Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061706.t1 | XP_003589688.1 | 95.9 | 390 | 16 | 0 | 1 | 390 | 1 | 390 | 6.30E-196 | 693.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061706.t1 | O22806 | 52.9 | 397 | 175 | 5 | 2 | 390 | 3 | 395 | 4.2e-108 | 392.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061706.t1 | G7IA28 | 95.9 | 390 | 16 | 0 | 1 | 390 | 1 | 390 | 4.5e-196 | 693.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene061706 | 0.846615 | 1.94E-59 | -1.69E-46 |
| MS.gene050297 | MS.gene061706 | 0.838242 | 3.23E-57 | -1.69E-46 |
| MS.gene05124 | MS.gene061706 | 0.800881 | 1.17E-48 | -1.69E-46 |
| MS.gene051742 | MS.gene061706 | 0.812999 | 3.20E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene061706 | 0.806147 | 9.47E-50 | -1.69E-46 |
| MS.gene051914 | MS.gene061706 | 0.806397 | 8.39E-50 | -1.69E-46 |
| MS.gene051955 | MS.gene061706 | 0.832628 | 8.48E-56 | -1.69E-46 |
| MS.gene052143 | MS.gene061706 | 0.854592 | 1.11E-61 | -1.69E-46 |
| MS.gene052308 | MS.gene061706 | 0.846181 | 2.55E-59 | -1.69E-46 |
| MS.gene052367 | MS.gene061706 | 0.892604 | 1.36E-74 | -1.69E-46 |
| MS.gene053173 | MS.gene061706 | 0.842117 | 3.15E-58 | -1.69E-46 |
| MS.gene053416 | MS.gene061706 | 0.84558 | 3.72E-59 | -1.69E-46 |
| MS.gene053417 | MS.gene061706 | 0.846029 | 2.81E-59 | -1.69E-46 |
| MS.gene054551 | MS.gene061706 | 0.84708 | 1.45E-59 | -1.69E-46 |
| MS.gene054593 | MS.gene061706 | 0.835672 | 1.46E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene061706 | 0.815781 | 7.75E-52 | -1.69E-46 |
| MS.gene054662 | MS.gene061706 | 0.838836 | 2.27E-57 | -1.69E-46 |
| MS.gene055308 | MS.gene061706 | 0.863361 | 2.63E-64 | -1.69E-46 |
| MS.gene055578 | MS.gene061706 | 0.870189 | 1.76E-66 | -1.69E-46 |
| MS.gene055579 | MS.gene061706 | 0.810476 | 1.13E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene061706 | 0.852617 | 4.11E-61 | -1.69E-46 |
| MS.gene056041 | MS.gene061706 | 0.88522 | 9.81E-72 | -1.69E-46 |
| MS.gene05640 | MS.gene061706 | 0.870037 | 1.97E-66 | -1.69E-46 |
| MS.gene056526 | MS.gene061706 | 0.844331 | 8.08E-59 | -1.69E-46 |
| MS.gene056528 | MS.gene061706 | 0.821703 | 3.51E-53 | -1.69E-46 |
| MS.gene05652 | MS.gene061706 | 0.809918 | 1.49E-50 | -1.69E-46 |
| MS.gene05732 | MS.gene061706 | 0.806492 | 8.01E-50 | -1.69E-46 |
| MS.gene057458 | MS.gene061706 | 0.857599 | 1.46E-62 | -1.69E-46 |
| MS.gene058128 | MS.gene061706 | 0.814367 | 1.60E-51 | -1.69E-46 |
| MS.gene058818 | MS.gene061706 | 0.805058 | 1.60E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene061706 | 0.846551 | 2.02E-59 | -1.69E-46 |
| MS.gene059553 | MS.gene061706 | 0.805148 | 1.54E-49 | -1.69E-46 |
| MS.gene059616 | MS.gene061706 | 0.800652 | 1.30E-48 | -1.69E-46 |
| MS.gene060473 | MS.gene061706 | 0.860363 | 2.18E-63 | -1.69E-46 |
| MS.gene060565 | MS.gene061706 | 0.848417 | 6.21E-60 | -1.69E-46 |
| MS.gene06093 | MS.gene061706 | 0.856934 | 2.30E-62 | -1.69E-46 |
| MS.gene061099 | MS.gene061706 | 0.936577 | 1.39E-97 | -1.69E-46 |
| MS.gene061260 | MS.gene061706 | 0.877837 | 4.56E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061706.t1 | MTR_1g035090 | 95.897 | 390 | 16 | 0 | 1 | 390 | 1 | 390 | 0.0 | 773 |
| MS.gene061706.t1 | MTR_3g071460 | 34.028 | 144 | 94 | 1 | 72 | 215 | 15 | 157 | 5.29e-24 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061706.t1 | AT2G33560 | 55.087 | 403 | 158 | 6 | 2 | 390 | 3 | 396 | 2.48e-150 | 431 |
| MS.gene061706.t1 | AT2G33560 | 55.224 | 402 | 158 | 7 | 2 | 390 | 3 | 395 | 8.60e-150 | 429 |
| MS.gene061706.t1 | AT5G05510 | 34.028 | 144 | 94 | 1 | 68 | 211 | 15 | 157 | 4.54e-22 | 97.8 |
| MS.gene061706.t1 | AT2G20635 | 38.519 | 135 | 82 | 1 | 79 | 212 | 11 | 145 | 1.49e-19 | 90.9 |
Find 97 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATGGAAATCCTTTA+AGG | 0.118247 | 1.3:-19319687 | MS.gene061706:intron |
| AGCATTTGAATCTTTATAAA+TGG | 0.207110 | 1.3:+19319805 | None:intergenic |
| GGCGAAAATCAGCACCTTAA+AGG | 0.243628 | 1.3:+19319673 | None:intergenic |
| TCCCACAGCGAACTGGAATT+AGG | 0.287201 | 1.3:-19319539 | MS.gene061706:CDS |
| ACAATGCAATTCCTGCAAAA+TGG | 0.312255 | 1.3:-19319700 | MS.gene061706:CDS |
| TTGGCATTCGGAACGGTATA+AGG | 0.315818 | 1.3:-19321190 | MS.gene061706:CDS |
| GAGGACTTACCCTCTGCTTT+CGG | 0.357727 | 1.3:+19319009 | None:intergenic |
| TTCTTTGAAGGTTTCCCATT+CGG | 0.362222 | 1.3:+19322456 | None:intergenic |
| CCCACAGCGAACTGGAATTA+GGG | 0.370316 | 1.3:-19319538 | MS.gene061706:CDS |
| TATAAAGATTCAAATGCTAA+TGG | 0.377164 | 1.3:-19319800 | MS.gene061706:CDS |
