Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28163.t1 | XP_003630125.1 | 99.4 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 7.10E-177 | 629.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28163.t1 | Q94AG6 | 78.5 | 316 | 62 | 1 | 1 | 310 | 1 | 316 | 1.3e-134 | 480.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28163.t1 | G7LBC1 | 99.4 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 5.1e-177 | 629.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene28163 | 0.829015 | 6.52E-55 | -1.69E-46 |
| MS.gene049351 | MS.gene28163 | 0.832188 | 1.09E-55 | -1.69E-46 |
| MS.gene049356 | MS.gene28163 | 0.815616 | 8.44E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene28163 | 0.806819 | 6.83E-50 | -1.69E-46 |
| MS.gene049389 | MS.gene28163 | 0.825424 | 4.72E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene28163 | 0.840769 | 7.12E-58 | -1.69E-46 |
| MS.gene049491 | MS.gene28163 | 0.855648 | 5.48E-62 | -1.69E-46 |
| MS.gene049614 | MS.gene28163 | 0.82721 | 1.77E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene28163 | 0.821489 | 3.93E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene28163 | 0.825159 | 5.46E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene28163 | 0.845081 | 5.07E-59 | -1.69E-46 |
| MS.gene050099 | MS.gene28163 | 0.86077 | 1.64E-63 | -1.69E-46 |
| MS.gene050128 | MS.gene28163 | 0.837238 | 5.85E-57 | -1.69E-46 |
| MS.gene050301 | MS.gene28163 | 0.903916 | 2.11E-79 | -1.69E-46 |
| MS.gene050397 | MS.gene28163 | 0.841289 | 5.20E-58 | -1.69E-46 |
| MS.gene050404 | MS.gene28163 | 0.830442 | 2.93E-55 | -1.69E-46 |
| MS.gene050406 | MS.gene28163 | 0.81973 | 9.96E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene28163 | 0.808842 | 2.54E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene28163 | 0.845346 | 4.30E-59 | -1.69E-46 |
| MS.gene050529 | MS.gene28163 | 0.869003 | 4.29E-66 | -1.69E-46 |
| MS.gene050670 | MS.gene28163 | 0.821302 | 4.34E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene28163 | 0.822938 | 1.81E-53 | -1.69E-46 |
| MS.gene050770 | MS.gene28163 | 0.828731 | 7.64E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene28163 | 0.854039 | 1.60E-61 | -1.69E-46 |
| MS.gene05101 | MS.gene28163 | 0.867231 | 1.59E-65 | -1.69E-46 |
| MS.gene05105 | MS.gene28163 | 0.842681 | 2.23E-58 | -1.69E-46 |
| MS.gene051471 | MS.gene28163 | 0.86133 | 1.11E-63 | -1.69E-46 |
| MS.gene051605 | MS.gene28163 | 0.806851 | 6.73E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene28163 | 0.808471 | 3.05E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene28163 | 0.808993 | 2.36E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene28163 | 0.800759 | 1.24E-48 | -1.69E-46 |
| MS.gene052078 | MS.gene28163 | 0.858793 | 6.45E-63 | -1.69E-46 |
| MS.gene052178 | MS.gene28163 | 0.864084 | 1.57E-64 | -1.69E-46 |
| MS.gene052188 | MS.gene28163 | 0.906606 | 1.24E-80 | -1.69E-46 |
| MS.gene052253 | MS.gene28163 | 0.834993 | 2.17E-56 | -1.69E-46 |
| MS.gene052287 | MS.gene28163 | 0.80441 | 2.19E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene28163 | 0.88661 | 2.94E-72 | -1.69E-46 |
| MS.gene052322 | MS.gene28163 | 0.804735 | 1.87E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene28163 | 0.83051 | 2.82E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene28163 | 0.879894 | 8.58E-70 | -1.69E-46 |
| MS.gene052485 | MS.gene28163 | 0.830824 | 2.36E-55 | -1.69E-46 |
| MS.gene05316 | MS.gene28163 | 0.812575 | 3.96E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene28163 | 0.85712 | 2.03E-62 | -1.69E-46 |
| MS.gene053557 | MS.gene28163 | 0.89237 | 1.69E-74 | -1.69E-46 |
| MS.gene053758 | MS.gene28163 | 0.812064 | 5.12E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene28163 | 0.832974 | 6.96E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene28163 | 0.826453 | 2.69E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene28163 | 0.804165 | 2.46E-49 | -1.69E-46 |
| MS.gene054012 | MS.gene28163 | 0.804548 | 2.05E-49 | -1.69E-46 |
| MS.gene054013 | MS.gene28163 | 0.805527 | 1.28E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene28163 | 0.847819 | 9.09E-60 | -1.69E-46 |
| MS.gene054349 | MS.gene28163 | 0.823401 | 1.41E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene28163 | 0.837991 | 3.75E-57 | -1.69E-46 |
| MS.gene05455 | MS.gene28163 | 0.823186 | 1.59E-53 | -1.69E-46 |
| MS.gene054955 | MS.gene28163 | 0.816046 | 6.77E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene28163 | 0.864266 | 1.38E-64 | -1.69E-46 |
| MS.gene055277 | MS.gene28163 | 0.864844 | 9.07E-65 | -1.69E-46 |
| MS.gene055390 | MS.gene28163 | 0.849932 | 2.35E-60 | -1.69E-46 |
| MS.gene055412 | MS.gene28163 | 0.818381 | 2.02E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene28163 | 0.866331 | 3.08E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene28163 | 0.83735 | 5.47E-57 | -1.69E-46 |
| MS.gene055604 | MS.gene28163 | 0.809084 | 2.25E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene28163 | 0.833256 | 5.92E-56 | -1.69E-46 |
| MS.gene056314 | MS.gene28163 | 0.82842 | 9.08E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene28163 | 0.822854 | 1.90E-53 | -1.69E-46 |
| MS.gene056410 | MS.gene28163 | 0.84523 | 4.62E-59 | -1.69E-46 |
| MS.gene056609 | MS.gene28163 | 0.856126 | 3.97E-62 | -1.69E-46 |
| MS.gene056612 | MS.gene28163 | 0.853978 | 1.67E-61 | -1.69E-46 |
| MS.gene056659 | MS.gene28163 | 0.833369 | 5.55E-56 | -1.69E-46 |
| MS.gene056719 | MS.gene28163 | 0.820219 | 7.70E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene28163 | 0.850244 | 1.93E-60 | -1.69E-46 |
| MS.gene056897 | MS.gene28163 | 0.82399 | 1.03E-53 | -1.69E-46 |
| MS.gene05702 | MS.gene28163 | 0.84299 | 1.85E-58 | -1.69E-46 |
| MS.gene057121 | MS.gene28163 | 0.816986 | 4.17E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene28163 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene057295 | MS.gene28163 | 0.803496 | 3.39E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene28163 | 0.835933 | 1.26E-56 | -1.69E-46 |
| MS.gene057396 | MS.gene28163 | 0.82208 | 2.87E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene28163 | 0.829338 | 5.44E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene28163 | 0.82691 | 2.09E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene28163 | 0.833144 | 6.31E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene28163 | 0.807293 | 5.43E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene28163 | 0.814971 | 1.17E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene28163 | 0.80575 | 1.15E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene28163 | 0.872714 | 2.57E-67 | -1.69E-46 |
| MS.gene058007 | MS.gene28163 | 0.808904 | 2.46E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene28163 | 0.865618 | 5.18E-65 | -1.69E-46 |
| MS.gene05811 | MS.gene28163 | 0.902432 | 9.75E-79 | -1.69E-46 |
| MS.gene058142 | MS.gene28163 | 0.842184 | 3.02E-58 | -1.69E-46 |
| MS.gene058233 | MS.gene28163 | 0.831242 | 1.87E-55 | -1.69E-46 |
| MS.gene058276 | MS.gene28163 | 0.842198 | 2.99E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene28163 | 0.840065 | 1.09E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene28163 | 0.845142 | 4.88E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene28163 | 0.87188 | 4.88E-67 | -1.69E-46 |
| MS.gene058748 | MS.gene28163 | 0.800731 | 1.26E-48 | -1.69E-46 |
| MS.gene058787 | MS.gene28163 | 0.829575 | 4.77E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene28163 | 0.853223 | 2.76E-61 | -1.69E-46 |
| MS.gene058928 | MS.gene28163 | 0.846881 | 1.64E-59 | -1.69E-46 |
| MS.gene058993 | MS.gene28163 | 0.800758 | 1.24E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene28163 | 0.878694 | 2.28E-69 | -1.69E-46 |
| MS.gene059285 | MS.gene28163 | 0.805276 | 1.44E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene28163 | 0.845627 | 3.61E-59 | -1.69E-46 |
| MS.gene059326 | MS.gene28163 | 0.804134 | 2.50E-49 | -1.69E-46 |
| MS.gene059342 | MS.gene28163 | 0.838474 | 2.81E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene28163 | 0.827216 | 1.77E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene28163 | 0.859537 | 3.86E-63 | -1.69E-46 |
| MS.gene059536 | MS.gene28163 | 0.827999 | 1.15E-54 | -1.69E-46 |
| MS.gene059597 | MS.gene28163 | 0.879077 | 1.67E-69 | -1.69E-46 |
