Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061384.t1 | XP_003621742.1 | 96.9 | 541 | 17 | 0 | 1 | 541 | 1 | 541 | 1.1e-309 | 1071.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061384.t1 | Q9C509 | 79.5 | 541 | 108 | 1 | 1 | 538 | 1 | 541 | 3.4e-257 | 888.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061384.t1 | G7KUR3 | 96.9 | 541 | 17 | 0 | 1 | 541 | 1 | 541 | 8.1e-310 | 1071.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050379 | MS.gene061384 | 0.811104 | 8.27E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene061384 | 0.817495 | 3.20E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene061384 | 0.809791 | 1.59E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene061384 | 0.810642 | 1.04E-50 | -1.69E-46 |
| MS.gene050961 | MS.gene061384 | 0.810776 | 9.74E-51 | -1.69E-46 |
| MS.gene051538 | MS.gene061384 | 0.815989 | 6.97E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene061384 | 0.81016 | 1.32E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene061384 | 0.817346 | 3.46E-52 | -1.69E-46 |
| MS.gene052579 | MS.gene061384 | 0.802771 | 4.79E-49 | -1.69E-46 |
| MS.gene053272 | MS.gene061384 | -0.841006 | 6.17E-58 | -1.69E-46 |
| MS.gene055506 | MS.gene061384 | 0.815141 | 1.08E-51 | -1.69E-46 |
| MS.gene056363 | MS.gene061384 | 0.808258 | 3.38E-50 | -1.69E-46 |
| MS.gene056677 | MS.gene061384 | 0.802788 | 4.75E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene061384 | 0.82731 | 1.68E-54 | -1.69E-46 |
| MS.gene05686 | MS.gene061384 | 0.840767 | 7.13E-58 | -1.69E-46 |
| MS.gene057102 | MS.gene061384 | 0.809279 | 2.05E-50 | -1.69E-46 |
| MS.gene057174 | MS.gene061384 | 0.820568 | 6.40E-53 | -1.69E-46 |
| MS.gene058781 | MS.gene061384 | 0.833502 | 5.14E-56 | -1.69E-46 |
| MS.gene058783 | MS.gene061384 | 0.800698 | 1.28E-48 | -1.69E-46 |
| MS.gene05952 | MS.gene061384 | 0.816767 | 4.67E-52 | -1.69E-46 |
| MS.gene059634 | MS.gene061384 | 0.801297 | 9.62E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene061384 | -0.8385 | 2.77E-57 | -1.69E-46 |
| MS.gene060338 | MS.gene061384 | 0.80211 | 6.55E-49 | -1.69E-46 |
| MS.gene060522 | MS.gene061384 | 0.865849 | 4.38E-65 | -1.69E-46 |
| MS.gene060935 | MS.gene061384 | 0.82208 | 2.87E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene061384 | 0.827486 | 1.52E-54 | -1.69E-46 |
| MS.gene060962 | MS.gene061384 | 0.817561 | 3.09E-52 | -1.69E-46 |
| MS.gene061188 | MS.gene061384 | 0.808443 | 3.09E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061384.t1 | MTR_7g022310 | 96.858 | 541 | 17 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1094 |
| MS.gene061384.t1 | MTR_3g064740 | 25.549 | 364 | 239 | 12 | 157 | 499 | 81 | 433 | 5.79e-23 | 102 |
| MS.gene061384.t1 | MTR_5g077090 | 25.000 | 360 | 246 | 10 | 157 | 499 | 72 | 424 | 1.42e-22 | 101 |
| MS.gene061384.t1 | MTR_3g064740 | 26.453 | 344 | 221 | 12 | 177 | 499 | 6 | 338 | 3.31e-22 | 99.4 |
| MS.gene061384.t1 | MTR_6g075210 | 26.099 | 364 | 237 | 11 | 157 | 499 | 84 | 436 | 1.40e-19 | 92.4 |
