! | TAATATACTTTGAATGTTGG+AGG | - | chr3.3:72295728-72295747 | None:intergenic | 25.0% |
| ! | TACATTGAAGAAAGATATAC+AGG | + | chr3.3:72293598-72293617 | MS.gene75521:CDS | 25.0% |
| ! | TGTAGAGAAACAACAAAATA+AGG | - | chr3.3:72293858-72293877 | None:intergenic | 25.0% |
| ! | TGTATCTTAAGACAGTTTAT+AGG | + | chr3.3:72293987-72294006 | MS.gene75521:intron | 25.0% |
| !! | ACTTTTATTGGAGTAGTTTT+TGG | + | chr3.3:72293370-72293389 | MS.gene75521:CDS | 25.0% |
| !! | TTTTTACTTGATATGTGACT+TGG | + | chr3.3:72295691-72295710 | MS.gene75521:intron | 25.0% |
| !!! | ATAGCAACTCACTTTTAATT+AGG | - | chr3.3:72294463-72294482 | None:intergenic | 25.0% |
| !!! | CAAATTTTCCTTTTATTTGC+AGG | + | chr3.3:72295619-72295638 | MS.gene75521:intron | 25.0% |
| !!! | TTAACTAAGTTGACATTTTC+AGG | + | chr3.3:72294072-72294091 | MS.gene75521:intron | 25.0% |
| !!! | TTAGTGGGAATCTTTTAAAA+CGG | - | chr3.3:72295167-72295186 | None:intergenic | 25.0% |
| !!! | TTTCAGTTTTTTACTTTCTC+CGG | - | chr3.3:72295387-72295406 | None:intergenic | 25.0% |
| AAATCCTCTGTAAACAATGA+AGG | - | chr3.3:72294054-72294073 | None:intergenic | 30.0% | |
| AATAAGCCTCATAATTTCAC+TGG | - | chr3.3:72293344-72293363 | None:intergenic | 30.0% | |
| ACAAGACTAATACATTACAC+CGG | - | chr3.3:72295002-72295021 | None:intergenic | 30.0% | |
| ACCTTTGTTAATGACAATGT+TGG | - | chr3.3:72293418-72293437 | None:intergenic | 30.0% | |
| ATAAGCCTCATAATTTCACT+GGG | - | chr3.3:72293343-72293362 | None:intergenic | 30.0% | |
| ATTTATATGGGATGAAGACT+TGG | + | chr3.3:72294587-72294606 | MS.gene75521:CDS | 30.0% | |
| CATATCAAATACTCACTCTT+CGG | - | chr3.3:72294631-72294650 | None:intergenic | 30.0% | |
| CTTATCAAATGACACATCAA+AGG | + | chr3.3:72293675-72293694 | MS.gene75521:CDS | 30.0% | |
| GAAGAGTGAGTATTTGATAT+GGG | + | chr3.3:72294630-72294649 | MS.gene75521:intron | 30.0% | |
| TAGTTTCTTCTTCCTCTTTA+CGG | + | chr3.3:72293445-72293464 | MS.gene75521:intron | 30.0% | |
| TCCAAAAGTTAATAACACAC+TGG | - | chr3.3:72294389-72294408 | None:intergenic | 30.0% | |
| TCCAACATTGTCATTAACAA+AGG | + | chr3.3:72293414-72293433 | MS.gene75521:CDS | 30.0% | |
| TGATGTTTCAATGTTGTTGA+TGG | + | chr3.3:72295808-72295827 | MS.gene75521:intron | 30.0% | |
| TTGACATAAACTAGCATATG+TGG | - | chr3.3:72293262-72293281 | None:intergenic | 30.0% | |
| TTTATATGGGATGAAGACTT+GGG | + | chr3.3:72294588-72294607 | MS.gene75521:CDS | 30.0% | |
| ! | AGTTTTACCCTGCAAATAAA+AGG | - | chr3.3:72295630-72295649 | None:intergenic | 30.0% |
| ! | CTTATTGTGACGACTTTTAT+TGG | + | chr3.3:72293358-72293377 | MS.gene75521:CDS | 30.0% |
| ! | TGGATGAAAGATTTTCATTG+TGG | + | chr3.3:72294405-72294424 | MS.gene75521:intron | 30.0% |
| ! | TTGGATTTTTGTTAGAGTGA+CGG | + | chr3.3:72294916-72294935 | MS.gene75521:intron | 30.0% |