| CTTCTCGCCAAGGGAGATAA+TGG | 0.383418 | 1.3:-19320286 | MS.gene061706:intron |
| GGCAGAAAATTGCTTTGATA+AGG | 0.384613 | 1.3:-19321028 | MS.gene061706:CDS |
| AGATTTCTTGAGGTAATTAT+CGG | 0.385309 | 1.3:+19322369 | None:intergenic |
| GAGGCACCTGTGCGTAGCTT+TGG | 0.395057 | 1.3:-19320313 | MS.gene061706:CDS |
| TTGCCTAGTCTTCAAATTTG+AGG | 0.403651 | 1.3:+19318990 | None:intergenic |
| AGCATATGAAATGTAGAAAT+CGG | 0.414170 | 1.3:+19320957 | None:intergenic |
| ATCTTTCTGTTAAGAATGAT+AGG | 0.426195 | 1.3:-19320121 | MS.gene061706:intron |
| CAGAACGATTACTGTTCAAT+GGG | 0.434609 | 1.3:+19320171 | None:intergenic |
| ATCCAGACCCGTCACACTCT+TGG | 0.440039 | 1.3:-19319760 | MS.gene061706:CDS |
| CATTTCATATGCTTCGCACT+TGG | 0.440560 | 1.3:-19320947 | MS.gene061706:CDS |
| CAGAAAGATTACTGCTCAAA+GGG | 0.441133 | 1.3:+19320135 | None:intergenic |
| CTATGCCAAGTTCAAATGTC+TGG | 0.447120 | 1.3:+19320896 | None:intergenic |
| CGGGTCTGGATGAGGTGGGC+AGG | 0.447626 | 1.3:+19319772 | None:intergenic |
| GCAGAACGATTACTGTTCAA+TGG | 0.449743 | 1.3:+19320170 | None:intergenic |
| AATGCTAGAAACTCTGTCTC+TGG | 0.451174 | 1.3:+19322496 | None:intergenic |
| CCTCCAGGTGGAGATAGCTC+AGG | 0.451234 | 1.3:-19321249 | MS.gene061706:CDS |
| AGCCAAGAGTGTGACGGGTC+TGG | 0.456101 | 1.3:+19319758 | None:intergenic |
| ATCTGGGGAGGCTGCTATGC+GGG | 0.457917 | 1.3:+19318799 | None:intergenic |
| GACTAGGCAAGACGACGAAA+AGG | 0.475024 | 1.3:-19318977 | MS.gene061706:CDS |
| CTAGCATTGAAGAGAGAAAC+GGG | 0.485326 | 1.3:-19322481 | MS.gene061706:CDS |
| TTTCAGGTCCCACAGCGAAC+TGG | 0.488532 | 1.3:-19319546 | MS.gene061706:intron |
| TCTAGCATTGAAGAGAGAAA+CGG | 0.489301 | 1.3:-19322482 | MS.gene061706:CDS |
| CACTCTTGGCTCAAACTTGG+TGG | 0.494308 | 1.3:-19319746 | MS.gene061706:CDS |
| GAAGAGAAACCGAGTTACTA+AGG | 0.496845 | 1.3:-19318842 | MS.gene061706:intron |
| AGGTGGAGATAGCTCAGGGC+TGG | 0.499562 | 1.3:-19321244 | MS.gene061706:CDS |
| TCACACTCTTGGCTCAAACT+TGG | 0.500855 | 1.3:-19319749 | MS.gene061706:CDS |
| GGTTGAGAATGTTAACGTTA+CGG | 0.502066 | 1.3:+19322410 | None:intergenic |
| GCGAAGATCCTCTTCTCCCT+TGG | 0.503308 | 1.3:-19322211 | MS.gene061706:CDS |
| AGTCCTCAAATTTGAAGACT+AGG | 0.504667 | 1.3:-19318993 | MS.gene061706:CDS |
| GAATCTTTATAAATGGAAAG+TGG | 0.506850 | 1.3:+19319812 | None:intergenic |
| CCCTAATTCCAGTTCGCTGT+GGG | 0.510029 | 1.3:+19319538 | None:intergenic |
| ACGACGAAAAGGACTTCAAA+AGG | 0.511321 | 1.3:-19318966 | MS.gene061706:intron |
| CTATGCGGGAAGTTGCGTAA+TGG | 0.514966 | 1.3:+19318813 | None:intergenic |
| GGACTAACCATTATCTCCCT+TGG | 0.517175 | 1.3:+19320279 | None:intergenic |
| TTGTGTTGTAGGTGCGCCCT+TGG | 0.521457 | 1.3:-19320195 | MS.gene061706:intron |
| GAGAGAAACGGGAACCGAAT+GGG | 0.521715 | 1.3:-19322470 | MS.gene061706:CDS |
| CACTCTAACCAAGGGAGAAG+AGG | 0.524920 | 1.3:+19322203 | None:intergenic |
| TGGATCCTTCCTTAGTAACT+CGG | 0.526271 | 1.3:+19318833 | None:intergenic |
| GTTCAAGAAGCGTTTCCTCC+AGG | 0.530661 | 1.3:-19321264 | MS.gene061706:CDS |
| AACGTGAGACCTTTGAAAAG+AGG | 0.533683 | 1.3:-19322433 | MS.gene061706:CDS |
| ATCAACAAACACCGGGATGC+AGG | 0.534208 | 1.3:+19319494 | None:intergenic |
| ACAGAAAGATTACTGCTCAA+AGG | 0.540389 | 1.3:+19320134 | None:intergenic |
| GTTTGAGCCAAGAGTGTGAC+GGG | 0.542618 | 1.3:+19319753 | None:intergenic |
| ATTACTGTTCAATGGGGCCA+AGG | 0.546177 | 1.3:+19320178 | None:intergenic |
| GCTAACCAGACATTTGAACT+TGG | 0.546783 | 1.3:-19320901 | MS.gene061706:CDS |
| TTTGGAACTCTTCTCGCCAA+GGG | 0.546864 | 1.3:-19320295 | MS.gene061706:CDS |
| GTTGAATAAGAGATTTCTTG+AGG | 0.547731 | 1.3:+19322359 | None:intergenic |
| GAGTGTGACGGGTCTGGATG+AGG | 0.550155 | 1.3:+19319764 | None:intergenic |
| CTCCAGGTGGAGATAGCTCA+GGG | 0.552572 | 1.3:-19321248 | MS.gene061706:CDS |
| CATTTGAACTTGGCATAGCT+AGG | 0.559506 | 1.3:-19320891 | MS.gene061706:intron |
| TAATCGTTCTGCTAAGCCCT+TGG | 0.560187 | 1.3:-19320159 | MS.gene061706:CDS |
| AGAAACCGAGTTACTAAGGA+AGG | 0.560277 | 1.3:-19318838 | MS.gene061706:CDS |
| TTCTTGTACGCTCAATGTCA+AGG | 0.562298 | 1.3:-19320475 | MS.gene061706:CDS |
| TGGAGATAGCTCAGGGCTGG+TGG | 0.563908 | 1.3:-19321241 | MS.gene061706:CDS |
| TGTGACGGGTCTGGATGAGG+TGG | 0.564742 | 1.3:+19319767 | None:intergenic |
| GGAATTAGGGCTACAGTGGT+TGG | 0.569381 | 1.3:-19319525 | MS.gene061706:CDS |
| CTTTGGAACTCTTCTCGCCA+AGG | 0.569504 | 1.3:-19320296 | MS.gene061706:CDS |
| CATTCTTCATCAACAAACAC+CGG | 0.569992 | 1.3:+19319486 | None:intergenic |
| TGGTGCAAGTGCCTGCATCC+CGG | 0.572563 | 1.3:-19319505 | MS.gene061706:CDS |
| CGGTGTGACACTTGAGAGCA+TGG | 0.576550 | 1.3:+19322389 | None:intergenic |
| ATGGTAAAGGTGTATGAAGT+GGG | 0.584360 | 1.3:-19321286 | MS.gene061706:intron |
