AlfalfaGEDB | MS.gene060338

M. sativa cultivar XinJiangDaYe / MS.gene060338

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060338.t1	XP_003609432.1	95.8	95	4	0	1	95	412	506	3.90E-43	183.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060338.t1	Q9ASQ5	62.5	88	33	0	1	88	421	508	7.5e-27	120.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060338.t1	G7JFF3	95.8	95	4	0	1	95	412	506	2.8e-43	183.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049680	MS.gene060338	0.804549	2.05E-49	-1.69E-46
MS.gene051019	MS.gene060338	0.819068	1.41E-52	-1.69E-46
MS.gene051637	MS.gene060338	0.811458	6.93E-51	-1.69E-46
MS.gene055150	MS.gene060338	0.800963	1.13E-48	-1.69E-46
MS.gene057102	MS.gene060338	0.835458	1.66E-56	-1.69E-46
MS.gene058095	MS.gene060338	0.800031	1.74E-48	-1.69E-46
MS.gene05985	MS.gene060338	-0.836444	9.32E-57	-1.69E-46
MS.gene059900	MS.gene060338	-0.810888	9.22E-51	-1.69E-46
MS.gene060338	MS.gene060522	0.81054	1.10E-50	-1.69E-46
MS.gene060338	MS.gene060906	0.800604	1.33E-48	-1.69E-46
MS.gene060338	MS.gene060935	0.806472	8.09E-50	-1.69E-46
MS.gene060338	MS.gene060937	0.813947	1.98E-51	-1.69E-46
MS.gene060338	MS.gene061188	0.808761	2.64E-50	-1.69E-46
MS.gene060338	MS.gene061384	0.80211	6.55E-49	-1.69E-46
MS.gene060338	MS.gene061782	0.814054	1.87E-51	-1.69E-46
MS.gene060338	MS.gene063143	0.808445	3.09E-50	-1.69E-46
MS.gene060338	MS.gene065069	0.802215	6.24E-49	-1.69E-46
MS.gene060338	MS.gene065510	0.826275	2.97E-54	-1.69E-46
MS.gene060338	MS.gene066513	0.803214	3.88E-49	-1.69E-46
MS.gene060338	MS.gene067087	0.810314	1.23E-50	-1.69E-46
MS.gene060338	MS.gene067785	0.828788	7.40E-55	-1.69E-46
MS.gene060338	MS.gene070025	0.808648	2.79E-50	-1.69E-46
MS.gene060338	MS.gene073500	0.805459	1.32E-49	-1.69E-46
MS.gene060338	MS.gene073556	0.801982	6.96E-49	-1.69E-46
MS.gene060338	MS.gene08461	0.829315	5.52E-55	-1.69E-46
MS.gene060338	MS.gene20919	-0.818248	2.16E-52	-1.69E-46
MS.gene060338	MS.gene21536	0.802434	5.62E-49	-1.69E-46
MS.gene060338	MS.gene21776	0.808408	3.14E-50	-1.69E-46
MS.gene060338	MS.gene21853	0.813172	2.93E-51	-1.69E-46
MS.gene060338	MS.gene24408	0.842756	2.13E-58	-1.69E-46
MS.gene060338	MS.gene25991	0.815583	8.58E-52	-1.69E-46
MS.gene060338	MS.gene26513	-0.805041	1.62E-49	-1.69E-46
MS.gene060338	MS.gene26573	0.822783	1.97E-53	-1.69E-46