| MS.gene05959 | MS.gene28163 | 0.851172 | 1.05E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene28163 | 0.873408 | 1.50E-67 | -1.69E-46 |
| MS.gene059688 | MS.gene28163 | 0.875606 | 2.70E-68 | -1.69E-46 |
| MS.gene059692 | MS.gene28163 | 0.880914 | 3.70E-70 | -1.69E-46 |
| MS.gene059695 | MS.gene28163 | 0.882833 | 7.48E-71 | -1.69E-46 |
| MS.gene059708 | MS.gene28163 | 0.828201 | 1.03E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene28163 | 0.867462 | 1.34E-65 | -1.69E-46 |
| MS.gene059894 | MS.gene28163 | 0.878914 | 1.91E-69 | -1.69E-46 |
| MS.gene059960 | MS.gene28163 | 0.837029 | 6.61E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene28163 | 0.838403 | 2.94E-57 | -1.69E-46 |
| MS.gene060005 | MS.gene28163 | 0.806223 | 9.13E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene28163 | 0.8364 | 9.57E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene28163 | 0.854953 | 8.73E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene28163 | 0.805822 | 1.11E-49 | -1.69E-46 |
| MS.gene060818 | MS.gene28163 | 0.813861 | 2.07E-51 | -1.69E-46 |
| MS.gene06090 | MS.gene28163 | 0.831742 | 1.41E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene28163 | 0.866347 | 3.05E-65 | -1.69E-46 |
| MS.gene061051 | MS.gene28163 | -0.822861 | 1.89E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene28163 | 0.820477 | 6.72E-53 | -1.69E-46 |
| MS.gene061159 | MS.gene28163 | 0.81192 | 5.50E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene28163 | 0.810115 | 1.35E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030289 | MS.gene28163 | PPI |
| MS.gene064043 | MS.gene28163 | PPI |
| MS.gene28163 | MS.gene074632 | PPI |
| MS.gene064047 | MS.gene28163 | PPI |
| MS.gene074631 | MS.gene28163 | PPI |
| MS.gene75068 | MS.gene28163 | PPI |
| MS.gene66338 | MS.gene28163 | PPI |
| MS.gene064041 | MS.gene28163 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28163.t1 | MTR_8g092080 | 99.381 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 0.0 | 650 |
| MS.gene28163.t1 | MTR_1g097890 | 71.080 | 287 | 81 | 2 | 31 | 316 | 29 | 314 | 4.20e-152 | 429 |
| MS.gene28163.t1 | MTR_8g098240 | 33.208 | 265 | 161 | 4 | 50 | 299 | 318 | 581 | 1.66e-41 | 152 |
| MS.gene28163.t1 | MTR_3g025800 | 30.747 | 348 | 187 | 7 | 32 | 325 | 5 | 352 | 8.64e-39 | 140 |
| MS.gene28163.t1 | MTR_6g034515 | 35.616 | 292 | 149 | 8 | 29 | 285 | 34 | 321 | 7.19e-37 | 135 |
| MS.gene28163.t1 | MTR_5g073040 | 31.959 | 291 | 156 | 9 | 49 | 307 | 36 | 316 | 4.93e-33 | 124 |
| MS.gene28163.t1 | MTR_5g073040 | 29.688 | 192 | 124 | 4 | 125 | 310 | 31 | 217 | 2.75e-16 | 78.6 |
| MS.gene28163.t1 | MTR_1g095780 | 30.483 | 269 | 169 | 4 | 47 | 303 | 520 | 782 | 3.80e-32 | 127 |
| MS.gene28163.t1 | MTR_7g109135 | 31.164 | 292 | 164 | 9 | 54 | 311 | 24 | 312 | 6.32e-26 | 105 |
| MS.gene28163.t1 | MTR_4g012850 | 30.714 | 280 | 156 | 11 | 55 | 305 | 22 | 292 | 1.04e-23 | 99.4 |
| MS.gene28163.t1 | MTR_7g015870 | 31.081 | 296 | 164 | 9 | 46 | 304 | 21 | 313 | 2.26e-23 | 98.6 |
| MS.gene28163.t1 | MTR_7g109135 | 30.175 | 285 | 169 | 8 | 54 | 311 | 24 | 305 | 2.78e-23 | 98.2 |
| MS.gene28163.t1 | MTR_1g087840 | 29.433 | 282 | 162 | 7 | 64 | 311 | 31 | 309 | 4.37e-23 | 97.8 |
| MS.gene28163.t1 | MTR_7g015870 | 30.952 | 294 | 160 | 10 | 27 | 283 | 1 | 288 | 5.89e-23 | 97.8 |
| MS.gene28163.t1 | MTR_1g012030 | 27.206 | 272 | 180 | 5 | 52 | 305 | 139 | 410 | 7.71e-22 | 95.5 |
| MS.gene28163.t1 | MTR_4g114320 | 27.076 | 277 | 182 | 6 | 52 | 309 | 123 | 398 | 9.43e-22 | 95.1 |
| MS.gene28163.t1 | MTR_3g107510 | 26.374 | 273 | 183 | 5 | 54 | 308 | 124 | 396 | 1.11e-21 | 95.1 |
| MS.gene28163.t1 | MTR_3g107510 | 30.286 | 175 | 103 | 3 | 52 | 207 | 216 | 390 | 3.30e-14 | 73.2 |
| MS.gene28163.t1 | MTR_3g107510 | 29.747 | 158 | 106 | 3 | 133 | 287 | 122 | 277 | 1.56e-13 | 71.2 |
| MS.gene28163.t1 | MTR_6g015860 | 29.553 | 291 | 165 | 10 | 54 | 307 | 21 | 308 | 5.02e-21 | 92.0 |
| MS.gene28163.t1 | MTR_7g084400 | 28.014 | 282 | 172 | 6 | 49 | 305 | 210 | 485 | 1.62e-20 | 92.4 |
| MS.gene28163.t1 | MTR_4g057850 | 30.847 | 295 | 155 | 11 | 53 | 309 | 23 | 306 | 2.13e-20 | 90.1 |
| MS.gene28163.t1 | MTR_7g109135 | 31.224 | 237 | 145 | 7 | 90 | 311 | 1 | 234 | 2.31e-20 | 88.6 |
| MS.gene28163.t1 | MTR_8g027975 | 26.506 | 332 | 192 | 9 | 1 | 282 | 1 | 330 | 5.91e-20 | 89.7 |
| MS.gene28163.t1 | MTR_8g027975 | 28.125 | 192 | 124 | 3 | 133 | 310 | 51 | 242 | 1.08e-17 | 83.2 |
| MS.gene28163.t1 | MTR_8g096050 | 29.032 | 279 | 168 | 7 | 53 | 305 | 228 | 502 | 6.51e-20 | 90.5 |
| MS.gene28163.t1 | MTR_7g066690 | 28.470 | 281 | 158 | 8 | 63 | 307 | 28 | 301 | 1.21e-19 | 87.8 |
| MS.gene28163.t1 | MTR_5g009500 | 26.316 | 342 | 198 | 9 | 11 | 305 | 4 | 338 | 1.39e-19 | 88.6 |
| MS.gene28163.t1 | MTR_5g009500 | 29.293 | 198 | 126 | 3 | 127 | 310 | 32 | 229 | 3.44e-18 | 84.3 |
| MS.gene28163.t1 | MTR_5g055410 | 30.851 | 282 | 156 | 10 | 64 | 310 | 33 | 310 | 3.24e-19 | 87.4 |
| MS.gene28163.t1 | MTR_4g005330 | 26.852 | 324 | 190 | 11 | 26 | 309 | 41 | 357 | 6.42e-19 | 86.7 |
| MS.gene28163.t1 | MTR_8g019480 | 26.797 | 306 | 166 | 9 | 62 | 309 | 43 | 348 | 1.02e-18 | 85.9 |
| MS.gene28163.t1 | MTR_8g076760 | 28.723 | 282 | 155 | 7 | 66 | 305 | 28 | 305 | 1.03e-18 | 85.5 |
| MS.gene28163.t1 | MTR_8g076760 | 28.824 | 170 | 109 | 3 | 149 | 307 | 30 | 198 | 8.94e-14 | 71.2 |
| MS.gene28163.t1 | MTR_2g102010 | 30.196 | 255 | 143 | 8 | 55 | 281 | 23 | 270 | 1.60e-18 | 84.7 |
| MS.gene28163.t1 | MTR_4g005330 | 26.599 | 297 | 172 | 10 | 53 | 309 | 1 | 291 | 2.50e-18 | 84.0 |
| MS.gene28163.t1 | MTR_4g018750 | 27.143 | 280 | 157 | 8 | 63 | 304 | 26 | 296 | 9.24e-18 | 82.8 |
| MS.gene28163.t1 | MTR_3g098460 | 26.619 | 278 | 176 | 6 | 53 | 305 | 206 | 480 | 1.95e-17 | 83.2 |
| MS.gene28163.t1 | MTR_3g098460 | 28.492 | 179 | 105 | 4 | 52 | 207 | 299 | 477 | 2.10e-13 | 70.9 |
| MS.gene28163.t1 | MTR_1g088995 | 27.240 | 279 | 173 | 8 | 28 | 279 | 6 | 281 | 7.66e-17 | 80.1 |
| MS.gene28163.t1 | MTR_7g109135 | 31.250 | 176 | 106 | 5 | 149 | 311 | 40 | 213 | 1.86e-16 | 77.4 |
| MS.gene28163.t1 | MTR_2g032610 | 25.092 | 271 | 166 | 8 | 66 | 299 | 43 | 313 | 4.11e-16 | 78.2 |
| MS.gene28163.t1 | MTR_6g091800 | 32.178 | 202 | 118 | 6 | 125 | 307 | 10 | 211 | 2.16e-15 | 75.5 |
| MS.gene28163.t1 | MTR_6g091800 | 32.178 | 202 | 118 | 6 | 125 | 307 | 10 | 211 | 2.54e-15 | 75.1 |
| MS.gene28163.t1 | MTR_6g091800 | 32.178 | 202 | 118 | 6 | 125 | 307 | 10 | 211 | 3.08e-15 | 75.5 |
| MS.gene28163.t1 | MTR_6g091800 | 21.086 | 313 | 199 | 7 | 34 | 305 | 1 | 306 | 6.44e-12 | 65.9 |
| MS.gene28163.t1 | MTR_6g091800 | 26.667 | 210 | 108 | 7 | 48 | 220 | 115 | 315 | 1.34e-11 | 64.7 |
| MS.gene28163.t1 | MTR_5g030530 | 30.500 | 200 | 108 | 5 | 38 | 207 | 95 | 293 | 6.80e-15 | 74.3 |
| MS.gene28163.t1 | MTR_5g030530 | 27.698 | 278 | 156 | 11 | 43 | 282 | 3 | 273 | 2.99e-13 | 69.7 |
| MS.gene28163.t1 | MTR_5g030530 | 29.064 | 203 | 125 | 4 | 133 | 316 | 8 | 210 | 1.44e-11 | 64.7 |
| MS.gene28163.t1 | MTR_7g064980 | 25.941 | 239 | 155 | 5 | 87 | 307 | 82 | 316 | 7.52e-15 | 74.3 |
| MS.gene28163.t1 | MTR_7g064980 | 28.966 | 145 | 97 | 2 | 172 | 310 | 76 | 220 | 3.53e-12 | 66.6 |
| MS.gene28163.t1 | MTR_7g064980 | 28.261 | 184 | 106 | 4 | 48 | 207 | 130 | 311 | 5.08e-12 | 66.2 |
| MS.gene28163.t1 | MTR_7g068340 | 24.481 | 241 | 173 | 6 | 87 | 324 | 142 | 376 | 1.89e-14 | 73.9 |
| MS.gene28163.t1 | MTR_7g068340 | 30.994 | 171 | 102 | 6 | 149 | 308 | 103 | 268 | 2.36e-12 | 67.4 |
| MS.gene28163.t1 | MTR_4g119770 | 23.780 | 328 | 185 | 9 | 39 | 305 | 2 | 325 | 3.61e-14 | 72.4 |
| MS.gene28163.t1 | MTR_3g104600 | 24.437 | 311 | 190 | 8 | 38 | 305 | 21 | 329 | 3.62e-14 | 72.8 |
| MS.gene28163.t1 | MTR_6g091800 | 33.143 | 175 | 98 | 6 | 125 | 280 | 10 | 184 | 5.09e-14 | 70.1 |
| MS.gene28163.t1 | MTR_4g088545 | 26.354 | 277 | 157 | 6 | 49 | 284 | 9 | 279 | 1.05e-13 | 70.9 |
| MS.gene28163.t1 | MTR_4g088545 | 26.531 | 196 | 128 | 4 | 128 | 308 | 7 | 201 | 1.65e-11 | 64.3 |
| MS.gene28163.t1 | MTR_3g104810 | 24.510 | 306 | 173 | 8 | 62 | 309 | 42 | 347 | 1.35e-13 | 70.9 |
| MS.gene28163.t1 | MTR_8g066975 | 28.826 | 281 | 149 | 10 | 43 | 282 | 3 | 273 | 2.19e-13 | 70.1 |
| MS.gene28163.t1 | MTR_8g066975 | 31.013 | 158 | 97 | 4 | 56 | 207 | 142 | 293 | 4.27e-12 | 66.2 |
| MS.gene28163.t1 | MTR_2g436930 | 22.045 | 313 | 178 | 7 | 54 | 305 | 17 | 324 | 4.97e-13 | 69.3 |
| MS.gene28163.t1 | MTR_5g081150 | 29.703 | 202 | 126 | 4 | 124 | 309 | 25 | 226 | 7.56e-13 | 67.8 |
