Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063235.t1 | XP_013467060.1 | 89.9 | 818 | 64 | 5 | 1 | 804 | 1 | 813 | 0.00E+00 | 1322.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063235.t1 | F4JUQ2 | 45.1 | 933 | 350 | 18 | 6 | 803 | 15 | 920 | 1.5e-192 | 674.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063235.t1 | A0A072VSI4 | 89.9 | 818 | 64 | 5 | 1 | 804 | 1 | 813 | 0.0e+00 | 1322.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene063235 | 0.802442 | 5.60E-49 | -1.69E-46 |
| MS.gene049298 | MS.gene063235 | 0.827142 | 1.84E-54 | -1.69E-46 |
| MS.gene050710 | MS.gene063235 | 0.804071 | 2.58E-49 | -1.69E-46 |
| MS.gene050875 | MS.gene063235 | 0.822247 | 2.62E-53 | -1.69E-46 |
| MS.gene051914 | MS.gene063235 | 0.856057 | 4.16E-62 | -1.69E-46 |
| MS.gene052308 | MS.gene063235 | 0.843387 | 1.45E-58 | -1.69E-46 |
| MS.gene053108 | MS.gene063235 | 0.836457 | 9.25E-57 | -1.69E-46 |
| MS.gene053173 | MS.gene063235 | 0.845561 | 3.76E-59 | -1.69E-46 |
| MS.gene053348 | MS.gene063235 | 0.879054 | 1.70E-69 | -1.69E-46 |
| MS.gene054018 | MS.gene063235 | 0.815971 | 7.03E-52 | -1.69E-46 |
| MS.gene054551 | MS.gene063235 | 0.85298 | 3.23E-61 | -1.69E-46 |
| MS.gene054593 | MS.gene063235 | 0.84398 | 1.00E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene063235 | 0.851297 | 9.73E-61 | -1.69E-46 |
| MS.gene054662 | MS.gene063235 | 0.82804 | 1.12E-54 | -1.69E-46 |
| MS.gene054850 | MS.gene063235 | 0.803124 | 4.05E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene063235 | 0.829536 | 4.87E-55 | -1.69E-46 |
| MS.gene055308 | MS.gene063235 | 0.81875 | 1.67E-52 | -1.69E-46 |
| MS.gene055578 | MS.gene063235 | 0.827146 | 1.84E-54 | -1.69E-46 |
| MS.gene055617 | MS.gene063235 | 0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene056041 | MS.gene063235 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene05640 | MS.gene063235 | 0.857673 | 1.39E-62 | -1.69E-46 |
| MS.gene05652 | MS.gene063235 | 0.836883 | 7.21E-57 | -1.69E-46 |
| MS.gene057367 | MS.gene063235 | 0.815617 | 8.43E-52 | -1.69E-46 |
| MS.gene057458 | MS.gene063235 | 0.803899 | 2.80E-49 | -1.69E-46 |
| MS.gene057669 | MS.gene063235 | 0.855209 | 7.35E-62 | -1.69E-46 |
| MS.gene058128 | MS.gene063235 | 0.857049 | 2.13E-62 | -1.69E-46 |
| MS.gene058789 | MS.gene063235 | 0.802475 | 5.51E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene063235 | 0.872234 | 3.72E-67 | -1.69E-46 |
| MS.gene05926 | MS.gene063235 | 0.824546 | 7.61E-54 | -1.69E-46 |
| MS.gene059616 | MS.gene063235 | 0.833652 | 4.71E-56 | -1.69E-46 |
| MS.gene059843 | MS.gene063235 | 0.806166 | 9.39E-50 | -1.69E-46 |
| MS.gene059844 | MS.gene063235 | 0.800059 | 1.72E-48 | -1.69E-46 |
| MS.gene060291 | MS.gene063235 | 0.804276 | 2.34E-49 | -1.69E-46 |
| MS.gene06093 | MS.gene063235 | 0.861191 | 1.22E-63 | -1.69E-46 |
| MS.gene061260 | MS.gene063235 | 0.818539 | 1.86E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063235.t1 | MTR_1g041685 | 92.910 | 818 | 39 | 4 | 1 | 804 | 1 | 813 | 0.0 | 1452 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063235.t1 | AT4G14310 | 55.786 | 674 | 244 | 14 | 159 | 803 | 245 | 893 | 0.0 | 731 |
| MS.gene063235.t1 | AT4G14310 | 53.638 | 701 | 244 | 15 | 159 | 803 | 245 | 920 | 0.0 | 714 |
Find 202 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGCCTTCCTTTGATTATA+TGG | 0.144093 | 1.3:+24973065 | MS.gene063235:CDS |
| GATATTCAAGATAAGATTTC+TGG | 0.145396 | 1.3:+24969497 | MS.gene063235:CDS |
| ATAATAATGGTCAGAATCTT+AGG | 0.168246 | 1.3:+24973016 | MS.gene063235:CDS |
| GAATTTCTTCTGATGTTATT+TGG | 0.185326 | 1.3:-24971419 | None:intergenic |
| AACAAGCAAGTTGGTGTTAA+TGG | 0.205018 | 1.3:+24969563 | MS.gene063235:CDS |
| TGGATCGGGTTAAGGGCTTT+TGG | 0.206941 | 1.3:-24969058 | None:intergenic |
| CTAGGGTTAGGGTTAGGGTT+AGG | 0.241241 | 1.3:+24969291 | MS.gene063235:CDS |
| TGCAGCAGTTTCACAAGTTT+GGG | 0.255478 | 1.3:+24972900 | MS.gene063235:CDS |
| ATGCAGCAGTTTCACAAGTT+TGG | 0.261725 | 1.3:+24972899 | MS.gene063235:CDS |
| GATGGATCTGGTGGTGGGTT+TGG | 0.276239 | 1.3:-24968922 | None:intergenic |
| AATGCGAGTAGTTTGGTTAA+AGG | 0.279990 | 1.3:+24969617 | MS.gene063235:CDS |
| TGAAAGATGATGATGCATTA+AGG | 0.281509 | 1.3:+24972980 | MS.gene063235:CDS |
| CTAGTGCTAGGGTTAGGGTT+AGG | 0.289745 | 1.3:+24969285 | MS.gene063235:CDS |
| ATGGGGCTAGTGCTAGGGTT+AGG | 0.294707 | 1.3:+24969279 | MS.gene063235:CDS |
| ACTTTATCAAATACTGCTAA+TGG | 0.297271 | 1.3:+24969260 | MS.gene063235:CDS |
| ACAAGCAAGTTGGTGTTAAT+GGG | 0.297814 | 1.3:+24969564 | MS.gene063235:CDS |
| GCTTTGGTTTCTGTTCCTTT+TGG | 0.300813 | 1.3:+24971707 | MS.gene063235:CDS |
| GTCTAGAATCTGCTGATAAT+AGG | 0.312218 | 1.3:-24971454 | None:intergenic |
| TAGGGTTAGGGTTAGGGTTA+GGG | 0.327312 | 1.3:+24969292 | MS.gene063235:CDS |
| TAGTGCTAGGGTTAGGGTTA+GGG | 0.328058 | 1.3:+24969286 | MS.gene063235:CDS |
| AGTTTGCGTGAGGTGGTTAG+AGG | 0.332989 | 1.3:-24968948 | None:intergenic |
| TGTGAGTGTGCATTGGATTC+TGG | 0.333389 | 1.3:-24972874 | None:intergenic |
| TGGCCTTCCTTTGATTATAT+GGG | 0.341031 | 1.3:+24973066 | MS.gene063235:CDS |
| ACGAGGGATGGATCGGGTTA+AGG | 0.345962 | 1.3:-24969066 | None:intergenic |
| CTTTATCAAATACTGCTAAT+GGG | 0.361657 | 1.3:+24969261 | MS.gene063235:CDS |
| TTCACTTAGTCCTCAAGCTT+TGG | 0.370007 | 1.3:+24971691 | MS.gene063235:CDS |
| ACATTGACACCACCATGTTT+TGG | 0.370793 | 1.3:-24972715 | None:intergenic |
| ATGATGAAGTGTTGAGAGAA+GGG | 0.372345 | 1.3:-24968971 | None:intergenic |
| GTCATGGGTGTGTGCGGTTT+AGG | 0.372652 | 1.3:+24972937 | MS.gene063235:CDS |
| AAGCTGTTCCATTGTCGAAT+TGG | 0.374183 | 1.3:-24971370 | None:intergenic |
| CACAGATTCTATCAACATAT+TGG | 0.375325 | 1.3:+24972657 | MS.gene063235:CDS |
| CGAGGGATGGATCGGGTTAA+GGG | 0.377486 | 1.3:-24969065 | None:intergenic |
| AACTTGCTTGTTATCATCTT+CGG | 0.385424 | 1.3:-24969552 | None:intergenic |
| GCCGATGAATGCGAGTAGTT+TGG | 0.385485 | 1.3:+24969610 | MS.gene063235:CDS |
| TTGGTCCTGATGACTTATAT+TGG | 0.385525 | 1.3:+24973046 | MS.gene063235:CDS |
| CGCGGCGATTCTGTCTTCCT+TGG | 0.389341 | 1.3:+24972754 | MS.gene063235:CDS |