| MS.gene061384.t1 | MTR_6g075210 | 27.241 | 290 | 193 | 7 | 222 | 499 | 20 | 303 | 4.43e-18 | 86.7 |
| MS.gene061384.t1 | MTR_6g075210 | 28.631 | 241 | 155 | 6 | 270 | 499 | 10 | 244 | 1.89e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061384.t1 | AT1G27980 | 79.482 | 541 | 108 | 1 | 1 | 538 | 1 | 541 | 0.0 | 879 |
| MS.gene061384.t1 | AT5G17330 | 26.111 | 360 | 242 | 10 | 157 | 499 | 81 | 433 | 5.82e-25 | 108 |
| MS.gene061384.t1 | AT3G17760 | 27.198 | 364 | 233 | 12 | 159 | 501 | 82 | 434 | 1.89e-24 | 107 |
| MS.gene061384.t1 | AT3G17760 | 27.198 | 364 | 233 | 12 | 159 | 501 | 82 | 434 | 1.89e-24 | 107 |
| MS.gene061384.t1 | AT1G65960 | 25.000 | 408 | 273 | 13 | 157 | 539 | 80 | 479 | 5.28e-23 | 102 |
| MS.gene061384.t1 | AT1G65960 | 26.036 | 338 | 223 | 10 | 222 | 539 | 20 | 350 | 8.23e-21 | 94.7 |
| MS.gene061384.t1 | AT1G65960 | 26.036 | 338 | 223 | 10 | 222 | 539 | 20 | 350 | 8.23e-21 | 94.7 |
| MS.gene061384.t1 | AT1G65960 | 26.036 | 338 | 223 | 10 | 222 | 539 | 20 | 350 | 8.23e-21 | 94.7 |
| MS.gene061384.t1 | AT2G02000 | 25.070 | 359 | 247 | 9 | 157 | 499 | 81 | 433 | 3.91e-20 | 94.0 |
| MS.gene061384.t1 | AT2G02010 | 25.556 | 360 | 244 | 10 | 157 | 499 | 81 | 433 | 1.10e-19 | 92.4 |
| MS.gene061384.t1 | AT2G02010 | 25.698 | 358 | 242 | 10 | 159 | 499 | 135 | 485 | 1.74e-19 | 92.4 |
Find 137 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACTTTCTAAGGGATTTAA+AGG | 0.202629 | 7.1:-76556800 | MS.gene061384:CDS |
| AATCAGATGGTAAATCTAAA+AGG | 0.224791 | 7.1:-76563164 | MS.gene061384:CDS |
| TCAGTGGATGTGCATAAATA+TGG | 0.239511 | 7.1:-76559971 | MS.gene061384:CDS |
| GGAAAATACAAAAGCAATTA+TGG | 0.264522 | 7.1:-76557222 | MS.gene061384:CDS |
| TTATTAGTGCCATACATTTC+AGG | 0.273871 | 7.1:+76561151 | None:intergenic |
| ACTTCACCTTTCTGATTTCA+TGG | 0.279730 | 7.1:+76559909 | None:intergenic |
| CATTCATTATACAGGTTACT+TGG | 0.296590 | 7.1:-76557243 | MS.gene061384:intron |
| TTTGGAGTTATTCATGATAA+AGG | 0.311735 | 7.1:-76564616 | MS.gene061384:CDS |
| CAGTTATTGAGGACTTTCTA+AGG | 0.314136 | 7.1:-76556810 | MS.gene061384:CDS |
| TAAAACAACACTTGTTCCTT+TGG | 0.317168 | 7.1:+76559940 | None:intergenic |
| GGTGCTAGTCCTCCAGTTAC+TGG | 0.317254 | 7.1:+76555688 | None:intergenic |
| GATATGACAATTGTGGCTTT+TGG | 0.319388 | 7.1:-76557058 | MS.gene061384:CDS |
| ATTGAAGAAACTTACTTTGA+TGG | 0.327875 | 7.1:+76560729 | None:intergenic |
| TCCTGGACCATTCCTCTATC+TGG | 0.330541 | 7.1:+76555640 | None:intergenic |
| CAGTTAGTTGGATCTTCTCC+TGG | 0.331063 | 7.1:-76560775 | MS.gene061384:CDS |
| CATGTGGACCTTTGCCTTGG+TGG | 0.352680 | 7.1:-76560579 | MS.gene061384:CDS |
| GAAAATCCTGGTCCAGTAAC+TGG | 0.353707 | 7.1:-76555700 | MS.gene061384:CDS |
| GCAATGACAGCGGCACTTCT+TGG | 0.354449 | 7.1:-76561298 | MS.gene061384:CDS |
| CTTAGAAAGTCCTCAATAAC+TGG | 0.360250 | 7.1:+76556811 | None:intergenic |
| GCACCAGCAATAAGGCTTCC+AGG | 0.364217 | 7.1:+76557435 | None:intergenic |
| CTGCCCATGCACCAGCAATA+AGG | 0.367297 | 7.1:+76557427 | None:intergenic |