| MS.gene28163.t1 | MTR_6g034145 | 31.410 | 156 | 93 | 3 | 166 | 307 | 2 | 157 | 7.87e-13 | 67.8 |
| MS.gene28163.t1 | MTR_5g081150 | 28.713 | 202 | 128 | 4 | 124 | 309 | 25 | 226 | 8.51e-13 | 67.8 |
| MS.gene28163.t1 | MTR_3g100570 | 23.548 | 310 | 178 | 7 | 53 | 307 | 7 | 312 | 1.02e-12 | 68.2 |
| MS.gene28163.t1 | MTR_6g092210 | 31.333 | 150 | 95 | 3 | 166 | 307 | 2 | 151 | 1.35e-12 | 67.0 |
| MS.gene28163.t1 | MTR_6g092210 | 27.941 | 204 | 107 | 7 | 48 | 220 | 61 | 255 | 4.21e-12 | 65.9 |
| MS.gene28163.t1 | MTR_5g081150 | 27.974 | 311 | 179 | 12 | 36 | 307 | 19 | 323 | 2.05e-12 | 67.4 |
| MS.gene28163.t1 | MTR_5g081150 | 28.713 | 202 | 128 | 4 | 124 | 309 | 25 | 226 | 2.47e-12 | 67.0 |
| MS.gene28163.t1 | MTR_3g462140 | 26.207 | 290 | 178 | 8 | 47 | 303 | 10 | 296 | 2.78e-12 | 66.6 |
| MS.gene28163.t1 | MTR_6g091800 | 28.761 | 226 | 118 | 6 | 125 | 307 | 10 | 235 | 2.98e-12 | 66.6 |
| MS.gene28163.t1 | MTR_2g436930 | 24.020 | 204 | 131 | 4 | 126 | 305 | 31 | 234 | 3.29e-12 | 65.9 |
| MS.gene28163.t1 | MTR_6g091800 | 28.761 | 226 | 118 | 6 | 125 | 307 | 10 | 235 | 4.14e-12 | 66.6 |
| MS.gene28163.t1 | MTR_6g091800 | 28.761 | 226 | 118 | 6 | 125 | 307 | 10 | 235 | 4.19e-12 | 66.2 |
| MS.gene28163.t1 | MTR_3g074490 | 26.804 | 194 | 136 | 4 | 132 | 323 | 115 | 304 | 5.20e-12 | 66.6 |
| MS.gene28163.t1 | MTR_6g091800 | 28.761 | 226 | 118 | 6 | 125 | 307 | 10 | 235 | 5.54e-12 | 65.9 |
| MS.gene28163.t1 | MTR_4g088545 | 26.531 | 196 | 128 | 4 | 128 | 308 | 7 | 201 | 8.67e-12 | 64.7 |
| MS.gene28163.t1 | MTR_4g088545 | 27.500 | 200 | 105 | 5 | 49 | 215 | 9 | 201 | 1.52e-11 | 63.9 |
| MS.gene28163.t1 | MTR_4g088545 | 26.531 | 196 | 128 | 4 | 128 | 308 | 7 | 201 | 1.15e-11 | 64.7 |
| MS.gene28163.t1 | MTR_4g088545 | 27.500 | 200 | 105 | 5 | 49 | 215 | 9 | 201 | 1.41e-11 | 64.3 |
| MS.gene28163.t1 | MTR_1g090330 | 22.603 | 292 | 166 | 7 | 58 | 304 | 20 | 296 | 2.85e-11 | 63.9 |
| MS.gene28163.t1 | MTR_5g081910 | 24.919 | 309 | 164 | 9 | 67 | 310 | 23 | 328 | 2.92e-11 | 63.9 |
| MS.gene28163.t1 | MTR_4g018750 | 25.101 | 247 | 138 | 8 | 63 | 271 | 26 | 263 | 6.72e-11 | 62.4 |
| MS.gene28163.t1 | MTR_4g016730 | 25.764 | 229 | 145 | 6 | 87 | 306 | 144 | 356 | 8.48e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28163.t1 | AT4G39460 | 79.114 | 316 | 60 | 2 | 1 | 310 | 1 | 316 | 5.02e-178 | 495 |
| MS.gene28163.t1 | AT4G39460 | 79.114 | 316 | 60 | 2 | 1 | 310 | 1 | 316 | 5.02e-178 | 495 |
| MS.gene28163.t1 | AT4G39460 | 79.114 | 316 | 60 | 2 | 1 | 310 | 1 | 316 | 5.02e-178 | 495 |
| MS.gene28163.t1 | AT1G34065 | 73.214 | 280 | 75 | 0 | 29 | 308 | 59 | 338 | 4.11e-154 | 436 |
| MS.gene28163.t1 | AT1G34065 | 73.214 | 280 | 75 | 0 | 29 | 308 | 52 | 331 | 9.60e-154 | 434 |
| MS.gene28163.t1 | AT4G11440 | 33.696 | 276 | 157 | 5 | 54 | 306 | 332 | 604 | 2.28e-41 | 152 |
| MS.gene28163.t1 | AT4G11440 | 33.696 | 276 | 157 | 5 | 54 | 306 | 332 | 604 | 2.28e-41 | 152 |
| MS.gene28163.t1 | AT1G74240 | 34.615 | 286 | 140 | 5 | 48 | 286 | 32 | 317 | 3.79e-39 | 142 |
| MS.gene28163.t1 | AT1G74240 | 35.075 | 268 | 127 | 5 | 66 | 286 | 2 | 269 | 9.47e-37 | 134 |
| MS.gene28163.t1 | AT5G42130 | 32.567 | 261 | 150 | 5 | 66 | 302 | 132 | 390 | 3.12e-35 | 132 |
| MS.gene28163.t1 | AT2G26360 | 30.476 | 315 | 181 | 5 | 16 | 293 | 51 | 364 | 2.33e-34 | 129 |
| MS.gene28163.t1 | AT1G07030 | 31.930 | 285 | 167 | 6 | 48 | 307 | 36 | 318 | 2.14e-32 | 123 |
| MS.gene28163.t1 | AT1G07030 | 30.366 | 191 | 124 | 4 | 125 | 310 | 32 | 218 | 1.50e-16 | 79.7 |
| MS.gene28163.t1 | AT2G35800 | 29.545 | 264 | 177 | 2 | 48 | 303 | 541 | 803 | 6.53e-32 | 126 |
| MS.gene28163.t1 | AT2G30160 | 31.944 | 288 | 166 | 9 | 48 | 307 | 38 | 323 | 1.32e-31 | 121 |
| MS.gene28163.t1 | AT2G30160 | 30.055 | 183 | 119 | 4 | 133 | 310 | 42 | 220 | 1.66e-14 | 73.6 |
| MS.gene28163.t1 | AT3G54110 | 29.617 | 287 | 157 | 8 | 58 | 307 | 21 | 299 | 3.99e-24 | 100 |
| MS.gene28163.t1 | AT4G32400 | 28.623 | 276 | 179 | 6 | 52 | 309 | 114 | 389 | 4.81e-24 | 101 |
| MS.gene28163.t1 | AT3G20240 | 27.491 | 291 | 169 | 8 | 53 | 305 | 53 | 339 | 2.56e-23 | 99.0 |
| MS.gene28163.t1 | AT5G26200 | 26.280 | 293 | 171 | 6 | 62 | 309 | 49 | 341 | 1.57e-20 | 91.3 |
| MS.gene28163.t1 | AT4G01100 | 26.101 | 318 | 186 | 7 | 37 | 305 | 27 | 344 | 3.82e-20 | 90.1 |
| MS.gene28163.t1 | AT4G01100 | 30.412 | 194 | 117 | 5 | 133 | 310 | 42 | 233 | 9.68e-17 | 80.5 |
| MS.gene28163.t1 | AT1G79900 | 28.571 | 266 | 168 | 8 | 67 | 314 | 31 | 292 | 4.37e-20 | 89.0 |
| MS.gene28163.t1 | AT5G58970 | 27.551 | 294 | 177 | 6 | 47 | 307 | 11 | 301 | 5.16e-20 | 89.0 |
| MS.gene28163.t1 | AT5G15640 | 28.889 | 315 | 181 | 10 | 30 | 306 | 11 | 320 | 1.31e-19 | 88.2 |
| MS.gene28163.t1 | AT5G15640 | 28.622 | 283 | 164 | 7 | 62 | 306 | 31 | 313 | 1.83e-19 | 87.8 |
| MS.gene28163.t1 | AT4G03115 | 28.030 | 264 | 163 | 6 | 40 | 279 | 23 | 283 | 3.53e-19 | 87.0 |
| MS.gene28163.t1 | AT4G03115 | 28.030 | 264 | 163 | 6 | 40 | 279 | 55 | 315 | 4.76e-19 | 87.0 |
| MS.gene28163.t1 | AT2G47490 | 28.169 | 284 | 166 | 9 | 64 | 313 | 29 | 308 | 6.51e-19 | 86.3 |
| MS.gene28163.t1 | AT4G01100 | 25.000 | 332 | 186 | 8 | 37 | 305 | 27 | 358 | 3.53e-17 | 81.6 |
| MS.gene28163.t1 | AT4G01100 | 27.670 | 206 | 121 | 4 | 133 | 310 | 42 | 247 | 1.74e-14 | 73.9 |
| MS.gene28163.t1 | AT5G09470 | 26.638 | 229 | 157 | 3 | 89 | 307 | 107 | 334 | 4.11e-17 | 81.3 |
| MS.gene28163.t1 | AT4G01100 | 26.877 | 253 | 151 | 5 | 87 | 305 | 42 | 294 | 5.86e-17 | 80.5 |
| MS.gene28163.t1 | AT4G01100 | 31.677 | 161 | 97 | 4 | 161 | 310 | 25 | 183 | 4.84e-16 | 77.8 |
| MS.gene28163.t1 | AT4G01100 | 28.205 | 195 | 99 | 5 | 54 | 207 | 97 | 291 | 3.99e-13 | 69.3 |
| MS.gene28163.t1 | AT2G37890 | 26.861 | 309 | 189 | 10 | 32 | 305 | 26 | 332 | 5.98e-17 | 80.9 |
| MS.gene28163.t1 | AT2G37890 | 30.348 | 201 | 124 | 4 | 127 | 311 | 39 | 239 | 3.37e-15 | 75.9 |
| MS.gene28163.t1 | AT5G66380 | 28.638 | 213 | 131 | 5 | 130 | 326 | 7 | 214 | 7.61e-17 | 80.1 |
| MS.gene28163.t1 | AT5G66380 | 27.063 | 303 | 181 | 8 | 49 | 313 | 7 | 307 | 3.23e-15 | 75.5 |
| MS.gene28163.t1 | AT5G51050 | 29.286 | 280 | 163 | 8 | 53 | 305 | 224 | 495 | 8.07e-17 | 81.3 |
| MS.gene28163.t1 | AT5G51050 | 29.545 | 176 | 103 | 6 | 52 | 207 | 318 | 492 | 1.58e-12 | 68.6 |
| MS.gene28163.t1 | AT4G03115 | 29.442 | 197 | 131 | 4 | 88 | 279 | 19 | 212 | 1.60e-16 | 78.2 |
| MS.gene28163.t1 | AT1G72820 | 25.828 | 302 | 170 | 8 | 62 | 309 | 41 | 342 | 1.88e-16 | 79.3 |
| MS.gene28163.t1 | AT1G72820 | 25.828 | 302 | 170 | 8 | 62 | 309 | 41 | 342 | 1.88e-16 | 79.3 |
| MS.gene28163.t1 | AT4G03115 | 29.442 | 197 | 131 | 4 | 88 | 279 | 27 | 220 | 2.04e-16 | 78.2 |
| MS.gene28163.t1 | AT1G25380 | 29.078 | 282 | 162 | 9 | 64 | 310 | 33 | 311 | 3.55e-16 | 79.0 |
| MS.gene28163.t1 | AT1G25380 | 29.078 | 282 | 162 | 9 | 64 | 310 | 33 | 311 | 3.55e-16 | 79.0 |
| MS.gene28163.t1 | AT5G01340 | 28.269 | 283 | 160 | 9 | 53 | 299 | 18 | 293 | 3.45e-15 | 75.5 |
| MS.gene28163.t1 | AT5G61810 | 28.520 | 277 | 168 | 8 | 52 | 306 | 208 | 476 | 1.33e-14 | 74.7 |
| MS.gene28163.t1 | AT5G61810 | 28.520 | 277 | 168 | 8 | 52 | 306 | 65 | 333 | 1.39e-14 | 73.9 |
| MS.gene28163.t1 | AT3G55640 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 2.65e-14 | 72.0 |
| MS.gene28163.t1 | AT3G55640 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 2.65e-14 | 72.0 |
| MS.gene28163.t1 | AT3G51870 | 25.103 | 243 | 171 | 7 | 87 | 325 | 146 | 381 | 3.92e-14 | 72.8 |
| MS.gene28163.t1 | AT3G51870 | 28.889 | 180 | 98 | 7 | 146 | 307 | 104 | 271 | 1.38e-11 | 65.5 |
| MS.gene28163.t1 | AT3G53940 | 26.102 | 295 | 176 | 10 | 50 | 306 | 71 | 361 | 4.24e-14 | 72.8 |
| MS.gene28163.t1 | AT3G53940 | 29.897 | 194 | 113 | 5 | 139 | 311 | 76 | 267 | 3.51e-13 | 70.1 |
| MS.gene28163.t1 | AT5G01500 | 27.027 | 222 | 154 | 5 | 87 | 306 | 174 | 389 | 6.13e-14 | 72.4 |
| MS.gene28163.t1 | AT5G01500 | 30.726 | 179 | 98 | 7 | 146 | 308 | 132 | 300 | 2.25e-11 | 64.7 |
| MS.gene28163.t1 | AT5G46800 | 28.315 | 279 | 156 | 8 | 43 | 282 | 3 | 276 | 8.44e-14 | 71.2 |
| MS.gene28163.t1 | AT5G46800 | 29.048 | 210 | 127 | 4 | 129 | 316 | 4 | 213 | 2.18e-12 | 67.0 |
| MS.gene28163.t1 | AT5G46800 | 28.315 | 279 | 156 | 8 | 43 | 282 | 3 | 276 | 8.44e-14 | 71.2 |
| MS.gene28163.t1 | AT5G46800 | 29.048 | 210 | 127 | 4 | 129 | 316 | 4 | 213 | 2.18e-12 | 67.0 |
| MS.gene28163.t1 | AT5G46800 | 28.315 | 279 | 156 | 8 | 43 | 282 | 3 | 276 | 8.44e-14 | 71.2 |