| TAGAGATAGGATAATGGTTA+AGG | 0.392030 | 1.3:+24969691 | MS.gene063235:CDS |
| GATTATGATAATAATAATAA+TGG | 0.399127 | 1.3:+24973003 | MS.gene063235:CDS |
| CTGAGCTCGGTGGAGGGGTT+CGG | 0.400608 | 1.3:+24971771 | MS.gene063235:CDS |
| GATGGGGTTAGTGATTGATT+TGG | 0.402215 | 1.3:-24969195 | None:intergenic |
| AGCTGAATGGGATAGGGAAC+AGG | 0.403079 | 1.3:+24970026 | MS.gene063235:CDS |
| TGCTGATAATAGGGTGGAAC+TGG | 0.403387 | 1.3:-24971444 | None:intergenic |
| AGGAGTGATGGATCTGGTGG+TGG | 0.406263 | 1.3:-24968928 | None:intergenic |
| ATGCACCGCTTCCACTTCAA+TGG | 0.411690 | 1.3:+24972777 | MS.gene063235:CDS |
| GAAAGATGATGATGCATTAA+GGG | 0.420975 | 1.3:+24972981 | MS.gene063235:CDS |
| AGCACGCAATACCTCAGAAT+TGG | 0.421647 | 1.3:-24970134 | None:intergenic |
| TCTAGAATCTGCTGATAATA+GGG | 0.424508 | 1.3:-24971453 | None:intergenic |
| GCTGGTTGGTTTGTTTCTGA+AGG | 0.428070 | 1.3:+24970058 | MS.gene063235:CDS |
| GTTGATTAGAGATAGGATAA+TGG | 0.428815 | 1.3:+24969685 | MS.gene063235:CDS |
| GGGCTAGGACTTCTGCCTCT+AGG | 0.429083 | 1.3:-24969125 | None:intergenic |
| CTTGAGGAGTTTGATGATCA+AGG | 0.430335 | 1.3:+24969929 | MS.gene063235:CDS |
| CTTCTGATGTTATTTGGTAA+AGG | 0.438611 | 1.3:-24971413 | None:intergenic |
| CAGGAGCTTCACCTAGCATA+TGG | 0.440207 | 1.3:+24971213 | MS.gene063235:CDS |
| TGGGGCTAGTGCTAGGGTTA+GGG | 0.442742 | 1.3:+24969280 | MS.gene063235:CDS |
| TGATGAAAATCCGATAGCTT+TGG | 0.443541 | 1.3:+24969766 | MS.gene063235:CDS |
| TCCGGTGCCGCCGTCATCGA+CGG | 0.443938 | 1.3:+24968894 | MS.gene063235:CDS |
| ATATTCAAGATAAGATTTCT+GGG | 0.446505 | 1.3:+24969498 | MS.gene063235:CDS |
| CTAGCATATGGAGAGATTGC+TGG | 0.447217 | 1.3:+24971225 | MS.gene063235:CDS |
| AAGCTGAATCCATTACTTTG+TGG | 0.450673 | 1.3:+24971660 | MS.gene063235:CDS |
| TCAAAAGTGTGATATTGATA+TGG | 0.452117 | 1.3:+24969886 | MS.gene063235:CDS |
| CTGGTTGGTTTGTTTCTGAA+GGG | 0.454495 | 1.3:+24970059 | MS.gene063235:CDS |
| GGATCTGGTGGTGGGTTTGG+TGG | 0.454964 | 1.3:-24968919 | None:intergenic |
| GCCGTCGATGACGGCGGCAC+CGG | 0.456392 | 1.3:-24968895 | None:intergenic |
| GAAGGCCAATATAAGTCATC+AGG | 0.457783 | 1.3:-24973051 | None:intergenic |
| GATGATGAAGTGTTGAGAGA+AGG | 0.457819 | 1.3:-24968972 | None:intergenic |
| TCGGTGGAGGGGTTCGGAAG+AGG | 0.460770 | 1.3:+24971777 | MS.gene063235:CDS |
| GAAACCCAAAAGTGCTGAAA+AGG | 0.462715 | 1.3:+24969232 | MS.gene063235:CDS |
| CTGCTAATGGGGCTAGTGCT+AGG | 0.464447 | 1.3:+24969273 | MS.gene063235:CDS |
| TGGTATCTTAAGACCAATGC+CGG | 0.467305 | 1.3:-24972695 | None:intergenic |
| ACAGGATTGCTGCGGCTGGT+TGG | 0.470699 | 1.3:+24970044 | MS.gene063235:CDS |
| AGCTGAATCCATTACTTTGT+GGG | 0.472042 | 1.3:+24971661 | MS.gene063235:CDS |
| AACTTTAAGCTGAATGGGAT+AGG | 0.477626 | 1.3:+24970019 | MS.gene063235:CDS |
| GGGTAATTCTGACTTTGTCA+TGG | 0.480274 | 1.3:+24972921 | MS.gene063235:CDS |
| CGGGTTTGATTGAGATCTGA+GGG | 0.481262 | 1.3:-24969146 | None:intergenic |
| TTTGGTGGCGCCGTCGATGA+CGG | 0.484022 | 1.3:-24968904 | None:intergenic |
| TCAGAAGCCTGTTGTTGCTA+TGG | 0.484728 | 1.3:+24971586 | MS.gene063235:CDS |
| ATTTACATCCCACAAAGTAA+TGG | 0.487368 | 1.3:-24971669 | None:intergenic |
| ATCATAAGTTGATTAGAGAT+AGG | 0.487739 | 1.3:+24969678 | MS.gene063235:CDS |
| GCAGGCAACACAATGGAATC+CGG | 0.492406 | 1.3:+24971305 | MS.gene063235:CDS |
| AGAAGGGAGTTTGCGTGAGG+TGG | 0.492821 | 1.3:-24968955 | None:intergenic |
| GGCTAGGACTTCTGCCTCTA+GGG | 0.492947 | 1.3:-24969124 | None:intergenic |
| TTGGACTTTCGCCAACCATC+CGG | 0.494054 | 1.3:+24972676 | MS.gene063235:CDS |
| TTTCGCCAACCATCCGGCAT+TGG | 0.494605 | 1.3:+24972682 | MS.gene063235:CDS |
| AATAATACACAAGAGGAAGA+AGG | 0.498742 | 1.3:+24969965 | MS.gene063235:CDS |
| GAGTATTCCATAGCAACAAC+AGG | 0.498841 | 1.3:-24971593 | None:intergenic |
| ATCGTTTCCTTCAGCTTCTG+AGG | 0.498980 | 1.3:-24972620 | None:intergenic |
| TGCACCGCTTCCACTTCAAT+GGG | 0.503398 | 1.3:+24972778 | MS.gene063235:CDS |
| GATCAGTACGAGGGATGGAT+CGG | 0.504505 | 1.3:-24969073 | None:intergenic |
| TGCAGCAACGACATATCTTC+CGG | 0.505531 | 1.3:-24971279 | None:intergenic |
| TCGATCAACGGAGACGCGGC+GGG | 0.506605 | 1.3:-24969165 | None:intergenic |
| TAATAATGGTCAGAATCTTA+GGG | 0.507975 | 1.3:+24973017 | MS.gene063235:CDS |
| ATCATGTCCACTCGTCGCTC+CGG | 0.508770 | 1.3:+24968876 | None:intergenic |
| ACCAAACTACTCGCATTCAT+CGG | 0.512207 | 1.3:-24969611 | None:intergenic |
| ACTTTAAGCTGAATGGGATA+GGG | 0.512555 | 1.3:+24970020 | MS.gene063235:CDS |
| CCTCGATTTCTCCACTGCAA+AGG | 0.515233 | 1.3:-24971620 | None:intergenic |
| ACTGATGCTGAGCTCGGTGG+AGG | 0.515561 | 1.3:+24971764 | MS.gene063235:CDS |
| AATAGTAATAGTAATTGTAA+TGG | 0.515702 | 1.3:+24969329 | MS.gene063235:CDS |
| CAAGGTTCAGATGGTTGCTC+CGG | 0.516951 | 1.3:+24971260 | MS.gene063235:CDS |
| CCTTGTGATGGGGTTGAGAA+AGG | 0.518400 | 1.3:+24969842 | MS.gene063235:CDS |
| AGTGGGAAAGTTTCAAATCA+TGG | 0.525214 | 1.3:+24969815 | MS.gene063235:CDS |
| CAGAATCTTAGGGAAGTTGT+TGG | 0.525917 | 1.3:+24973027 | MS.gene063235:CDS |
| GGGAACAGGATTGCTGCGGC+TGG | 0.526089 | 1.3:+24970040 | MS.gene063235:CDS |
| GGTTAGAGGAGTGATGGATC+TGG | 0.526348 | 1.3:-24968934 | None:intergenic |
| ATGGTGAGCAAGTCATGAGT+TGG | 0.526992 | 1.3:+24971558 | MS.gene063235:CDS |
| AAGTGGAAGCGGTGCATCCA+AGG | 0.528492 | 1.3:-24972771 | None:intergenic |
| TGGTGAGCAAGTCATGAGTT+GGG | 0.528610 | 1.3:+24971559 | MS.gene063235:CDS |
| ATTAGATGCCTCCACATAGC+TGG | 0.531150 | 1.3:-24973120 | None:intergenic |
| TGCTGGCTAATTCGCGCTCA+AGG | 0.531576 | 1.3:+24971242 | MS.gene063235:CDS |
| TTCTGGGATTGAGAAAGCTA+TGG | 0.531919 | 1.3:+24969514 | MS.gene063235:CDS |
| GGTTAAGGATTCGACGGTGA+AGG | 0.532486 | 1.3:+24969706 | MS.gene063235:CDS |
| GGTAATTCTGACTTTGTCAT+GGG | 0.532909 | 1.3:+24972922 | MS.gene063235:CDS |
| GCGACACTTGGAGAAGGGAG+TGG | 0.533536 | 1.3:+24969797 | MS.gene063235:CDS |
| TGATTGAGATCTGAGGGGCT+AGG | 0.534259 | 1.3:-24969140 | None:intergenic |
| CTTGTGATGGGGTTGAGAAA+GGG | 0.536261 | 1.3:+24969843 | MS.gene063235:CDS |
| TAAGACCAATGCCGGATGGT+TGG | 0.539535 | 1.3:-24972687 | None:intergenic |