| !! | ACCAGTGTGTTATTAACTTT+TGG | + | chr3.3:72294385-72294404 | MS.gene75521:intron | 30.0% |
| !! | ACTAAGAAAGACCTTTTTCA+CGG | - | chr3.3:72294170-72294189 | None:intergenic | 30.0% |
| !! | ATTTGAGATTTTACCCTTCT+AGG | + | chr3.3:72294511-72294530 | MS.gene75521:intron | 30.0% |
| !! | GTGTCATTTGATAAGTGATT+TGG | - | chr3.3:72293670-72293689 | None:intergenic | 30.0% |
| !! | TCATTCTTACTTTTACAGCA+TGG | + | chr3.3:72295345-72295364 | MS.gene75521:intron | 30.0% |
| !! | TGTATTAGTCTTGTATTGTC+TGG | + | chr3.3:72295008-72295027 | MS.gene75521:intron | 30.0% |
| !! | TGTTGTTTCTCTACAGATAT+GGG | + | chr3.3:72293863-72293882 | MS.gene75521:intron | 30.0% |
| !! | TTGTTGTTTCTCTACAGATA+TGG | + | chr3.3:72293862-72293881 | MS.gene75521:intron | 30.0% |
| !!! | GCGTTAACTATTGATTTTCT+TGG | + | chr3.3:72294897-72294916 | MS.gene75521:intron | 30.0% |
| !!! | GTAGTTTTTGGTTTCTTTCT+AGG | + | chr3.3:72293382-72293401 | MS.gene75521:CDS | 30.0% |
| AAAAAATTGTCACACAGTGG+TGG | - | chr3.3:72293290-72293309 | None:intergenic | 35.0% | |
| AACTAATCAACAACCTGTGA+AGG | + | chr3.3:72295748-72295767 | MS.gene75521:intron | 35.0% | |
| AATAATCTACTGCAGCACAA+AGG | - | chr3.3:72293475-72293494 | None:intergenic | 35.0% | |
| AATGTAAGAGAGATCAATCG+AGG | - | chr3.3:72293584-72293603 | None:intergenic | 35.0% | |
| AGTGAGTATTTGATATGGGA+AGG | + | chr3.3:72294634-72294653 | MS.gene75521:intron | 35.0% | |
| ATGAATGGGATGAGTTTGAA+TGG | + | chr3.3:72294311-72294330 | MS.gene75521:CDS | 35.0% | |
| ATGTAAGAGAGATCAATCGA+GGG | - | chr3.3:72293583-72293602 | None:intergenic | 35.0% | |
| ATTTACCTGATTTCCTAGTG+TGG | - | chr3.3:72295525-72295544 | None:intergenic | 35.0% | |
| CGAAGAGTGAGTATTTGATA+TGG | + | chr3.3:72294629-72294648 | MS.gene75521:intron | 35.0% | |
| GAAAACCCAGTGAAATTATG+AGG | + | chr3.3:72293335-72293354 | MS.gene75521:CDS | 35.0% | |
| GACAGTTTATAGGCCTAATA+TGG | + | chr3.3:72293997-72294016 | MS.gene75521:intron | 35.0% | |
| GGCCATCATAATGAAATAGA+AGG | - | chr3.3:72294285-72294304 | None:intergenic | 35.0% | |
| TAAGATAAAGACTCCTTCAC+AGG | - | chr3.3:72295764-72295783 | None:intergenic | 35.0% | |
| TGAGTTTGAATGGTCAAAGA+AGG | + | chr3.3:72294321-72294340 | MS.gene75521:CDS | 35.0% | |
| TGGCAAATGACAAAAAGAAG+AGG | + | chr3.3:72294792-72294811 | MS.gene75521:CDS | 35.0% | |
| TGTAAACAATGAAGGTCAGA+AGG | - | chr3.3:72294046-72294065 | None:intergenic | 35.0% | |
| TTAAAACTGGTGAAGAAGCA+TGG | + | chr3.3:72294723-72294742 | MS.gene75521:CDS | 35.0% | |
| TTATAAAAGACCAAGCACGA+CGG | - | chr3.3:72293624-72293643 | None:intergenic | 35.0% | |
| TTTACCTGATTTCCTAGTGT+GGG | - | chr3.3:72295524-72295543 | None:intergenic | 35.0% | |
