Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057371.t1 | XP_013441671.1 | 95.6 | 159 | 7 | 0 | 1 | 159 | 1 | 159 | 3.20E-83 | 318.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057371.t1 | Q9ZUF7 | 55.8 | 156 | 63 | 2 | 7 | 162 | 4 | 153 | 9.1e-47 | 188.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057371.t1 | G7IGE6 | 95.6 | 159 | 7 | 0 | 1 | 159 | 1 | 159 | 2.3e-83 | 318.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050646 | MS.gene057371 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene057371 | 0.814979 | 1.17E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene057371 | 0.837264 | 5.76E-57 | -1.69E-46 |
| MS.gene057371 | MS.gene060244 | 0.803678 | 3.11E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene060932 | 0.800216 | 1.60E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene064243 | 0.808128 | 3.61E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene065069 | 0.80403 | 2.63E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene06551 | -0.809458 | 1.87E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene06643 | 0.832454 | 9.37E-56 | -1.69E-46 |
| MS.gene057371 | MS.gene06740 | 0.811347 | 7.33E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene067410 | 0.817824 | 2.70E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene06857 | 0.847639 | 1.02E-59 | -1.69E-46 |
| MS.gene057371 | MS.gene069415 | 0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene06958 | 0.808883 | 2.49E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene070713 | -0.819613 | 1.06E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene070918 | 0.826316 | 2.90E-54 | -1.69E-46 |
| MS.gene057371 | MS.gene071073 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene071074 | 0.819932 | 8.96E-53 | -1.69E-46 |
| MS.gene057371 | MS.gene071076 | 0.830307 | 3.16E-55 | -1.69E-46 |
| MS.gene057371 | MS.gene072153 | 0.843971 | 1.01E-58 | -1.69E-46 |
| MS.gene057371 | MS.gene073016 | -0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene073132 | 0.800746 | 1.25E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene073390 | 0.827836 | 1.26E-54 | -1.69E-46 |
| MS.gene057371 | MS.gene073400 | 0.801475 | 8.85E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene074329 | 0.807926 | 3.98E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene074604 | 0.81625 | 6.09E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene074607 | 0.808746 | 2.66E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene07510 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene07878 | 0.807363 | 5.24E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene20077 | 0.803344 | 3.65E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene20554 | 0.809588 | 1.76E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene21770 | 0.8107 | 1.01E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene22419 | 0.802883 | 4.54E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene22513 | 0.800003 | 1.77E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene22516 | 0.809234 | 2.09E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene22695 | 0.800691 | 1.28E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene22705 | 0.808809 | 2.58E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene23902 | 0.803185 | 3.93E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene24903 | 0.801064 | 1.07E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene25669 | 0.817081 | 3.97E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene25676 | 0.803991 | 2.68E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene27997 | 0.83067 | 2.58E-55 | -1.69E-46 |
| MS.gene057371 | MS.gene28820 | 0.807438 | 5.05E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene31305 | 0.808411 | 3.14E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene31904 | 0.811797 | 5.85E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene32688 | 0.813422 | 2.58E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene33135 | 0.805553 | 1.26E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene34691 | 0.806396 | 8.40E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene35323 | 0.801142 | 1.04E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene36571 | 0.853222 | 2.76E-61 | -1.69E-46 |