| MS.gene28163.t1 | AT5G46800 | 29.048 | 210 | 127 | 4 | 129 | 316 | 4 | 213 | 2.18e-12 | 67.0 |
| MS.gene28163.t1 | AT3G55640 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 1.00e-13 | 71.2 |
| MS.gene28163.t1 | AT3G55640 | 29.508 | 183 | 107 | 3 | 48 | 208 | 141 | 323 | 1.67e-12 | 67.8 |
| MS.gene28163.t1 | AT3G55640 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 1.00e-13 | 71.2 |
| MS.gene28163.t1 | AT3G55640 | 29.508 | 183 | 107 | 3 | 48 | 208 | 141 | 323 | 1.67e-12 | 67.8 |
| MS.gene28163.t1 | AT3G53940 | 29.798 | 198 | 116 | 5 | 139 | 315 | 76 | 271 | 1.16e-13 | 70.9 |
| MS.gene28163.t1 | AT2G33820 | 26.182 | 275 | 164 | 7 | 48 | 285 | 14 | 286 | 1.26e-13 | 70.9 |
| MS.gene28163.t1 | AT1G14140 | 25.436 | 287 | 180 | 7 | 52 | 306 | 16 | 300 | 1.30e-13 | 70.9 |
| MS.gene28163.t1 | AT4G26180 | 28.293 | 205 | 127 | 7 | 133 | 318 | 22 | 225 | 2.91e-13 | 69.7 |
| MS.gene28163.t1 | AT4G26180 | 23.322 | 283 | 176 | 6 | 37 | 280 | 4 | 284 | 6.32e-13 | 68.6 |
| MS.gene28163.t1 | AT4G26180 | 23.377 | 308 | 195 | 6 | 37 | 305 | 4 | 309 | 3.80e-13 | 69.7 |
| MS.gene28163.t1 | AT4G26180 | 28.293 | 205 | 127 | 7 | 133 | 318 | 22 | 225 | 3.95e-13 | 69.7 |
| MS.gene28163.t1 | AT2G33820 | 25.088 | 283 | 165 | 7 | 48 | 285 | 14 | 294 | 7.21e-13 | 68.6 |
| MS.gene28163.t1 | AT5G07320 | 27.239 | 268 | 167 | 6 | 60 | 306 | 217 | 477 | 7.94e-13 | 69.3 |
| MS.gene28163.t1 | AT5G07320 | 29.143 | 175 | 104 | 5 | 52 | 207 | 300 | 473 | 2.93e-12 | 67.8 |
| MS.gene28163.t1 | AT4G24570 | 25.991 | 227 | 158 | 2 | 90 | 307 | 87 | 312 | 1.37e-12 | 67.8 |
| MS.gene28163.t1 | AT3G21390 | 24.918 | 305 | 169 | 9 | 54 | 299 | 43 | 346 | 2.28e-12 | 67.4 |
| MS.gene28163.t1 | AT3G21390 | 24.918 | 305 | 169 | 9 | 54 | 299 | 21 | 324 | 2.50e-12 | 67.4 |
| MS.gene28163.t1 | AT1G14560 | 23.810 | 294 | 168 | 9 | 60 | 305 | 35 | 320 | 1.10e-11 | 65.5 |
| MS.gene28163.t1 | AT1G14560 | 27.700 | 213 | 106 | 8 | 52 | 221 | 25 | 232 | 2.43e-11 | 63.2 |
| MS.gene28163.t1 | AT5G64970 | 28.079 | 203 | 137 | 5 | 106 | 302 | 106 | 305 | 7.10e-11 | 63.2 |
Find 69 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAGCAATTTCTGCTTTGC+AGG | 0.223057 | 4.4:+9644172 | None:intergenic |
| TTATTGAAAGGCCTTTATTC+TGG | 0.225181 | 4.4:-9645337 | MS.gene28163:CDS |
| GATCCAGAAAATGCAATTAT+TGG | 0.242454 | 4.4:-9643018 | MS.gene28163:CDS |
| GCATCTAGGGAGGGCTTTAA+AGG | 0.249580 | 4.4:-9643625 | MS.gene28163:CDS |
| ATTCCCTTGTATTGGTTTGC+AGG | 0.276596 | 4.4:+9642156 | None:intergenic |
| TATATTTATTGCAGGGTATT+GGG | 0.281623 | 4.4:-9641924 | MS.gene28163:intron |
| GACTTCGTACGCACTTTATT+CGG | 0.292305 | 4.4:-9646496 | MS.gene28163:intron |
| TTGTGTTCAAACCATTATTA+AGG | 0.295101 | 4.4:-9642127 | MS.gene28163:CDS |
| CTGCAGCACTGAGCTAGTTT+AGG | 0.298289 | 4.4:+9641811 | None:intergenic |
| TTATATTTATTGCAGGGTAT+TGG | 0.325821 | 4.4:-9641925 | MS.gene28163:intron |
| ATAGGTGGTTCAATATTCTT+TGG | 0.340105 | 4.4:-9641880 | MS.gene28163:CDS |
| CTCTATGAGCAGATTCGTTT+AGG | 0.342765 | 4.4:-9643429 | MS.gene28163:CDS |
| GGATTGGCAGGGAACCTTGC+TGG | 0.346162 | 4.4:-9645316 | MS.gene28163:CDS |
| GTCAAGCAACGAATGCAAAC+TGG | 0.350543 | 4.4:-9643685 | MS.gene28163:CDS |
| TGGGCCCTCTTCCTTAATAA+TGG | 0.357096 | 4.4:+9642116 | None:intergenic |
| GGCCTTTATTCTGGATTGGC+AGG | 0.363354 | 4.4:-9645328 | MS.gene28163:CDS |
| TCCCTGCCAATCCAGAATAA+AGG | 0.367538 | 4.4:+9645326 | None:intergenic |
| AGGGCATCTGCTTTATTTGT+TGG | 0.371448 | 4.4:-9644205 | MS.gene28163:CDS |
| AATCTACAATTCCCTTGTAT+TGG | 0.374693 | 4.4:+9642148 | None:intergenic |
| TGTCATCAAGACAAGGTTAA+TGG | 0.406251 | 4.4:-9642316 | MS.gene28163:CDS |
| TCAAACCATTATTAAGGAAG+AGG | 0.421702 | 4.4:-9642121 | MS.gene28163:CDS |
| TTTCTTGTAGGCGCACTAAC+CGG | 0.426214 | 4.4:-9642360 | MS.gene28163:intron |
| CTGTTCGCTTTATTGCATCT+AGG | 0.427767 | 4.4:-9643639 | MS.gene28163:CDS |
| CGCTTTATTGCATCTAGGGA+GGG | 0.439283 | 4.4:-9643634 | MS.gene28163:CDS |
| ATGCCTATCCAAAGCACTCT+TGG | 0.455630 | 4.4:+9641901 | None:intergenic |
| TTTAAACTTCCTTAGACTGC+AGG | 0.461102 | 4.4:-9643846 | MS.gene28163:intron |
| AGATGCAGCAATGCCTCCTA+TGG | 0.462674 | 4.4:+9643821 | None:intergenic |
| CCTTAGACTGCAGGTGCCAT+AGG | 0.468200 | 4.4:-9643837 | MS.gene28163:intron |
| TCCTCTTACACTCTCCGTTA+CGG | 0.470847 | 4.4:-9647320 | MS.gene28163:CDS |
| TGTTCGCTTTATTGCATCTA+GGG | 0.478843 | 4.4:-9643638 | MS.gene28163:CDS |
| GAGAATTAAGCAACCTCTGT+TGG | 0.484810 | 4.4:+9643786 | None:intergenic |
| GAAAGGCCTTTATTCTGGAT+TGG | 0.486028 | 4.4:-9645332 | MS.gene28163:CDS |
| GTATTGGGCCAAGAGTGCTT+TGG | 0.489705 | 4.4:-9641909 | MS.gene28163:CDS |
| CAAGACAAGGTTAATGGTCC+AGG | 0.493486 | 4.4:-9642310 | MS.gene28163:intron |
| TATTTCCAATCACAGGGGTA+TGG | 0.494820 | 4.4:-9643498 | MS.gene28163:intron |
| ATTATTAAGGAAGAGGGCCC+AGG | 0.516548 | 4.4:-9642114 | MS.gene28163:CDS |
| GTTATCGCAGGAGGTACAGC+TGG | 0.521468 | 4.4:-9645875 | MS.gene28163:CDS |
| AAAGTGCGTACGAAGTCAAA+TGG | 0.523723 | 4.4:+9646502 | None:intergenic |
| CAAACCATTATTAAGGAAGA+GGG | 0.542176 | 4.4:-9642120 | MS.gene28163:CDS |
| AAGTGGTGTAGTTATAGCTC+CGG | 0.542614 | 4.4:+9642341 | None:intergenic |
| GGGCCAAGAGTGCTTTGGAT+AGG | 0.546598 | 4.4:-9641904 | MS.gene28163:CDS |
| TATGCAGAGGGTGTTATCGC+AGG | 0.559305 | 4.4:-9645887 | MS.gene28163:intron |
| TCAAGCAACGAATGCAAACT+GGG | 0.559945 | 4.4:-9643684 | MS.gene28163:CDS |
| GGGACCTGCAAACCAATACA+AGG | 0.561092 | 4.4:-9642160 | MS.gene28163:CDS |
| ACGGTGCAAGATTCTGCCTC+CGG | 0.561209 | 4.4:-9647301 | MS.gene28163:intron |
| TCGTTTAGGTTATATGCTTG+CGG | 0.564520 | 4.4:-9643415 | MS.gene28163:intron |
| GCAAAACTGAATAGCATCGA+AGG | 0.569103 | 4.4:+9643452 | None:intergenic |
| GGCAGAATCTTGCACCGTAA+CGG | 0.574358 | 4.4:+9647306 | None:intergenic |
| TCGCTTTATTGCATCTAGGG+AGG | 0.574800 | 4.4:-9643635 | MS.gene28163:CDS |
| TAGACTGCAGGTGCCATAGG+AGG | 0.585629 | 4.4:-9643834 | MS.gene28163:CDS |
| GCCTTTATTCTGGATTGGCA+GGG | 0.591598 | 4.4:-9645327 | MS.gene28163:CDS |
| TTTAGGTGTAGGACGCCTCT+CGG | 0.591628 | 4.4:+9641828 | None:intergenic |
| GTGTAGGACGCCTCTCGGCA+AGG | 0.600855 | 4.4:+9641833 | None:intergenic |
| AGAGTGCTTTGGATAGGCAT+AGG | 0.606452 | 4.4:-9641898 | MS.gene28163:CDS |
| CTGCAAAGCAGAAATTGCTA+AGG | 0.608222 | 4.4:-9644171 | MS.gene28163:CDS |
| ACCGTAACGGAGAGTGTAAG+AGG | 0.610387 | 4.4:+9647319 | None:intergenic |
| CTAAACGAATCTGCTCATAG+AGG | 0.612392 | 4.4:+9643430 | None:intergenic |
| GCGAACAGCATTAGAAGCTG+AGG | 0.620160 | 4.4:+9643654 | None:intergenic |
| CACTTGATGTCATCAAGACA+AGG | 0.621719 | 4.4:-9642323 | MS.gene28163:CDS |
| CACTGAGCTAGTTTAGGTGT+AGG | 0.633466 | 4.4:+9641817 | None:intergenic |
| CATACCTTCAGAAAAGCACC+TGG | 0.639866 | 4.4:+9642096 | None:intergenic |
| CAAAACTGAATAGCATCGAA+GGG | 0.640886 | 4.4:+9643453 | None:intergenic |
| GTGCTTTGGATAGGCATAGG+TGG | 0.648337 | 4.4:-9641895 | MS.gene28163:CDS |
| CAAAACGTTTCCTTGCCGAG+AGG | 0.661791 | 4.4:-9641843 | MS.gene28163:CDS |
| CTTGTCTTGATGACATCAAG+TGG | 0.662260 | 4.4:+9642324 | None:intergenic |
| GCAGAGGGTGTTATCGCAGG+AGG | 0.664121 | 4.4:-9645884 | MS.gene28163:intron |
| GGACCTGCAAACCAATACAA+GGG | 0.705803 | 4.4:-9642159 | MS.gene28163:CDS |
| CTCACGGTAAGACACCAGCA+AGG | 0.720656 | 4.4:+9645302 | None:intergenic |
| ATACCTTCAGAAAAGCACCT+GGG | 0.748450 | 4.4:+9642097 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTATTTTTATGTATTTTA+AGG | - | chr4.4:9645732-9645751 | MS.gene28163:intron | 10.0% |
| !!! | TTTTAAAATTGATATTTCTA+TGG | - | chr4.4:9645352-9645371 | MS.gene28163:CDS | 10.0% |
| !! | AAAATAAAATACACATATGA+AGG | + | chr4.4:9642836-9642855 | None:intergenic | 15.0% |
| !! | AAATAAAATACACATATGAA+GGG | + | chr4.4:9642835-9642854 | None:intergenic | 15.0% |
| !! | AATATGATTTATCTAATTCT+TGG | - | chr4.4:9643979-9643998 | MS.gene28163:intron | 15.0% |
| !! | ATATTCTTATATTTATTGCA+GGG | - | chr4.4:9647180-9647199 | MS.gene28163:intron | 15.0% |
| !! | CAAAAAATTACAAATAGAAA+TGG | + | chr4.4:9646593-9646612 | None:intergenic | 15.0% |
| !! | TAACAAATATATGGAAATTA+AGG | + | chr4.4:9644032-9644051 | None:intergenic | 15.0% |
| !! | TATTTCACAAATTATTTAAG+CGG | - | chr4.4:9644790-9644809 | MS.gene28163:intron | 15.0% |
| !! | TCCAAACAAAATTTAATATA+AGG | + | chr4.4:9644691-9644710 | None:intergenic | 15.0% |
| !! | TCTTTAAACATTAATTCATA+AGG | + | chr4.4:9646230-9646249 | None:intergenic | 15.0% |
| !! | TTATACTATCTAATCTATAT+GGG | + | chr4.4:9642207-9642226 | None:intergenic | 15.0% |