| AAAAGCCACAATTGTCATAT+CGG | 0.368290 | 7.1:+76557060 | None:intergenic |
| TCTTCTCCTGGGTTTCCTCA+TGG | 0.376026 | 7.1:-76560763 | MS.gene061384:CDS |
| CAATTTCTTCTGTAGGAACT+TGG | 0.377488 | 7.1:-76560633 | MS.gene061384:intron |
| AAAACAACACTTGTTCCTTT+GGG | 0.380643 | 7.1:+76559941 | None:intergenic |
| CCAGAGTGTTGTGCGCTTTG+AGG | 0.387309 | 7.1:-76561332 | MS.gene061384:CDS |
| AGTAAAATCATAAGGTTGAA+TGG | 0.392890 | 7.1:+76560015 | None:intergenic |
| CTACAGCATCAATTCGTTGC+AGG | 0.394221 | 7.1:-76557701 | MS.gene061384:intron |
| TCCAGGTCTGCTTCCAGCTA+TGG | 0.397299 | 7.1:+76557452 | None:intergenic |
| GTAAAATCATAAGGTTGAAT+GGG | 0.403589 | 7.1:+76560016 | None:intergenic |
| TAAAATCGACCAACAATTCC+TGG | 0.404074 | 7.1:+76555623 | None:intergenic |
| GAGTTGCCAAGCATGGGGTT+GGG | 0.404828 | 7.1:-76563126 | MS.gene061384:CDS |
| CATTTGATAATGCAGTTAGT+TGG | 0.408051 | 7.1:-76560787 | MS.gene061384:intron |
| TGCATTCAAATGCCAACCTT+TGG | 0.408261 | 7.1:+76556991 | None:intergenic |
| ACATACCAATCCCTTGCATT+TGG | 0.408812 | 7.1:-76561362 | MS.gene061384:CDS |
| GGAGGACTAGCACCTATATA+TGG | 0.414884 | 7.1:-76555679 | MS.gene061384:CDS |
| TTGAAGAAACTTACTTTGAT+GGG | 0.414924 | 7.1:+76560730 | None:intergenic |
| CTTCTCCTGGGTTTCCTCAT+GGG | 0.417787 | 7.1:-76560762 | MS.gene061384:CDS |
| AGAAAAGAAATGATGCAGTT+TGG | 0.420327 | 7.1:-76563074 | MS.gene061384:CDS |
| ATTCCCGAGTTGTTTATCAT+TGG | 0.434818 | 7.1:-76557088 | MS.gene061384:CDS |
| GAAGCCTTATTGCTGGTGCA+TGG | 0.443699 | 7.1:-76557431 | MS.gene061384:CDS |
| ATTCCCCAGTCCAACCTGTT+GGG | 0.447758 | 7.1:+76556959 | None:intergenic |
| TTCCATGTGGACCTTTGCCT+TGG | 0.452562 | 7.1:-76560582 | MS.gene061384:CDS |
| TATGTATCTCCAACCATAGC+TGG | 0.457040 | 7.1:-76557465 | MS.gene061384:CDS |
| AGTTGCCAAGCATGGGGTTG+GGG | 0.457733 | 7.1:-76563125 | MS.gene061384:CDS |
| AGACCTGGAAGCCTTATTGC+TGG | 0.458765 | 7.1:-76557438 | MS.gene061384:CDS |
| TTCCCAGCGGCACCATATAT+AGG | 0.459272 | 7.1:+76555667 | None:intergenic |
| TATAGGATAATTCCTGAGTC+TGG | 0.461091 | 7.1:-76561065 | MS.gene061384:intron |
| ATCAGATGGTAAATCTAAAA+GGG | 0.464253 | 7.1:-76563163 | MS.gene061384:CDS |
| GCACCTATATATGGTGCCGC+TGG | 0.468031 | 7.1:-76555670 | MS.gene061384:CDS |
| TGAGTAACTTCATACCATAA+TGG | 0.468667 | 7.1:+76560926 | None:intergenic |
| CCTTTAACAGTAAAATCATA+AGG | 0.471720 | 7.1:+76560007 | None:intergenic |
| GGCAGTAAAGAAAAGACATC+TGG | 0.474903 | 7.1:-76561277 | MS.gene061384:CDS |
| ACCATAGCTGGAAGCAGACC+TGG | 0.488785 | 7.1:-76557453 | MS.gene061384:CDS |
| AGGAATGGTCCAGGAATTGT+TGG | 0.489274 | 7.1:-76555632 | MS.gene061384:CDS |
| TTTATTTCTTGCAGTTACAT+TGG | 0.490125 | 7.1:-76562886 | MS.gene061384:intron |
| AGAGTTGCCAAGCATGGGGT+TGG | 0.490326 | 7.1:-76563127 | MS.gene061384:CDS |
| CAGATTGATCCCTGGTGTGA+AGG | 0.491686 | 7.1:-76564394 | MS.gene061384:CDS |
| AAGACAGAGTTGCCAAGCAT+GGG | 0.494853 | 7.1:-76563132 | MS.gene061384:CDS |
| TGGGCAGCAATGATATCTCT+AGG | 0.498237 | 7.1:-76557411 | MS.gene061384:CDS |
| ATTTCTTGCAGTTACATTGG+AGG | 0.498427 | 7.1:-76562883 | MS.gene061384:intron |