MS.gene060338	MS.gene28918	0.842973	1.86E-58	-1.69E-46
MS.gene060338	MS.gene29036	0.805207	1.49E-49	-1.69E-46
MS.gene060338	MS.gene29631	0.80258	5.24E-49	-1.69E-46
MS.gene060338	MS.gene32145	0.802189	6.31E-49	-1.69E-46
MS.gene060338	MS.gene32801	0.808193	3.49E-50	-1.69E-46
MS.gene060338	MS.gene32893	0.821074	4.90E-53	-1.69E-46
MS.gene060338	MS.gene32965	0.814144	1.79E-51	-1.69E-46
MS.gene060338	MS.gene33650	0.802313	5.95E-49	-1.69E-46
MS.gene060338	MS.gene34078	0.80233	5.90E-49	-1.69E-46
MS.gene060338	MS.gene35858	0.805776	1.13E-49	-1.69E-46
MS.gene060338	MS.gene37090	0.812646	3.82E-51	-1.69E-46
MS.gene060338	MS.gene38207	0.809512	1.82E-50	-1.69E-46
MS.gene060338	MS.gene38759	0.826024	3.40E-54	-1.69E-46
MS.gene060338	MS.gene39037	0.815059	1.12E-51	-1.69E-46
MS.gene060338	MS.gene39698	0.832844	7.50E-56	-1.69E-46
MS.gene060338	MS.gene39835	-0.819396	1.19E-52	-1.69E-46
MS.gene060338	MS.gene40799	0.831111	2.01E-55	-1.69E-46
MS.gene060338	MS.gene41704	0.826729	2.31E-54	-1.69E-46
MS.gene060338	MS.gene44179	0.827864	1.24E-54	-1.69E-46
MS.gene060338	MS.gene46055	0.815274	1.01E-51	-1.69E-46
MS.gene060338	MS.gene47276	0.815249	1.02E-51	-1.69E-46
MS.gene060338	MS.gene48037	0.835495	1.62E-56	-1.69E-46
MS.gene060338	MS.gene50520	0.814427	1.55E-51	-1.69E-46
MS.gene060338	MS.gene51454	0.819237	1.29E-52	-1.69E-46
MS.gene060338	MS.gene51894	0.828495	8.71E-55	-1.69E-46
MS.gene060338	MS.gene51935	0.82247	2.33E-53	-1.69E-46
MS.gene060338	MS.gene52849	0.823878	1.09E-53	-1.69E-46
MS.gene060338	MS.gene52994	0.803706	3.07E-49	-1.69E-46
MS.gene060338	MS.gene54704	0.812131	4.95E-51	-1.69E-46
MS.gene060338	MS.gene55785	-0.818653	1.75E-52	-1.69E-46
MS.gene060338	MS.gene57343	0.816037	6.80E-52	-1.69E-46
MS.gene060338	MS.gene58063	0.947253	9.64E-106	-1.69E-46
MS.gene060338	MS.gene58081	0.83477	2.47E-56	-1.69E-46
MS.gene060338	MS.gene58342	0.835524	1.60E-56	-1.69E-46
MS.gene060338	MS.gene61516	0.813017	3.17E-51	-1.69E-46
MS.gene060338	MS.gene62387	0.804809	1.81E-49	-1.69E-46
MS.gene060338	MS.gene62676	0.831735	1.41E-55	-1.69E-46
MS.gene060338	MS.gene62677	0.848511	5.85E-60	-1.69E-46
MS.gene060338	MS.gene67131	0.850119	2.09E-60	-1.69E-46
MS.gene060338	MS.gene68198	0.829689	4.47E-55	-1.69E-46
MS.gene060338	MS.gene69734	-0.810608	1.06E-50	-1.69E-46
MS.gene060338	MS.gene70656	0.822549	2.23E-53	-1.69E-46