| MS.gene057371 | MS.gene39037 | 0.805668 | 1.19E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene40093 | 0.800099 | 1.69E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene40518 | 0.801024 | 1.09E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene41597 | 0.817241 | 3.65E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene41840 | 0.808326 | 3.27E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene42653 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene42783 | 0.800131 | 1.66E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene42821 | 0.809202 | 2.13E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene43447 | 0.817633 | 2.98E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene43838 | 0.80409 | 2.55E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene44179 | 0.809184 | 2.14E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene44621 | 0.800726 | 1.26E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene45281 | 0.825206 | 5.32E-54 | -1.69E-46 |
| MS.gene057371 | MS.gene45524 | 0.805707 | 1.17E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene47967 | 0.824749 | 6.82E-54 | -1.69E-46 |
| MS.gene057371 | MS.gene49422 | 0.808283 | 3.34E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene51789 | 0.804234 | 2.38E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene53464 | 0.808457 | 3.07E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene54377 | 0.812844 | 3.46E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene54380 | 0.808119 | 3.62E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene56441 | 0.805629 | 1.22E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene57028 | 0.807183 | 5.73E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene57360 | 0.825197 | 5.34E-54 | -1.69E-46 |
| MS.gene057371 | MS.gene57783 | 0.804678 | 1.93E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene57980 | 0.807738 | 4.36E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene58053 | 0.80286 | 4.59E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene58134 | 0.81212 | 4.97E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene58284 | 0.806659 | 7.39E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene58627 | 0.811684 | 6.19E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene59215 | 0.80313 | 4.04E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene59417 | 0.802473 | 5.52E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene59697 | 0.832863 | 7.42E-56 | -1.69E-46 |
| MS.gene057371 | MS.gene60399 | 0.802906 | 4.49E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene61202 | 0.80387 | 2.84E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene61239 | 0.803081 | 4.13E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene63930 | 0.80433 | 2.27E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene64450 | 0.848253 | 6.89E-60 | -1.69E-46 |
| MS.gene057371 | MS.gene65095 | 0.813602 | 2.36E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene66962 | 0.809602 | 1.74E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene67099 | 0.800763 | 1.24E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene68654 | 0.80178 | 7.66E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene68713 | 0.810819 | 9.54E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene70600 | 0.801384 | 9.24E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene71597 | 0.807256 | 5.52E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene71681 | 0.801863 | 7.37E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene71940 | 0.803068 | 4.16E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene73513 | 0.811535 | 6.67E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene74537 | 0.801464 | 8.90E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene74604 | 0.816441 | 5.52E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene74932 | 0.820899 | 5.37E-53 | -1.69E-46 |