| GATGTCCCCAACCCCATGCT+TGG | 0.499973 | 7.1:+76563120 | None:intergenic |
| TACCCAAGCTCACGAGCAAA+AGG | 0.500827 | 7.1:+76560546 | None:intergenic |
| TACATCCAAATGCAAGGGAT+TGG | 0.501298 | 7.1:+76561357 | None:intergenic |
| GTCACAGTTACTGAGTGGTC+TGG | 0.503646 | 7.1:-76557495 | MS.gene061384:intron |
| ATGCATTGCAGAGACCCAAC+AGG | 0.507957 | 7.1:-76556973 | MS.gene061384:intron |
| AAAGCCACAATTGTCATATC+GGG | 0.510282 | 7.1:+76557061 | None:intergenic |
| TTCTCTGGTTCTCGCAAACG+CGG | 0.511148 | 7.1:-76564650 | MS.gene061384:CDS |
| GCTGTAATGTCACACAGATA+TGG | 0.511194 | 7.1:+76556839 | None:intergenic |
| CCTCAAAGCGCACAACACTC+TGG | 0.516402 | 7.1:+76561332 | None:intergenic |
| ACAGCATGTACCAGTTATTG+AGG | 0.517336 | 7.1:-76556821 | MS.gene061384:CDS |
| AGTTAGTTGGATCTTCTCCT+GGG | 0.517683 | 7.1:-76560774 | MS.gene061384:CDS |
| TACATTGGAGGAGATGAGTC+TGG | 0.518337 | 7.1:-76562871 | MS.gene061384:CDS |
| GGTCAACTAGCATCAAACTT+TGG | 0.523108 | 7.1:-76560612 | MS.gene061384:CDS |
| GTAAATCTAAAAGGGATGGT+TGG | 0.524550 | 7.1:-76563155 | MS.gene061384:CDS |
| TCTATATAACCCTTCACACC+AGG | 0.526561 | 7.1:+76564384 | None:intergenic |
| AAGCCTTATTGCTGGTGCAT+GGG | 0.527886 | 7.1:-76557430 | MS.gene061384:CDS |
| GTTTGGCAAGGCAAATGCTC+TGG | 0.531950 | 7.1:-76563057 | MS.gene061384:CDS |
| ATGATATCTCTAGGGAAAGA+AGG | 0.534425 | 7.1:-76557402 | MS.gene061384:intron |
| GACTATATGAAATCCAAGAA+AGG | 0.535174 | 7.1:-76561184 | MS.gene061384:CDS |
| AGTTATTGAGGACTTTCTAA+GGG | 0.535615 | 7.1:-76556809 | MS.gene061384:CDS |
| ATATGTGGCAACATGACATC+AGG | 0.537825 | 7.1:-76561247 | MS.gene061384:CDS |
| AGATTGATCCCTGGTGTGAA+GGG | 0.540818 | 7.1:-76564393 | MS.gene061384:CDS |
| GGTCTGCTTCCAGCTATGGT+TGG | 0.541023 | 7.1:+76557456 | None:intergenic |
| GCTGGGAAGATGCCAGATAG+AGG | 0.551836 | 7.1:-76555652 | MS.gene061384:CDS |
| GAAGACAGAGTTGCCAAGCA+TGG | 0.552651 | 7.1:-76563133 | MS.gene061384:CDS |
| CACCTATATATGGTGCCGCT+GGG | 0.554355 | 7.1:-76555669 | MS.gene061384:CDS |
| GGAACAAGAAGAAGAGTGAG+AGG | 0.555347 | 7.1:+76564679 | None:intergenic |
| CAGTTACTGAGTGGTCTGGT+GGG | 0.562225 | 7.1:-76557491 | MS.gene061384:CDS |
| AGGGGTTACTTCAATATCAG+TGG | 0.564171 | 7.1:-76559987 | MS.gene061384:CDS |
| ATATCATGTCATCCAAAGGT+TGG | 0.567247 | 7.1:-76557003 | MS.gene061384:CDS |
| GCCAGATAGAGGAATGGTCC+AGG | 0.569654 | 7.1:-76555641 | MS.gene061384:CDS |
| TTTCAGGTGAAAGAAAATCC+TGG | 0.572066 | 7.1:-76555712 | MS.gene061384:intron |
| TGAAGAAACTTACTTTGATG+GGG | 0.572772 | 7.1:+76560731 | None:intergenic |
| ACAGTTACTGAGTGGTCTGG+TGG | 0.573589 | 7.1:-76557492 | MS.gene061384:intron |
| AGTCCTCCAGTTACTGGACC+AGG | 0.575202 | 7.1:+76555694 | None:intergenic |
| GTGGATAAGTTACAATCAGA+TGG | 0.575268 | 7.1:-76563177 | MS.gene061384:CDS |
| CTGGAATACATCCAAATGCA+AGG | 0.579196 | 7.1:+76561351 | None:intergenic |
| CCTCATTTATGACAGAAAAG+TGG | 0.579655 | 7.1:+76562845 | None:intergenic |
| AGAAATGATGCAGTTTGGCA+AGG | 0.581484 | 7.1:-76563069 | MS.gene061384:CDS |