MS.gene060338	MS.gene71891	-0.859503	3.96E-63	-1.69E-46
MS.gene060338	MS.gene71945	0.826262	2.99E-54	-1.69E-46
MS.gene060338	MS.gene73644	0.811239	7.73E-51	-1.69E-46
MS.gene060338	MS.gene73783	-0.809149	2.18E-50	-1.69E-46
MS.gene060338	MS.gene73883	0.849102	4.01E-60	-1.69E-46
MS.gene060338	MS.gene73885	0.851739	7.29E-61	-1.69E-46
MS.gene060338	MS.gene74537	0.820209	7.74E-53	-1.69E-46
MS.gene060338	MS.gene74604	0.815093	1.10E-51	-1.69E-46
MS.gene060338	MS.gene75344	0.811579	6.52E-51	-1.69E-46
MS.gene060338	MS.gene75521	0.816403	5.63E-52	-1.69E-46
MS.gene060338	MS.gene76244	0.809883	1.52E-50	-1.69E-46
MS.gene060338	MS.gene76884	0.802251	6.13E-49	-1.69E-46
MS.gene060338	MS.gene80729	0.811624	6.38E-51	-1.69E-46
MS.gene060338	MS.gene83172	0.801302	9.60E-49	-1.69E-46
MS.gene060338	MS.gene83864	0.844462	7.45E-59	-1.69E-46
MS.gene060338	MS.gene84733	0.811036	8.56E-51	-1.69E-46
MS.gene060338	MS.gene84734	0.822059	2.90E-53	-1.69E-46
MS.gene060338	MS.gene84866	0.812802	3.53E-51	-1.69E-46
MS.gene060338	MS.gene84967	0.809309	2.02E-50	-1.69E-46
MS.gene060338	MS.gene88373	-0.808896	2.47E-50	-1.69E-46
MS.gene060338	MS.gene89256	0.83073	2.49E-55	-1.69E-46
MS.gene060338	MS.gene92348	0.819297	1.25E-52	-1.69E-46
MS.gene060338	MS.gene94266	0.837166	6.10E-57	-1.69E-46
MS.gene060338	MS.gene95614	0.802875	4.56E-49	-1.69E-46
MS.gene060338	MS.gene98636	0.828025	1.13E-54	-1.69E-46
MS.gene060338	MS.gene99431	0.809388	1.94E-50	-1.69E-46
MS.gene060338	MS.gene99894	0.813738	2.20E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 19 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTACAGCTTCTTGCATTAA+AGG	0.122689	8.3:+10848978	None:intergenic
GTGAGCAATTGTGGGCAATA+AGG	0.360166	8.3:-10848869	MS.gene060338:CDS
CTTAATGTAACTCGCTCTTC+AGG	0.364661	8.3:+10850151	None:intergenic
TCAGGTCTATCTGATCTTAC+TGG	0.367030	8.3:+10848906	None:intergenic
TGCTGTGAAGATGTTTGATT+TGG	0.399908	8.3:-10848946	MS.gene060338:CDS
TGAGCAATTGTGGGCAATAA+GGG	0.419425	8.3:-10848868	MS.gene060338:CDS
TCCTTCATTATATTTCCTGA+AGG	0.511707	8.3:+10849022	None:intergenic
AAGAGCGAGTTACATTAAGA+TGG	0.522640	8.3:-10850147	MS.gene060338:CDS
AAACAGTGGGTGAGCAATTG+TGG	0.527503	8.3:-10848878	MS.gene060338:CDS
GAAATATAATGAAGGAAATG+TGG	0.548375	8.3:-10849015	MS.gene060338:CDS
CAGTTGTGCTACTACTCTTG+AGG	0.565502	8.3:+10848838	None:intergenic