| TGATGCTGAGCTCGGTGGAG+GGG | 0.539606 | 1.3:+24971766 | MS.gene063235:CDS |
| TGCTAATGGGGCTAGTGCTA+GGG | 0.539845 | 1.3:+24969274 | MS.gene063235:CDS |
| ATTGGATTCTGGAAAAGTAT+AGG | 0.542789 | 1.3:-24972863 | None:intergenic |
| CTAGGTGAAGCTCCTGGAGG+GGG | 0.546323 | 1.3:-24971206 | None:intergenic |
| TTTGCCCATTGAAGTGGAAG+CGG | 0.547122 | 1.3:-24972782 | None:intergenic |
| TATGTCGTTGCTGCATCCGC+AGG | 0.547513 | 1.3:+24971287 | MS.gene063235:CDS |
| GGAGTGATGGATCTGGTGGT+GGG | 0.547634 | 1.3:-24968927 | None:intergenic |
| TTGAGGAGTTTGATGATCAA+GGG | 0.550533 | 1.3:+24969930 | MS.gene063235:CDS |
| CCTTTCTCAACCCCATCACA+AGG | 0.553195 | 1.3:-24969842 | None:intergenic |
| GCGGGTTTGATTGAGATCTG+AGG | 0.554313 | 1.3:-24969147 | None:intergenic |
| AAAATCCCAAGAACAAAAGC+CGG | 0.554722 | 1.3:-24971324 | None:intergenic |
| TGCTAGGTGAAGCTCCTGGA+GGG | 0.558715 | 1.3:-24971208 | None:intergenic |
| ATCAGTACGAGGGATGGATC+GGG | 0.559211 | 1.3:-24969072 | None:intergenic |
| TCTCTAATCAACTTATGATG+TGG | 0.559996 | 1.3:-24969674 | None:intergenic |
| TTATGATATTGCCAATTCTG+AGG | 0.561353 | 1.3:+24970123 | MS.gene063235:CDS |
| CTGATGCTGAGCTCGGTGGA+GGG | 0.562706 | 1.3:+24971765 | MS.gene063235:CDS |
| TAGAGGAGTGATGGATCTGG+TGG | 0.564452 | 1.3:-24968931 | None:intergenic |
| ACAGTGATGAGCTTGAAGAT+AGG | 0.565463 | 1.3:+24969645 | MS.gene063235:CDS |
| CGACACTTGGAGAAGGGAGT+GGG | 0.566590 | 1.3:+24969798 | MS.gene063235:CDS |
| ACGAGATCCCATATAATCAA+AGG | 0.566955 | 1.3:-24973073 | None:intergenic |
| CAGCAATCTCTCCATATGCT+AGG | 0.569487 | 1.3:-24971224 | None:intergenic |
| GGGGTTGAGAAAGGGAAGAG+TGG | 0.571530 | 1.3:+24969851 | MS.gene063235:CDS |
| GTAAGCTCCTCAGAAGCTGA+AGG | 0.572150 | 1.3:+24972613 | MS.gene063235:CDS |
| CAGCATCAGTATTACTCACA+TGG | 0.576319 | 1.3:-24971751 | None:intergenic |
| ATAATACACAAGAGGAAGAA+GGG | 0.576913 | 1.3:+24969966 | MS.gene063235:CDS |
| CATATGCTAGGTGAAGCTCC+TGG | 0.579927 | 1.3:-24971212 | None:intergenic |
| TTTATCAAATACTGCTAATG+GGG | 0.584187 | 1.3:+24969262 | MS.gene063235:CDS |
| GAACAATAATAATACACAAG+AGG | 0.584555 | 1.3:+24969958 | MS.gene063235:CDS |
| GCTAGGTGAAGCTCCTGGAG+GGG | 0.584819 | 1.3:-24971207 | None:intergenic |
| AATCATGGTGATCCTTGTGA+TGG | 0.584969 | 1.3:+24969830 | MS.gene063235:CDS |
| GACTTTGTCATGGGTGTGTG+CGG | 0.585509 | 1.3:+24972931 | MS.gene063235:CDS |
| GATAATGGTTAAGGATTCGA+CGG | 0.585545 | 1.3:+24969700 | MS.gene063235:CDS |
| GTTAAGGATTCGACGGTGAA+GGG | 0.585630 | 1.3:+24969707 | MS.gene063235:CDS |
| TTCGATCAACGGAGACGCGG+CGG | 0.587240 | 1.3:-24969166 | None:intergenic |
| GTGAGTGGGTCCACGAGAAG+TGG | 0.587531 | 1.3:-24969030 | None:intergenic |
| TGGTTGGTTTGTTTCTGAAG+GGG | 0.588187 | 1.3:+24970060 | MS.gene063235:CDS |
| ATCATGGTGATCCTTGTGAT+GGG | 0.590414 | 1.3:+24969831 | MS.gene063235:CDS |
| AGGTCGAAGTGCTGTTCTAG+AGG | 0.591590 | 1.3:-24971393 | None:intergenic |
| CAAGAGATCGACCAGCTATG+TGG | 0.592941 | 1.3:+24973109 | MS.gene063235:CDS |
| TGCATAATGTGAGTGTGCAT+TGG | 0.593013 | 1.3:-24972881 | None:intergenic |
| ATTCGCGCTCAAGGTTCAGA+TGG | 0.593453 | 1.3:+24971251 | MS.gene063235:CDS |
| GGCGGCACCGGAGCGACGAG+TGG | 0.594394 | 1.3:-24968883 | None:intergenic |
| CAAGCAAGTTGGTGTTAATG+GGG | 0.595316 | 1.3:+24969565 | MS.gene063235:CDS |
| GAAGATGATAACAAGCAAGT+TGG | 0.597574 | 1.3:+24969554 | MS.gene063235:CDS |
| GGATTCGACGGTGAAGGGAA+AGG | 0.600551 | 1.3:+24969712 | MS.gene063235:CDS |
| AGTAATACTGATGCTGAGCT+CGG | 0.604573 | 1.3:+24971758 | MS.gene063235:CDS |
| TGAGGTGGTTAGAGGAGTGA+TGG | 0.606498 | 1.3:-24968940 | None:intergenic |
| AAAGCTTTCCAATTCGACAA+TGG | 0.607659 | 1.3:+24971362 | MS.gene063235:CDS |
| ATCTTAAGACCAATGCCGGA+TGG | 0.612717 | 1.3:-24972691 | None:intergenic |
| TCTACGATCAGTACGAGGGA+TGG | 0.614187 | 1.3:-24969078 | None:intergenic |
| CCTCGTAGATCCACTTCTCG+TGG | 0.614227 | 1.3:+24969020 | MS.gene063235:CDS |
| TCTTTCTCATCTCTCCCTAG+AGG | 0.618262 | 1.3:+24969110 | MS.gene063235:CDS |
| TTCGACGGTGAAGGGAAAGG+TGG | 0.623957 | 1.3:+24969715 | MS.gene063235:CDS |
| GATCCCATATAATCAAAGGA+AGG | 0.629205 | 1.3:-24973069 | None:intergenic |
| GAGAGAAGGGAGTTTGCGTG+AGG | 0.637352 | 1.3:-24968958 | None:intergenic |
| GCAGCAGTTTCACAAGTTTG+GGG | 0.641830 | 1.3:+24972901 | MS.gene063235:CDS |
| AGAATCTGCTGATAATAGGG+TGG | 0.650877 | 1.3:-24971450 | None:intergenic |
| GATGATCTACGATCAGTACG+AGG | 0.653133 | 1.3:-24969083 | None:intergenic |
| TGATATTGATATGGTGCTTG+AGG | 0.653724 | 1.3:+24969895 | MS.gene063235:CDS |
| AATACTGATGCTGAGCTCGG+TGG | 0.657440 | 1.3:+24971761 | MS.gene063235:CDS |
| TATCAGCAGATTCTAGACAA+TGG | 0.659458 | 1.3:+24971459 | MS.gene063235:CDS |
| CCTTTGCAGTGGAGAAATCG+AGG | 0.667679 | 1.3:+24971620 | MS.gene063235:CDS |
| ATGCTAGGTGAAGCTCCTGG+AGG | 0.668637 | 1.3:-24971209 | None:intergenic |
| TCAGAAGCTGAAGGAAACGA+TGG | 0.669483 | 1.3:+24972622 | MS.gene063235:CDS |
| CAGCAGATTCTAGACAATGG+TGG | 0.669584 | 1.3:+24971462 | MS.gene063235:CDS |
| GGTGGCGCCGTCGATGACGG+CGG | 0.670160 | 1.3:-24968901 | None:intergenic |
| GAAATAATGAGAGGTCCACA+TGG | 0.670913 | 1.3:-24971491 | None:intergenic |
| TGAGGCGGATGAGAAGCTTG+AGG | 0.671755 | 1.3:+24969913 | MS.gene063235:CDS |
| GAGATCGACCAGCTATGTGG+AGG | 0.672338 | 1.3:+24973112 | MS.gene063235:CDS |
| TATTGATATGGTGCTTGAGG+CGG | 0.676053 | 1.3:+24969898 | MS.gene063235:CDS |
| GGATTCCATTGTGTTGCCTG+CGG | 0.676759 | 1.3:-24971303 | None:intergenic |
| CAATATGTTGATAGAATCTG+TGG | 0.677364 | 1.3:-24972656 | None:intergenic |
| AATACTCTAGTCCTTTGCAG+TGG | 0.679801 | 1.3:+24971609 | MS.gene063235:CDS |
| CTACATGTAGAAATAATGAG+AGG | 0.680866 | 1.3:-24971500 | None:intergenic |
| CACGAGAAGTGGATCTACGA+GGG | 0.681435 | 1.3:-24969019 | None:intergenic |
| GGAACAGAAACCAAAGCTTG+AGG | 0.681880 | 1.3:-24971701 | None:intergenic |
| TGCATCCGCAGGCAACACAA+TGG | 0.685391 | 1.3:+24971298 | MS.gene063235:CDS |
| ATGATCTACGATCAGTACGA+GGG | 0.689471 | 1.3:-24969082 | None:intergenic |
| CAATGGTGGTATAAACCATG+TGG | 0.694373 | 1.3:+24971476 | MS.gene063235:CDS |
| CCACGAGAAGTGGATCTACG+AGG | 0.699697 | 1.3:-24969020 | None:intergenic |