| TTTATTGGATGCAGTCCTAA+TGG | + | chr3.3:72293310-72293329 | MS.gene75521:intron | 35.0% | |
| ! | ACTTTTACTTGCGTAGATTG+TGG | + | chr3.3:72293946-72293965 | MS.gene75521:CDS | 35.0% |
| ! | CTGGTTTAGAACCCAATAAA+GGG | + | chr3.3:72294763-72294782 | MS.gene75521:CDS | 35.0% |
| ! | CTTTTACTTGCGTAGATTGT+GGG | + | chr3.3:72293947-72293966 | MS.gene75521:CDS | 35.0% |
| ! | GAACATGCATATTTCAAGTC+CGG | + | chr3.3:72295891-72295910 | MS.gene75521:CDS | 35.0% |
| ! | TTTTACTTGCGTAGATTGTG+GGG | + | chr3.3:72293948-72293967 | MS.gene75521:CDS | 35.0% |
| !! | ATGCAGGTTTGTTGAGATTA+TGG | + | chr3.3:72295072-72295091 | MS.gene75521:intron | 35.0% |
| !!! | GGGAATCTTTTAAAACGGTT+AGG | - | chr3.3:72295162-72295181 | None:intergenic | 35.0% |
| AACCCAATAAAGGGTTGACA+TGG | + | chr3.3:72294772-72294791 | MS.gene75521:CDS | 40.0% | |
| ACCTGCACTTGAAATGACAA+AGG | - | chr3.3:72294701-72294720 | None:intergenic | 40.0% | |
| ACTCATCCCATTCATTAGCT+CGG | - | chr3.3:72294306-72294325 | None:intergenic | 40.0% | |
| AGACATATTAATACCACCGC+CGG | - | chr3.3:72295913-72295932 | None:intergenic | 40.0% | |
| ATGCACAATTAGATACAGCC+CGG | - | chr3.3:72295038-72295057 | None:intergenic | 40.0% | |
| ATTATCAGACCTGCGAGTAA+CGG | - | chr3.3:72293197-72293216 | None:intergenic | 40.0% | |
| ATTCTCTGTCACATGAATGC+AGG | + | chr3.3:72295056-72295075 | MS.gene75521:intron | 40.0% | |
| ATTTCTGCATCCTGACATTG+TGG | + | chr3.3:72294548-72294567 | MS.gene75521:CDS | 40.0% | |
| CAAGTGCAGGTACTTAAAAC+TGG | + | chr3.3:72294710-72294729 | MS.gene75521:intron | 40.0% | |
| CAGGCTATATCAGGAAAAAG+TGG | - | chr3.3:72295448-72295467 | None:intergenic | 40.0% | |
| CATTTCATAGCCAACAGTGA+AGG | - | chr3.3:72294128-72294147 | None:intergenic | 40.0% | |
| CTGACCTTCATTGTTTACAG+AGG | + | chr3.3:72294047-72294066 | MS.gene75521:intron | 40.0% | |
| CTTAAGATACACACCTCACT+GGG | - | chr3.3:72293978-72293997 | None:intergenic | 40.0% | |
| GAACCACAAGAAACTGCTAT+GGG | - | chr3.3:72294853-72294872 | None:intergenic | 40.0% | |
| TATTGATGCAGCCGTGAAAA+AGG | + | chr3.3:72294156-72294175 | MS.gene75521:CDS | 40.0% | |
| TCTTAAGATACACACCTCAC+TGG | - | chr3.3:72293979-72293998 | None:intergenic | 40.0% | |
| TCTTGTATTGTCTGGTCTAC+CGG | + | chr3.3:72295016-72295035 | MS.gene75521:intron | 40.0% | |
| TGAACCACAAGAAACTGCTA+TGG | - | chr3.3:72294854-72294873 | None:intergenic | 40.0% | |
| TGCAGTTAGAAGATGTGTTG+AGG | + | chr3.3:72295283-72295302 | MS.gene75521:CDS | 40.0% | |
| TGCCATGTCAACCCTTTATT+GGG | - | chr3.3:72294777-72294796 | None:intergenic | 40.0% | |
| TTGCAGGGTAAAACTGAAAC+CGG | + | chr3.3:72295635-72295654 | MS.gene75521:intron | 40.0% | |
| TTGCCATGTCAACCCTTTAT+TGG | - | chr3.3:72294778-72294797 | None:intergenic | 40.0% | |