| !! | TTTATACTATCTAATCTATA+TGG | + | chr4.4:9642208-9642227 | None:intergenic | 15.0% |
| !!! | AAAATGCTTTAGAATTTTTA+TGG | - | chr4.4:9645220-9645239 | MS.gene28163:intron | 15.0% |
| !!! | AAATGATCATTTCTTTATTT+TGG | - | chr4.4:9646660-9646679 | MS.gene28163:intron | 15.0% |
| !!! | AAATGCTTTAGAATTTTTAT+GGG | - | chr4.4:9645221-9645240 | MS.gene28163:intron | 15.0% |
| !!! | ATATTTGTTGATATTGATAT+AGG | - | chr4.4:9644091-9644110 | MS.gene28163:intron | 15.0% |
| !!! | ATTTTGTTTAAATGTTTCTT+TGG | - | chr4.4:9645584-9645603 | MS.gene28163:intron | 15.0% |
| !!! | GAAAATAAACCTATATTTTT+TGG | - | chr4.4:9643471-9643490 | MS.gene28163:CDS | 15.0% |
| !!! | TCCTTATATTAAATTTTGTT+TGG | - | chr4.4:9644687-9644706 | MS.gene28163:intron | 15.0% |
| !!! | TTTAATTAAGATCTAGAATT+AGG | + | chr4.4:9646390-9646409 | None:intergenic | 15.0% |
| !!! | TTTCTATTTGTAATTTTTTG+TGG | - | chr4.4:9646593-9646612 | MS.gene28163:intron | 15.0% |
| !! | AAAATATCAAAAGAAAGAGA+TGG | + | chr4.4:9645534-9645553 | None:intergenic | 20.0% |
| !! | AAATATATGGAAATTAAGGT+TGG | + | chr4.4:9644028-9644047 | None:intergenic | 20.0% |
| !! | AAATATCAAAAGAAAGAGAT+GGG | + | chr4.4:9645533-9645552 | None:intergenic | 20.0% |
| !! | AATTAATGTTTAAAGATGTG+TGG | - | chr4.4:9646234-9646253 | MS.gene28163:intron | 20.0% |
| !! | ACAAAATTTAATATAAGGAG+AGG | + | chr4.4:9644686-9644705 | None:intergenic | 20.0% |
| !! | ACAAATTATAATGACTATTG+AGG | - | chr4.4:9643332-9643351 | MS.gene28163:intron | 20.0% |
| !! | ACATTTAAACAAAATATCAC+AGG | + | chr4.4:9645579-9645598 | None:intergenic | 20.0% |
| !! | ACTGTCAATAATCAATAATA+TGG | + | chr4.4:9642345-9642364 | None:intergenic | 20.0% |
| !! | ATATTATCATCATAATTTCC+AGG | + | chr4.4:9644075-9644094 | None:intergenic | 20.0% |
| !! | CAAAATTTAATATAAGGAGA+GGG | + | chr4.4:9644685-9644704 | None:intergenic | 20.0% |
| !! | CAAATTATAATGACTATTGA+GGG | - | chr4.4:9643333-9643352 | MS.gene28163:intron | 20.0% |
| !! | CATATTCTTATATTTATTGC+AGG | - | chr4.4:9647179-9647198 | MS.gene28163:intron | 20.0% |
| !! | GATATTTAAACACAATCTAA+GGG | + | chr4.4:9643131-9643150 | None:intergenic | 20.0% |
| !! | GTTACTACTTATGTTTATAT+AGG | + | chr4.4:9645013-9645032 | None:intergenic | 20.0% |
| !! | TAGCAAATATATCTTCATTT+AGG | + | chr4.4:9646551-9646570 | None:intergenic | 20.0% |
| !! | TGATATTTAAACACAATCTA+AGG | + | chr4.4:9643132-9643151 | None:intergenic | 20.0% |
| !! | TTGATTCATGAATCATATAT+AGG | - | chr4.4:9644846-9644865 | MS.gene28163:intron | 20.0% |
| !!! | AACACCAACTATTAAATTTT+TGG | - | chr4.4:9644658-9644677 | MS.gene28163:intron | 20.0% |
| !!! | ATGTTTGTTTTTGTTTTGTT+AGG | - | chr4.4:9643728-9643747 | MS.gene28163:intron | 20.0% |
| !!! | CAATAGCAATTTTTTTTTGT+TGG | - | chr4.4:9643515-9643534 | MS.gene28163:intron | 20.0% |
| !!! | CAGTTGTTTTAACAAATATA+TGG | + | chr4.4:9644041-9644060 | None:intergenic | 20.0% |
| !!! | CATATATTTGTTAAAACAAC+TGG | - | chr4.4:9644039-9644058 | MS.gene28163:intron | 20.0% |
| !!! | CATCATTTTAACAGATTATA+TGG | - | chr4.4:9642504-9642523 | MS.gene28163:intron | 20.0% |
| !!! | GTATTAATTTTAAATGTGCA+GGG | - | chr4.4:9644887-9644906 | MS.gene28163:intron | 20.0% |
| !!! | TAAAGCATGAACTATTTTAT+GGG | + | chr4.4:9644265-9644284 | None:intergenic | 20.0% |
| !!! | TATTTGTAATTTTTTGTGGA+TGG | - | chr4.4:9646597-9646616 | MS.gene28163:intron | 20.0% |
| !!! | TATTTTATTTTTCGACTGTA+AGG | - | chr4.4:9642845-9642864 | MS.gene28163:intron | 20.0% |
| !!! | TCTAAATTGCTATTAAGAAA+AGG | + | chr4.4:9643674-9643693 | None:intergenic | 20.0% |
| !!! | TGTATTAATTTTAAATGTGC+AGG | - | chr4.4:9644886-9644905 | MS.gene28163:intron | 20.0% |
| !!! | TTAAAGCATGAACTATTTTA+TGG | + | chr4.4:9644266-9644285 | None:intergenic | 20.0% |
| !!! | TTAACTTTTTGATATTTCCA+TGG | - | chr4.4:9643648-9643667 | MS.gene28163:CDS | 20.0% |
| !!! | TTCAAGTTTCAAATTCAAAT+AGG | + | chr4.4:9644208-9644227 | None:intergenic | 20.0% |
| !!! | TTTTCTTAATAGCAATTTAG+AGG | - | chr4.4:9643673-9643692 | MS.gene28163:CDS | 20.0% |
| ! | AAAATATATTTCTTGCCATG+TGG | + | chr4.4:9647140-9647159 | None:intergenic | 25.0% |
| ! | AAGAATTCATATCAACATGT+AGG | - | chr4.4:9645955-9645974 | MS.gene28163:intron | 25.0% |
| ! | AATATCAAAAGAAAGAGATG+GGG | + | chr4.4:9645532-9645551 | None:intergenic | 25.0% |
| ! | ACATATTAAATCTTGACGAT+TGG | + | chr4.4:9643577-9643596 | None:intergenic | 25.0% |
| ! | AGAATTAATCTCAATAGTGT+TGG | - | chr4.4:9642152-9642171 | MS.gene28163:CDS | 25.0% |
| ! | AGGTGAATAAATGACATTAT+AGG | - | chr4.4:9646125-9646144 | MS.gene28163:intron | 25.0% |
| ! | ATTAATTCTCTCGTGAATAT+AGG | + | chr4.4:9642141-9642160 | None:intergenic | 25.0% |
| ! | GAATTAATCTCAATAGTGTT+GGG | - | chr4.4:9642153-9642172 | MS.gene28163:CDS | 25.0% |
| ! | GCACAATATAAAAACCTAAT+AGG | - | chr4.4:9642295-9642314 | MS.gene28163:intron | 25.0% |
| ! | GGAGAAAAACTATTATTGAA+AGG | - | chr4.4:9643762-9643781 | MS.gene28163:intron | 25.0% |
| ! | TAAACAATGAAGAAATCAGT+AGG | - | chr4.4:9646406-9646425 | MS.gene28163:intron | 25.0% |
| ! | TATTGATATTTCCAATCACA+GGG | - | chr4.4:9645607-9645626 | MS.gene28163:intron | 25.0% |
| ! | TATTTGCTCTTATTCCTATT+AGG | + | chr4.4:9642312-9642331 | None:intergenic | 25.0% |
| ! | TCAAGCTATATTTCTTTACA+AGG | - | chr4.4:9646311-9646330 | MS.gene28163:intron | 25.0% |
| ! | TTATATTTATTGCAGGGTAT+TGG | - | chr4.4:9647186-9647205 | MS.gene28163:intron | 25.0% |
| ! | TTGATACTTCTTACAATCTA+TGG | - | chr4.4:9644560-9644579 | MS.gene28163:intron | 25.0% |
| ! | TTGTGTTCAAACCATTATTA+AGG | - | chr4.4:9646984-9647003 | MS.gene28163:intron | 25.0% |
| ! | TTTAAGGACTTGATTTCATT+TGG | - | chr4.4:9645748-9645767 | MS.gene28163:intron | 25.0% |
| !! | ACATGGCAAGAAATATATTT+TGG | - | chr4.4:9647139-9647158 | MS.gene28163:intron | 25.0% |
| !! | AGTTGATTTACATAGTATAG+TGG | - | chr4.4:9643608-9643627 | MS.gene28163:intron | 25.0% |
| !! | ATGTTCTGATTTTACAAAAG+AGG | - | chr4.4:9644620-9644639 | MS.gene28163:intron | 25.0% |
| !! | CGCCTTTTATGTAAAAAAAT+GGG | + | chr4.4:9643702-9643721 | None:intergenic | 25.0% |
| !! | GATTTGTATTTCTTTTTGCT+AGG | - | chr4.4:9646053-9646072 | MS.gene28163:intron | 25.0% |
| !! | TATATTTATTGCAGGGTATT+GGG | - | chr4.4:9647187-9647206 | MS.gene28163:intron | 25.0% |
| !! | TGATATTTTGTTGCTAAGAA+TGG | - | chr4.4:9645800-9645819 | MS.gene28163:intron | 25.0% |
| !! | TGTTCTGATTTTACAAAAGA+GGG | - | chr4.4:9644621-9644640 | MS.gene28163:intron | 25.0% |
| !! | TTATTGATTATTGACAGTCA+AGG | - | chr4.4:9642347-9642366 | MS.gene28163:CDS | 25.0% |
| !! | TTCTATTCTTTTAATGACTG+AGG | - | chr4.4:9642932-9642951 | MS.gene28163:intron | 25.0% |
| !!! | AAATAGGTTTTTCGGTAATT+AGG | - | chr4.4:9646625-9646644 | MS.gene28163:intron | 25.0% |
| !!! | CTCCCATTTTTTTACATAAA+AGG | - | chr4.4:9643697-9643716 | MS.gene28163:intron | 25.0% |
| !!! | GCAATTTTTTTTTGTTGGAT+AGG | - | chr4.4:9643520-9643539 | MS.gene28163:intron | 25.0% |
| !!! | TAACTTTTGTTATAAGCAGT+AGG | + | chr4.4:9641954-9641973 | None:intergenic | 25.0% |
| !!! | TAAGATTCAAGGTTTTGATT+CGG | + | chr4.4:9646286-9646305 | None:intergenic | 25.0% |
| !!! | TATACCATTTTGTTTCTTGT+AGG | - | chr4.4:9646739-9646758 | MS.gene28163:intron | 25.0% |
| !!! | TATTATGGTTACCCTTTTTT+AGG | - | chr4.4:9642959-9642978 | MS.gene28163:intron | 25.0% |
| AAAAGTTATTGGCAAGCATA+GGG | - | chr4.4:9643917-9643936 | MS.gene28163:intron | 30.0% | |
| AAAATATCACAATAGTGGCT+TGG | + | chr4.4:9645789-9645808 | None:intergenic | 30.0% | |
| AAATATCACAATAGTGGCTT+GGG | + | chr4.4:9645788-9645807 | None:intergenic | 30.0% | |
| AAATTATGTTCTACAGCCTT+GGG | - | chr4.4:9647095-9647114 | MS.gene28163:intron | 30.0% | |
| AATCTACAATTCCCTTGTAT+TGG | + | chr4.4:9646966-9646985 | None:intergenic | 30.0% | |
| AATGACTGAGGACATTATTA+TGG | - | chr4.4:9642944-9642963 | MS.gene28163:intron | 30.0% | |
| ACATGTAGGAAATACCTATT+TGG | - | chr4.4:9645969-9645988 | MS.gene28163:intron | 30.0% | |
| ATAAAGAAAGCAACCATTTG+AGG | + | chr4.4:9642985-9643004 | None:intergenic | 30.0% | |
| ATAGGTGGTTCAATATTCTT+TGG | - | chr4.4:9647231-9647250 | MS.gene28163:intron | 30.0% | |
| ATCGAAAAATAGCTTATTGC+TGG | + | chr4.4:9641986-9642005 | None:intergenic | 30.0% | |
| ATCTTTGATAAACCCCAAAT+AGG | + | chr4.4:9645986-9646005 | None:intergenic | 30.0% | |
| ATGGTTGAAAACTGTTTCAT+TGG | - | chr4.4:9645371-9645390 | MS.gene28163:intron | 30.0% | |
| ATGTAAAACTCCATCATATC+GGG | + | chr4.4:9644166-9644185 | None:intergenic | 30.0% | |