| GATAGGGAACAGGATTGCTG+CGG | 0.700919 | 1.3:+24970036 | MS.gene063235:CDS |
| GGTCTTAAGATACCAAAACA+TGG | 0.703850 | 1.3:+24972703 | MS.gene063235:CDS |
| TCATGGTGATCCTTGTGATG+GGG | 0.706638 | 1.3:+24969832 | MS.gene063235:CDS |
| TGAGCAAGTCATGAGTTGGG+AGG | 0.720703 | 1.3:+24971562 | MS.gene063235:CDS |
| CTTAAGATACCAAAACATGG+TGG | 0.729335 | 1.3:+24972706 | MS.gene063235:CDS |
| TCTACATGTAGCTCACAGAG+AGG | 0.729650 | 1.3:+24971512 | MS.gene063235:CDS |
| GGGTTTGATTGAGATCTGAG+GGG | 0.736910 | 1.3:-24969145 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATTAATAATATAAA+TGG | + | chr1.3:24970876-24970895 | MS.gene063235:intron | 0.0% |
| !! | GATTATGATAATAATAATAA+TGG | + | chr1.3:24973003-24973022 | MS.gene063235:CDS | 10.0% |
| !!! | GATATCTTTTTATTTAATTT+TGG | + | chr1.3:24970171-24970190 | MS.gene063235:intron | 10.0% |
| !! | AAACCAAATTAAAATCTAAA+TGG | - | chr1.3:24971047-24971066 | None:intergenic | 15.0% |
| !! | AACCAAATTAAAATCTAAAT+GGG | - | chr1.3:24971046-24971065 | None:intergenic | 15.0% |
| !! | AATAGTAATAGTAATTGTAA+TGG | + | chr1.3:24969329-24969348 | MS.gene063235:CDS | 15.0% |
| !! | AATATATTAATAAACTATCG+TGG | - | chr1.3:24971110-24971129 | None:intergenic | 15.0% |
| !! | ATTAATATGTTTAGAGAATA+TGG | + | chr1.3:24970518-24970537 | MS.gene063235:intron | 15.0% |
| !! | CACTTTAATTAATTATGTAA+TGG | - | chr1.3:24972277-24972296 | None:intergenic | 15.0% |
| !! | AAAATTCAATCTTTATCCAA+TGG | + | chr1.3:24970394-24970413 | MS.gene063235:intron | 20.0% |
| !! | AATATATGCATGATAATTGA+AGG | - | chr1.3:24972516-24972535 | None:intergenic | 20.0% |
| !! | ATAATATAAATGGACATTTG+AGG | + | chr1.3:24970886-24970905 | MS.gene063235:intron | 20.0% |
| !! | ATATTCAAGATAAGATTTCT+GGG | + | chr1.3:24969498-24969517 | MS.gene063235:CDS | 20.0% |
| !! | GAACAATCAATTCTTTATAA+GGG | - | chr1.3:24970841-24970860 | None:intergenic | 20.0% |
| !! | TGAACAATCAATTCTTTATA+AGG | - | chr1.3:24970842-24970861 | None:intergenic | 20.0% |
| !! | TTCTCTAAACATATTAATCT+AGG | - | chr1.3:24970516-24970535 | None:intergenic | 20.0% |
| !! | TTGGTTAAAATGTATGAAAA+TGG | - | chr1.3:24972570-24972589 | None:intergenic | 20.0% |
| !! | TTGTAAATTTCTATTTCCAA+AGG | - | chr1.3:24972010-24972029 | None:intergenic | 20.0% |
| !!! | ATGATGATTATAGTTGATTT+TGG | + | chr1.3:24970219-24970238 | MS.gene063235:intron | 20.0% |
| !!! | TATGTGATCTTTAAGAATAA+AGG | + | chr1.3:24970252-24970271 | MS.gene063235:intron | 20.0% |
| !!! | TTTTTTTTCTGAAATGAGTT+AGG | + | chr1.3:24970576-24970595 | MS.gene063235:intron | 20.0% |
| ! | AAAAGATTTACCTACTATCA+AGG | - | chr1.3:24970466-24970485 | None:intergenic | 25.0% |
| ! | ACATAAATCATATCGAAAAG+CGG | - | chr1.3:24971082-24971101 | None:intergenic | 25.0% |
| ! | ACTTTATCAAATACTGCTAA+TGG | + | chr1.3:24969260-24969279 | MS.gene063235:CDS | 25.0% |
| ! | ATAATAATGGTCAGAATCTT+AGG | + | chr1.3:24973016-24973035 | MS.gene063235:CDS | 25.0% |
| ! | ATGAAGAGACATTAGATTAA+GGG | - | chr1.3:24970950-24970969 | None:intergenic | 25.0% |
| ! | CATCAACATTCACTTAAAAT+TGG | + | chr1.3:24970365-24970384 | MS.gene063235:intron | 25.0% |
| ! | CATCATTTACAACAAAATCA+AGG | - | chr1.3:24970202-24970221 | None:intergenic | 25.0% |
| ! | CTTTATCAAATACTGCTAAT+GGG | + | chr1.3:24969261-24969280 | MS.gene063235:CDS | 25.0% |
| ! | GAACAATAATAATACACAAG+AGG | + | chr1.3:24969958-24969977 | MS.gene063235:CDS | 25.0% |
| ! | GAATTTCTTCTGATGTTATT+TGG | - | chr1.3:24971422-24971441 | None:intergenic | 25.0% |
| ! | GATATTCAAGATAAGATTTC+TGG | + | chr1.3:24969497-24969516 | MS.gene063235:CDS | 25.0% |
| ! | TAATAATGGTCAGAATCTTA+GGG | + | chr1.3:24973017-24973036 | MS.gene063235:CDS | 25.0% |
| ! | TCAGGATGTAATATGAAATA+TGG | + | chr1.3:24970912-24970931 | MS.gene063235:intron | 25.0% |
| ! | TCTCTTCATCAAGATTATAA+GGG | + | chr1.3:24970961-24970980 | MS.gene063235:intron | 25.0% |
| ! | TCTTGACACTACATAAAAAT+TGG | + | chr1.3:24970321-24970340 | MS.gene063235:intron | 25.0% |
| ! | TTATAGATCAACTATCAACA+TGG | - | chr1.3:24971952-24971971 | None:intergenic | 25.0% |
| ! | TTTATCAAATACTGCTAATG+GGG | + | chr1.3:24969262-24969281 | MS.gene063235:CDS | 25.0% |
| !! | AAGAATAAAGGACCAAATTT+TGG | + | chr1.3:24970264-24970283 | MS.gene063235:intron | 25.0% |
| !! | AGAATAAAGGACCAAATTTT+GGG | + | chr1.3:24970265-24970284 | MS.gene063235:intron | 25.0% |
| !! | TCAAAAGTGTGATATTGATA+TGG | + | chr1.3:24969886-24969905 | MS.gene063235:CDS | 25.0% |
| !! | TGATACAACAATTTTCATTG+CGG | + | chr1.3:24972821-24972840 | MS.gene063235:CDS | 25.0% |
| !!! | AGTATAACTTTTGATTCATC+AGG | - | chr1.3:24969473-24969492 | None:intergenic | 25.0% |
| !!! | ATCATAAGTTGATTAGAGAT+AGG | + | chr1.3:24969678-24969697 | MS.gene063235:CDS | 25.0% |
| !!! | CTTTTAACTTTAAGCTGAAT+GGG | + | chr1.3:24970014-24970033 | MS.gene063235:CDS | 25.0% |
| !!! | GAAAAACTTGCTTTTTTAGA+GGG | + | chr1.3:24969386-24969405 | MS.gene063235:CDS | 25.0% |
| !!! | GTATAACTTTTGATTCATCA+GGG | - | chr1.3:24969472-24969491 | None:intergenic | 25.0% |
| !!! | TGAAAAACTTGCTTTTTTAG+AGG | + | chr1.3:24969385-24969404 | MS.gene063235:CDS | 25.0% |
| !!! | TGCCCATTTAGATTTTAATT+TGG | + | chr1.3:24971041-24971060 | MS.gene063235:intron | 25.0% |
| AAGAATTCAAGCCCAAAATT+TGG | - | chr1.3:24970279-24970298 | None:intergenic | 30.0% | |
| AATAATACACAAGAGGAAGA+AGG | + | chr1.3:24969965-24969984 | MS.gene063235:CDS | 30.0% | |
| ATAATACACAAGAGGAAGAA+GGG | + | chr1.3:24969966-24969985 | MS.gene063235:CDS | 30.0% | |
| ATAATACACAAGTTCTGTTG+TGG | + | chr1.3:24971925-24971944 | MS.gene063235:intron | 30.0% | |
| ATCACTCATAATTCCAACAT+CGG | + | chr1.3:24971984-24972003 | MS.gene063235:intron | 30.0% | |
| ATGCAAATCAAAAGATCAAC+CGG | - | chr1.3:24970667-24970686 | None:intergenic | 30.0% | |
| ATGCATGATAATTGAAGGTT+TGG | - | chr1.3:24972511-24972530 | None:intergenic | 30.0% | |
| ATTTACATCCCACAAAGTAA+TGG | - | chr1.3:24971672-24971691 | None:intergenic | 30.0% | |
| ATTTAGGCAATCTTAACCAT+TGG | - | chr1.3:24970413-24970432 | None:intergenic | 30.0% | |
| CACAGATTCTATCAACATAT+TGG | + | chr1.3:24972657-24972676 | MS.gene063235:CDS | 30.0% | |