| TTGTGTCTGGCATATGATTC+AGG | + | chr3.3:72295123-72295142 | MS.gene75521:CDS | 40.0% | |
| ! | ACCTTTGTCATTTCAAGTGC+AGG | + | chr3.3:72294697-72294716 | MS.gene75521:intron | 40.0% |
| ! | CCTGGTTTAGAACCCAATAA+AGG | + | chr3.3:72294762-72294781 | MS.gene75521:CDS | 40.0% |
| ! | GATTTTTGTTAGAGTGACGG+AGG | + | chr3.3:72294919-72294938 | MS.gene75521:intron | 40.0% |
| ! | TCACTGGGTTTTCTACCATT+AGG | - | chr3.3:72293328-72293347 | None:intergenic | 40.0% |
| ! | TGAGATTTTACCCTTCTAGG+TGG | + | chr3.3:72294514-72294533 | MS.gene75521:intron | 40.0% |
| !! | CCTTTATTGGGTTCTAAACC+AGG | - | chr3.3:72294765-72294784 | None:intergenic | 40.0% |
| !! | GGCATATGATTCAGGTTGAA+TGG | + | chr3.3:72295131-72295150 | MS.gene75521:intron | 40.0% |
| !! | GTTTCAATGTTGTTGATGGC+AGG | + | chr3.3:72295812-72295831 | MS.gene75521:intron | 40.0% |
| ACTCCAATCTTCTCATGTGC+AGG | - | chr3.3:72295467-72295486 | None:intergenic | 45.0% | |
| AGTCCCATAGCAGTTTCTTG+TGG | + | chr3.3:72294847-72294866 | MS.gene75521:intron | 45.0% | |
| AGTGGACCATGTTTCAGAGT+CGG | + | chr3.3:72295856-72295875 | MS.gene75521:CDS | 45.0% | |
| ATGATGGCCGAGCTAATGAA+TGG | + | chr3.3:72294296-72294315 | MS.gene75521:CDS | 45.0% | |
| CAAAATCAAGTCCCCATCCA+TGG | - | chr3.3:72295265-72295284 | None:intergenic | 45.0% | |
| CTTGGCATTGCAGAATGACT+TGG | + | chr3.3:72295238-72295257 | MS.gene75521:intron | 45.0% | |
| CTTGTATTGTCTGGTCTACC+GGG | + | chr3.3:72295017-72295036 | MS.gene75521:intron | 45.0% | |
| GCTTAGCATACCACCTAGAA+GGG | - | chr3.3:72294527-72294546 | None:intergenic | 45.0% | |
| GGTAAACTTTCTGCTCCTCT+TGG | - | chr3.3:72293900-72293919 | None:intergenic | 45.0% | |
| GTGCTCGCAAACAGACTAAA+TGG | + | chr3.3:72294356-72294375 | MS.gene75521:CDS | 45.0% | |
| TACCTTGTGACCTTCACTGT+TGG | + | chr3.3:72294115-72294134 | MS.gene75521:CDS | 45.0% | |
| TAGCCTGCACATGAGAAGAT+TGG | + | chr3.3:72295461-72295480 | MS.gene75521:intron | 45.0% | |
| TCTCATGTGCAGGCTATATC+AGG | - | chr3.3:72295457-72295476 | None:intergenic | 45.0% | |
| TCTGCTCCTCTTGGATTTGA+TGG | - | chr3.3:72293891-72293910 | None:intergenic | 45.0% | |
| TGATGGCCGAGCTAATGAAT+GGG | + | chr3.3:72294297-72294316 | MS.gene75521:CDS | 45.0% | |
| TGCAGGGTAAAACTGAAACC+GGG | + | chr3.3:72295636-72295655 | MS.gene75521:intron | 45.0% | |
| TGGGTTCCATCAAATCCAAG+AGG | + | chr3.3:72293882-72293901 | MS.gene75521:CDS | 45.0% | |
| TGTTCCCACACTAGGAAATC+AGG | + | chr3.3:72295517-72295536 | MS.gene75521:CDS | 45.0% | |
| TTGCAGTTCAATCTCCCATC+TGG | + | chr3.3:72293550-72293569 | MS.gene75521:intron | 45.0% | |
| TTGGAGTTGTCGATGCTCAA+TGG | + | chr3.3:72295480-72295499 | MS.gene75521:CDS | 45.0% | |
| ! | CATGCATATTTCAAGTCCGG+CGG | + | chr3.3:72295894-72295913 | MS.gene75521:CDS | 45.0% |