TCTGACTGGCCGTCGCCCTG+TGG	0.576329	8.3:-10850188	MS.gene060338:CDS
AACAGTGGGTGAGCAATTGT+GGG	0.589188	8.3:-10848877	MS.gene060338:CDS
GCCTTCAGGAAATATAATGA+AGG	0.589672	8.3:-10849023	MS.gene060338:CDS
ATATAATGAAGGAAATGTGG+TGG	0.592211	8.3:-10849012	MS.gene060338:CDS
AGAGCGAGTTACATTAAGAT+GGG	0.606183	8.3:-10850146	MS.gene060338:intron
AGAGTAGTAGCACAACTGCA+AGG	0.643008	8.3:-10848833	MS.gene060338:CDS
AGACCTGACATGAAAACAGT+GGG	0.650314	8.3:-10848891	MS.gene060338:CDS
TAGACCTGACATGAAAACAG+TGG	0.699696	8.3:-10848892	MS.gene060338:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATAATATAATTTAATAGGC+TGG	-	chr8.3:10848980-10848999	MS.gene060338:CDS	15.0%
!!	AGAAATTATTCTTAACTTAG+AGG	+	chr8.3:10849075-10849094	None:intergenic	20.0%
!!	TTGTTACTATCCTAAAATTT+GGG	-	chr8.3:10849420-10849439	MS.gene060338:intron	20.0%
!!	TTTGTTACTATCCTAAAATT+TGG	-	chr8.3:10849419-10849438	MS.gene060338:intron	20.0%
!!!	CCTATAAAATCGATTTTTAA+GGG	-	chr8.3:10849461-10849480	MS.gene060338:intron	20.0%
!!!	CCTTAAAAATCGATTTTATA+GGG	+	chr8.3:10849463-10849482	None:intergenic	20.0%
!!!	TTCGGAAAAATTGATAATTT+TGG	-	chr8.3:10849103-10849122	MS.gene060338:intron	20.0%
!	GAAATATAATGAAGGAAATG+TGG	-	chr8.3:10850001-10850020	MS.gene060338:intron	25.0%
!	GAATAATTTGATATGAGTTG+CGG	-	chr8.3:10849142-10849161	MS.gene060338:intron	25.0%
!	GATCTAAAAAGATCAATGAT+AGG	-	chr8.3:10849395-10849414	MS.gene060338:intron	25.0%
!	GTAGTAATAGATGAAAAACT+TGG	-	chr8.3:10849913-10849932	MS.gene060338:intron	25.0%
!	TTATATTCTTAACCAGAAGT+TGG	+	chr8.3:10849013-10849032	None:intergenic	25.0%
!	TTCATATCTATAGTCAATGT+GGG	-	chr8.3:10849295-10849314	MS.gene060338:intron	25.0%
!!	AAAATCCTTTTGGATTGAAT+CGG	+	chr8.3:10849169-10849188	None:intergenic	25.0%
!!	CAATTGATACAAAATCCTTT+TGG	+	chr8.3:10849179-10849198	None:intergenic	25.0%
!!	TCATTTTAAACCAATTTTGC+AGG	+	chr8.3:10849548-10849567	None:intergenic	25.0%
!!	TGCAAAATTGGTTTAAAATG+AGG	-	chr8.3:10849547-10849566	MS.gene060338:intron	25.0%
!!!	ATAAAATCGATTTTTAAGGG+AGG	-	chr8.3:10849464-10849483	MS.gene060338:intron	25.0%
!!!	CCCTATAAAATCGATTTTTA+AGG	-	chr8.3:10849460-10849479	MS.gene060338:intron	25.0%
!!!	CCCTTAAAAATCGATTTTAT+AGG	+	chr8.3:10849464-10849483	None:intergenic	25.0%
!!!	GTAGTCTTGATTATAAGTTT+TGG	+	chr8.3:10849275-10849294	None:intergenic	25.0%
	AGTAGTGCTTGTAACTAATA+AGG	+	chr8.3:10849672-10849691	None:intergenic	30.0%