| CACTCGTCTCAATATTAATT+TGG | - | chr1.3:24970808-24970827 | None:intergenic | 30.0% | |
| CTACATGTAGAAATAATGAG+AGG | - | chr1.3:24971503-24971522 | None:intergenic | 30.0% | |
| GATGAAGAGACATTAGATTA+AGG | - | chr1.3:24970951-24970970 | None:intergenic | 30.0% | |
| GATTTGCATGCTAAATATTG+AGG | + | chr1.3:24970678-24970697 | MS.gene063235:intron | 30.0% | |
| GTCTCTTCATCAAGATTATA+AGG | + | chr1.3:24970960-24970979 | MS.gene063235:intron | 30.0% | |
| GTTGATTAGAGATAGGATAA+TGG | + | chr1.3:24969685-24969704 | MS.gene063235:CDS | 30.0% | |
| TAAAAATTCGTCATGCTTTC+AGG | + | chr1.3:24971166-24971185 | MS.gene063235:intron | 30.0% | |
| TACCTACTATCAAGGATTAA+AGG | - | chr1.3:24970458-24970477 | None:intergenic | 30.0% | |
| TAGTTGTGTAAAAGCAACTT+TGG | + | chr1.3:24971899-24971918 | MS.gene063235:intron | 30.0% | |
| TCTCTAATCAACTTATGATG+TGG | - | chr1.3:24969677-24969696 | None:intergenic | 30.0% | |
| TGTTTAGAGAATATGGCATA+TGG | + | chr1.3:24970525-24970544 | MS.gene063235:intron | 30.0% | |
| TTATGATATTGCCAATTCTG+AGG | + | chr1.3:24970123-24970142 | MS.gene063235:CDS | 30.0% | |
| ! | AGGTCAGTTTGATTTAACAT+TGG | + | chr1.3:24971797-24971816 | MS.gene063235:intron | 30.0% |
| ! | ATAGTAGGTAAATCTTTTCC+TGG | + | chr1.3:24970468-24970487 | MS.gene063235:intron | 30.0% |
| ! | CAATATGTTGATAGAATCTG+TGG | - | chr1.3:24972659-24972678 | None:intergenic | 30.0% |
| ! | CATGTTCTTCTGGAAAATTT+AGG | - | chr1.3:24970429-24970448 | None:intergenic | 30.0% |
| ! | CTTCTGATGTTATTTGGTAA+AGG | - | chr1.3:24971416-24971435 | None:intergenic | 30.0% |
| ! | GAAAGATGATGATGCATTAA+GGG | + | chr1.3:24972981-24973000 | MS.gene063235:CDS | 30.0% |
| ! | TAGAGATAGGATAATGGTTA+AGG | + | chr1.3:24969691-24969710 | MS.gene063235:CDS | 30.0% |
| ! | TCTAGAATCTGCTGATAATA+GGG | - | chr1.3:24971456-24971475 | None:intergenic | 30.0% |
| ! | TGAAAGATGATGATGCATTA+AGG | + | chr1.3:24972980-24972999 | MS.gene063235:CDS | 30.0% |
| !! | AACTTGCTTGTTATCATCTT+CGG | - | chr1.3:24969555-24969574 | None:intergenic | 30.0% |
| !! | ATTTAAGTTGTGATTCACAC+TGG | + | chr1.3:24972237-24972256 | MS.gene063235:intron | 30.0% |
| !! | CATACATTTTAACCAACCTT+TGG | + | chr1.3:24972574-24972593 | MS.gene063235:intron | 30.0% |
| !! | TTCTCAGTTGATTTTCTGAT+GGG | - | chr1.3:24969215-24969234 | None:intergenic | 30.0% |
| !! | TTTCTCAGTTGATTTTCTGA+TGG | - | chr1.3:24969216-24969235 | None:intergenic | 30.0% |
| !! | TTTGGAATCTTTTCGATCAA+CGG | - | chr1.3:24969180-24969199 | None:intergenic | 30.0% |
| !!! | AAGCATGACGAATTTTTAGT+TGG | - | chr1.3:24971164-24971183 | None:intergenic | 30.0% |
| !!! | GCTTTTAACTTTAAGCTGAA+TGG | + | chr1.3:24970013-24970032 | MS.gene063235:CDS | 30.0% |
| AAAATCCCAAGAACAAAAGC+CGG | - | chr1.3:24971327-24971346 | None:intergenic | 35.0% | |
| AAAGCTTTCCAATTCGACAA+TGG | + | chr1.3:24971362-24971381 | MS.gene063235:CDS | 35.0% | |
| AACTTTAAGCTGAATGGGAT+AGG | + | chr1.3:24970019-24970038 | MS.gene063235:CDS | 35.0% | |
| AAGCTGAATCCATTACTTTG+TGG | + | chr1.3:24971660-24971679 | MS.gene063235:CDS | 35.0% | |
| AAGGCAATAACATGTTCTTC+TGG | - | chr1.3:24970439-24970458 | None:intergenic | 35.0% | |
| AATGCGAGTAGTTTGGTTAA+AGG | + | chr1.3:24969617-24969636 | MS.gene063235:CDS | 35.0% | |
| ACGAGATCCCATATAATCAA+AGG | - | chr1.3:24973076-24973095 | None:intergenic | 35.0% | |
| ACTTTAAGCTGAATGGGATA+GGG | + | chr1.3:24970020-24970039 | MS.gene063235:CDS | 35.0% | |
| AGCTGAATCCATTACTTTGT+GGG | + | chr1.3:24971661-24971680 | MS.gene063235:CDS | 35.0% | |
| AGTGGGAAAGTTTCAAATCA+TGG | + | chr1.3:24969815-24969834 | MS.gene063235:CDS | 35.0% | |
| ATCAATGATACTTAGAAGCC+AGG | - | chr1.3:24970489-24970508 | None:intergenic | 35.0% | |
| ATGACACCGAACTTAATAAC+AGG | - | chr1.3:24970644-24970663 | None:intergenic | 35.0% | |
| CATCATCATAATCCAAAGGT+TGG | - | chr1.3:24972589-24972608 | None:intergenic | 35.0% | |
| CATGCTAAATATTGAGGCAT+GGG | + | chr1.3:24970684-24970703 | MS.gene063235:intron | 35.0% | |
| CATTCAAAAGTAGAAGCTCA+AGG | - | chr1.3:24972184-24972203 | None:intergenic | 35.0% | |
| CTGAAATGAGTTAGGAGTTT+CGG | + | chr1.3:24970584-24970603 | MS.gene063235:intron | 35.0% | |
| CTTAAGATACCAAAACATGG+TGG | + | chr1.3:24972706-24972725 | MS.gene063235:CDS | 35.0% | |
| GAAGATGATAACAAGCAAGT+TGG | + | chr1.3:24969554-24969573 | MS.gene063235:CDS | 35.0% | |
| GATCCCATATAATCAAAGGA+AGG | - | chr1.3:24973072-24973091 | None:intergenic | 35.0% | |
| GGTAATTCTGACTTTGTCAT+GGG | + | chr1.3:24972922-24972941 | MS.gene063235:CDS | 35.0% | |
| GGTCTTAAGATACCAAAACA+TGG | + | chr1.3:24972703-24972722 | MS.gene063235:CDS | 35.0% | |
| TATCAGCAGATTCTAGACAA+TGG | + | chr1.3:24971459-24971478 | MS.gene063235:CDS | 35.0% | |
| TCAACCCCTGTTATTAAGTT+CGG | + | chr1.3:24970635-24970654 | MS.gene063235:intron | 35.0% | |
| TCTCTGTACAATTATATGCC+AGG | + | chr1.3:24971017-24971036 | MS.gene063235:intron | 35.0% | |
| TCTGCATCATCATAATCCAA+AGG | - | chr1.3:24972593-24972612 | None:intergenic | 35.0% | |
| TGAAATGAGTTAGGAGTTTC+GGG | + | chr1.3:24970585-24970604 | MS.gene063235:intron | 35.0% | |
| TGACACCGAACTTAATAACA+GGG | - | chr1.3:24970643-24970662 | None:intergenic | 35.0% | |
| TGATAATTGAAGGTTTGGCT+TGG | - | chr1.3:24972506-24972525 | None:intergenic | 35.0% | |
| TGATATTGATATGGTGCTTG+AGG | + | chr1.3:24969895-24969914 | MS.gene063235:CDS | 35.0% | |
| TGATGAAAATCCGATAGCTT+TGG | + | chr1.3:24969766-24969785 | MS.gene063235:CDS | 35.0% | |
| TGGCCTTCCTTTGATTATAT+GGG | + | chr1.3:24973066-24973085 | MS.gene063235:CDS | 35.0% | |
| TTGGTCCTGATGACTTATAT+TGG | + | chr1.3:24973046-24973065 | MS.gene063235:CDS | 35.0% | |
| ! | AGATTATAAGGGCATGAACT+TGG | + | chr1.3:24970972-24970991 | MS.gene063235:intron | 35.0% |
| ! | ATTTGTCGTCATCAGTGTTT+TGG | + | chr1.3:24972209-24972228 | MS.gene063235:intron | 35.0% |
| ! | CTAACCTTTTCAGCACTTTT+GGG | - | chr1.3:24969239-24969258 | None:intergenic | 35.0% |
| ! | GAAATTTTCTTGCCACCAAA+AGG | - | chr1.3:24971725-24971744 | None:intergenic | 35.0% |
| ! | GATAATGGTTAAGGATTCGA+CGG | + | chr1.3:24969700-24969719 | MS.gene063235:CDS | 35.0% |