| GCCCTAATTCCAGTTCGCTG+TGG | 0.587920 | 1.3:+19319537 | None:intergenic |
| ATGAACACTCACTCTAACCA+AGG | 0.590861 | 1.3:+19322194 | None:intergenic |
| AATCTCTTATTCAACAACAA+AGG | 0.592599 | 1.3:-19322351 | MS.gene061706:intron |
| GAAGCGATTGATGATTACAA+AGG | 0.594208 | 1.3:-19322233 | MS.gene061706:CDS |
| AGAGAGAAACGGGAACCGAA+TGG | 0.595749 | 1.3:-19322471 | MS.gene061706:CDS |
| ATTACTGCTCAAAGGGACCA+AGG | 0.596863 | 1.3:+19320142 | None:intergenic |
| AGAGTTCCAAAGCTACGCAC+AGG | 0.601818 | 1.3:+19320307 | None:intergenic |
| AGCCCTGAGCTATCTCCACC+TGG | 0.603020 | 1.3:+19321246 | None:intergenic |
| TTTGTTGATGAAGAATGTCA+AGG | 0.612992 | 1.3:-19319480 | MS.gene061706:CDS |
| TTCATTAAATCCGAAAGCAG+AGG | 0.613152 | 1.3:-19319019 | MS.gene061706:CDS |
| GTGACGGGTCTGGATGAGGT+GGG | 0.615219 | 1.3:+19319768 | None:intergenic |
| TGGTCGTGCCGAAAGAAACA+AGG | 0.616341 | 1.3:-19319726 | MS.gene061706:CDS |
| TTACTGTTCAATGGGGCCAA+GGG | 0.617013 | 1.3:+19320179 | None:intergenic |
| TCATTAAATCCGAAAGCAGA+GGG | 0.617997 | 1.3:-19319018 | MS.gene061706:CDS |
| TTACTGCTCAAAGGGACCAA+GGG | 0.621492 | 1.3:+19320143 | None:intergenic |
| CAAGAAGCGTTTCCTCCAGG+TGG | 0.638066 | 1.3:-19321261 | MS.gene061706:CDS |
| AACTGGAATTAGGGCTACAG+TGG | 0.642915 | 1.3:-19319529 | MS.gene061706:CDS |
| GATGGTAAAGGTGTATGAAG+TGG | 0.647245 | 1.3:-19321287 | MS.gene061706:intron |
| TTGTTGATGAAGAATGTCAA+GGG | 0.663241 | 1.3:-19319479 | MS.gene061706:intron |
| ATTTGCGATATCTCAAAGTG+TGG | 0.664209 | 1.3:-19321164 | MS.gene061706:CDS |
| TGAACACTCACTCTAACCAA+GGG | 0.670206 | 1.3:+19322195 | None:intergenic |
| ATTCTTCATCAACAAACACC+GGG | 0.674711 | 1.3:+19319487 | None:intergenic |
| AGTTTGAGCCAAGAGTGTGA+CGG | 0.680288 | 1.3:+19319752 | None:intergenic |
| TATCTGGGGAGGCTGCTATG+CGG | 0.695957 | 1.3:+19318798 | None:intergenic |
| CCTGAGCTATCTCCACCTGG+AGG | 0.737732 | 1.3:+19321249 | None:intergenic |
| AGAACGATTACTGTTCAATG+GGG | 0.751717 | 1.3:+19320172 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATATTTTTAATTTTA+GGG | - | chr1.3:19319198-19319217 | MS.gene061706:intron | 0.0% |
| !! | AAAATAAAATGATTTATGTT+TGG | - | chr1.3:19319758-19319777 | MS.gene061706:CDS | 10.0% |
| !! | GTATTATATTCAAATAAAAA+TGG | + | chr1.3:19322190-19322209 | None:intergenic | 10.0% |
| !!! | AACATAAATCATTTTATTTT+AGG | + | chr1.3:19319758-19319777 | None:intergenic | 10.0% |
| !!! | ATTTTCTATTTTTTTATTGA+TGG | - | chr1.3:19320018-19320037 | MS.gene061706:intron | 10.0% |
| !! | ATAAAATGATGTATATGTTT+AGG | + | chr1.3:19322435-19322454 | None:intergenic | 15.0% |
| !! | TTATATTCAAATAAAAATGG+CGG | + | chr1.3:19322187-19322206 | None:intergenic | 15.0% |
| !! | TTTAATTATAAACCTATGTT+TGG | + | chr1.3:19319984-19320003 | None:intergenic | 15.0% |
| !! | TTTGAAAAATGAAGTATATA+TGG | + | chr1.3:19321315-19321334 | None:intergenic | 15.0% |
| !!! | ATATTATAAAATTTTGGAAG+AGG | + | chr1.3:19320911-19320930 | None:intergenic | 15.0% |
| !!! | ATATTTTAAACCCATTTTTA+AGG | + | chr1.3:19322094-19322113 | None:intergenic | 15.0% |
| !!! | TAATTTTAGGGTTTATTTTT+AGG | - | chr1.3:19319210-19319229 | MS.gene061706:intron | 15.0% |
| !!! | TATTTTTTTATTGATGGTAA+AGG | - | chr1.3:19320024-19320043 | MS.gene061706:intron | 15.0% |
| !!! | TGATATGATTTTGAAATTTT+AGG | - | chr1.3:19319242-19319261 | MS.gene061706:intron | 15.0% |
| !!! | TTTCATTTTTGCATTAATTA+TGG | - | chr1.3:19320584-19320603 | MS.gene061706:intron | 15.0% |
| !!! | TTTTCATTATTAAATCTTGT+AGG | - | chr1.3:19321476-19321495 | MS.gene061706:intron | 15.0% |
| !! | AAGATAAGAATTTCATTACA+AGG | + | chr1.3:19320487-19320506 | None:intergenic | 20.0% |
| !! | AAGTAAAATGAATTATACAC+TGG | - | chr1.3:19319889-19319908 | MS.gene061706:intron | 20.0% |
| !! | AATGTAAAATGGTTTATGTT+TGG | - | chr1.3:19319364-19319383 | MS.gene061706:intron | 20.0% |
| !! | AATTAACAGTTAACAAACAA+AGG | + | chr1.3:19320209-19320228 | None:intergenic | 20.0% |
| !! | AGCATTTGAATCTTTATAAA+TGG | + | chr1.3:19321521-19321540 | None:intergenic | 20.0% |
| !! | ATGAAGTATATATGGAAATA+AGG | + | chr1.3:19321307-19321326 | None:intergenic | 20.0% |
| !! | CAATTTATACAAATTTGGAA+AGG | - | chr1.3:19320651-19320670 | MS.gene061706:intron | 20.0% |
| !! | GGTTTCAATTTATACAAATT+TGG | - | chr1.3:19320646-19320665 | MS.gene061706:intron | 20.0% |
| !! | TAAAATGATTTATGTTTGGA+TGG | - | chr1.3:19319762-19319781 | MS.gene061706:CDS | 20.0% |
| !! | TATAAAGATTCAAATGCTAA+TGG | - | chr1.3:19321523-19321542 | MS.gene061706:intron | 20.0% |
| !! | TATATGAATAATGAGTTTCT+AGG | - | chr1.3:19321373-19321392 | MS.gene061706:intron | 20.0% |