| GATGGTAAATCTAAAAGGGA+TGG | 0.583932 | 7.1:-76563159 | MS.gene061384:CDS |
| TAGAAACCATGAAATCAGAA+AGG | 0.584372 | 7.1:-76559915 | MS.gene061384:intron |
| CTTTGGCATTTGTTTCCATG+TGG | 0.588327 | 7.1:-76560595 | MS.gene061384:CDS |
| CAGTGGATGTGCATAAATAT+GGG | 0.593412 | 7.1:-76559970 | MS.gene061384:CDS |
| ATACAAAGCCACCAAGGCAA+AGG | 0.594290 | 7.1:+76560571 | None:intergenic |
| TATGCTGAGTGACCAGACTC+AGG | 0.595937 | 7.1:+76561053 | None:intergenic |
| AATACAAAAGCAATTATGGA+AGG | 0.596677 | 7.1:-76557218 | MS.gene061384:CDS |
| TGTGCGCTTTGAGGCAGAAG+TGG | 0.603379 | 7.1:-76561323 | MS.gene061384:CDS |
| AAGACCCGATATGACAATTG+TGG | 0.605703 | 7.1:-76557065 | MS.gene061384:CDS |
| TCTTCCAATGATAAACAACT+CGG | 0.605917 | 7.1:+76557084 | None:intergenic |
| CACCAAGGCAAAGGTCCACA+TGG | 0.607122 | 7.1:+76560580 | None:intergenic |
| TTGAGAGAGAAACGAATTCG+CGG | 0.616888 | 7.1:+76564708 | None:intergenic |
| ACATCTGGAGGACAAATATG+TGG | 0.618907 | 7.1:-76561262 | MS.gene061384:CDS |
| TGGAATACATCCAAATGCAA+GGG | 0.618914 | 7.1:+76561352 | None:intergenic |
| AAATATGGGTTGGCTCCCAA+AGG | 0.620427 | 7.1:-76559956 | MS.gene061384:CDS |
| AATGATATCATGTCATCCAA+AGG | 0.624476 | 7.1:-76557007 | MS.gene061384:CDS |
| GGGCAGCAATGATATCTCTA+GGG | 0.626064 | 7.1:-76557410 | MS.gene061384:CDS |
| TGTGGCAACATGACATCAGG+AGG | 0.628292 | 7.1:-76561244 | MS.gene061384:CDS |
| ATTATCCCATGAGGAAACCC+AGG | 0.633375 | 7.1:+76560757 | None:intergenic |
| CTTCCAATGATAAACAACTC+GGG | 0.639128 | 7.1:+76557085 | None:intergenic |
| AGTAAAGAAAAGACATCTGG+AGG | 0.643748 | 7.1:-76561274 | MS.gene061384:CDS |
| TAAAATCATAAGGTTGAATG+GGG | 0.646928 | 7.1:+76560017 | None:intergenic |
| TTATGTTATATGCAGCATAG+AGG | 0.650106 | 7.1:-76557113 | MS.gene061384:intron |
| CATTTGTCACAGTTACTGAG+TGG | 0.652868 | 7.1:-76557500 | MS.gene061384:intron |
| AGACAGAGTTGCCAAGCATG+GGG | 0.662640 | 7.1:-76563131 | MS.gene061384:CDS |
| GAAGATGCCAGATAGAGGAA+TGG | 0.662743 | 7.1:-76555647 | MS.gene061384:CDS |
| GGATGTGCATAAATATGGGT+TGG | 0.663951 | 7.1:-76559966 | MS.gene061384:CDS |
| ATGGGGTCTATTATCCCATG+AGG | 0.669772 | 7.1:+76560748 | None:intergenic |
| AAGGTAATACAAAGCCACCA+AGG | 0.679082 | 7.1:+76560565 | None:intergenic |
| CTATATAACCCTTCACACCA+GGG | 0.682886 | 7.1:+76564385 | None:intergenic |
| ATTGGAGGAGATGAGTCTGG+TGG | 0.704181 | 7.1:-76562868 | MS.gene061384:CDS |
| AGAAGTGGTTGCAATGACAG+CGG | 0.708284 | 7.1:-76561308 | MS.gene061384:CDS |
| AATCCTGGTCCAGTAACTGG+AGG | 0.711704 | 7.1:-76555697 | MS.gene061384:CDS |
| GTGGCAACATGACATCAGGA+GGG | 0.719581 | 7.1:-76561243 | MS.gene061384:CDS |
| GCGAGAACCAGAGAAAACAG+AGG | 0.720700 | 7.1:+76564658 | None:intergenic |
| AGAGAGAAACGAATTCGCGG+TGG | 0.726132 | 7.1:+76564711 | None:intergenic |
| TCTATCTGGCATCTTCCCAG+CGG | 0.735851 | 7.1:+76555654 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 76555606 | 76564776 | 76555606 | ID=MS.gene061384 |
| chr7.1 | mRNA | 76555606 | 76564776 | 76555606 | ID=MS.gene061384.t1;Parent=MS.gene061384 |