| ! | GCTTTTACACAACTACATAC+AGG | - | chr1.3:24971894-24971913 | None:intergenic | 35.0% |
| ! | GTACAATCTATTTTCTCTCG+CGG | + | chr1.3:24972736-24972755 | MS.gene063235:CDS | 35.0% |
| ! | GTCTAGAATCTGCTGATAAT+AGG | - | chr1.3:24971457-24971476 | None:intergenic | 35.0% |
| ! | TCTAACCTTTTCAGCACTTT+TGG | - | chr1.3:24969240-24969259 | None:intergenic | 35.0% |
| ! | TGCCTTTAATCCTTGATAGT+AGG | + | chr1.3:24970453-24970472 | MS.gene063235:intron | 35.0% |
| ! | TTGAGGAGTTTGATGATCAA+GGG | + | chr1.3:24969930-24969949 | MS.gene063235:CDS | 35.0% |
| ! | TTGGCCTTCCTTTGATTATA+TGG | + | chr1.3:24973065-24973084 | MS.gene063235:CDS | 35.0% |
| !! | AACAAGCAAGTTGGTGTTAA+TGG | + | chr1.3:24969563-24969582 | MS.gene063235:CDS | 35.0% |
| !! | ACAAGCAAGTTGGTGTTAAT+GGG | + | chr1.3:24969564-24969583 | MS.gene063235:CDS | 35.0% |
| !! | AGATCACTGTTTCTGTAGTA+AGG | + | chr1.3:24972148-24972167 | MS.gene063235:intron | 35.0% |
| !! | ATGATGAAGTGTTGAGAGAA+GGG | - | chr1.3:24968974-24968993 | None:intergenic | 35.0% |
| !! | CTTGAGCTTCTACTTTTGAA+TGG | + | chr1.3:24972182-24972201 | MS.gene063235:intron | 35.0% |
| !! | TCTCAGTTGATTTTCTGATG+GGG | - | chr1.3:24969214-24969233 | None:intergenic | 35.0% |
| !! | TTATTAAGTTCGGTGTCATC+CGG | + | chr1.3:24970645-24970664 | MS.gene063235:intron | 35.0% |
| !!! | CAAATGAGTTGAGTTTTGAG+AGG | - | chr1.3:24972099-24972118 | None:intergenic | 35.0% |
| AAGCTGTTCCATTGTCGAAT+TGG | - | chr1.3:24971373-24971392 | None:intergenic | 40.0% | |
| AATACTCTAGTCCTTTGCAG+TGG | + | chr1.3:24971609-24971628 | MS.gene063235:CDS | 40.0% | |
| AATCATGGTGATCCTTGTGA+TGG | + | chr1.3:24969830-24969849 | MS.gene063235:CDS | 40.0% | |
| AATGGACATTTGAGGATGTC+AGG | + | chr1.3:24970894-24970913 | MS.gene063235:intron | 40.0% | |
| ACAGTGATGAGCTTGAAGAT+AGG | + | chr1.3:24969645-24969664 | MS.gene063235:CDS | 40.0% | |
| ACCAAACTACTCGCATTCAT+CGG | - | chr1.3:24969614-24969633 | None:intergenic | 40.0% | |
| AGAATCTGCTGATAATAGGG+TGG | - | chr1.3:24971453-24971472 | None:intergenic | 40.0% | |
| AGTAATACTGATGCTGAGCT+CGG | + | chr1.3:24971758-24971777 | MS.gene063235:CDS | 40.0% | |
| ATAATTCCAACATCGGCCTT+TGG | + | chr1.3:24971991-24972010 | MS.gene063235:intron | 40.0% | |
| ATCATGGTGATCCTTGTGAT+GGG | + | chr1.3:24969831-24969850 | MS.gene063235:CDS | 40.0% | |
| ATGATCTACGATCAGTACGA+GGG | - | chr1.3:24969085-24969104 | None:intergenic | 40.0% | |
| ATGCAGCAGTTTCACAAGTT+TGG | + | chr1.3:24972899-24972918 | MS.gene063235:CDS | 40.0% | |
| CAATGGTGGTATAAACCATG+TGG | + | chr1.3:24971476-24971495 | MS.gene063235:CDS | 40.0% | |
| CAGAATCTTAGGGAAGTTGT+TGG | + | chr1.3:24973027-24973046 | MS.gene063235:CDS | 40.0% | |
| CAGCATCAGTATTACTCACA+TGG | - | chr1.3:24971754-24971773 | None:intergenic | 40.0% | |
| CTCTTCTTGCAGACTTAACA+TGG | - | chr1.3:24970717-24970736 | None:intergenic | 40.0% | |
| GAAATAATGAGAGGTCCACA+TGG | - | chr1.3:24971494-24971513 | None:intergenic | 40.0% | |
| GAAGGCCAATATAAGTCATC+AGG | - | chr1.3:24973054-24973073 | None:intergenic | 40.0% | |
| GACACCGAACTTAATAACAG+GGG | - | chr1.3:24970642-24970661 | None:intergenic | 40.0% | |
| GAGTATTCCATAGCAACAAC+AGG | - | chr1.3:24971596-24971615 | None:intergenic | 40.0% | |
| GCATGCTAAATATTGAGGCA+TGG | + | chr1.3:24970683-24970702 | MS.gene063235:intron | 40.0% | |
| GCCAAAAACTCCAAAGCTAT+CGG | - | chr1.3:24969779-24969798 | None:intergenic | 40.0% | |
| GGGTAATTCTGACTTTGTCA+TGG | + | chr1.3:24972921-24972940 | MS.gene063235:CDS | 40.0% | |
| TAAAATCTAAATGGGCAGCC+TGG | - | chr1.3:24971038-24971057 | None:intergenic | 40.0% | |
| TATTGATATGGTGCTTGAGG+CGG | + | chr1.3:24969898-24969917 | MS.gene063235:CDS | 40.0% | |
| TCATATGCATCCTCAAGATG+AGG | - | chr1.3:24970778-24970797 | None:intergenic | 40.0% | |
| TCGTCAACAAACAAGCAAGA+AGG | - | chr1.3:24972034-24972053 | None:intergenic | 40.0% | |
| TCTTTATATATTCCCCCTCC+AGG | + | chr1.3:24971194-24971213 | MS.gene063235:CDS | 40.0% | |
| TGCAGCAGTTTCACAAGTTT+GGG | + | chr1.3:24972900-24972919 | MS.gene063235:CDS | 40.0% | |
| TGCATAATGTGAGTGTGCAT+TGG | - | chr1.3:24972884-24972903 | None:intergenic | 40.0% | |
| TGGTATCTTAAGACCAATGC+CGG | - | chr1.3:24972698-24972717 | None:intergenic | 40.0% | |
| TTCACTTAGTCCTCAAGCTT+TGG | + | chr1.3:24971691-24971710 | MS.gene063235:CDS | 40.0% | |
| ! | AAAGTTTTCGATGTTCGCGA+TGG | + | chr1.3:24971539-24971558 | MS.gene063235:CDS | 40.0% |
| ! | ACATTGACACCACCATGTTT+TGG | - | chr1.3:24972718-24972737 | None:intergenic | 40.0% |
| ! | CTTGAGGAGTTTGATGATCA+AGG | + | chr1.3:24969929-24969948 | MS.gene063235:CDS | 40.0% |
| ! | GATGGGGTTAGTGATTGATT+TGG | - | chr1.3:24969198-24969217 | None:intergenic | 40.0% |
| ! | TTGGTTTCTGTTCCTTTTGG+TGG | + | chr1.3:24971710-24971729 | MS.gene063235:CDS | 40.0% |
| !! | CAAGCAAGTTGGTGTTAATG+GGG | + | chr1.3:24969565-24969584 | MS.gene063235:CDS | 40.0% |
| !! | CTGGTTGGTTTGTTTCTGAA+GGG | + | chr1.3:24970059-24970078 | MS.gene063235:CDS | 40.0% |
| !! | GAAACCCAAAAGTGCTGAAA+AGG | + | chr1.3:24969232-24969251 | MS.gene063235:CDS | 40.0% |
| !! | GATGATGAAGTGTTGAGAGA+AGG | - | chr1.3:24968975-24968994 | None:intergenic | 40.0% |
| !! | GCTTTGGTTTCTGTTCCTTT+TGG | + | chr1.3:24971707-24971726 | MS.gene063235:CDS | 40.0% |
| !! | TAATTGAAGGTTTGGCTTGG+TGG | - | chr1.3:24972503-24972522 | None:intergenic | 40.0% |
| !! | TGGTTGGTTTGTTTCTGAAG+GGG | + | chr1.3:24970060-24970079 | MS.gene063235:CDS | 40.0% |
| !! | TTCTGGGATTGAGAAAGCTA+TGG | + | chr1.3:24969514-24969533 | MS.gene063235:CDS | 40.0% |
| !!! | TCCGATAGCTTTGGAGTTTT+TGG | + | chr1.3:24969775-24969794 | MS.gene063235:CDS | 40.0% |
| AGCACGCAATACCTCAGAAT+TGG | - | chr1.3:24970137-24970156 | None:intergenic | 45.0% | |
| ATCGTTTCCTTCAGCTTCTG+AGG | - | chr1.3:24972623-24972642 | None:intergenic | 45.0% | |
| ATCTTAAGACCAATGCCGGA+TGG | - | chr1.3:24972694-24972713 | None:intergenic | 45.0% | |
| ATGGTGAGCAAGTCATGAGT+TGG | + | chr1.3:24971558-24971577 | MS.gene063235:CDS | 45.0% | |
| ATTAGATGCCTCCACATAGC+TGG | - | chr1.3:24973123-24973142 | None:intergenic | 45.0% | |