| ATGTAGGAAATACCTATTTG+GGG | - | chr4.4:9645971-9645990 | MS.gene28163:intron | 30.0% | |
| ATTATTGACAGTCAAGGAAA+AGG | - | chr4.4:9642353-9642372 | MS.gene28163:CDS | 30.0% | |
| ATTGATATTTCCAATCACAG+GGG | - | chr4.4:9645608-9645627 | MS.gene28163:intron | 30.0% | |
| CAAACCATTATTAAGGAAGA+GGG | - | chr4.4:9646991-9647010 | MS.gene28163:intron | 30.0% | |
| CATAGTATACAACTTTCAGT+AGG | - | chr4.4:9643950-9643969 | MS.gene28163:intron | 30.0% | |
| CATGATGTTTCAAACATTCT+AGG | - | chr4.4:9643846-9643865 | MS.gene28163:intron | 30.0% | |
| CATGTAGGAAATACCTATTT+GGG | - | chr4.4:9645970-9645989 | MS.gene28163:intron | 30.0% | |
| CTCGTCTTTCCAAAAAATAT+AGG | + | chr4.4:9643483-9643502 | None:intergenic | 30.0% | |
| CTGACAATGTGTTTATAAGT+GGG | + | chr4.4:9644373-9644392 | None:intergenic | 30.0% | |
| GATCCAGAAAATGCAATTAT+TGG | - | chr4.4:9646093-9646112 | MS.gene28163:intron | 30.0% | |
| GATGTAAAACTCCATCATAT+CGG | + | chr4.4:9644167-9644186 | None:intergenic | 30.0% | |
| GCAACAAAATATCACAATAG+TGG | + | chr4.4:9645794-9645813 | None:intergenic | 30.0% | |
| GCTTGACAAAATAAGATTCA+AGG | + | chr4.4:9646297-9646316 | None:intergenic | 30.0% | |
| GGATCACTTAGCTATATATA+TGG | - | chr4.4:9644581-9644600 | MS.gene28163:intron | 30.0% | |
| GGGTCCAAAAATTTAATAGT+TGG | + | chr4.4:9644665-9644684 | None:intergenic | 30.0% | |
| GTAATAAGTAATAGCCAATG+TGG | - | chr4.4:9643397-9643416 | MS.gene28163:intron | 30.0% | |
| GTCCTTAAGTTTGTACTTTA+AGG | - | chr4.4:9644478-9644497 | MS.gene28163:intron | 30.0% | |
| TAAACAAAATATCACAGGTG+CGG | + | chr4.4:9645574-9645593 | None:intergenic | 30.0% | |
| TAAGTTGTTTATCGAAACAG+AGG | + | chr4.4:9641912-9641931 | None:intergenic | 30.0% | |
| TAGCTATATATATGGTTGTC+TGG | - | chr4.4:9644589-9644608 | MS.gene28163:intron | 30.0% | |
| TATATGGAAATTAAGGTTGG+TGG | + | chr4.4:9644025-9644044 | None:intergenic | 30.0% | |
| TATCTAATCTATATGGGACT+TGG | + | chr4.4:9642201-9642220 | None:intergenic | 30.0% | |
| TATGTGTATCAGGTAAAAAC+AGG | + | chr4.4:9646838-9646857 | None:intergenic | 30.0% | |
| TCAAACCATTATTAAGGAAG+AGG | - | chr4.4:9646990-9647009 | MS.gene28163:intron | 30.0% | |
| TCATATATGCAGTGAAGAAT+TGG | - | chr4.4:9643097-9643116 | MS.gene28163:intron | 30.0% | |
| TCGAAAAATAGCTTATTGCT+GGG | + | chr4.4:9641985-9642004 | None:intergenic | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | + | chr4.4:9644372-9644391 | None:intergenic | 30.0% | |
| TGGTTGAAAACTGTTTCATT+GGG | - | chr4.4:9645372-9645391 | MS.gene28163:intron | 30.0% | |
| TTATTGAAAGGCCTTTATTC+TGG | - | chr4.4:9643774-9643793 | MS.gene28163:intron | 30.0% | |
| TTCACTGCATATATGAATGA+GGG | + | chr4.4:9643093-9643112 | None:intergenic | 30.0% | |
| TTGTTAAAACAACTGGAGTT+GGG | - | chr4.4:9644046-9644065 | MS.gene28163:intron | 30.0% | |
| TTTGTTAAAACAACTGGAGT+TGG | - | chr4.4:9644045-9644064 | MS.gene28163:intron | 30.0% | |
| ! | ATATGGAAATTAAGGTTGGT+GGG | + | chr4.4:9644024-9644043 | None:intergenic | 30.0% |
| ! | GAACTATTTTATGGGTAAGA+TGG | + | chr4.4:9644257-9644276 | None:intergenic | 30.0% |
| ! | GCGCCTTTTATGTAAAAAAA+TGG | + | chr4.4:9643703-9643722 | None:intergenic | 30.0% |
| ! | GTATTGATATTTCCAATCAC+AGG | - | chr4.4:9645606-9645625 | MS.gene28163:intron | 30.0% |
| ! | GTTCTGATTTTACAAAAGAG+GGG | - | chr4.4:9644622-9644641 | MS.gene28163:intron | 30.0% |
| ! | TCAAATGGTTGCTTTCTTTA+TGG | - | chr4.4:9642984-9643003 | MS.gene28163:intron | 30.0% |
| ! | TCGCTTTGATAGCAAAAAAA+TGG | + | chr4.4:9642710-9642729 | None:intergenic | 30.0% |
| ! | TGAGTTGAAGTGTTAAGTAT+GGG | + | chr4.4:9645068-9645087 | None:intergenic | 30.0% |
| ! | TGGTAGGTAAATAGGTTTTT+CGG | - | chr4.4:9646617-9646636 | MS.gene28163:intron | 30.0% |
| ! | TGTTATCATTCTTTTGTTGC+TGG | - | chr4.4:9645179-9645198 | MS.gene28163:intron | 30.0% |
| !! | ACGTGTTTTTATAGTGTCAA+TGG | + | chr4.4:9643288-9643307 | None:intergenic | 30.0% |
| !! | ATAACTTTTGTTTGCCAGAA+AGG | + | chr4.4:9645841-9645860 | None:intergenic | 30.0% |
| !! | CAAAAAGTTAACACTGATTC+AGG | + | chr4.4:9643639-9643658 | None:intergenic | 30.0% |
| !! | CGTGTTTTTATAGTGTCAAT+GGG | + | chr4.4:9643287-9643306 | None:intergenic | 30.0% |
| !! | GTGTTTTTATAGTGTCAATG+GGG | + | chr4.4:9643286-9643305 | None:intergenic | 30.0% |
| !! | TGTTGCTTTGTTAAGCATTA+TGG | - | chr4.4:9646690-9646709 | MS.gene28163:intron | 30.0% |
| !! | TTGAGTTGAAGTGTTAAGTA+TGG | + | chr4.4:9645069-9645088 | None:intergenic | 30.0% |
| !! | TTTTTGCTATCAAAGCGAAA+AGG | - | chr4.4:9642712-9642731 | MS.gene28163:intron | 30.0% |
| !!! | AACATCATATGCCTCTTTTT+TGG | - | chr4.4:9644227-9644246 | MS.gene28163:intron | 30.0% |
| !!! | ACATCATATGCCTCTTTTTT+GGG | - | chr4.4:9644228-9644247 | MS.gene28163:intron | 30.0% |
| !!! | CTATATTTTTTGGAAAGACG+AGG | - | chr4.4:9643481-9643500 | MS.gene28163:CDS | 30.0% |
| !!! | TGTAATTTTTTGTGGATGGT+AGG | - | chr4.4:9646601-9646620 | MS.gene28163:intron | 30.0% |
| AAACAAAATATCACAGGTGC+GGG | + | chr4.4:9645573-9645592 | None:intergenic | 35.0% | |
| AAACAGGACTAAATCTTACC+TGG | + | chr4.4:9646822-9646841 | None:intergenic | 35.0% | |
| AAATGGTATACCACATCACA+AGG | + | chr4.4:9646729-9646748 | None:intergenic | 35.0% | |
| AACACAGACAGGATAATTTC+AGG | + | chr4.4:9644449-9644468 | None:intergenic | 35.0% | |
| AATTTAGTAGCATGGATTCG+AGG | - | chr4.4:9645916-9645935 | MS.gene28163:intron | 35.0% | |
| ACAGATTAAGAACTCCTTGT+TGG | - | chr4.4:9644120-9644139 | MS.gene28163:intron | 35.0% | |
| ACAGTTAAAGCATAAGCTCA+TGG | + | chr4.4:9646191-9646210 | None:intergenic | 35.0% | |
| ACTATTAAAGAGTCCCACAT+TGG | + | chr4.4:9644408-9644427 | None:intergenic | 35.0% | |
| ATAGGAACTTCGTAAATGAG+TGG | + | chr4.4:9646916-9646935 | None:intergenic | 35.0% | |
| ATATATGAATGAGGGATTGG+GGG | + | chr4.4:9643085-9643104 | None:intergenic | 35.0% | |
| CAAAAGTTATTGGCAAGCAT+AGG | - | chr4.4:9643916-9643935 | MS.gene28163:intron | 35.0% | |
| CAAATTATGTTCTACAGCCT+TGG | - | chr4.4:9647094-9647113 | MS.gene28163:intron | 35.0% | |
| CATATATGAATGAGGGATTG+GGG | + | chr4.4:9643086-9643105 | None:intergenic | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | - | chr4.4:9644371-9644390 | MS.gene28163:intron | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | + | chr4.4:9644374-9644393 | None:intergenic | 35.0% | |
| CGAAAGAAGCCAAAAGTTAT+TGG | - | chr4.4:9643906-9643925 | MS.gene28163:intron | 35.0% | |
| CGCCTTAAAGTACAAACTTA+AGG | + | chr4.4:9644483-9644502 | None:intergenic | 35.0% | |
| CTTATGACATGTGCATAAGT+TGG | + | chr4.4:9642032-9642051 | None:intergenic | 35.0% | |
| CTTCACTGCATATATGAATG+AGG | + | chr4.4:9643094-9643113 | None:intergenic | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | + | chr4.4:9644371-9644390 | None:intergenic | 35.0% | |
| GCAAGCATAATTTAGTAGCA+TGG | - | chr4.4:9645908-9645927 | MS.gene28163:intron | 35.0% | |
| GCATATATGAATGAGGGATT+GGG | + | chr4.4:9643087-9643106 | None:intergenic | 35.0% | |
| GTATCAATAAGTCTCCAACA+AGG | + | chr4.4:9644137-9644156 | None:intergenic | 35.0% | |
| TAGGCAAATTCTATGCAAGT+AGG | + | chr4.4:9644189-9644208 | None:intergenic | 35.0% | |
| TATCTTTCTGAATTTGCCCA+AGG | + | chr4.4:9647114-9647133 | None:intergenic | 35.0% | |
| TCCAATACAAGCCAAATAGA+TGG | + | chr4.4:9645143-9645162 | None:intergenic | 35.0% | |
| TCTGGCTAATTATGGTTATG+TGG | - | chr4.4:9645115-9645134 | MS.gene28163:intron | 35.0% | |
| TGAAGTGATGTGAAACATAC+CGG | + | chr4.4:9641832-9641851 | None:intergenic | 35.0% | |
| TGCATATATGAATGAGGGAT+TGG | + | chr4.4:9643088-9643107 | None:intergenic | 35.0% | |
| TGTCATCAAGACAAGGTTAA+TGG | - | chr4.4:9646795-9646814 | MS.gene28163:intron | 35.0% | |
| TTTAAACTTCCTTAGACTGC+AGG | - | chr4.4:9645265-9645284 | MS.gene28163:intron | 35.0% | |
| TTTAGCCCTATTTGAGTAGA+AGG | - | chr4.4:9643037-9643056 | MS.gene28163:CDS | 35.0% | |
| TTTGTGGATGGTAGGTAAAT+AGG | - | chr4.4:9646609-9646628 | MS.gene28163:intron | 35.0% | |
| ! | AACCATTTGAGGCCTAAAAA+AGG | + | chr4.4:9642974-9642993 | None:intergenic | 35.0% |
| ! | AAGTATGGGACTTGTTCTAA+AGG | + | chr4.4:9645054-9645073 | None:intergenic | 35.0% |
| ! | ACCATTTGAGGCCTAAAAAA+GGG | + | chr4.4:9642973-9642992 | None:intergenic | 35.0% |
| ! | AGTATGGGACTTGTTCTAAA+GGG | + | chr4.4:9645053-9645072 | None:intergenic | 35.0% |
| ! | CAAAACTGAATAGCATCGAA+GGG | + | chr4.4:9645661-9645680 | None:intergenic | 35.0% |
| ! | CTATGCTTGCCAATAACTTT+TGG | + | chr4.4:9643918-9643937 | None:intergenic | 35.0% |
| ! | GCACCAATAATTGCATTTTC+TGG | + | chr4.4:9646099-9646118 | None:intergenic | 35.0% |