	ATATAATGAAGGAAATGTGG+TGG	-	chr8.3:10850004-10850023	MS.gene060338:intron	30.0%
	ATTAGTTACAAGCACTACTT+AGG	-	chr8.3:10849673-10849692	MS.gene060338:intron	30.0%
	ATTTCTCAAACCTGCAAAAT+TGG	-	chr8.3:10849535-10849554	MS.gene060338:intron	30.0%
	CTTCATATCTATAGTCAATG+TGG	-	chr8.3:10849294-10849313	MS.gene060338:intron	30.0%
	GCTTCTTCGCAAAAAAAAAA+AGG	+	chr8.3:10849583-10849602	None:intergenic	30.0%
	TATCCTAAAATTTGGGCTTA+GGG	-	chr8.3:10849427-10849446	MS.gene060338:intron	30.0%
	TCACAAAACTGACATGTAAA+GGG	-	chr8.3:10849241-10849260	MS.gene060338:intron	30.0%
	TCCTTCATTATATTTCCTGA+AGG	+	chr8.3:10849997-10850016	None:intergenic	30.0%
	TCTATCCTAGATCTCTTATA+AGG	+	chr8.3:10849500-10849519	None:intergenic	30.0%
	TGATGAGAGAAAATTGTGAT+TGG	-	chr8.3:10849197-10849216	MS.gene060338:intron	30.0%
	TGCTTGTAACTAATAAGGTT+TGG	+	chr8.3:10849667-10849686	None:intergenic	30.0%
	TGGAATAGATCTTGTAAGTT+AGG	-	chr8.3:10849217-10849236	MS.gene060338:intron	30.0%
	TTAACTATCAATTTAAGCGC+TGG	-	chr8.3:10848939-10848958	MS.gene060338:CDS	30.0%
	TTCGCAAAAAAAAAAAGGCT+TGG	+	chr8.3:10849578-10849597	None:intergenic	30.0%
	TTTACAGCTTCTTGCATTAA+AGG	+	chr8.3:10850041-10850060	None:intergenic	30.0%
!	AATAATTTCTGCTGTCACTT+CGG	-	chr8.3:10849085-10849104	MS.gene060338:intron	30.0%
!	TATGATTCTGATCTTTTTGC+AGG	-	chr8.3:10849971-10849990	MS.gene060338:intron	30.0%
	AAGAGCGAGTTACATTAAGA+TGG	-	chr8.3:10848869-10848888	MS.gene060338:CDS	35.0%
	AGAGCGAGTTACATTAAGAT+GGG	-	chr8.3:10848870-10848889	MS.gene060338:CDS	35.0%
	ATTTGGAGAATGGACACATA+TGG	-	chr8.3:10849353-10849372	MS.gene060338:intron	35.0%
	CCAAACCTTATAAGAGATCT+AGG	-	chr8.3:10849492-10849511	MS.gene060338:intron	35.0%
	CCTAGATCTCTTATAAGGTT+TGG	+	chr8.3:10849495-10849514	None:intergenic	35.0%
	CTATCCTAAAATTTGGGCTT+AGG	-	chr8.3:10849426-10849445	MS.gene060338:intron	35.0%
	CTCACAAAACTGACATGTAA+AGG	-	chr8.3:10849240-10849259	MS.gene060338:intron	35.0%
	GCCTTCAGGAAATATAATGA+AGG	-	chr8.3:10849993-10850012	MS.gene060338:intron	35.0%
	GTCATATCTCTAGTAGAAGT+GGG	-	chr8.3:10849695-10849714	MS.gene060338:intron	35.0%
	TCATATCTCTAGTAGAAGTG+GGG	-	chr8.3:10849696-10849715	MS.gene060338:intron	35.0%
	TCTAGTGAACTAGTAATCGT+GGG	-	chr8.3:10849853-10849872	MS.gene060338:intron	35.0%
	TCTTAACTTAGAGGATCACT+TGG	+	chr8.3:10849066-10849085	None:intergenic	35.0%
	TGCAACTACAGTTCTTCAAA+GGG	+	chr8.3:10849748-10849767	None:intergenic	35.0%