| ! | GCAGCTTGCACTTTTAGCAT+TGG | - | chr3.3:72293522-72293541 | None:intergenic | 45.0% |
| ! | GTGAAGGTCACAAGGTACTT+TGG | - | chr3.3:72294112-72294131 | None:intergenic | 45.0% |
| !! | AATGACTTGGTCCATGGATG+GGG | + | chr3.3:72295251-72295270 | MS.gene75521:CDS | 45.0% |
| !! | AATGTTGTTGATGGCAGGTG+AGG | + | chr3.3:72295817-72295836 | MS.gene75521:intron | 45.0% |
| !! | AGAATGACTTGGTCCATGGA+TGG | + | chr3.3:72295249-72295268 | MS.gene75521:intron | 45.0% |
| !! | ATGTTGTTGATGGCAGGTGA+GGG | + | chr3.3:72295818-72295837 | MS.gene75521:intron | 45.0% |
| !! | GAATGACTTGGTCCATGGAT+GGG | + | chr3.3:72295250-72295269 | MS.gene75521:intron | 45.0% |
| !! | GCTCAATGGATTGTTCACCA+AGG | + | chr3.3:72295494-72295513 | MS.gene75521:CDS | 45.0% |
| !! | TCATATGGTGCCACAATGTC+AGG | - | chr3.3:72294561-72294580 | None:intergenic | 45.0% |
| !! | TTGCAGAATGACTTGGTCCA+TGG | + | chr3.3:72295245-72295264 | MS.gene75521:intron | 45.0% |
| AACCAGGCTGTGAAATCTCC+AGG | - | chr3.3:72294749-72294768 | None:intergenic | 50.0% | |
| ACAAGGAGGTAAATGGGGGT+CGG | - | chr3.3:72294963-72294982 | None:intergenic | 50.0% | |
| ACGCTGCACAAGGAGGTAAA+TGG | - | chr3.3:72294970-72294989 | None:intergenic | 50.0% | |
| AGCCAACAGTGAAGGTCACA+AGG | - | chr3.3:72294120-72294139 | None:intergenic | 50.0% | |
| CAGTATTCTCGCGAGAAGCA+TGG | + | chr3.3:72295098-72295117 | MS.gene75521:CDS | 50.0% | |
| CATGCTTCTCGCGAGAATAC+TGG | - | chr3.3:72295100-72295119 | None:intergenic | 50.0% | |
| CGACTCAGCTTCAACAATGC+CGG | - | chr3.3:72293925-72293944 | None:intergenic | 50.0% | |
| CGCTGCACAAGGAGGTAAAT+GGG | - | chr3.3:72294969-72294988 | None:intergenic | 50.0% | |
| CGCTTAGCATACCACCTAGA+AGG | - | chr3.3:72294528-72294547 | None:intergenic | 50.0% | |
| CGGCATTGTTGAAGCTGAGT+CGG | + | chr3.3:72293923-72293942 | MS.gene75521:CDS | 50.0% | |
| CTGCACAAGGAGGTAAATGG+GGG | - | chr3.3:72294967-72294986 | None:intergenic | 50.0% | |
| GACTCAGCTTCAACAATGCC+GGG | - | chr3.3:72293924-72293943 | None:intergenic | 50.0% | |
| GCAAAATATACCCCCTGCCA+TGG | - | chr3.3:72295668-72295687 | None:intergenic | 50.0% | |
| GCAGTTACTTACGCTGCACA+AGG | - | chr3.3:72294980-72294999 | None:intergenic | 50.0% | |
| GCTGCACAAGGAGGTAAATG+GGG | - | chr3.3:72294968-72294987 | None:intergenic | 50.0% | |
| GGAGCAGAAAGTTTACCTCC+CGG | + | chr3.3:72293903-72293922 | MS.gene75521:CDS | 50.0% | |
| GTTACTTACGCTGCACAAGG+AGG | - | chr3.3:72294977-72294996 | None:intergenic | 50.0% | |
| TGTGCAGCGTAAGTAACTGC+CGG | + | chr3.3:72294980-72294999 | MS.gene75521:intron | 50.0% | |
| TTACAGCATGGTCCTAGCAG+CGG | + | chr3.3:72295357-72295376 | MS.gene75521:intron | 50.0% | |
| TTCCTAGTGTGGGAACACCT+TGG | - | chr3.3:72295514-72295533 | None:intergenic | 50.0% | |