| CAGCAATCTCTCCATATGCT+AGG | - | chr1.3:24971227-24971246 | None:intergenic | 45.0% | |
| CAGCAGATTCTAGACAATGG+TGG | + | chr1.3:24971462-24971481 | MS.gene063235:CDS | 45.0% | |
| CGGGTTTGATTGAGATCTGA+GGG | - | chr1.3:24969149-24969168 | None:intergenic | 45.0% | |
| CTAGCATATGGAGAGATTGC+TGG | + | chr1.3:24971225-24971244 | MS.gene063235:CDS | 45.0% | |
| CTATTTCCAAAGGCCGATGT+TGG | - | chr1.3:24972000-24972019 | None:intergenic | 45.0% | |
| GATGATCTACGATCAGTACG+AGG | - | chr1.3:24969086-24969105 | None:intergenic | 45.0% | |
| GCAGCAGTTTCACAAGTTTG+GGG | + | chr1.3:24972901-24972920 | MS.gene063235:CDS | 45.0% | |
| GGAACAGAAACCAAAGCTTG+AGG | - | chr1.3:24971704-24971723 | None:intergenic | 45.0% | |
| GGGTTTGATTGAGATCTGAG+GGG | - | chr1.3:24969148-24969167 | None:intergenic | 45.0% | |
| GTTAAGGATTCGACGGTGAA+GGG | + | chr1.3:24969707-24969726 | MS.gene063235:CDS | 45.0% | |
| TAGGGTTAGGGTTAGGGTTA+GGG | + | chr1.3:24969292-24969311 | MS.gene063235:CDS | 45.0% | |
| TAGTGCTAGGGTTAGGGTTA+GGG | + | chr1.3:24969286-24969305 | MS.gene063235:CDS | 45.0% | |
| TCAGAAGCCTGTTGTTGCTA+TGG | + | chr1.3:24971586-24971605 | MS.gene063235:CDS | 45.0% | |
| TCAGAAGCTGAAGGAAACGA+TGG | + | chr1.3:24972622-24972641 | MS.gene063235:CDS | 45.0% | |
| TCATGGTGATCCTTGTGATG+GGG | + | chr1.3:24969832-24969851 | MS.gene063235:CDS | 45.0% | |
| TCTACATGTAGCTCACAGAG+AGG | + | chr1.3:24971512-24971531 | MS.gene063235:CDS | 45.0% | |
| TCTTGCAGACTTAACATGGC+TGG | - | chr1.3:24970713-24970732 | None:intergenic | 45.0% | |
| TCTTTCTCATCTCTCCCTAG+AGG | + | chr1.3:24969110-24969129 | MS.gene063235:CDS | 45.0% | |
| TGCAGCAACGACATATCTTC+CGG | - | chr1.3:24971282-24971301 | None:intergenic | 45.0% | |
| TGCTGATAATAGGGTGGAAC+TGG | - | chr1.3:24971447-24971466 | None:intergenic | 45.0% | |
| TGGTGAGCAAGTCATGAGTT+GGG | + | chr1.3:24971559-24971578 | MS.gene063235:CDS | 45.0% | |
| TTTGCCCATTGAAGTGGAAG+CGG | - | chr1.3:24972785-24972804 | None:intergenic | 45.0% | |
| ! | CTGTCTTTTGCCCATTGAAG+TGG | - | chr1.3:24972791-24972810 | None:intergenic | 45.0% |
| ! | CTTGTGATGGGGTTGAGAAA+GGG | + | chr1.3:24969843-24969862 | MS.gene063235:CDS | 45.0% |
| ! | GGAATCCGGCTTTTGTTCTT+GGG | + | chr1.3:24971319-24971338 | MS.gene063235:CDS | 45.0% |
| ! | TGGAATCCGGCTTTTGTTCT+TGG | + | chr1.3:24971318-24971337 | MS.gene063235:CDS | 45.0% |
| ! | TTTTGGCGACACTTGGAGAA+GGG | + | chr1.3:24969792-24969811 | MS.gene063235:CDS | 45.0% |
| !! | GCTGGTTGGTTTGTTTCTGA+AGG | + | chr1.3:24970058-24970077 | MS.gene063235:CDS | 45.0% |
| !! | TTTTTGGCGACACTTGGAGA+AGG | + | chr1.3:24969791-24969810 | MS.gene063235:CDS | 45.0% |
| !!! | TTGGAGTTTTTGGCGACACT+TGG | + | chr1.3:24969785-24969804 | MS.gene063235:CDS | 45.0% |
| AATACTGATGCTGAGCTCGG+TGG | + | chr1.3:24971761-24971780 | MS.gene063235:CDS | 50.0% | |
| AGCTGAATGGGATAGGGAAC+AGG | + | chr1.3:24970026-24970045 | MS.gene063235:CDS | 50.0% | |
| AGTTTGCGTGAGGTGGTTAG+AGG | - | chr1.3:24968951-24968970 | None:intergenic | 50.0% | |
| ATCAGTACGAGGGATGGATC+GGG | - | chr1.3:24969075-24969094 | None:intergenic | 50.0% | |
| ATCCTCAAGATGAGGCAAGC+TGG | - | chr1.3:24970770-24970789 | None:intergenic | 50.0% | |
| ATGCACCGCTTCCACTTCAA+TGG | + | chr1.3:24972777-24972796 | MS.gene063235:CDS | 50.0% | |
| ATTCGCGCTCAAGGTTCAGA+TGG | + | chr1.3:24971251-24971270 | MS.gene063235:CDS | 50.0% | |
| CAAGAGATCGACCAGCTATG+TGG | + | chr1.3:24973109-24973128 | MS.gene063235:CDS | 50.0% | |
| CAAGGTTCAGATGGTTGCTC+CGG | + | chr1.3:24971260-24971279 | MS.gene063235:CDS | 50.0% | |
| CACGAGAAGTGGATCTACGA+GGG | - | chr1.3:24969022-24969041 | None:intergenic | 50.0% | |
| CAGGAGCTTCACCTAGCATA+TGG | + | chr1.3:24971213-24971232 | MS.gene063235:CDS | 50.0% | |
| CATATGCTAGGTGAAGCTCC+TGG | - | chr1.3:24971215-24971234 | None:intergenic | 50.0% | |
| CCTCGATTTCTCCACTGCAA+AGG | - | chr1.3:24971623-24971642 | None:intergenic | 50.0% | |
| CCTTTCTCAACCCCATCACA+AGG | - | chr1.3:24969845-24969864 | None:intergenic | 50.0% | |
| CCTTTGCAGTGGAGAAATCG+AGG | + | chr1.3:24971620-24971639 | MS.gene063235:CDS | 50.0% | |
| CTAGGGTTAGGGTTAGGGTT+AGG | + | chr1.3:24969291-24969310 | MS.gene063235:CDS | 50.0% | |
| CTAGTGCTAGGGTTAGGGTT+AGG | + | chr1.3:24969285-24969304 | MS.gene063235:CDS | 50.0% | |
| GACTTTGTCATGGGTGTGTG+CGG | + | chr1.3:24972931-24972950 | MS.gene063235:CDS | 50.0% | |
| GATAGGGAACAGGATTGCTG+CGG | + | chr1.3:24970036-24970055 | MS.gene063235:CDS | 50.0% | |
| GATCAGTACGAGGGATGGAT+CGG | - | chr1.3:24969076-24969095 | None:intergenic | 50.0% | |
| GCAGGCAACACAATGGAATC+CGG | + | chr1.3:24971305-24971324 | MS.gene063235:CDS | 50.0% | |
| GCCGATGAATGCGAGTAGTT+TGG | + | chr1.3:24969610-24969629 | MS.gene063235:CDS | 50.0% | |
| GCGGGTTTGATTGAGATCTG+AGG | - | chr1.3:24969150-24969169 | None:intergenic | 50.0% | |
| GGATTCCATTGTGTTGCCTG+CGG | - | chr1.3:24971306-24971325 | None:intergenic | 50.0% | |
| GGTTAAGGATTCGACGGTGA+AGG | + | chr1.3:24969706-24969725 | MS.gene063235:CDS | 50.0% | |
| GTAAGCTCCTCAGAAGCTGA+AGG | + | chr1.3:24972613-24972632 | MS.gene063235:CDS | 50.0% | |
| TAAGACCAATGCCGGATGGT+TGG | - | chr1.3:24972690-24972709 | None:intergenic | 50.0% | |
| TACCAGCTTGCCTCATCTTG+AGG | + | chr1.3:24970765-24970784 | MS.gene063235:intron | 50.0% | |
| TCTACGATCAGTACGAGGGA+TGG | - | chr1.3:24969081-24969100 | None:intergenic | 50.0% | |
| TGAGGTGGTTAGAGGAGTGA+TGG | - | chr1.3:24968943-24968962 | None:intergenic | 50.0% | |
| TGATTGAGATCTGAGGGGCT+AGG | - | chr1.3:24969143-24969162 | None:intergenic | 50.0% | |
| TGCACCGCTTCCACTTCAAT+GGG | + | chr1.3:24972778-24972797 | MS.gene063235:CDS | 50.0% | |
| TTGGACTTTCGCCAACCATC+CGG | + | chr1.3:24972676-24972695 | MS.gene063235:CDS | 50.0% | |
| ! | CCTTGTGATGGGGTTGAGAA+AGG | + | chr1.3:24969842-24969861 | MS.gene063235:CDS | 50.0% |
| ! | CTTTTCGATCAACGGAGACG+CGG | - | chr1.3:24969172-24969191 | None:intergenic | 50.0% |
| ! | GGATCGGGTTAAGGGCTTTT+GGG | - | chr1.3:24969060-24969079 | None:intergenic | 50.0% |
| ! | TGAGCAAGTCATGAGTTGGG+AGG | + | chr1.3:24971562-24971581 | MS.gene063235:CDS | 50.0% |