| MS.gene057371 | MS.gene75067 | 0.806633 | 7.48E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene75072 | 0.801955 | 7.05E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene75113 | 0.802082 | 6.64E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene76108 | 0.819162 | 1.34E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene77356 | 0.823853 | 1.11E-53 | -1.69E-46 |
| MS.gene057371 | MS.gene77361 | 0.833089 | 6.51E-56 | -1.69E-46 |
| MS.gene057371 | MS.gene79021 | 0.815784 | 7.74E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene80094 | 0.800876 | 1.17E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene80201 | 0.805021 | 1.63E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene80631 | 0.805637 | 1.21E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene80715 | 0.80976 | 1.61E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene82325 | 0.804942 | 1.70E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene83538 | 0.815379 | 9.53E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene84179 | 0.815412 | 9.37E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene84186 | 0.804287 | 2.32E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene85936 | 0.815188 | 1.05E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene86036 | 0.800449 | 1.43E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene87989 | 0.81179 | 5.87E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene88032 | 0.804193 | 2.43E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene88649 | 0.823782 | 1.15E-53 | -1.69E-46 |
| MS.gene057371 | MS.gene88658 | 0.809476 | 1.86E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene89104 | 0.802362 | 5.81E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene89368 | 0.800204 | 1.61E-48 | -1.69E-46 |
| MS.gene057371 | MS.gene89985 | 0.811794 | 5.86E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene90604 | 0.804156 | 2.47E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene91416 | 0.803097 | 4.10E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene92320 | 0.811046 | 8.52E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene92340 | 0.822229 | 2.65E-53 | -1.69E-46 |
| MS.gene057371 | MS.gene92981 | 0.815886 | 7.35E-52 | -1.69E-46 |
| MS.gene057371 | MS.gene93004 | 0.807989 | 3.86E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene93728 | 0.809886 | 1.52E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene94674 | 0.834996 | 2.17E-56 | -1.69E-46 |
| MS.gene057371 | MS.gene95339 | 0.809557 | 1.78E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene95614 | 0.829399 | 5.26E-55 | -1.69E-46 |
| MS.gene057371 | MS.gene96191 | 0.809525 | 1.81E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene96324 | 0.813411 | 2.59E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene97030 | 0.803969 | 2.70E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene98394 | 0.801591 | 8.38E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene99858 | 0.804507 | 2.09E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057371.t1 | MTR_0650s0010 | 95.000 | 160 | 8 | 0 | 1 | 160 | 1 | 160 | 2.01e-111 | 318 |
| MS.gene057371.t1 | MTR_4g010180 | 30.061 | 163 | 102 | 5 | 1 | 162 | 1 | 152 | 1.40e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057371.t1 | AT2G05910 | 52.000 | 175 | 76 | 3 | 7 | 181 | 4 | 170 | 2.56e-59 | 185 |
| MS.gene057371.t1 | AT5G20640 | 45.679 | 162 | 83 | 3 | 4 | 161 | 9 | 169 | 1.04e-44 | 149 |
Find 58 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCTGGGACTTTGAGATTA+GGG | 0.292979 | 2.1:+50057170 | MS.gene057371:CDS |
| ACAATGCTGCAATGCTTGTC+AGG | 0.358681 | 2.1:-50057201 | None:intergenic |
| TACTACCTCTTTGATGAAAC+TGG | 0.370733 | 2.1:-50059577 | None:intergenic |
| TTAACCAAACATGAATTTCC+AGG | 0.375687 | 2.1:-50057099 | None:intergenic |
| TGGTTAAGAACAAAGGAATC+AGG | 0.379875 | 2.1:+50057115 | MS.gene057371:CDS |
| AGAACCTGGAAATTCATGTT+TGG | 0.410797 | 2.1:+50057095 | MS.gene057371:CDS |
| AAGGCTGGGACTTTGAGATT+AGG | 0.425248 | 2.1:+50057169 | MS.gene057371:CDS |
| TTCGTCGTCGCAGACGGTGT+TGG | 0.426654 | 2.1:+50056501 | MS.gene057371:CDS |
| TCGTCGTCGCAGACGGTGTT+GGG | 0.426913 | 2.1:+50056502 | MS.gene057371:CDS |
| CGGTGTTGGGTGTGAGGAAA+AGG | 0.429005 | 2.1:+50056515 | MS.gene057371:CDS |
| GTTGATGGTTGTGGAATTCA+TGG | 0.436790 | 2.1:+50056604 | MS.gene057371:CDS |