| !!! | AAAATTGATTTTGACATGTT+TGG | + | chr1.3:19319495-19319514 | None:intergenic | 20.0% |
| !!! | CATTTTAATTGATGAGTTTT+TGG | - | chr1.3:19319049-19319068 | MS.gene061706:intron | 20.0% |
| !!! | CTAAATATTCTATTTTGCTA+TGG | - | chr1.3:19320766-19320785 | MS.gene061706:intron | 20.0% |
| !!! | GGAAGTTATATATTCTTTTT+TGG | - | chr1.3:19320316-19320335 | MS.gene061706:CDS | 20.0% |
| !!! | TTCATTTTACTTTTAGAGAA+TGG | + | chr1.3:19319881-19319900 | None:intergenic | 20.0% |
| !!! | TTTGTAAAATTTATTTTGGC+TGG | - | chr1.3:19319625-19319644 | MS.gene061706:intron | 20.0% |
| ! | AATCTCTTATTCAACAACAA+AGG | - | chr1.3:19318972-19318991 | MS.gene061706:CDS | 25.0% |
| ! | AGATTTCTTGAGGTAATTAT+CGG | + | chr1.3:19318957-19318976 | None:intergenic | 25.0% |
| ! | AGCATATGAAATGTAGAAAT+CGG | + | chr1.3:19320369-19320388 | None:intergenic | 25.0% |
| ! | ATCTTTCTGTTAAGAATGAT+AGG | - | chr1.3:19321202-19321221 | MS.gene061706:CDS | 25.0% |
| ! | ATGACTTGATTATGTGAAAT+TGG | - | chr1.3:19319321-19319340 | MS.gene061706:intron | 25.0% |
| ! | CAAAAGGATATAATTGTTCA+AGG | - | chr1.3:19320610-19320629 | MS.gene061706:intron | 25.0% |
| ! | GAACATATATAAAATGACCT+TGG | - | chr1.3:19321395-19321414 | MS.gene061706:intron | 25.0% |
| ! | GAATCTTTATAAATGGAAAG+TGG | + | chr1.3:19321514-19321533 | None:intergenic | 25.0% |
| ! | TATTGAGACAAAAAGTAATG+TGG | + | chr1.3:19321088-19321107 | None:intergenic | 25.0% |
| ! | TGGTTTCTTATCTTATATCT+TGG | - | chr1.3:19320460-19320479 | MS.gene061706:CDS | 25.0% |
| ! | TTGTATAAATTGAAACCACA+TGG | + | chr1.3:19320643-19320662 | None:intergenic | 25.0% |
| ! | TTTAAACTAGAACCAAACAT+AGG | - | chr1.3:19319969-19319988 | MS.gene061706:intron | 25.0% |
| ! | TTTGCTAACACCTTAAAAAT+GGG | - | chr1.3:19322081-19322100 | MS.gene061706:intron | 25.0% |
| !! | AAAGTGAGTTGAATGTAAAA+TGG | - | chr1.3:19319353-19319372 | MS.gene061706:intron | 25.0% |
| !! | TTTTTGGATGCAAATGAAAT+TGG | - | chr1.3:19320332-19320351 | MS.gene061706:intron | 25.0% |
| !!! | ATTGTAGCTTTGGATTTATT+TGG | - | chr1.3:19321241-19321260 | MS.gene061706:CDS | 25.0% |
| !!! | ATTGTTTTCCTTGTTTCTTT+CGG | + | chr1.3:19321608-19321627 | None:intergenic | 25.0% |
| !!! | CTGAATATTTTTTGTGTTGT+AGG | - | chr1.3:19321117-19321136 | MS.gene061706:intron | 25.0% |
| AACAAGAAGAGGAAGAAATA+AGG | + | chr1.3:19321276-19321295 | None:intergenic | 30.0% | |
| AACTCTACAAATTAGAGCTT+AGG | + | chr1.3:19322008-19322027 | None:intergenic | 30.0% | |
| AATGTGGAGAGAATTGAAAA+GGG | + | chr1.3:19321072-19321091 | None:intergenic | 30.0% | |
| ACAAAAGCTATAGATGTATG+TGG | - | chr1.3:19320871-19320890 | MS.gene061706:intron | 30.0% | |
| ACTCTACAAATTAGAGCTTA+GGG | + | chr1.3:19322007-19322026 | None:intergenic | 30.0% | |
| ACTGTAAAACACAATGTGAT+AGG | + | chr1.3:19322285-19322304 | None:intergenic | 30.0% | |
| ATCATCGATCAATCTTGAAA+AGG | + | chr1.3:19321697-19321716 | None:intergenic | 30.0% | |
| ATTGGAATTTCACAATTCCA+AGG | + | chr1.3:19321415-19321434 | None:intergenic | 30.0% | |
| CAATGTTTCTTAATGCTTTC+AGG | - | chr1.3:19321761-19321780 | MS.gene061706:intron | 30.0% | |
| GCATTAATTATGGATGCAAA+AGG | - | chr1.3:19320594-19320613 | MS.gene061706:intron | 30.0% | |
| GGAACTTAGGCTTAAAATTT+GGG | + | chr1.3:19320703-19320722 | None:intergenic | 30.0% | |
| GTTGAATAAGAGATTTCTTG+AGG | + | chr1.3:19318967-19318986 | None:intergenic | 30.0% | |
| TAAATCCAAAGCTACAATAC+TGG | + | chr1.3:19321239-19321258 | None:intergenic | 30.0% | |
| TAAGGTATATCATGGAACTT+AGG | + | chr1.3:19320716-19320735 | None:intergenic | 30.0% | |
| TAATGTGGAGAGAATTGAAA+AGG | + | chr1.3:19321073-19321092 | None:intergenic | 30.0% | |
| TCATCAACTAAGGTATATCA+TGG | + | chr1.3:19320724-19320743 | None:intergenic | 30.0% | |
| TGCAAAATGGAAATCCTTTA+AGG | - | chr1.3:19321636-19321655 | MS.gene061706:intron | 30.0% | |
| TGGAACTTAGGCTTAAAATT+TGG | + | chr1.3:19320704-19320723 | None:intergenic | 30.0% | |
| ! | AAGCTCTAATTTGTAGAGTT+GGG | - | chr1.3:19322008-19322027 | MS.gene061706:intron | 30.0% |
| ! | GAGATGTTGTTATTGTTTAC+AGG | - | chr1.3:19320274-19320293 | MS.gene061706:intron | 30.0% |
| ! | GCAAGCAAAATTGATTCTAA+AGG | + | chr1.3:19319948-19319967 | None:intergenic | 30.0% |
| ! | GTTTGCTAACACCTTAAAAA+TGG | - | chr1.3:19322080-19322099 | MS.gene061706:intron | 30.0% |
| ! | TAAGCTCTAATTTGTAGAGT+TGG | - | chr1.3:19322007-19322026 | MS.gene061706:intron | 30.0% |
| ! | TTAAAGGATTTCCATTTTGC+AGG | + | chr1.3:19321637-19321656 | None:intergenic | 30.0% |
| ! | TTGTTGATGAAGAATGTCAA+GGG | - | chr1.3:19321844-19321863 | MS.gene061706:intron | 30.0% |