| ! | TCGTTTAGGTTATATGCTTG+CGG | - | chr4.4:9645696-9645715 | MS.gene28163:intron | 35.0% |
| ! | TCTTTTGCATCTGTTAGTGT+GGG | - | chr4.4:9642576-9642595 | MS.gene28163:intron | 35.0% |
| ! | TGTTCGCTTTATTGCATCTA+GGG | - | chr4.4:9645473-9645492 | MS.gene28163:intron | 35.0% |
| ! | TTCTTTTGCATCTGTTAGTG+TGG | - | chr4.4:9642575-9642594 | MS.gene28163:intron | 35.0% |
| ! | TTGCTATTAAGAAAAGGCCA+TGG | + | chr4.4:9643668-9643687 | None:intergenic | 35.0% |
| !! | GGGTTTTGTAAAGATGACTT+AGG | - | chr4.4:9642273-9642292 | MS.gene28163:intron | 35.0% |
| !! | TGTACTTTAAGGCGTAGTAA+TGG | - | chr4.4:9644489-9644508 | MS.gene28163:intron | 35.0% |
| !! | TTGATTCGGCAGAGTAAATA+CGG | + | chr4.4:9646272-9646291 | None:intergenic | 35.0% |
| !! | TTGCTTTAAAGTCGTAAGTC+TGG | - | chr4.4:9645097-9645116 | MS.gene28163:intron | 35.0% |
| !! | TTTTGGAAAGACGAGGAAAA+AGG | - | chr4.4:9643488-9643507 | MS.gene28163:intron | 35.0% |
| !!! | CATCATATGCCTCTTTTTTG+GGG | - | chr4.4:9644229-9644248 | MS.gene28163:intron | 35.0% |
| !!! | GGTATGGATCTTTTTTACTG+CGG | - | chr4.4:9645629-9645648 | MS.gene28163:intron | 35.0% |
| !!! | GTATGGATCTTTTTTACTGC+GGG | - | chr4.4:9645630-9645649 | MS.gene28163:intron | 35.0% |
| AAAGTGCGTACGAAGTCAAA+TGG | + | chr4.4:9642612-9642631 | None:intergenic | 40.0% | |
| AACAAAATATCACAGGTGCG+GGG | + | chr4.4:9645572-9645591 | None:intergenic | 40.0% | |
| AAGATGGAACCCCAAAAAAG+AGG | + | chr4.4:9644241-9644260 | None:intergenic | 40.0% | |
| AAGTGGTGTAGTTATAGCTC+CGG | + | chr4.4:9646773-9646792 | None:intergenic | 40.0% | |
| AATCTTGCTAACGAGCTTGA+TGG | - | chr4.4:9643198-9643217 | MS.gene28163:intron | 40.0% | |
| ACCAAGCACAAATGAAGTAG+TGG | + | chr4.4:9646028-9646047 | None:intergenic | 40.0% | |
| AGCTTGATGGAATTATGCAG+AGG | - | chr4.4:9643211-9643230 | MS.gene28163:intron | 40.0% | |
| ATGAGTCGTCAATCCAAACA+CGG | - | chr4.4:9642115-9642134 | MS.gene28163:CDS | 40.0% | |
| ATTATCCTGTCTGTGTTTCG+TGG | - | chr4.4:9644452-9644471 | MS.gene28163:intron | 40.0% | |
| CACTATAAAAACACGTCTGC+AGG | - | chr4.4:9643292-9643311 | MS.gene28163:intron | 40.0% | |
| CACTTGATGTCATCAAGACA+AGG | - | chr4.4:9646788-9646807 | MS.gene28163:intron | 40.0% | |
| CTAAACGAATCTGCTCATAG+AGG | + | chr4.4:9645684-9645703 | None:intergenic | 40.0% | |
| CTCTATGAGCAGATTCGTTT+AGG | - | chr4.4:9645682-9645701 | MS.gene28163:intron | 40.0% | |
| CTGCAAAGCAGAAATTGCTA+AGG | - | chr4.4:9644940-9644959 | MS.gene28163:intron | 40.0% | |
| CTTAGCAATTTCTGCTTTGC+AGG | + | chr4.4:9644942-9644961 | None:intergenic | 40.0% | |
| GAAAGGCCTTTATTCTGGAT+TGG | - | chr4.4:9643779-9643798 | MS.gene28163:intron | 40.0% | |
| GACTTCGTACGCACTTTATT+CGG | - | chr4.4:9642615-9642634 | MS.gene28163:intron | 40.0% | |
| GAGAATTAAGCAACCTCTGT+TGG | + | chr4.4:9645328-9645347 | None:intergenic | 40.0% | |
| GCTTGATGGAATTATGCAGA+GGG | - | chr4.4:9643212-9643231 | MS.gene28163:intron | 40.0% | |
| GTCAGCCTTCTACTCAAATA+GGG | + | chr4.4:9643045-9643064 | None:intergenic | 40.0% | |
| GTCGTAAGTCTGGCTAATTA+TGG | - | chr4.4:9645107-9645126 | MS.gene28163:intron | 40.0% | |
| GTTATGTGGAGCCATCTATT+TGG | - | chr4.4:9645129-9645148 | MS.gene28163:intron | 40.0% | |
| TAGAGGCTTGATATCCACAT+TGG | + | chr4.4:9643414-9643433 | None:intergenic | 40.0% | |
| TATTTCCAATCACAGGGGTA+TGG | - | chr4.4:9645613-9645632 | MS.gene28163:intron | 40.0% | |
| TCAAGCAACGAATGCAAACT+GGG | - | chr4.4:9645427-9645446 | MS.gene28163:intron | 40.0% | |
| TCCACTACTTCATTTGTGCT+TGG | - | chr4.4:9646024-9646043 | MS.gene28163:intron | 40.0% | |
| TGCGCCTACAAGAAACAAAA+TGG | + | chr4.4:9646746-9646765 | None:intergenic | 40.0% | |
| TTCAGAAAGATACAGCCACA+TGG | - | chr4.4:9647122-9647141 | MS.gene28163:intron | 40.0% | |
| TTTAACTGTGCTTCAAGCTG+AGG | - | chr4.4:9646202-9646221 | MS.gene28163:intron | 40.0% | |
| TTTGTGACTCTTGAGAATCG+TGG | - | chr4.4:9644291-9644310 | MS.gene28163:intron | 40.0% | |
| ! | CATTTTCTTTAATGCTCCGC+AGG | - | chr4.4:9645401-9645420 | MS.gene28163:intron | 40.0% |
| ! | CTGTTCGCTTTATTGCATCT+AGG | - | chr4.4:9645472-9645491 | MS.gene28163:intron | 40.0% |
| ! | CTTGTCTTGATGACATCAAG+TGG | + | chr4.4:9646790-9646809 | None:intergenic | 40.0% |
| ! | CTTTTGCATCTGTTAGTGTG+GGG | - | chr4.4:9642577-9642596 | MS.gene28163:intron | 40.0% |
| ! | GCAAAACTGAATAGCATCGA+AGG | + | chr4.4:9645662-9645681 | None:intergenic | 40.0% |
| ! | GGAAACGTTTTGTACTCTCA+AGG | + | chr4.4:9647260-9647279 | None:intergenic | 40.0% |
| ! | TCTGAGTGCTTTTGCTCATT+TGG | - | chr4.4:9644977-9644996 | MS.gene28163:intron | 40.0% |
| !! | AACTCACAAGCCAGTTTTGT+GGG | + | chr4.4:9644340-9644359 | None:intergenic | 40.0% |
| !! | AGGGCATCTGCTTTATTTGT+TGG | - | chr4.4:9644906-9644925 | MS.gene28163:intron | 40.0% |
| !! | ATACCTTCAGAAAAGCACCT+GGG | + | chr4.4:9647017-9647036 | None:intergenic | 40.0% |
| !! | ATTCCCTTGTATTGGTTTGC+AGG | + | chr4.4:9646958-9646977 | None:intergenic | 40.0% |
| !! | CCTATTTTTCTCCTCCTCAA+GGG | - | chr4.4:9646931-9646950 | MS.gene28163:intron | 40.0% |
| !! | GCAATTATTGGTGCTTTTGC+AGG | - | chr4.4:9646105-9646124 | MS.gene28163:intron | 40.0% |
| !! | GCCATCTATTTGGCTTGTAT+TGG | - | chr4.4:9645139-9645158 | MS.gene28163:intron | 40.0% |
| !! | TCCTATTTTTCTCCTCCTCA+AGG | - | chr4.4:9646930-9646949 | MS.gene28163:intron | 40.0% |
| !!! | ACCCTTTTTTAGGCCTCAAA+TGG | - | chr4.4:9642969-9642988 | MS.gene28163:intron | 40.0% |
| !!! | GCAAAAGCACTCAGATTTTC+AGG | + | chr4.4:9644972-9644991 | None:intergenic | 40.0% |
| AAAACCCGCTGGTAAGATGA+GGG | + | chr4.4:9642260-9642279 | None:intergenic | 45.0% | |
| AAACTCCATCATATCGGGAC+AGG | + | chr4.4:9644161-9644180 | None:intergenic | 45.0% | |
| AAGATCCATACCCCTGTGAT+TGG | + | chr4.4:9645621-9645640 | None:intergenic | 45.0% | |
| ACATATGAAGGGATCGCAAC+TGG | + | chr4.4:9642824-9642843 | None:intergenic | 45.0% | |
| AGGCCATCTCTTATCCAATG+TGG | - | chr4.4:9644391-9644410 | MS.gene28163:intron | 45.0% | |
| AGTGATGTGAAACATACCGG+AGG | + | chr4.4:9641829-9641848 | None:intergenic | 45.0% | |
| ATACTCCTGTCCCGATATGA+TGG | - | chr4.4:9644153-9644172 | MS.gene28163:CDS | 45.0% | |
| ATTATTAAGGAAGAGGGCCC+AGG | - | chr4.4:9646997-9647016 | MS.gene28163:intron | 45.0% | |
| ATTCGTTGCTTGACAACCTG+CGG | + | chr4.4:9645420-9645439 | None:intergenic | 45.0% | |
| CAAGACAAGGTTAATGGTCC+AGG | - | chr4.4:9646801-9646820 | MS.gene28163:intron | 45.0% | |
| CACCACCATATTTCAGACAC+GGG | - | chr4.4:9646516-9646535 | MS.gene28163:CDS | 45.0% | |
| CACGAGAGGATATGTGTATC+AGG | + | chr4.4:9646848-9646867 | None:intergenic | 45.0% | |
| CCCTTGAGGAGGAGAAAAAT+AGG | + | chr4.4:9646934-9646953 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+TGG | - | chr4.4:9644327-9644346 | MS.gene28163:intron | 45.0% | |
| GAAACATCATGCTATCCACG+AGG | + | chr4.4:9643837-9643856 | None:intergenic | 45.0% | |
| GCACCACCATATTTCAGACA+CGG | - | chr4.4:9646515-9646534 | MS.gene28163:CDS | 45.0% | |
| GCAGAGTAATTAGACACGAG+AGG | + | chr4.4:9646862-9646881 | None:intergenic | 45.0% | |
| GGACCTGCAAACCAATACAA+GGG | - | chr4.4:9646952-9646971 | MS.gene28163:intron | 45.0% | |
| GGCCATCTCTTATCCAATGT+GGG | - | chr4.4:9644392-9644411 | MS.gene28163:intron | 45.0% | |
| GGGGGATAACATCTTAGTGT+TGG | + | chr4.4:9643067-9643086 | None:intergenic | 45.0% | |
| GGTCAGCCTTCTACTCAAAT+AGG | + | chr4.4:9643046-9643065 | None:intergenic | 45.0% | |
| GTCAAGCAACGAATGCAAAC+TGG | - | chr4.4:9645426-9645445 | MS.gene28163:intron | 45.0% | |
| GTCATCTTTACAAAACCCGC+TGG | + | chr4.4:9642271-9642290 | None:intergenic | 45.0% | |
| GTCCCACATTGGATAAGAGA+TGG | + | chr4.4:9644397-9644416 | None:intergenic | 45.0% | |
| GTGGGGTTGTGTTAGGATTT+GGG | + | chr4.4:9644322-9644341 | None:intergenic | 45.0% | |
| TCCCTGCCAATCCAGAATAA+AGG | + | chr4.4:9643788-9643807 | None:intergenic | 45.0% | |
| TCCTCTTACACTCTCCGTTA+CGG | - | chr4.4:9641791-9641810 | MS.gene28163:CDS | 45.0% | |
| TCGTGAATATAGGCCGTGTT+TGG | + | chr4.4:9642131-9642150 | None:intergenic | 45.0% | |
| TGGGCCCTCTTCCTTAATAA+TGG | + | chr4.4:9646998-9647017 | None:intergenic | 45.0% | |
| TGTGGGGTTGTGTTAGGATT+TGG | + | chr4.4:9644323-9644342 | None:intergenic | 45.0% | |
| TTTCTTGTAGGCGCACTAAC+CGG | - | chr4.4:9646751-9646770 | MS.gene28163:intron | 45.0% | |
| TTTGCCAGAAAGGTCTGAGA+GGG | + | chr4.4:9645831-9645850 | None:intergenic | 45.0% | |
| ! | AAGCTCCCGTGTCTGAAATA+TGG | + | chr4.4:9646524-9646543 | None:intergenic | 45.0% |