| GAAGAGTTGATTCTAAGAGA+TGG | 0.449712 | 2.1:+50056634 | MS.gene057371:CDS |
| TGATGAAACTGGCCTCGGTT+TGG | 0.450699 | 2.1:-50059566 | None:intergenic |
| ATCAGGATTGCAATTGAGCC+AGG | 0.456564 | 2.1:+50057132 | MS.gene057371:CDS |
| GGGCTGTTAGTAACAAAGGC+TGG | 0.459412 | 2.1:+50057154 | MS.gene057371:CDS |
| CACTCACAACACAGAGGCAG+CGG | 0.461017 | 2.1:+50059472 | MS.gene057371:CDS |
| TTGTCCCGTGTCTGCGTTCG+CGG | 0.465458 | 2.1:-50059449 | None:intergenic |
| TTTGCTTCTCATGCGTAGAA+AGG | 0.475993 | 2.1:+50056669 | MS.gene057371:CDS |
| CTCTAAGCATTTATAAGAAG+TGG | 0.485897 | 2.1:+50057019 | MS.gene057371:CDS |
| CTCTTTGATGAAACTGGCCT+CGG | 0.496597 | 2.1:-50059571 | None:intergenic |
| TGAAAATGTGCAGGGAGGTA+TGG | 0.497953 | 2.1:+50056990 | MS.gene057371:intron |
| CAACCACAGACGAAACAGAC+AGG | 0.499683 | 2.1:+50059388 | MS.gene057371:intron |
| GGTTATAGTGTAAACTATGA+AGG | 0.510131 | 2.1:+50057045 | MS.gene057371:CDS |
| CACTGATTGTAGGACTCAAA+AGG | 0.512818 | 2.1:+50056570 | MS.gene057371:CDS |
| CTATTGTTCGTCGTCGCAGA+CGG | 0.514860 | 2.1:+50056495 | MS.gene057371:CDS |
| CGGTGATGACGCCTTGGTCG+CGG | 0.515942 | 2.1:-50059528 | None:intergenic |
| GTGTCTGCGTTCGCGGCGGT+CGG | 0.522998 | 2.1:-50059442 | None:intergenic |
| CCTTTGTTACTAACAGCCCC+TGG | 0.527858 | 2.1:-50057150 | None:intergenic |
| GACCGCCGCGAACGCAGACA+CGG | 0.532733 | 2.1:+50059444 | MS.gene057371:CDS |
| GGCTGTTAGTAACAAAGGCT+GGG | 0.537091 | 2.1:+50057155 | MS.gene057371:CDS |
| CAATAGAGTTTACTAACGAT+TGG | 0.539463 | 2.1:-50056478 | None:intergenic |
| CGCAGACGGTGTTGGGTGTG+AGG | 0.540715 | 2.1:+50056509 | MS.gene057371:CDS |
| AGCATTTATAAGAAGTGGAA+AGG | 0.545640 | 2.1:+50057024 | MS.gene057371:CDS |
| ACCGCCGCGAACGCAGACAC+GGG | 0.546536 | 2.1:+50059445 | MS.gene057371:CDS |
| TCATGTTTGGTTAAGAACAA+AGG | 0.548192 | 2.1:+50057108 | MS.gene057371:CDS |
| CCACATGTAGTGAGTGGTGG+TGG | 0.563567 | 2.1:+50056538 | MS.gene057371:CDS |
| GTATTCAGCTTAAAAGAACC+TGG | 0.563706 | 2.1:+50057081 | MS.gene057371:CDS |
| CCAGGGGCTGTTAGTAACAA+AGG | 0.575524 | 2.1:+50057150 | MS.gene057371:CDS |
| GCTCGTCGGTGATGACGCCT+TGG | 0.576262 | 2.1:-50059534 | None:intergenic |
| GGCTGGGACTTTGAGATTAG+GGG | 0.576442 | 2.1:+50057171 | MS.gene057371:CDS |
| TCACGTGACCACCGCGACCA+AGG | 0.581061 | 2.1:+50059517 | MS.gene057371:CDS |
| TAGAGGCAACATAGTAGCAC+AGG | 0.581579 | 2.1:+50057230 | MS.gene057371:CDS |
| TGCAGCATTGTTGATACTAG+AGG | 0.590465 | 2.1:+50057213 | MS.gene057371:CDS |
| CAATGCTGCAATGCTTGTCA+GGG | 0.592241 | 2.1:-50057200 | None:intergenic |
| TTTGGTTGTGCAGAGCTCGT+CGG | 0.600003 | 2.1:-50059548 | None:intergenic |
| TCAGGATTGCAATTGAGCCA+GGG | 0.612778 | 2.1:+50057133 | MS.gene057371:CDS |
| CAGGATTGCAATTGAGCCAG+GGG | 0.617829 | 2.1:+50057134 | MS.gene057371:CDS |
| CGAGGCCAGTTTCATCAAAG+AGG | 0.628384 | 2.1:+50059572 | MS.gene057371:CDS |
| CCACCACCACTCACTACATG+TGG | 0.632877 | 2.1:-50056538 | None:intergenic |
| TCCCGTGTCTGCGTTCGCGG+CGG | 0.638252 | 2.1:-50059446 | None:intergenic |
| TGTGCAGGGAGGTATGGTTG+AGG | 0.645663 | 2.1:+50056996 | MS.gene057371:intron |
| TGATGACGCCTTGGTCGCGG+TGG | 0.646313 | 2.1:-50059525 | None:intergenic |
| TCGGTTTGCGATGATTGTTG+CGG | 0.648469 | 2.1:-50059423 | None:intergenic |
| AAAAGGCCACATGTAGTGAG+TGG | 0.660839 | 2.1:+50056532 | MS.gene057371:CDS |
| TTGATGGTTGTGGAATTCAT+GGG | 0.667824 | 2.1:+50056605 | MS.gene057371:CDS |
| GGACAACACTCACAACACAG+AGG | 0.675922 | 2.1:+50059466 | MS.gene057371:CDS |
| AGGCCACATGTAGTGAGTGG+TGG | 0.689979 | 2.1:+50056535 | MS.gene057371:CDS |
| AGCTCTGCACAACCAAACCG+AGG | 0.725349 | 2.1:+50059554 | MS.gene057371:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATTAAAAAAAAAAATG+AGG | - | chr2.1:50058640-50058659 | None:intergenic | 10.0% |
| !! | TGTATATTAGTAAAAAATTA+CGG | - | chr2.1:50057347-50057366 | None:intergenic | 10.0% |
| !!! | TTATATTTTTTGGATTTTTA+TGG | - | chr2.1:50058874-50058893 | None:intergenic | 10.0% |
| !!! | TTTATAAGTAATTAGATTTT+TGG | + | chr2.1:50057553-50057572 | MS.gene057371:intron | 10.0% |
| !!! | TTTTTTTTTTAATTCTTAGT+CGG | + | chr2.1:50058643-50058662 | MS.gene057371:intron | 10.0% |
| !! | ATGAAAAACCAATATAATAT+TGG | + | chr2.1:50058248-50058267 | MS.gene057371:intron | 15.0% |