| ! | TTTGTTGATGAAGAATGTCA+AGG | - | chr1.3:19321843-19321862 | MS.gene061706:intron | 30.0% |
| !! | TTCTAGCTTCAAGTTAGAAT+AGG | - | chr1.3:19319444-19319463 | MS.gene061706:intron | 30.0% |
| !! | TTTCACTTTTATAGCCTGTT+TGG | - | chr1.3:19321944-19321963 | MS.gene061706:intron | 30.0% |
| !!! | AGGGTTTATTTTTAGGAGAT+TGG | - | chr1.3:19319217-19319236 | MS.gene061706:intron | 30.0% |
| !!! | TGAAATTTTAGGACCTGATT+GGG | - | chr1.3:19319253-19319272 | MS.gene061706:intron | 30.0% |
| !!! | TTCTTCCTCTTCTTGTTTTT+TGG | - | chr1.3:19321279-19321298 | MS.gene061706:CDS | 30.0% |
| !!! | TTGAAATTTTAGGACCTGAT+TGG | - | chr1.3:19319252-19319271 | MS.gene061706:intron | 30.0% |
| !!! | TTTGCTGTTTTGATTTTGAG+TGG | - | chr1.3:19320239-19320258 | MS.gene061706:intron | 30.0% |
| AAAACATTTGACACTTTCGC+TGG | + | chr1.3:19320566-19320585 | None:intergenic | 35.0% | |
| AAAAGGCAGGAAAAAGAAAG+AGG | + | chr1.3:19321680-19321699 | None:intergenic | 35.0% | |
| AAACATTTGACACTTTCGCT+GGG | + | chr1.3:19320565-19320584 | None:intergenic | 35.0% | |
| AATTTCATGCAATGTACCTC+TGG | - | chr1.3:19321432-19321451 | MS.gene061706:intron | 35.0% | |
| ACAATGCAATTCCTGCAAAA+TGG | - | chr1.3:19321623-19321642 | MS.gene061706:intron | 35.0% | |
| ACAGAAAGATTACTGCTCAA+AGG | + | chr1.3:19321192-19321211 | None:intergenic | 35.0% | |
| ACATCAATCTGATCCTTCTT+TGG | - | chr1.3:19322128-19322147 | MS.gene061706:intron | 35.0% | |
| AGAACGATTACTGTTCAATG+GGG | + | chr1.3:19321154-19321173 | None:intergenic | 35.0% | |
| AGATTTCTGTCATATCAGAG+AGG | + | chr1.3:19322408-19322427 | None:intergenic | 35.0% | |
| AGGATCCAAAAAACAAGAAG+AGG | + | chr1.3:19321287-19321306 | None:intergenic | 35.0% | |
| AGGCTGAAAATCAATTCTTC+AGG | - | chr1.3:19319822-19319841 | MS.gene061706:CDS | 35.0% | |
| AGTCCTCAAATTTGAAGACT+AGG | - | chr1.3:19322330-19322349 | MS.gene061706:intron | 35.0% | |
| ATAAAAACTGAGAAACCCAG+AGG | + | chr1.3:19321451-19321470 | None:intergenic | 35.0% | |
| ATGGTAAAGCTTTCCAAAGA+AGG | + | chr1.3:19322144-19322163 | None:intergenic | 35.0% | |
| ATGTGGAGAGAATTGAAAAG+GGG | + | chr1.3:19321071-19321090 | None:intergenic | 35.0% | |
| ATTCTTCATCAACAAACACC+GGG | + | chr1.3:19321839-19321858 | None:intergenic | 35.0% | |
| ATTTCATGCAATGTACCTCT+GGG | - | chr1.3:19321433-19321452 | MS.gene061706:intron | 35.0% | |
| ATTTGCGATATCTCAAAGTG+TGG | - | chr1.3:19320159-19320178 | MS.gene061706:CDS | 35.0% | |
| CAGAAAGATTACTGCTCAAA+GGG | + | chr1.3:19321191-19321210 | None:intergenic | 35.0% | |
| CAGAACGATTACTGTTCAAT+GGG | + | chr1.3:19321155-19321174 | None:intergenic | 35.0% | |
| CATACACTAAATACCCAATC+AGG | + | chr1.3:19319269-19319288 | None:intergenic | 35.0% | |
| CATTCTTCATCAACAAACAC+CGG | + | chr1.3:19321840-19321859 | None:intergenic | 35.0% | |
| GATTTCTGTCATATCAGAGA+GGG | + | chr1.3:19322407-19322426 | None:intergenic | 35.0% | |
| GGCAGAAAATTGCTTTGATA+AGG | - | chr1.3:19320295-19320314 | MS.gene061706:CDS | 35.0% | |
| GGTTGAGAATGTTAACGTTA+CGG | + | chr1.3:19318916-19318935 | None:intergenic | 35.0% | |
| GTGAAAGAGAAAAACAGACT+AGG | + | chr1.3:19321930-19321949 | None:intergenic | 35.0% | |
| GTGATATGACTCATCAACTA+AGG | + | chr1.3:19320734-19320753 | None:intergenic | 35.0% | |
| TCATTAAATCCGAAAGCAGA+GGG | - | chr1.3:19322305-19322324 | MS.gene061706:intron | 35.0% | |
| TTATAGCCTGTTTGGTTAAG+CGG | - | chr1.3:19321952-19321971 | MS.gene061706:intron | 35.0% | |
| TTCATTAAATCCGAAAGCAG+AGG | - | chr1.3:19322304-19322323 | MS.gene061706:intron | 35.0% | |
| ! | AGAGGTACATTGCATGAAAT+TGG | + | chr1.3:19321433-19321452 | None:intergenic | 35.0% |
| ! | ATACGTGTGTGCATTTGTTA+TGG | - | chr1.3:19320677-19320696 | MS.gene061706:intron | 35.0% |
| ! | ATGGTAAAGGTGTATGAAGT+GGG | - | chr1.3:19320037-19320056 | MS.gene061706:intron | 35.0% |
| ! | GAAGCGATTGATGATTACAA+AGG | - | chr1.3:19319090-19319109 | MS.gene061706:intron | 35.0% |
| ! | GTAAGTTGAATCACTTTGCA+AGG | - | chr1.3:19321866-19321885 | MS.gene061706:intron | 35.0% |
| ! | TCTAGCATTGAAGAGAGAAA+CGG | - | chr1.3:19318841-19318860 | MS.gene061706:CDS | 35.0% |
| ! | TGAGTTGAATGATTTAACCG+AGG | - | chr1.3:19319802-19319821 | MS.gene061706:CDS | 35.0% |
| ! | TTCTTTGAAGGTTTCCCATT+CGG | + | chr1.3:19318870-19318889 | None:intergenic | 35.0% |
| ! | TTGCCTAGTCTTCAAATTTG+AGG | + | chr1.3:19322336-19322355 | None:intergenic | 35.0% |
| !! | GAAGAATTGATTTTCAGCCT+CGG | + | chr1.3:19319822-19319841 | None:intergenic | 35.0% |
| !! | GCAGCTTTCAGTTTTTCAAT+GGG | + | chr1.3:19320817-19320836 | None:intergenic | 35.0% |
| !! | TGCAGCTTTCAGTTTTTCAA+TGG | + | chr1.3:19320818-19320837 | None:intergenic | 35.0% |