	TGCTGTGAAGATGTTTGATT+TGG	-	chr8.3:10850070-10850089	MS.gene060338:intron	35.0%
	TTCTAGTGAACTAGTAATCG+TGG	-	chr8.3:10849852-10849871	MS.gene060338:intron	35.0%
	TTGCAACTACAGTTCTTCAA+AGG	+	chr8.3:10849749-10849768	None:intergenic	35.0%
	TTTGGAGAATGGACACATAT+GGG	-	chr8.3:10849354-10849373	MS.gene060338:intron	35.0%
!	TAGTTGCAACTTGTTCTCTT+TGG	-	chr8.3:10849760-10849779	MS.gene060338:intron	35.0%
!	TTTTGGTCGTTATTCTCAGT+GGG	-	chr8.3:10849120-10849139	MS.gene060338:intron	35.0%
!!	ATTTTGGTCGTTATTCTCAG+TGG	-	chr8.3:10849119-10849138	MS.gene060338:intron	35.0%
	AGACCTGACATGAAAACAGT+GGG	-	chr8.3:10850125-10850144	MS.gene060338:intron	40.0%
	ATTCTTAACCAGAAGTTGGC+TGG	+	chr8.3:10849009-10849028	None:intergenic	40.0%
	CTTAATGTAACTCGCTCTTC+AGG	+	chr8.3:10848868-10848887	None:intergenic	40.0%
	GCAACTACAGTTCTTCAAAG+GGG	+	chr8.3:10849747-10849766	None:intergenic	40.0%
	GGTCATATCTCTAGTAGAAG+TGG	-	chr8.3:10849694-10849713	MS.gene060338:intron	40.0%
	GTGAGTGCTTAAGAATGAAG+AGG	+	chr8.3:10849947-10849966	None:intergenic	40.0%
	GTGTCCATTCTCCAAATGTA+CGG	+	chr8.3:10849350-10849369	None:intergenic	40.0%
	GTTCTCTTTGGACGTGTTTA+CGG	-	chr8.3:10849772-10849791	MS.gene060338:intron	40.0%
	TAGACCTGACATGAAAACAG+TGG	-	chr8.3:10850124-10850143	MS.gene060338:intron	40.0%
	TCAGGTCTATCTGATCTTAC+TGG	+	chr8.3:10850113-10850132	None:intergenic	40.0%
	TGAGCAATTGTGGGCAATAA+GGG	-	chr8.3:10850148-10850167	MS.gene060338:CDS	40.0%
	TTCTCTTTGGACGTGTTTAC+GGG	-	chr8.3:10849773-10849792	MS.gene060338:intron	40.0%
	TTTACGGGCATTAGCAACAT+GGG	-	chr8.3:10849788-10849807	MS.gene060338:intron	40.0%
!	AGACCCTAAGCCCAAATTTT+AGG	+	chr8.3:10849433-10849452	None:intergenic	40.0%
	AAACAGTGGGTGAGCAATTG+TGG	-	chr8.3:10850138-10850157	MS.gene060338:intron	45.0%
	AACAGTGGGTGAGCAATTGT+GGG	-	chr8.3:10850139-10850158	MS.gene060338:intron	45.0%
	AGAATGGACACATATGGGTC+GGG	-	chr8.3:10849359-10849378	MS.gene060338:intron	45.0%
	AGAGTAGTAGCACAACTGCA+AGG	-	chr8.3:10850183-10850202	MS.gene060338:CDS	45.0%
	AGGACCGTACATTTGGAGAA+TGG	-	chr8.3:10849343-10849362	MS.gene060338:intron	45.0%
	ATTCCTCCCGGTACCAATTT+GGG	+	chr8.3:10849618-10849637	None:intergenic	45.0%
	CTAAAGTAGCCCACCCAAAT+TGG	-	chr8.3:10849602-10849621	MS.gene060338:intron	45.0%
	GAGAATGGACACATATGGGT+CGG	-	chr8.3:10849358-10849377	MS.gene060338:intron	45.0%