| !! | ATTATTATACGCATAAATAT+TGG | - | chr2.1:50057259-50057278 | None:intergenic | 15.0% |
| !! | CTATATATAAACAAAACATA+AGG | - | chr2.1:50058512-50058531 | None:intergenic | 15.0% |
| !! | TTATTATACGCATAAATATT+GGG | - | chr2.1:50057258-50057277 | None:intergenic | 15.0% |
| !!! | AAAATTACACATTTTCAAAT+GGG | - | chr2.1:50057307-50057326 | None:intergenic | 15.0% |
| !!! | CTTATGTTTTGTTTATATAT+AGG | + | chr2.1:50058510-50058529 | MS.gene057371:intron | 15.0% |
| !!! | TTTCATTTTATATTGTGTAT+AGG | + | chr2.1:50056773-50056792 | MS.gene057371:intron | 15.0% |
| !! | AAAAGTAGAAACTCATATAT+TGG | + | chr2.1:50057913-50057932 | MS.gene057371:intron | 20.0% |
| !! | AAAGAATCAAAAGAGATATA+AGG | - | chr2.1:50056934-50056953 | None:intergenic | 20.0% |
| !! | AAATAAAAATTGAGAGAAGA+GGG | - | chr2.1:50058670-50058689 | None:intergenic | 20.0% |
| !! | ATGAATTGCATTGTATATTA+TGG | + | chr2.1:50058347-50058366 | MS.gene057371:intron | 20.0% |
| !! | TAAATAAAAATTGAGAGAAG+AGG | - | chr2.1:50058671-50058690 | None:intergenic | 20.0% |
| !! | TATTTGAGCCAATATTATAT+TGG | - | chr2.1:50058259-50058278 | None:intergenic | 20.0% |
| !!! | CAAAATTACACATTTTCAAA+TGG | - | chr2.1:50057308-50057327 | None:intergenic | 20.0% |
| !!! | CTACTTTTAATTAAACTTAG+TGG | - | chr2.1:50057901-50057920 | None:intergenic | 20.0% |
| !!! | GTTAGAAATCAATTCATTTT+CGG | - | chr2.1:50057850-50057869 | None:intergenic | 20.0% |
| !!! | TATGTTTTATCTTGATAGAA+TGG | - | chr2.1:50057987-50058006 | None:intergenic | 20.0% |
| !!! | TTGGACTGAATTATATTTTT+TGG | - | chr2.1:50058884-50058903 | None:intergenic | 20.0% |
| ! | AATAAAAATTGAGAGAAGAG+GGG | - | chr2.1:50058669-50058688 | None:intergenic | 25.0% |
| ! | ATGAAAACTTCAAAGTGATA+TGG | - | chr2.1:50056759-50056778 | None:intergenic | 25.0% |
| ! | ATTTGCAGGTTAATTGAAAT+TGG | - | chr2.1:50059259-50059278 | None:intergenic | 25.0% |
| ! | TAGAATGGCTTAACTATATA+TGG | - | chr2.1:50057972-50057991 | None:intergenic | 25.0% |
| ! | TGGAAAAAAACAACAAAAGT+TGG | - | chr2.1:50057881-50057900 | None:intergenic | 25.0% |
| ! | TTGGATTAATTAGCAATATG+TGG | - | chr2.1:50058184-50058203 | None:intergenic | 25.0% |
| !! | TGAAAAATGAAATGATTTGC+AGG | - | chr2.1:50059273-50059292 | None:intergenic | 25.0% |
| !! | TTGTTGATTAATGTGTATAC+AGG | + | chr2.1:50058029-50058048 | MS.gene057371:intron | 25.0% |
| !!! | AATAATTTTTTTAGGCGAGT+TGG | + | chr2.1:50057726-50057745 | MS.gene057371:intron | 25.0% |
| !!! | ATAATTTTTTTAGGCGAGTT+GGG | + | chr2.1:50057727-50057746 | MS.gene057371:intron | 25.0% |
| !!! | ATTTCATTTTGAAAATGTGC+AGG | + | chr2.1:50056981-50057000 | MS.gene057371:intron | 25.0% |
| !!! | TTTCATTTTGAAAATGTGCA+GGG | + | chr2.1:50056982-50057001 | MS.gene057371:intron | 25.0% |
| AATTACGGTCAAAGTAAGTT+AGG | - | chr2.1:50057332-50057351 | None:intergenic | 30.0% | |
| ACAAACGAACCATATTTGTA+GGG | - | chr2.1:50057600-50057619 | None:intergenic | 30.0% | |
| AGCATTTATAAGAAGTGGAA+AGG | + | chr2.1:50057024-50057043 | MS.gene057371:CDS | 30.0% | |
| AGTGTGTTAGGTCAAAAATT+GGG | - | chr2.1:50058544-50058563 | None:intergenic | 30.0% | |
| ATATCATGTAGTTGTGAAAC+CGG | + | chr2.1:50058098-50058117 | MS.gene057371:intron | 30.0% | |
| ATGGATGAAAGAAGAAAACA+CGG | - | chr2.1:50058917-50058936 | None:intergenic | 30.0% | |
| CAAAACATTGAGATATGTTC+TGG | - | chr2.1:50057771-50057790 | None:intergenic | 30.0% | |
| CAATAGAGTTTACTAACGAT+TGG | - | chr2.1:50056481-50056500 | None:intergenic | 30.0% | |
| CTCTAAGCATTTATAAGAAG+TGG | + | chr2.1:50057019-50057038 | MS.gene057371:CDS | 30.0% | |
| CTGATTATGAGACTAATATG+TGG | + | chr2.1:50057621-50057640 | MS.gene057371:intron | 30.0% | |
| GATTAATGTGTATACAGGTT+GGG | + | chr2.1:50058034-50058053 | MS.gene057371:intron | 30.0% | |
| GGTTATAGTGTAAACTATGA+AGG | + | chr2.1:50057045-50057064 | MS.gene057371:CDS | 30.0% | |
| TAAAGAAGTGGAGAAATTGA+TGG | + | chr2.1:50058062-50058081 | MS.gene057371:intron | 30.0% | |
| TCAACTGTGTCAAGTATTAT+GGG | + | chr2.1:50057505-50057524 | MS.gene057371:intron | 30.0% | |
| TCATGTTTGGTTAAGAACAA+AGG | + | chr2.1:50057108-50057127 | MS.gene057371:CDS | 30.0% | |
| TGATTAATGTGTATACAGGT+TGG | + | chr2.1:50058033-50058052 | MS.gene057371:intron | 30.0% | |