| !!! | ATTTTGGCTGGTAGTCATTT+TGG | - | chr1.3:19319637-19319656 | MS.gene061706:intron | 35.0% |
| !!! | GCGTGTTGTTGGATTTTTTA+TGG | - | chr1.3:19322245-19322264 | MS.gene061706:CDS | 35.0% |
| AAAGTGTGGCTCGAATATGT+AGG | - | chr1.3:19320173-19320192 | MS.gene061706:CDS | 40.0% | |
| AAGTGTGGCTCGAATATGTA+GGG | - | chr1.3:19320174-19320193 | MS.gene061706:CDS | 40.0% | |
| AATGCTAGAAACTCTGTCTC+TGG | + | chr1.3:19318830-19318849 | None:intergenic | 40.0% | |
| AATTAGAGCTTAGGGAACGT+AGG | + | chr1.3:19321999-19322018 | None:intergenic | 40.0% | |
| ACACCTCCACAATCAATTCT+GGG | - | chr1.3:19319515-19319534 | MS.gene061706:CDS | 40.0% | |
| ACGACGAAAAGGACTTCAAA+AGG | - | chr1.3:19322357-19322376 | MS.gene061706:CDS | 40.0% | |
| AGAAACCGAGTTACTAAGGA+AGG | - | chr1.3:19322485-19322504 | MS.gene061706:CDS | 40.0% | |
| ATGAACACTCACTCTAACCA+AGG | + | chr1.3:19319132-19319151 | None:intergenic | 40.0% | |
| ATTAGAGCTTAGGGAACGTA+GGG | + | chr1.3:19321998-19322017 | None:intergenic | 40.0% | |
| CAGGAAAAAGAAAGAGGACT+AGG | + | chr1.3:19321674-19321693 | None:intergenic | 40.0% | |
| CATTTCATATGCTTCGCACT+TGG | - | chr1.3:19320376-19320395 | MS.gene061706:intron | 40.0% | |
| CATTTGAACTTGGCATAGCT+AGG | - | chr1.3:19320432-19320451 | MS.gene061706:intron | 40.0% | |
| CCAAAGCTACAATACTGGTA+GGG | + | chr1.3:19321234-19321253 | None:intergenic | 40.0% | |
| CTAGGTAGCAGAAGAAATGA+GGG | + | chr1.3:19320975-19320994 | None:intergenic | 40.0% | |
| CTATGCCAAGTTCAAATGTC+TGG | + | chr1.3:19320430-19320449 | None:intergenic | 40.0% | |
| GAAGAGAAACCGAGTTACTA+AGG | - | chr1.3:19322481-19322500 | MS.gene061706:CDS | 40.0% | |
| GCAGAACGATTACTGTTCAA+TGG | + | chr1.3:19321156-19321175 | None:intergenic | 40.0% | |
| GCTAACCAGACATTTGAACT+TGG | - | chr1.3:19320422-19320441 | MS.gene061706:intron | 40.0% | |
| GTTCAAGGTTTATGTCCATG+TGG | - | chr1.3:19320625-19320644 | MS.gene061706:intron | 40.0% | |
| GTTGAGCATTCCTGCAAAAA+TGG | + | chr1.3:19320795-19320814 | None:intergenic | 40.0% | |
| TACACCTCCACAATCAATTC+TGG | - | chr1.3:19319514-19319533 | MS.gene061706:CDS | 40.0% | |
| TCCAAAGCTACAATACTGGT+AGG | + | chr1.3:19321235-19321254 | None:intergenic | 40.0% | |
| TCGATCAATCTTGAAAAGGC+AGG | + | chr1.3:19321693-19321712 | None:intergenic | 40.0% | |
| TGAACACTCACTCTAACCAA+GGG | + | chr1.3:19319131-19319150 | None:intergenic | 40.0% | |
| TGAGAAACTAAGCCTATGTC+TGG | + | chr1.3:19319557-19319576 | None:intergenic | 40.0% | |
| TGCCATGGAGGTTACAATTT+GGG | + | chr1.3:19321900-19321919 | None:intergenic | 40.0% | |
| TGGATCCTTCCTTAGTAACT+CGG | + | chr1.3:19322493-19322512 | None:intergenic | 40.0% | |
| TGTGGAGAGAATTGAAAAGG+GGG | + | chr1.3:19321070-19321089 | None:intergenic | 40.0% | |
| TTCTTGTACGCTCAATGTCA+AGG | - | chr1.3:19320848-19320867 | MS.gene061706:intron | 40.0% | |
| ! | AACGTGAGACCTTTGAAAAG+AGG | - | chr1.3:19318890-19318909 | MS.gene061706:intron | 40.0% |
| ! | AGCAATGTGTTCGTGCTTTT+TGG | - | chr1.3:19320114-19320133 | MS.gene061706:intron | 40.0% |
| ! | AGGTCTCACGTTTTCTTTGA+AGG | + | chr1.3:19318882-19318901 | None:intergenic | 40.0% |
| ! | CTAGCATTGAAGAGAGAAAC+GGG | - | chr1.3:19318842-19318861 | MS.gene061706:intron | 40.0% |
| ! | GATGGTAAAGGTGTATGAAG+TGG | - | chr1.3:19320036-19320055 | MS.gene061706:intron | 40.0% |
| !! | TGTTCGTGCTTTTTGGCATT+CGG | - | chr1.3:19320121-19320140 | MS.gene061706:intron | 40.0% |
| AACTGGAATTAGGGCTACAG+TGG | - | chr1.3:19321794-19321813 | MS.gene061706:intron | 45.0% | |
| AATTCTGGGTGCTCCAAATG+TGG | - | chr1.3:19319529-19319548 | MS.gene061706:CDS | 45.0% | |
| ACATCACCGCTTAACCAAAC+AGG | + | chr1.3:19321961-19321980 | None:intergenic | 45.0% | |
| ATTACTGCTCAAAGGGACCA+AGG | + | chr1.3:19321184-19321203 | None:intergenic | 45.0% | |
| ATTACTGTTCAATGGGGCCA+AGG | + | chr1.3:19321148-19321167 | None:intergenic | 45.0% | |
| CCAAATGTGGAACCAGACAT+AGG | - | chr1.3:19319542-19319561 | MS.gene061706:CDS | 45.0% | |
| CCAAATGTGGAACCAGACAT+GGG | - | chr1.3:19319542-19319561 | MS.gene061706:CDS | 45.0% | |
| CCCTACCAGTATTGTAGCTT+TGG | - | chr1.3:19321231-19321250 | MS.gene061706:CDS | 45.0% | |
| CCTAGGTAGCAGAAGAAATG+AGG | + | chr1.3:19320976-19320995 | None:intergenic | 45.0% | |
| CCTCATTTCTTCTGCTACCT+AGG | - | chr1.3:19320973-19320992 | MS.gene061706:CDS | 45.0% | |
| CTAGGAACCAGTCGAAAAAG+AGG | - | chr1.3:19320991-19321010 | MS.gene061706:CDS | 45.0% | |
| GGACTAACCATTATCTCCCT+TGG | + | chr1.3:19321047-19321066 | None:intergenic | 45.0% | |
| GGCGAAAATCAGCACCTTAA+AGG | + | chr1.3:19321653-19321672 | None:intergenic | 45.0% | |
| GTCCCAAATTGTAACCTCCA+TGG | - | chr1.3:19321895-19321914 | MS.gene061706:intron | 45.0% | |