| ! | CACAAAGGTACGCCGTAAAG+AGG | - | chr3.3:72293460-72293479 | None:intergenic | 50.0% |
| ! | TAGAGTGACGGAGGAGAAAC+CGG | + | chr3.3:72294928-72294947 | MS.gene75521:intron | 50.0% |
| !! | CGCTAACCGACTCTGAAACA+TGG | - | chr3.3:72295865-72295884 | None:intergenic | 50.0% |
| ATCGAGGGAAGCAAGCCAGA+TGG | - | chr3.3:72293568-72293587 | None:intergenic | 55.0% | |
| ATTGTGGGGCAAACCCAGTG+AGG | + | chr3.3:72293962-72293981 | MS.gene75521:CDS | 55.0% | |
| GATATACAGGCCGTCGTGCT+TGG | + | chr3.3:72293611-72293630 | MS.gene75521:CDS | 55.0% | |
| GGGAGAGATGTAGGAAGGAG+TGG | + | chr3.3:72295838-72295857 | MS.gene75521:CDS | 55.0% | |
| GGTGAGGGAGAGATGTAGGA+AGG | + | chr3.3:72295833-72295852 | MS.gene75521:intron | 55.0% | |
| TCAGCTTCAACAATGCCGGG+AGG | - | chr3.3:72293921-72293940 | None:intergenic | 55.0% | |
| TCGAGGGAAGCAAGCCAGAT+GGG | - | chr3.3:72293567-72293586 | None:intergenic | 55.0% | |
| ! | ACTGGTGAAGAAGCATGGCC+TGG | + | chr3.3:72294728-72294747 | MS.gene75521:CDS | 55.0% |
| ! | AGAGTGACGGAGGAGAAACC+GGG | + | chr3.3:72294929-72294948 | MS.gene75521:intron | 55.0% |
| ! | CACCAAGGTGTTCCCACACT+AGG | + | chr3.3:72295509-72295528 | MS.gene75521:CDS | 55.0% |
| ! | GAGAAGCATGGCGTTGTGTC+TGG | + | chr3.3:72295110-72295129 | MS.gene75521:CDS | 55.0% |
| ! | GCATATTTCAAGTCCGGCGG+TGG | + | chr3.3:72295897-72295916 | MS.gene75521:CDS | 55.0% |
| !! | CTGAAACCGGGAAAGCACCA+TGG | + | chr3.3:72295648-72295667 | MS.gene75521:CDS | 55.0% |
| GGCAGGTGAGGGAGAGATGT+AGG | + | chr3.3:72295829-72295848 | MS.gene75521:intron | 60.0% | |
| GGCCTGGAGATTTCACAGCC+TGG | + | chr3.3:72294744-72294763 | MS.gene75521:CDS | 60.0% | |
| TGACGGAGGAGAAACCGGGA+TGG | + | chr3.3:72294933-72294952 | MS.gene75521:CDS | 60.0% | |
| TGGTCCTAGCAGCGGCTTAC+CGG | + | chr3.3:72295365-72295384 | MS.gene75521:intron | 60.0% | |
| TTCTCCGGTAAGCCGCTGCT+AGG | - | chr3.3:72295372-72295391 | None:intergenic | 60.0% | |
| !! | AACCGGGAAAGCACCATGGC+AGG | + | chr3.3:72295652-72295671 | MS.gene75521:CDS | 60.0% |
| !! | ACCGGGAAAGCACCATGGCA+GGG | + | chr3.3:72295653-72295672 | MS.gene75521:CDS | 60.0% |
| CCCCTGCCATGGTGCTTTCC+CGG | - | chr3.3:72295657-72295676 | None:intergenic | 65.0% | |
| TGGGGGTCGGAACACCATCC+CGG | - | chr3.3:72294950-72294969 | None:intergenic | 65.0% | |
| !! | CCGGGAAAGCACCATGGCAG+GGG | + | chr3.3:72295654-72295673 | MS.gene75521:CDS | 65.0% |
| !! | CGGGAAAGCACCATGGCAGG+GGG | + | chr3.3:72295655-72295674 | MS.gene75521:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 72293187 | 72295950 | 72293187 | ID=MS.gene75521 |
| chr3.3 | mRNA | 72293187 | 72295950 | 72293187 | ID=MS.gene75521.t1;Parent=MS.gene75521 |