| TTAACCAAACATGAATTTCC+AGG | - | chr2.1:50057102-50057121 | None:intergenic | 30.0% | |
| TTACATATGCATCAATGTGA+TGG | - | chr2.1:50058292-50058311 | None:intergenic | 30.0% | |
| ! | ATAGGTATTGTTTGTTCGAA+GGG | + | chr2.1:50056791-50056810 | MS.gene057371:intron | 30.0% |
| ! | TATAGGTATTGTTTGTTCGA+AGG | + | chr2.1:50056790-50056809 | MS.gene057371:intron | 30.0% |
| ! | TGAATTGATTTCTAACCAAC+TGG | + | chr2.1:50057854-50057873 | MS.gene057371:intron | 30.0% |
| ! | TGACTTTTCAGTGGAAATTT+CGG | + | chr2.1:50058594-50058613 | MS.gene057371:intron | 30.0% |
| !!! | ATGGATCAAGCTTTTGTTTT+TGG | + | chr2.1:50058123-50058142 | MS.gene057371:intron | 30.0% |
| !!! | ATTTTGATTGGGTTATGGTT+TGG | - | chr2.1:50059326-50059345 | None:intergenic | 30.0% |
| !!! | GATATGCCATTTTGCAAAAA+GGG | + | chr2.1:50057946-50057965 | MS.gene057371:intron | 30.0% |
| !!! | TGATATGCCATTTTGCAAAA+AGG | + | chr2.1:50057945-50057964 | MS.gene057371:intron | 30.0% |
| !!! | TGATTGGTTTTTGTGAGTTT+CGG | - | chr2.1:50059140-50059159 | None:intergenic | 30.0% |
| !!! | TTTGGATTTTGATTGGGTTA+TGG | - | chr2.1:50059331-50059350 | None:intergenic | 30.0% |
| AATTTGCAGATTTGCGTGAT+TGG | - | chr2.1:50059156-50059175 | None:intergenic | 35.0% | |
| AGAACCTGGAAATTCATGTT+TGG | + | chr2.1:50057095-50057114 | MS.gene057371:CDS | 35.0% | |
| ATATGCATCAATGTGATGGT+AGG | - | chr2.1:50058288-50058307 | None:intergenic | 35.0% | |
| CACAAACGAACCATATTTGT+AGG | - | chr2.1:50057601-50057620 | None:intergenic | 35.0% | |
| CAGTGTGTTAGGTCAAAAAT+TGG | - | chr2.1:50058545-50058564 | None:intergenic | 35.0% | |
| CCATTATTCAAACCCATCAT+CGG | + | chr2.1:50059358-50059377 | MS.gene057371:intron | 35.0% | |
| CTTGAGTATCCCTACAAATA+TGG | + | chr2.1:50057588-50057607 | MS.gene057371:intron | 35.0% | |
| GCTACACTTGACTACATTTA+TGG | + | chr2.1:50058153-50058172 | MS.gene057371:intron | 35.0% | |
| GGAGAAATTGATGGAAAACA+AGG | + | chr2.1:50058071-50058090 | MS.gene057371:intron | 35.0% | |
| GGTTGGGATAAATAAAGAAG+TGG | + | chr2.1:50058050-50058069 | MS.gene057371:intron | 35.0% | |
| GTATTCAGCTTAAAAGAACC+TGG | + | chr2.1:50057081-50057100 | MS.gene057371:CDS | 35.0% | |
| GTCAACTGTGTCAAGTATTA+TGG | + | chr2.1:50057504-50057523 | MS.gene057371:intron | 35.0% | |
| GTGTGTTAGGTCAAAAATTG+GGG | - | chr2.1:50058543-50058562 | None:intergenic | 35.0% | |
| TAAAGCATGCAGCTACATAT+GGG | + | chr2.1:50058309-50058328 | MS.gene057371:intron | 35.0% | |
| TATCATGTAGTTGTGAAACC+GGG | + | chr2.1:50058099-50058118 | MS.gene057371:intron | 35.0% | |
| TGGGTTTGAATAATGGTTGT+CGG | - | chr2.1:50059354-50059373 | None:intergenic | 35.0% | |
| TGGTTAAGAACAAAGGAATC+AGG | + | chr2.1:50057115-50057134 | MS.gene057371:CDS | 35.0% | |
| TTAAGAGAGCAGAAAAACTG+TGG | - | chr2.1:50059032-50059051 | None:intergenic | 35.0% | |
| ! | AACTAACCAGGTTCTAATGT+TGG | + | chr2.1:50057798-50057817 | MS.gene057371:intron | 35.0% |
| ! | ATAAAGACTTGTTCGTGCTT+TGG | - | chr2.1:50057665-50057684 | None:intergenic | 35.0% |
| ! | ATATGGCCCTTTTTGCAAAA+TGG | - | chr2.1:50057955-50057974 | None:intergenic | 35.0% |
| ! | CAAGTTTTTGTGTTGTCCAT+CGG | - | chr2.1:50059115-50059134 | None:intergenic | 35.0% |
| ! | GAAGAGTTGATTCTAAGAGA+TGG | + | chr2.1:50056634-50056653 | MS.gene057371:CDS | 35.0% |
| ! | GGTTTGTGGATTGAAAATTG+CGG | - | chr2.1:50059185-50059204 | None:intergenic | 35.0% |
| ! | TTGAATAATGGTTGTCGGTT+TGG | - | chr2.1:50059349-50059368 | None:intergenic | 35.0% |
| ! | TTGATGGTTGTGGAATTCAT+GGG | + | chr2.1:50056605-50056624 | MS.gene057371:CDS | 35.0% |
| !! | AAGGTTGTTTTCAAGGTTGA+TGG | + | chr2.1:50056589-50056608 | MS.gene057371:CDS | 35.0% |
| !! | GACTCAAAAGGTTGTTTTCA+AGG | + | chr2.1:50056582-50056601 | MS.gene057371:CDS | 35.0% |
| !! | GTTTTGTAGTCACTGATTGT+AGG | + | chr2.1:50056560-50056579 | MS.gene057371:CDS | 35.0% |
| !! | TTTTGAGAGTTCAACTAACC+AGG | + | chr2.1:50057786-50057805 | MS.gene057371:intron | 35.0% |
| !!! | TGTCGGTTTGGATTTTGATT+GGG | - | chr2.1:50059337-50059356 | None:intergenic | 35.0% |
| !!! | TTGTCGGTTTGGATTTTGAT+TGG | - | chr2.1:50059338-50059357 | None:intergenic | 35.0% |
| ATCATGTAGTTGTGAAACCG+GGG | + | chr2.1:50058100-50058119 | MS.gene057371:intron | 40.0% | |