| ! | TGCTAATGGGGCTAGTGCTA+GGG | + | chr1.3:24969274-24969293 | MS.gene063235:CDS | 50.0% |
| ! | TGGATCGGGTTAAGGGCTTT+TGG | - | chr1.3:24969061-24969080 | None:intergenic | 50.0% |
| !! | AGGTCGAAGTGCTGTTCTAG+AGG | - | chr1.3:24971396-24971415 | None:intergenic | 50.0% |
| !! | GGGTTAAGGGCTTTTGGGTA+GGG | - | chr1.3:24969055-24969074 | None:intergenic | 50.0% |
| !! | GGTTAGAGGAGTGATGGATC+TGG | - | chr1.3:24968937-24968956 | None:intergenic | 50.0% |
| !! | TAGAGGAGTGATGGATCTGG+TGG | - | chr1.3:24968934-24968953 | None:intergenic | 50.0% |
| AAGTGGAAGCGGTGCATCCA+AGG | - | chr1.3:24972774-24972793 | None:intergenic | 55.0% | |
| ACGAGGGATGGATCGGGTTA+AGG | - | chr1.3:24969069-24969088 | None:intergenic | 55.0% | |
| AGAAGGGAGTTTGCGTGAGG+TGG | - | chr1.3:24968958-24968977 | None:intergenic | 55.0% | |
| ATGCTAGGTGAAGCTCCTGG+AGG | - | chr1.3:24971212-24971231 | None:intergenic | 55.0% | |
| CCACGAGAAGTGGATCTACG+AGG | - | chr1.3:24969023-24969042 | None:intergenic | 55.0% | |
| CCTCGTAGATCCACTTCTCG+TGG | + | chr1.3:24969020-24969039 | MS.gene063235:CDS | 55.0% | |
| CGACACTTGGAGAAGGGAGT+GGG | + | chr1.3:24969798-24969817 | MS.gene063235:CDS | 55.0% | |
| CGAGGGATGGATCGGGTTAA+GGG | - | chr1.3:24969068-24969087 | None:intergenic | 55.0% | |
| GAGAGAAGGGAGTTTGCGTG+AGG | - | chr1.3:24968961-24968980 | None:intergenic | 55.0% | |
| GAGATCGACCAGCTATGTGG+AGG | + | chr1.3:24973112-24973131 | MS.gene063235:CDS | 55.0% | |
| GGATTCGACGGTGAAGGGAA+AGG | + | chr1.3:24969712-24969731 | MS.gene063235:CDS | 55.0% | |
| GGCTAGGACTTCTGCCTCTA+GGG | - | chr1.3:24969127-24969146 | None:intergenic | 55.0% | |
| GGGGTTGAGAAAGGGAAGAG+TGG | + | chr1.3:24969851-24969870 | MS.gene063235:CDS | 55.0% | |
| GTCATGGGTGTGTGCGGTTT+AGG | + | chr1.3:24972937-24972956 | MS.gene063235:CDS | 55.0% | |
| TATGTCGTTGCTGCATCCGC+AGG | + | chr1.3:24971287-24971306 | MS.gene063235:CDS | 55.0% | |
| TGAGGCGGATGAGAAGCTTG+AGG | + | chr1.3:24969913-24969932 | MS.gene063235:CDS | 55.0% | |
| TGCATCCGCAGGCAACACAA+TGG | + | chr1.3:24971298-24971317 | MS.gene063235:CDS | 55.0% | |
| TGCTAGGTGAAGCTCCTGGA+GGG | - | chr1.3:24971211-24971230 | None:intergenic | 55.0% | |
| TTCGACGGTGAAGGGAAAGG+TGG | + | chr1.3:24969715-24969734 | MS.gene063235:CDS | 55.0% | |
| TTTCGCCAACCATCCGGCAT+TGG | + | chr1.3:24972682-24972701 | MS.gene063235:CDS | 55.0% | |
| ! | ATGGGGCTAGTGCTAGGGTT+AGG | + | chr1.3:24969279-24969298 | MS.gene063235:CDS | 55.0% |
| ! | CTGCTAATGGGGCTAGTGCT+AGG | + | chr1.3:24969273-24969292 | MS.gene063235:CDS | 55.0% |
| ! | TGCTGGCTAATTCGCGCTCA+AGG | + | chr1.3:24971242-24971261 | MS.gene063235:CDS | 55.0% |
| ! | TGGGGCTAGTGCTAGGGTTA+GGG | + | chr1.3:24969280-24969299 | MS.gene063235:CDS | 55.0% |
| !! | AGGAGTGATGGATCTGGTGG+TGG | - | chr1.3:24968931-24968950 | None:intergenic | 55.0% |
| !! | CGGGTTAAGGGCTTTTGGGT+AGG | - | chr1.3:24969056-24969075 | None:intergenic | 55.0% |
| !! | GATGGATCTGGTGGTGGGTT+TGG | - | chr1.3:24968925-24968944 | None:intergenic | 55.0% |
| !! | GGAGTGATGGATCTGGTGGT+GGG | - | chr1.3:24968930-24968949 | None:intergenic | 55.0% |
| !! | GGCTTTTGGGTAGGGTGAGT+GGG | - | chr1.3:24969047-24969066 | None:intergenic | 55.0% |
| ACAGGATTGCTGCGGCTGGT+TGG | + | chr1.3:24970044-24970063 | MS.gene063235:CDS | 60.0% | |
| CGCGGCGATTCTGTCTTCCT+TGG | + | chr1.3:24972754-24972773 | MS.gene063235:CDS | 60.0% | |
| CTAGGTGAAGCTCCTGGAGG+GGG | - | chr1.3:24971209-24971228 | None:intergenic | 60.0% | |
| GCGACACTTGGAGAAGGGAG+TGG | + | chr1.3:24969797-24969816 | MS.gene063235:CDS | 60.0% | |
| GCTAGGTGAAGCTCCTGGAG+GGG | - | chr1.3:24971210-24971229 | None:intergenic | 60.0% | |
| GGGCTAGGACTTCTGCCTCT+AGG | - | chr1.3:24969128-24969147 | None:intergenic | 60.0% | |
| GTGAGTGGGTCCACGAGAAG+TGG | - | chr1.3:24969033-24969052 | None:intergenic | 60.0% | |
| TTCGATCAACGGAGACGCGG+CGG | - | chr1.3:24969169-24969188 | None:intergenic | 60.0% | |
| ! | ACTGATGCTGAGCTCGGTGG+AGG | + | chr1.3:24971764-24971783 | MS.gene063235:CDS | 60.0% |
| ! | CTGATGCTGAGCTCGGTGGA+GGG | + | chr1.3:24971765-24971784 | MS.gene063235:CDS | 60.0% |
| ! | TGATGCTGAGCTCGGTGGAG+GGG | + | chr1.3:24971766-24971785 | MS.gene063235:CDS | 60.0% |
| !! | GGATCTGGTGGTGGGTTTGG+TGG | - | chr1.3:24968922-24968941 | None:intergenic | 60.0% |
| !! | GGGCTTTTGGGTAGGGTGAG+TGG | - | chr1.3:24969048-24969067 | None:intergenic | 60.0% |
| !! | TTTGGTGGCGCCGTCGATGA+CGG | - | chr1.3:24968907-24968926 | None:intergenic | 60.0% |
| GGGAACAGGATTGCTGCGGC+TGG | + | chr1.3:24970040-24970059 | MS.gene063235:CDS | 65.0% | |
| TCGATCAACGGAGACGCGGC+GGG | - | chr1.3:24969168-24969187 | None:intergenic | 65.0% | |
| TCGGTGGAGGGGTTCGGAAG+AGG | + | chr1.3:24971777-24971796 | MS.gene063235:CDS | 65.0% | |
| ! | CTGAGCTCGGTGGAGGGGTT+CGG | + | chr1.3:24971771-24971790 | MS.gene063235:CDS | 65.0% |
| !! | TCCGGTGCCGCCGTCATCGA+CGG | + | chr1.3:24968894-24968913 | MS.gene063235:CDS | 70.0% |
| ! | GCCGTCGATGACGGCGGCAC+CGG | - | chr1.3:24968898-24968917 | None:intergenic | 75.0% |
| ! | GGTGGCGCCGTCGATGACGG+CGG | - | chr1.3:24968904-24968923 | None:intergenic | 75.0% |
| !! | GGCGGCACCGGAGCGACGAG+TGG | - | chr1.3:24968886-24968905 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 24968879 | 24973149 | 24968879 | ID=MS.gene063235 |
| chr1.3 | mRNA | 24968879 | 24973149 | 24968879 | ID=MS.gene063235.t1;Parent=MS.gene063235 |
| chr1.3 | exon | 24968879 | 24970144 | 24968879 | ID=MS.gene063235.t1.exon1;Parent=MS.gene063235.t1 |
| chr1.3 | CDS | 24968879 | 24970144 | 24968879 | ID=cds.MS.gene063235.t1;Parent=MS.gene063235.t1 |
| chr1.3 | exon | 24971188 | 24971798 | 24971188 | ID=MS.gene063235.t1.exon2;Parent=MS.gene063235.t1 |
| chr1.3 | CDS | 24971188 | 24971798 | 24971188 | ID=cds.MS.gene063235.t1;Parent=MS.gene063235.t1 |
| chr1.3 | exon | 24972612 | 24973149 | 24972612 | ID=MS.gene063235.t1.exon3;Parent=MS.gene063235.t1 |
| chr1.3 | CDS | 24972612 | 24973149 | 24972612 | ID=cds.MS.gene063235.t1;Parent=MS.gene063235.t1 |
| Gene Sequence |
| Protein sequence |