	GTGAACTAGTAATCGTGGGA+CGG	-	chr8.3:10849857-10849876	MS.gene060338:intron	45.0%
	GTGAGCAATTGTGGGCAATA+AGG	-	chr8.3:10850147-10850166	MS.gene060338:CDS	45.0%
	GTTTACGGGCATTAGCAACA+TGG	-	chr8.3:10849787-10849806	MS.gene060338:intron	45.0%
	TTCTCCAAATGTACGGTCCT+AGG	+	chr8.3:10849343-10849362	None:intergenic	45.0%
!	CAGTTGTGCTACTACTCTTG+AGG	+	chr8.3:10850181-10850200	None:intergenic	45.0%
!	TCACCCACTGTTTTCATGTC+AGG	+	chr8.3:10850131-10850150	None:intergenic	45.0%
!	TGATCTTTTTGCAGGCCTTC+AGG	-	chr8.3:10849979-10849998	MS.gene060338:intron	45.0%
!!!	GACCTTTTTTCAGCTCCACA+GGG	+	chr8.3:10848846-10848865	None:intergenic	45.0%
!!	ATGATATAATATAATTTAAT+AGG	-	chr8.3:10848976-10848995	MS.gene060338:CDS	5.0%
	AGGTTTGGATCTCCTCCTCA+AGG	+	chr8.3:10849652-10849671	None:intergenic	50.0%
	GATTCCTCCCGGTACCAATT+TGG	+	chr8.3:10849619-10849638	None:intergenic	50.0%
	TAGCCCACCCAAATTGGTAC+CGG	-	chr8.3:10849608-10849627	MS.gene060338:intron	50.0%
!	GCGGACCGATTCAATCCAAA+AGG	-	chr8.3:10849161-10849180	MS.gene060338:intron	50.0%
!!!	GGACCTTTTTTCAGCTCCAC+AGG	+	chr8.3:10848847-10848866	None:intergenic	50.0%
	AATGTACGGTCCTAGGCGTG+AGG	+	chr8.3:10849336-10849355	None:intergenic	55.0%
	AGCCCACCCAAATTGGTACC+GGG	-	chr8.3:10849609-10849628	MS.gene060338:intron	55.0%
	ATGTACGGTCCTAGGCGTGA+GGG	+	chr8.3:10849335-10849354	None:intergenic	55.0%
	CACGCCTAGGACCGTACATT+TGG	-	chr8.3:10849336-10849355	MS.gene060338:intron	55.0%
	CGCCCTGTGGAGCTGAAAAA+AGG	-	chr8.3:10848841-10848860	MS.gene060338:CDS	55.0%
	CTCCCGGTACCAATTTGGGT+GGG	+	chr8.3:10849614-10849633	None:intergenic	55.0%
	GAATCGAACCCGAGACCTTG+AGG	-	chr8.3:10849634-10849653	MS.gene060338:intron	55.0%
	GATCTCCTCCTCAAGGTCTC+GGG	+	chr8.3:10849645-10849664	None:intergenic	55.0%
	GGATCTCCTCCTCAAGGTCT+CGG	+	chr8.3:10849646-10849665	None:intergenic	55.0%
!	TTTTCAGCTCCACAGGGCGA+CGG	+	chr8.3:10848840-10848859	None:intergenic	55.0%
	CCTCCCGGTACCAATTTGGG+TGG	+	chr8.3:10849615-10849634	None:intergenic	60.0%
	GCTGGCATCCAGCCAACTTC+TGG	-	chr8.3:10848998-10849017	MS.gene060338:CDS	60.0%
	GTCTCGGGTTCGATTCCTCC+CGG	+	chr8.3:10849630-10849649	None:intergenic	60.0%
	TCGAACCCGAGACCTTGAGG+AGG	-	chr8.3:10849637-10849656	MS.gene060338:intron	60.0%
	TGTACGGTCCTAGGCGTGAG+GGG	+	chr8.3:10849334-10849353	None:intergenic	60.0%
!	CCACCCAAATTGGTACCGGG+AGG	-	chr8.3:10849612-10849631	MS.gene060338:intron	60.0%