| GTGCCATGGAGGTTACAATT+TGG | + | chr1.3:19321901-19321920 | None:intergenic | 45.0% | |
| GTGGAGAGAATTGAAAAGGG+GGG | + | chr1.3:19321069-19321088 | None:intergenic | 45.0% | |
| TAATCGTTCTGCTAAGCCCT+TGG | - | chr1.3:19321164-19321183 | MS.gene061706:CDS | 45.0% | |
| TCACACTCTTGGCTCAAACT+TGG | - | chr1.3:19321574-19321593 | MS.gene061706:intron | 45.0% | |
| TCCAAATGTGGAACCAGACA+TGG | - | chr1.3:19319541-19319560 | MS.gene061706:CDS | 45.0% | |
| TGGAGAGAATTGAAAAGGGG+GGG | + | chr1.3:19321068-19321087 | None:intergenic | 45.0% | |
| TTACTGCTCAAAGGGACCAA+GGG | + | chr1.3:19321183-19321202 | None:intergenic | 45.0% | |
| TTACTGTTCAATGGGGCCAA+GGG | + | chr1.3:19321147-19321166 | None:intergenic | 45.0% | |
| TTCGCTGGGAGTTATTCAAC+TGG | + | chr1.3:19320551-19320570 | None:intergenic | 45.0% | |
| TTGGCATTCGGAACGGTATA+AGG | - | chr1.3:19320133-19320152 | MS.gene061706:CDS | 45.0% | |
| ! | ACGTTACGGCCTCTTTTCAA+AGG | + | chr1.3:19318902-19318921 | None:intergenic | 45.0% |
| ! | AGTTTGAGCCAAGAGTGTGA+CGG | + | chr1.3:19321574-19321593 | None:intergenic | 45.0% |
| ! | CCTATGTCTGGTTCCACATT+TGG | + | chr1.3:19319545-19319564 | None:intergenic | 45.0% |
| ! | TTTGGAACTCTTCTCGCCAA+GGG | - | chr1.3:19321028-19321047 | MS.gene061706:CDS | 45.0% |
| !! | GTGCTTTTTGGCATTCGGAA+CGG | - | chr1.3:19320126-19320145 | MS.gene061706:CDS | 45.0% |
| !!! | CATTTTGGCTGCTCCAAATG+TGG | - | chr1.3:19319652-19319671 | MS.gene061706:intron | 45.0% |
| !!! | CTCTTTTTCGACTGGTTCCT+AGG | + | chr1.3:19320993-19321012 | None:intergenic | 45.0% |
| !!! | ATAATCATATTATAAAATTT+TGG | + | chr1.3:19320917-19320936 | None:intergenic | 5.0% |
| !!! | GTTATAATATTTTTAATTTT+AGG | - | chr1.3:19319197-19319216 | MS.gene061706:intron | 5.0% |
| !!! | TAAGTTTTTTTAAATAAAAA+TGG | + | chr1.3:19322163-19322182 | None:intergenic | 5.0% |
| !!! | TTATTTTGTAAAATTTATTT+TGG | - | chr1.3:19319621-19319640 | MS.gene061706:intron | 5.0% |
| AGACTAGGTGCATAGTGCCA+TGG | + | chr1.3:19321915-19321934 | None:intergenic | 50.0% | |
| AGAGAGAAACGGGAACCGAA+TGG | - | chr1.3:19318852-19318871 | MS.gene061706:intron | 50.0% | |
| AGAGTTCCAAAGCTACGCAC+AGG | + | chr1.3:19321019-19321038 | None:intergenic | 50.0% | |
| ATCAACAAACACCGGGATGC+AGG | + | chr1.3:19321832-19321851 | None:intergenic | 50.0% | |
| CACTCTAACCAAGGGAGAAG+AGG | + | chr1.3:19319123-19319142 | None:intergenic | 50.0% | |
| CACTCTTGGCTCAAACTTGG+TGG | - | chr1.3:19321577-19321596 | MS.gene061706:intron | 50.0% | |
| CCCACAGCGAACTGGAATTA+GGG | - | chr1.3:19321785-19321804 | MS.gene061706:intron | 50.0% | |
| CCCTAATTCCAGTTCGCTGT+GGG | + | chr1.3:19321788-19321807 | None:intergenic | 50.0% | |
| CTATGCGGGAAGTTGCGTAA+TGG | + | chr1.3:19322513-19322532 | None:intergenic | 50.0% | |
| CTTCTCGCCAAGGGAGATAA+TGG | - | chr1.3:19321037-19321056 | MS.gene061706:intron | 50.0% | |
| GACTAGGCAAGACGACGAAA+AGG | - | chr1.3:19322346-19322365 | MS.gene061706:intron | 50.0% | |
| GAGAGAAACGGGAACCGAAT+GGG | - | chr1.3:19318853-19318872 | MS.gene061706:intron | 50.0% | |
| GAGGACTTACCCTCTGCTTT+CGG | + | chr1.3:19322317-19322336 | None:intergenic | 50.0% | |
| GCACCCAGAATTGATTGTGG+AGG | + | chr1.3:19319521-19319540 | None:intergenic | 50.0% | |
| GGAATTAGGGCTACAGTGGT+TGG | - | chr1.3:19321798-19321817 | MS.gene061706:intron | 50.0% | |
| TCCCACAGCGAACTGGAATT+AGG | - | chr1.3:19321784-19321803 | MS.gene061706:intron | 50.0% | |
| TGGTCGTGCCGAAAGAAACA+AGG | - | chr1.3:19321597-19321616 | MS.gene061706:intron | 50.0% | |
| ! | CCCATGTCTGGTTCCACATT+TGG | + | chr1.3:19319668-19319687 | None:intergenic | 50.0% |
| ! | CTTGGCATAGCTAGGTACTG+TGG | - | chr1.3:19320440-19320459 | MS.gene061706:intron | 50.0% |
| ! | GGAGCACCCAGAATTGATTG+TGG | + | chr1.3:19319524-19319543 | None:intergenic | 50.0% |
| ! | GTTTGAGCCAAGAGTGTGAC+GGG | + | chr1.3:19321573-19321592 | None:intergenic | 50.0% |
| !! | CTTTGGAACTCTTCTCGCCA+AGG | - | chr1.3:19321027-19321046 | MS.gene061706:CDS | 50.0% |
| !! | GCTATGGCGACCATTTTTGC+AGG | - | chr1.3:19320782-19320801 | MS.gene061706:intron | 50.0% |
| !! | GTTCAAGAAGCGTTTCCTCC+AGG | - | chr1.3:19320059-19320078 | MS.gene061706:intron | 50.0% |
| !! | TTGCTGTTTGCGCGTGTTGT+TGG | - | chr1.3:19322234-19322253 | MS.gene061706:CDS | 50.0% |
| !!! | ACAGGTGCCTCTTTTTCGAC+TGG | + | chr1.3:19321001-19321020 | None:intergenic | 50.0% |
| ATCCAGACCCGTCACACTCT+TGG | - | chr1.3:19321563-19321582 | MS.gene061706:intron | 55.0% | |
| CCAGACATGGGCTTAGGTGT+AGG | - | chr1.3:19319677-19319696 | MS.gene061706:intron | 55.0% | |