| CACGCACAATTTCCACAAAA+CGG | + | chr2.1:50059291-50059310 | MS.gene057371:intron | 40.0% | |
| CTGTGTCAAGTATTATGGGA+CGG | + | chr2.1:50057509-50057528 | MS.gene057371:intron | 40.0% | |
| GCTCTCTTAACAAACCCTAA+GGG | + | chr2.1:50059042-50059061 | MS.gene057371:intron | 40.0% | |
| GGTTGTTTGATTCCGATGAT+GGG | - | chr2.1:50059373-50059392 | None:intergenic | 40.0% | |
| GTAAAGCATGCAGCTACATA+TGG | + | chr2.1:50058308-50058327 | MS.gene057371:intron | 40.0% | |
| GTGAGTTTGTGTGTATGTGT+TGG | - | chr2.1:50059230-50059249 | None:intergenic | 40.0% | |
| TGCAGCATTGTTGATACTAG+AGG | + | chr2.1:50057213-50057232 | MS.gene057371:CDS | 40.0% | |
| TGCTCTCTTAACAAACCCTA+AGG | + | chr2.1:50059041-50059060 | MS.gene057371:intron | 40.0% | |
| TGGTTGTTTGATTCCGATGA+TGG | - | chr2.1:50059374-50059393 | None:intergenic | 40.0% | |
| TTCAAATGGGTCATCTATCG+CGG | - | chr2.1:50057294-50057313 | None:intergenic | 40.0% | |
| TTTGCTTCTCATGCGTAGAA+AGG | + | chr2.1:50056669-50056688 | MS.gene057371:CDS | 40.0% | |
| ! | ACAACAAAAGTTGGTCCAGT+TGG | - | chr2.1:50057872-50057891 | None:intergenic | 40.0% |
| ! | AGGATAGGTTTGTTTGTTGC+TGG | - | chr2.1:50058999-50059018 | None:intergenic | 40.0% |
| ! | ATGCTAGCTCTTCACAACTT+TGG | - | chr2.1:50058203-50058222 | None:intergenic | 40.0% |
| ! | CACTGATTGTAGGACTCAAA+AGG | + | chr2.1:50056570-50056589 | MS.gene057371:CDS | 40.0% |
| ! | GCGTGCGACTGTTATTTATA+GGG | - | chr2.1:50059078-50059097 | None:intergenic | 40.0% |
| ! | TGCGTGCGACTGTTATTTAT+AGG | - | chr2.1:50059079-50059098 | None:intergenic | 40.0% |
| !! | CAGGTTCTAATGTTGGTAGT+GGG | + | chr2.1:50057805-50057824 | MS.gene057371:intron | 40.0% |
| !! | CATTTTGAAAATGTGCAGGG+AGG | + | chr2.1:50056985-50057004 | MS.gene057371:intron | 40.0% |
| !! | CCGATGATGGGTTTGAATAA+TGG | - | chr2.1:50059361-50059380 | None:intergenic | 40.0% |
| !! | GTTGATGGTTGTGGAATTCA+TGG | + | chr2.1:50056604-50056623 | MS.gene057371:CDS | 40.0% |
| !! | TTTAGTATCGACAGGCTGTT+TGG | - | chr2.1:50058946-50058965 | None:intergenic | 40.0% |
| !!! | AAAACACGGCTGTGTTGTTT+TGG | - | chr2.1:50058903-50058922 | None:intergenic | 40.0% |
| !!! | GTTTTCAAGGTTGATGGTTG+TGG | + | chr2.1:50056595-50056614 | MS.gene057371:CDS | 40.0% |
| AAAAGGCCACATGTAGTGAG+TGG | + | chr2.1:50056532-50056551 | MS.gene057371:CDS | 45.0% | |
| ACAAAAGCTTGATCCATCCC+CGG | - | chr2.1:50058120-50058139 | None:intergenic | 45.0% | |
| ACAATGCTGCAATGCTTGTC+AGG | - | chr2.1:50057204-50057223 | None:intergenic | 45.0% | |
| ACAGGCTGTTTGGATGTGAA+TGG | - | chr2.1:50058936-50058955 | None:intergenic | 45.0% | |
| AGAAAAACTGTGGCTTGAGG+AGG | - | chr2.1:50059022-50059041 | None:intergenic | 45.0% | |
| AGCAGAAAAACTGTGGCTTG+AGG | - | chr2.1:50059025-50059044 | None:intergenic | 45.0% | |
| AGGGAAAGACTTTGCCCTTA+GGG | - | chr2.1:50059059-50059078 | None:intergenic | 45.0% | |
| ATCAGGATTGCAATTGAGCC+AGG | + | chr2.1:50057132-50057151 | MS.gene057371:CDS | 45.0% | |
| CAATGCTGCAATGCTTGTCA+GGG | - | chr2.1:50057203-50057222 | None:intergenic | 45.0% | |
| CCACTACCAACATTAGAACC+TGG | - | chr2.1:50057807-50057826 | None:intergenic | 45.0% | |
| GGCTGTTAGTAACAAAGGCT+GGG | + | chr2.1:50057155-50057174 | MS.gene057371:CDS | 45.0% | |
| GTCAAGTATTATGGGACGGA+GGG | + | chr2.1:50057513-50057532 | MS.gene057371:intron | 45.0% | |
| TAGAGGCAACATAGTAGCAC+AGG | + | chr2.1:50057230-50057249 | MS.gene057371:CDS | 45.0% | |
| TAGGGAAAGACTTTGCCCTT+AGG | - | chr2.1:50059060-50059079 | None:intergenic | 45.0% | |
| TCAAATGGGTCATCTATCGC+GGG | - | chr2.1:50057293-50057312 | None:intergenic | 45.0% | |
| TCAGGATTGCAATTGAGCCA+GGG | + | chr2.1:50057133-50057152 | MS.gene057371:CDS | 45.0% | |
| TCTGTATGTAACGTGAGTGC+AGG | - | chr2.1:50059206-50059225 | None:intergenic | 45.0% | |
| TGAAAAGTCAGAGACCGATC+AGG | - | chr2.1:50058584-50058603 | None:intergenic | 45.0% | |
| TGAAAATGTGCAGGGAGGTA+TGG | + | chr2.1:50056990-50057009 | MS.gene057371:intron | 45.0% | |
| TGTCAAGTATTATGGGACGG+AGG | + | chr2.1:50057512-50057531 | MS.gene057371:intron | 45.0% | |
| TTGACGACGAGGAATGAACT+TGG | - | chr2.1:50058975-50058994 | None:intergenic | 45.0% | |
| TTGTTCGTGCTTTGGTTAGG+AGG | - | chr2.1:50057657-50057676 | None:intergenic | 45.0% | |