	ATGCACACCCCCTCACGCCT+AGG	-	chr8.3:10849323-10849342	MS.gene060338:intron	65.0%
	GTACGGTCCTAGGCGTGAGG+GGG	+	chr8.3:10849333-10849352	None:intergenic	65.0%
!	TCTGACTGGCCGTCGCCCTG+TGG	-	chr8.3:10848828-10848847	MS.gene060338:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	10848824	10850214	10848824	ID=MS.gene060338
chr8.3	mRNA	10848824	10850214	10848824	ID=MS.gene060338.t1;Parent=MS.gene060338
chr8.3	exon	10850147	10850214	10850147	ID=MS.gene060338.t1.exon1;Parent=MS.gene060338.t1
chr8.3	CDS	10850147	10850214	10850147	ID=cds.MS.gene060338.t1;Parent=MS.gene060338.t1
chr8.3	exon	10848824	10849045	10848824	ID=MS.gene060338.t1.exon2;Parent=MS.gene060338.t1
chr8.3	CDS	10848824	10849045	10848824	ID=cds.MS.gene060338.t1;Parent=MS.gene060338.t1

Gene Sequence

>MS.gene060338

AAATTCTGACTGGCCGTCGCCCTGTGGAGCTGAAAAAAGGTCCTGAAGAGCGAGTTACATTAAGATGGGTAAGCTCACAATTTGTTCTTATTTTGATGTTCTTTACATATATTTGTTAACTATCAATTTAAGCGCTGGCATACTTTGAGAAGATGATATAATATAATTTAATAGGCTGGCATCCAGCCAACTTCTGGTTAAGAATATAATACTTTGAGAAGATGATATAATACTTTGAGCCAAGTGATCCTCTAAGTTAAGAATAATTTCTGCTGTCACTTCGGAAAAATTGATAATTTTGGTCGTTATTCTCAGTGGGAATAATTTGATATGAGTTGCGGACCGATTCAATCCAAAAGGATTTTGTATCAATTGATGAGAGAAAATTGTGATTGGAATAGATCTTGTAAGTTAGGCTCACAAAACTGACATGTAAAGGGATGATTATCCAAAACTTATAATCAAGACTACTTCATATCTATAGTCAATGTGGGACTCTATGCACACCCCCTCACGCCTAGGACCGTACATTTGGAGAATGGACACATATGGGTCGGGTAACAAAAATCTTGATCTAAAAAGATCAATGATAGGCTTTGTTACTATCCTAAAATTTGGGCTTAGGGTCTAACTAAACCCTATAAAATCGATTTTTAAGGGAGGACTATCCAAACCTTATAAGAGATCTAGGATAGACTTTGATACAGTAAAATTTCTCAAACCTGCAAAATTGGTTTAAAATGAGGATTGTCCAAGCCTTTTTTTTTTTGCGAAGAAGCTAAAGTAGCCCACCCAAATTGGTACCGGGAGGAATCGAACCCGAGACCTTGAGGAGGAGATCCAAACCTTATTAGTTACAAGCACTACTTAGGTCATATCTCTAGTAGAAGTGGGGCTTTCAATGTAACTAATTGTAATTTCCCCTTTGAAGAACTGTAGTTGCAACTTGTTCTCTTTGGACGTGTTTACGGGCATTAGCAACATGGGCAAGATTACAGTACTGAAAAGCATTATATATACGCAGAATTTTCTAGTGAACTAGTAATCGTGGGACGGTGTTAATCTTCTTGCTTCTTAGTAATCACTGCAGTAGTAATAGATGAAAAACTTGGTTGTTGTTCCTCTTCATTCTTAAGCACTCACACTATATGATTCTGATCTTTTTGCAGGCCTTCAGGAAATATAATGAAGGAAATGTGGTGGAACTGCTTGATCCTTTAATGCAAGAAGCTGTAAAAACAGATGTTGCTGTGAAGATGTTTGATTTGGCATTTAATTGTGCAGCACCAGTAAGATCAGATAGACCTGACATGAAAACAGTGGGTGAGCAATTGTGGGCAATAAGGGCAGATTACCTCAAGAGTAGTAGCACAACTGCAAGGAGAGAATGA

Protein sequence

>MS.gene060338.t1

KFULAVALWSUKKVLKSELHUDGPSGNIMKEMWWNCLILUCKKLUKQMLLURCLIWHLIVQHQUDQIDLTUKQWVSNCGQUGQITSRVVAQLQGEN