| chr7.1 | exon | 76564574 | 76564776 | 76564574 | ID=MS.gene061384.t1.exon1;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76564574 | 76564776 | 76564574 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76564368 | 76564413 | 76564368 | ID=MS.gene061384.t1.exon2;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76564368 | 76564413 | 76564368 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76563051 | 76563202 | 76563051 | ID=MS.gene061384.t1.exon3;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76563051 | 76563202 | 76563051 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76562835 | 76562894 | 76562835 | ID=MS.gene061384.t1.exon4;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76562835 | 76562894 | 76562835 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76561166 | 76561390 | 76561166 | ID=MS.gene061384.t1.exon5;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76561166 | 76561390 | 76561166 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76560941 | 76561082 | 76560941 | ID=MS.gene061384.t1.exon6;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76560941 | 76561082 | 76560941 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76560744 | 76560794 | 76560744 | ID=MS.gene061384.t1.exon7;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76560744 | 76560794 | 76560744 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76560549 | 76560640 | 76560549 | ID=MS.gene061384.t1.exon8;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76560549 | 76560640 | 76560549 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76559916 | 76560042 | 76559916 | ID=MS.gene061384.t1.exon9;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76559916 | 76560042 | 76559916 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76557702 | 76557717 | 76557702 | ID=MS.gene061384.t1.exon10;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76557702 | 76557717 | 76557702 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76557403 | 76557510 | 76557403 | ID=MS.gene061384.t1.exon11;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76557403 | 76557510 | 76557403 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76557197 | 76557251 | 76557197 | ID=MS.gene061384.t1.exon12;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76557197 | 76557251 | 76557197 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76556974 | 76557120 | 76556974 | ID=MS.gene061384.t1.exon13;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76556974 | 76557120 | 76556974 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76556786 | 76556864 | 76556786 | ID=MS.gene061384.t1.exon14;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76556786 | 76556864 | 76556786 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| chr7.1 | exon | 76555606 | 76555728 | 76555606 | ID=MS.gene061384.t1.exon15;Parent=MS.gene061384.t1 |
| chr7.1 | CDS | 76555606 | 76555728 | 76555606 | ID=cds.MS.gene061384.t1;Parent=MS.gene061384.t1 |
| Gene Sequence |
| Protein sequence |