| ! | AGAGTGCTTTGGATAGGCAT+AGG | - | chr4.4:9647213-9647232 | MS.gene28163:intron | 45.0% |
| ! | ATGCCTATCCAAAGCACTCT+TGG | + | chr4.4:9647213-9647232 | None:intergenic | 45.0% |
| ! | CAACTCACAAGCCAGTTTTG+TGG | + | chr4.4:9644341-9644360 | None:intergenic | 45.0% |
| ! | CACTGAGCTAGTTTAGGTGT+AGG | + | chr4.4:9647297-9647316 | None:intergenic | 45.0% |
| ! | CGCTTTATTGCATCTAGGGA+GGG | - | chr4.4:9645477-9645496 | MS.gene28163:intron | 45.0% |
| ! | TCGCTTTATTGCATCTAGGG+AGG | - | chr4.4:9645476-9645495 | MS.gene28163:intron | 45.0% |
| ! | TTTTGTTCGCGTTCCAACAG+AGG | - | chr4.4:9645312-9645331 | MS.gene28163:CDS | 45.0% |
| !! | ACTCACAAGCCAGTTTTGTG+GGG | + | chr4.4:9644339-9644358 | None:intergenic | 45.0% |
| !! | CAAAACTGGCTTGTGAGTTG+AGG | - | chr4.4:9644341-9644360 | MS.gene28163:intron | 45.0% |
| !! | CAGTTTTGTGGGGTTGTGTT+AGG | + | chr4.4:9644329-9644348 | None:intergenic | 45.0% |
| !! | CATACCTTCAGAAAAGCACC+TGG | + | chr4.4:9647018-9647037 | None:intergenic | 45.0% |
| !! | GCCTTTATTCTGGATTGGCA+GGG | - | chr4.4:9643784-9643803 | MS.gene28163:intron | 45.0% |
| !! | TTGTTTTGTTAGGCTGCTCG+CGG | - | chr4.4:9643738-9643757 | MS.gene28163:intron | 45.0% |
| !!! | AAAAATAATTTAGTTTTATT+TGG | - | chr4.4:9646441-9646460 | MS.gene28163:intron | 5.0% |
| AAACCCGCTGGTAAGATGAG+GGG | + | chr4.4:9642259-9642278 | None:intergenic | 50.0% | |
| ACAACTGGAGTTGGGTTACC+TGG | - | chr4.4:9644054-9644073 | MS.gene28163:intron | 50.0% | |
| ACACTCCACGAAACACAGAC+AGG | + | chr4.4:9644460-9644479 | None:intergenic | 50.0% | |
| ACTTTGCATCACTGCCAGCT+AGG | - | chr4.4:9643435-9643454 | MS.gene28163:CDS | 50.0% | |
| AGATGCAGCAATGCCTCCTA+TGG | + | chr4.4:9645293-9645312 | None:intergenic | 50.0% | |
| ATACCCCTCATCTTACCAGC+GGG | - | chr4.4:9642253-9642272 | MS.gene28163:intron | 50.0% | |
| ATATCACAGGTGCGGGGAAT+AGG | + | chr4.4:9645566-9645585 | None:intergenic | 50.0% | |
| CAAAACCCGCTGGTAAGATG+AGG | + | chr4.4:9642261-9642280 | None:intergenic | 50.0% | |
| CAAAACGTTTCCTTGCCGAG+AGG | - | chr4.4:9647268-9647287 | MS.gene28163:intron | 50.0% | |
| CCACAACAATCAAGCCTAGC+TGG | + | chr4.4:9643452-9643471 | None:intergenic | 50.0% | |
| CCAGCTAGGCTTGATTGTTG+TGG | - | chr4.4:9643449-9643468 | MS.gene28163:CDS | 50.0% | |
| GATACCCCTCATCTTACCAG+CGG | - | chr4.4:9642252-9642271 | MS.gene28163:intron | 50.0% | |
| GCAACTGGTGTGTGTGAGAA+CGG | + | chr4.4:9642809-9642828 | None:intergenic | 50.0% | |
| GCGAACAGCATTAGAAGCTG+AGG | + | chr4.4:9645460-9645479 | None:intergenic | 50.0% | |
| GGCAGAATCTTGCACCGTAA+CGG | + | chr4.4:9641808-9641827 | None:intergenic | 50.0% | |
| GGCAGTGATGCAAAGTCTAG+AGG | + | chr4.4:9643431-9643450 | None:intergenic | 50.0% | |
| GGGACCTGCAAACCAATACA+AGG | - | chr4.4:9646951-9646970 | MS.gene28163:intron | 50.0% | |
| GTTTGCCAGAAAGGTCTGAG+AGG | + | chr4.4:9645832-9645851 | None:intergenic | 50.0% | |
| TACCACATCACAAGGCTGCT+AGG | + | chr4.4:9646721-9646740 | None:intergenic | 50.0% | |
| TGCTATCCACGAGGATCTCA+CGG | + | chr4.4:9643828-9643847 | None:intergenic | 50.0% | |
| TTGCCAGAAAGGTCTGAGAG+GGG | + | chr4.4:9645830-9645849 | None:intergenic | 50.0% | |
| TTTAGGTGTAGGACGCCTCT+CGG | + | chr4.4:9647286-9647305 | None:intergenic | 50.0% | |
| ! | ACCGTAACGGAGAGTGTAAG+AGG | + | chr4.4:9641795-9641814 | None:intergenic | 50.0% |
| ! | CTCCCGTGTCTGAAATATGG+TGG | + | chr4.4:9646521-9646540 | None:intergenic | 50.0% |
| ! | CTGCAGCACTGAGCTAGTTT+AGG | + | chr4.4:9647303-9647322 | None:intergenic | 50.0% |
| ! | GCATCTAGGGAGGGCTTTAA+AGG | - | chr4.4:9645486-9645505 | MS.gene28163:intron | 50.0% |
| ! | GTGCTTTGGATAGGCATAGG+TGG | - | chr4.4:9647216-9647235 | MS.gene28163:intron | 50.0% |
| ! | TCAATAGTGTTGGGCGTGAG+AGG | - | chr4.4:9642162-9642181 | MS.gene28163:CDS | 50.0% |
| !! | ATTGGTTTGCAGGTCCCTTG+AGG | + | chr4.4:9646948-9646967 | None:intergenic | 50.0% |
| !! | GGCCTTTATTCTGGATTGGC+AGG | - | chr4.4:9643783-9643802 | MS.gene28163:intron | 50.0% |
| !! | GTATTGGGCCAAGAGTGCTT+TGG | - | chr4.4:9647202-9647221 | MS.gene28163:intron | 50.0% |
| !! | TATGCAGAGGGTGTTATCGC+AGG | - | chr4.4:9643224-9643243 | MS.gene28163:intron | 50.0% |
| ACGGTGCAAGATTCTGCCTC+CGG | - | chr4.4:9641810-9641829 | MS.gene28163:CDS | 55.0% | |
| CCTATGGCACCTGCAGTCTA+AGG | + | chr4.4:9645277-9645296 | None:intergenic | 55.0% | |
| CTCACGGTAAGACACCAGCA+AGG | + | chr4.4:9643812-9643831 | None:intergenic | 55.0% | |
| GTCTTACCGTGAGATCCTCG+TGG | - | chr4.4:9643819-9643838 | MS.gene28163:CDS | 55.0% | |
| GTGTGTGTGAGAACGGAGTG+AGG | + | chr4.4:9642802-9642821 | None:intergenic | 55.0% | |
| TGCCAGAAAGGTCTGAGAGG+GGG | + | chr4.4:9645829-9645848 | None:intergenic | 55.0% | |
| ! | CCTTAGACTGCAGGTGCCAT+AGG | - | chr4.4:9645274-9645293 | MS.gene28163:intron | 55.0% |
| ! | GTCCTAGCAGCCTTGTGATG+TGG | - | chr4.4:9646716-9646735 | MS.gene28163:intron | 55.0% |
| ! | GTTATCGCAGGAGGTACAGC+TGG | - | chr4.4:9643236-9643255 | MS.gene28163:intron | 55.0% |
| ! | GTTGGGCGTGAGAGGTGTAT+TGG | - | chr4.4:9642170-9642189 | MS.gene28163:intron | 55.0% |
| ! | TAGACTGCAGGTGCCATAGG+AGG | - | chr4.4:9645277-9645296 | MS.gene28163:intron | 55.0% |
| ! | TTTTGTTAGGCTGCTCGCGG+AGG | - | chr4.4:9643741-9643760 | MS.gene28163:intron | 55.0% |
| !! | GGGCCAAGAGTGCTTTGGAT+AGG | - | chr4.4:9647207-9647226 | MS.gene28163:intron | 55.0% |
| GCCAGAAAGGTCTGAGAGGG+GGG | + | chr4.4:9645828-9645847 | None:intergenic | 60.0% | |
| GGTTTGCAGGTCCCTTGAGG+AGG | + | chr4.4:9646945-9646964 | None:intergenic | 60.0% | |
| TCCCCCCTCTCAGACCTTTC+TGG | - | chr4.4:9645824-9645843 | MS.gene28163:CDS | 60.0% | |
| ! | GGATTGGCAGGGAACCTTGC+TGG | - | chr4.4:9643795-9643814 | MS.gene28163:intron | 60.0% |
| ! | GGGCCCAGGTGCTTTTCTGA+AGG | - | chr4.4:9647011-9647030 | MS.gene28163:intron | 60.0% |
| !! | GCAGAGGGTGTTATCGCAGG+AGG | - | chr4.4:9643227-9643246 | MS.gene28163:intron | 60.0% |
| GTGTAGGACGCCTCTCGGCA+AGG | + | chr4.4:9647281-9647300 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9641786 | 9647347 | 9641786 | ID=MS.gene28163 |
| chr4.4 | mRNA | 9641786 | 9647347 | 9641786 | ID=MS.gene28163.t1;Parent=MS.gene28163 |
| chr4.4 | exon | 9647302 | 9647347 | 9647302 | ID=MS.gene28163.t1.exon1;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9647302 | 9647347 | 9647302 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9646497 | 9646598 | 9646497 | ID=MS.gene28163.t1.exon2;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9646497 | 9646598 | 9646497 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9645820 | 9645902 | 9645820 | ID=MS.gene28163.t1.exon3;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9645820 | 9645902 | 9645820 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9645307 | 9645383 | 9645307 | ID=MS.gene28163.t1.exon4;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9645307 | 9645383 | 9645307 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9644135 | 9644225 | 9644135 | ID=MS.gene28163.t1.exon5;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9644135 | 9644225 | 9644135 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9643800 | 9643853 | 9643800 | ID=MS.gene28163.t1.exon6;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9643800 | 9643853 | 9643800 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9643615 | 9643710 | 9643615 | ID=MS.gene28163.t1.exon7;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9643615 | 9643710 | 9643615 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9643416 | 9643505 | 9643416 | ID=MS.gene28163.t1.exon8;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9643416 | 9643505 | 9643416 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9643007 | 9643058 | 9643007 | ID=MS.gene28163.t1.exon9;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9643007 | 9643058 | 9643007 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9642311 | 9642372 | 9642311 | ID=MS.gene28163.t1.exon10;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9642311 | 9642372 | 9642311 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9642101 | 9642181 | 9642101 | ID=MS.gene28163.t1.exon11;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9642101 | 9642181 | 9642101 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| chr4.4 | exon | 9641786 | 9641932 | 9641786 | ID=MS.gene28163.t1.exon12;Parent=MS.gene28163.t1 |
| chr4.4 | CDS | 9641786 | 9641932 | 9641786 | ID=cds.MS.gene28163.t1;Parent=MS.gene28163.t1 |
| Gene Sequence |
| Protein sequence |