| chr3.3 | exon | 72293187 | 72293206 | 72293187 | ID=MS.gene75521.t1.exon1;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72293187 | 72293206 | 72293187 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72293324 | 72293435 | 72293324 | ID=MS.gene75521.t1.exon2;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72293324 | 72293435 | 72293324 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72293556 | 72293696 | 72293556 | ID=MS.gene75521.t1.exon3;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72293556 | 72293696 | 72293556 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72293879 | 72293983 | 72293879 | ID=MS.gene75521.t1.exon4;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72293879 | 72293983 | 72293879 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72294094 | 72294177 | 72294094 | ID=MS.gene75521.t1.exon5;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72294094 | 72294177 | 72294094 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72294262 | 72294377 | 72294262 | ID=MS.gene75521.t1.exon6;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72294262 | 72294377 | 72294262 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72294533 | 72294634 | 72294533 | ID=MS.gene75521.t1.exon7;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72294533 | 72294634 | 72294533 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72294719 | 72294832 | 72294719 | ID=MS.gene75521.t1.exon8;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72294719 | 72294832 | 72294719 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72294931 | 72294987 | 72294931 | ID=MS.gene75521.t1.exon9;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72294931 | 72294987 | 72294931 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72295078 | 72295144 | 72295078 | ID=MS.gene75521.t1.exon10;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72295078 | 72295144 | 72295078 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72295251 | 72295304 | 72295251 | ID=MS.gene75521.t1.exon11;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72295251 | 72295304 | 72295251 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72295464 | 72295538 | 72295464 | ID=MS.gene75521.t1.exon12;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72295464 | 72295538 | 72295464 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72295641 | 72295676 | 72295641 | ID=MS.gene75521.t1.exon13;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72295641 | 72295676 | 72295641 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| chr3.3 | exon | 72295834 | 72295950 | 72295834 | ID=MS.gene75521.t1.exon14;Parent=MS.gene75521.t1 |
| chr3.3 | CDS | 72295834 | 72295950 | 72295834 | ID=cds.MS.gene75521.t1;Parent=MS.gene75521.t1 |
| Gene Sequence |
| Protein sequence |