| CCTACACCTAAGCCCATGTC+TGG | + | chr1.3:19319680-19319699 | None:intergenic | 55.0% | |
| CGGTGTGACACTTGAGAGCA+TGG | + | chr1.3:19318937-19318956 | None:intergenic | 55.0% | |
| CTAGGTGCATAGTGCCATGG+AGG | + | chr1.3:19321912-19321931 | None:intergenic | 55.0% | |
| CTCCAGGTGGAGATAGCTCA+GGG | - | chr1.3:19320075-19320094 | MS.gene061706:intron | 55.0% | |
| GCCCTAATTCCAGTTCGCTG+TGG | + | chr1.3:19321789-19321808 | None:intergenic | 55.0% | |
| GCGAAGATCCTCTTCTCCCT+TGG | - | chr1.3:19319112-19319131 | MS.gene061706:intron | 55.0% | |
| GTGGAACCAGACATGGGCTT+AGG | - | chr1.3:19319671-19319690 | MS.gene061706:intron | 55.0% | |
| TATCTGGGGAGGCTGCTATG+CGG | + | chr1.3:19322528-19322547 | None:intergenic | 55.0% | |
| TTGTGTTGTAGGTGCGCCCT+TGG | - | chr1.3:19321128-19321147 | MS.gene061706:intron | 55.0% | |
| ! | TTTCAGGTCCCACAGCGAAC+TGG | - | chr1.3:19321777-19321796 | MS.gene061706:intron | 55.0% |
| !! | CAAGAAGCGTTTCCTCCAGG+TGG | - | chr1.3:19320062-19320081 | MS.gene061706:intron | 55.0% |
| AGCCCTGAGCTATCTCCACC+TGG | + | chr1.3:19320080-19320099 | None:intergenic | 60.0% | |
| AGGTGGAGATAGCTCAGGGC+TGG | - | chr1.3:19320079-19320098 | MS.gene061706:intron | 60.0% | |
| ATCTGGGGAGGCTGCTATGC+GGG | + | chr1.3:19322527-19322546 | None:intergenic | 60.0% | |
| CCTCCAGGTGGAGATAGCTC+AGG | - | chr1.3:19320074-19320093 | MS.gene061706:intron | 60.0% | |
| CCTGAGCTATCTCCACCTGG+AGG | + | chr1.3:19320077-19320096 | None:intergenic | 60.0% | |
| TGGAGATAGCTCAGGGCTGG+TGG | - | chr1.3:19320082-19320101 | MS.gene061706:intron | 60.0% | |
| TGGTGCAAGTGCCTGCATCC+CGG | - | chr1.3:19321818-19321837 | MS.gene061706:intron | 60.0% | |
| ! | GAGGCACCTGTGCGTAGCTT+TGG | - | chr1.3:19321010-19321029 | MS.gene061706:CDS | 60.0% |
| !! | AGCCAAGAGTGTGACGGGTC+TGG | + | chr1.3:19321568-19321587 | None:intergenic | 60.0% |
| !! | GAGTGTGACGGGTCTGGATG+AGG | + | chr1.3:19321562-19321581 | None:intergenic | 60.0% |
| !! | GTGACGGGTCTGGATGAGGT+GGG | + | chr1.3:19321558-19321577 | None:intergenic | 60.0% |
| !! | TGTGACGGGTCTGGATGAGG+TGG | + | chr1.3:19321559-19321578 | None:intergenic | 60.0% |
| CGGGTCTGGATGAGGTGGGC+AGG | + | chr1.3:19321554-19321573 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 19318797 | 19322548 | 19318797 | ID=MS.gene061706 |
| chr1.3 | mRNA | 19318797 | 19322548 | 19318797 | ID=MS.gene061706.t1;Parent=MS.gene061706 |
| chr1.3 | exon | 19322352 | 19322548 | 19322352 | ID=MS.gene061706.t1.exon1;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19322352 | 19322548 | 19322352 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19322206 | 19322265 | 19322206 | ID=MS.gene061706.t1.exon2;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19322206 | 19322265 | 19322206 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19321155 | 19321299 | 19321155 | ID=MS.gene061706.t1.exon3;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19321155 | 19321299 | 19321155 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19320892 | 19321049 | 19320892 | ID=MS.gene061706.t1.exon4;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19320892 | 19321049 | 19320892 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19320460 | 19320541 | 19320460 | ID=MS.gene061706.t1.exon5;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19320460 | 19320541 | 19320460 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19320287 | 19320350 | 19320287 | ID=MS.gene061706.t1.exon6;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19320287 | 19320350 | 19320287 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19320122 | 19320206 | 19320122 | ID=MS.gene061706.t1.exon7;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19320122 | 19320206 | 19320122 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19319688 | 19319847 | 19319688 | ID=MS.gene061706.t1.exon8;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19319688 | 19319847 | 19319688 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19319480 | 19319562 | 19319480 | ID=MS.gene061706.t1.exon9;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19319480 | 19319562 | 19319480 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19318967 | 19319041 | 19318967 | ID=MS.gene061706.t1.exon10;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19318967 | 19319041 | 19318967 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| chr1.3 | exon | 19318797 | 19318860 | 19318797 | ID=MS.gene061706.t1.exon11;Parent=MS.gene061706.t1 |
| chr1.3 | CDS | 19318797 | 19318860 | 19318797 | ID=cds.MS.gene061706.t1;Parent=MS.gene061706.t1 |
| Gene Sequence |
| Protein sequence |