| ! | ATCGGTCTCTGACTTTTCAG+TGG | + | chr2.1:50058585-50058604 | MS.gene057371:intron | 45.0% |
| ! | CCAGGTTCTAATGTTGGTAG+TGG | + | chr2.1:50057804-50057823 | MS.gene057371:intron | 45.0% |
| ! | CTCTTTGATGAAACTGGCCT+CGG | - | chr2.1:50059574-50059593 | None:intergenic | 45.0% |
| ! | GACTTGTTCGTGCTTTGGTT+AGG | - | chr2.1:50057660-50057679 | None:intergenic | 45.0% |
| ! | TCGGTTTGCGATGATTGTTG+CGG | - | chr2.1:50059426-50059445 | None:intergenic | 45.0% |
| ! | TGGATCGTGATACCGTTTTG+TGG | - | chr2.1:50059306-50059325 | None:intergenic | 45.0% |
| !! | AAGGCTGGGACTTTGAGATT+AGG | + | chr2.1:50057169-50057188 | MS.gene057371:CDS | 45.0% |
| !! | AGGCTGGGACTTTGAGATTA+GGG | + | chr2.1:50057170-50057189 | MS.gene057371:CDS | 45.0% |
| !! | GGACTGGATTTAGTATCGAC+AGG | - | chr2.1:50058954-50058973 | None:intergenic | 45.0% |
| !! | TAATTAATTAAAATAAAAGA+TGG | - | chr2.1:50058709-50058728 | None:intergenic | 5.0% |
| !!! | ATTTTGATAATAATTTTTTT+AGG | + | chr2.1:50057718-50057737 | MS.gene057371:intron | 5.0% |
| AAAACTGTGGCTTGAGGAGG+AGG | - | chr2.1:50059019-50059038 | None:intergenic | 50.0% | |
| AGAGACCGATCAGGAACGAA+GGG | - | chr2.1:50058575-50058594 | None:intergenic | 50.0% | |
| AGTCGCACGCACACAGTTAA+GGG | + | chr2.1:50059088-50059107 | MS.gene057371:intron | 50.0% | |
| CAACCACAGACGAAACAGAC+AGG | + | chr2.1:50059388-50059407 | MS.gene057371:intron | 50.0% | |
| CAGGATTGCAATTGAGCCAG+GGG | + | chr2.1:50057134-50057153 | MS.gene057371:CDS | 50.0% | |
| CAGTGGAAATTTCGGCAGAG+AGG | + | chr2.1:50058602-50058621 | MS.gene057371:intron | 50.0% | |
| CCAGGGGCTGTTAGTAACAA+AGG | + | chr2.1:50057150-50057169 | MS.gene057371:CDS | 50.0% | |
| CCTTTGTTACTAACAGCCCC+TGG | - | chr2.1:50057153-50057172 | None:intergenic | 50.0% | |
| CGAGGCCAGTTTCATCAAAG+AGG | + | chr2.1:50059572-50059591 | MS.gene057371:CDS | 50.0% | |
| CTATTGTTCGTCGTCGCAGA+CGG | + | chr2.1:50056495-50056514 | MS.gene057371:CDS | 50.0% | |
| GACGAGGAATGAACTTGGAC+TGG | - | chr2.1:50058970-50058989 | None:intergenic | 50.0% | |
| GGACAACACTCACAACACAG+AGG | + | chr2.1:50059466-50059485 | MS.gene057371:CDS | 50.0% | |
| GGGCTGTTAGTAACAAAGGC+TGG | + | chr2.1:50057154-50057173 | MS.gene057371:CDS | 50.0% | |
| GTAACGTGAGTGCAGGTTTG+TGG | - | chr2.1:50059199-50059218 | None:intergenic | 50.0% | |
| GTTCCTGTCTGTTTCGTCTG+TGG | - | chr2.1:50059394-50059413 | None:intergenic | 50.0% | |
| TGTAGTTGTGAAACCGGGGA+TGG | + | chr2.1:50058104-50058123 | MS.gene057371:intron | 50.0% | |
| TTGTTGCTGGATTGACGACG+AGG | - | chr2.1:50058986-50059005 | None:intergenic | 50.0% | |
| TTTGGTTGTGCAGAGCTCGT+CGG | - | chr2.1:50059551-50059570 | None:intergenic | 50.0% | |
| ! | TGATGAAACTGGCCTCGGTT+TGG | - | chr2.1:50059569-50059588 | None:intergenic | 50.0% |
| ! | TTTAGGCGAGTTGGGTCTTG+AGG | + | chr2.1:50057735-50057754 | MS.gene057371:intron | 50.0% |
| !! | GGCTGGGACTTTGAGATTAG+GGG | + | chr2.1:50057171-50057190 | MS.gene057371:CDS | 50.0% |
| ACGTGCCCTTCGTTCCTGAT+CGG | + | chr2.1:50058567-50058586 | MS.gene057371:intron | 55.0% | |
| AGCTCTGCACAACCAAACCG+AGG | + | chr2.1:50059554-50059573 | MS.gene057371:CDS | 55.0% | |
| AGGCCACATGTAGTGAGTGG+TGG | + | chr2.1:50056535-50056554 | MS.gene057371:CDS | 55.0% | |
| AGGGCACGTGTCAGTGTGTT+AGG | - | chr2.1:50058556-50058575 | None:intergenic | 55.0% | |
| ATGGGTCATCTATCGCGGGA+AGG | - | chr2.1:50057289-50057308 | None:intergenic | 55.0% | |
| CACTCACAACACAGAGGCAG+CGG | + | chr2.1:50059472-50059491 | MS.gene057371:CDS | 55.0% | |
| CAGAGACCGATCAGGAACGA+AGG | - | chr2.1:50058576-50058595 | None:intergenic | 55.0% | |
| CAGTCGCACGCACACAGTTA+AGG | + | chr2.1:50059087-50059106 | MS.gene057371:intron | 55.0% | |
| CCACATGTAGTGAGTGGTGG+TGG | + | chr2.1:50056538-50056557 | MS.gene057371:CDS | 55.0% | |
| CCACCACCACTCACTACATG+TGG | - | chr2.1:50056541-50056560 | None:intergenic | 55.0% | |
| GTCATCTATCGCGGGAAGGA+GGG | - | chr2.1:50057285-50057304 | None:intergenic | 55.0% | |
| GTCGCACGCACACAGTTAAG+GGG | + | chr2.1:50059089-50059108 | MS.gene057371:intron | 55.0% | |
| TGTGGCTTGAGGAGGAGGAT+AGG | - | chr2.1:50059014-50059033 | None:intergenic | 55.0% | |
| ! | CGGTGTTGGGTGTGAGGAAA+AGG | + | chr2.1:50056515-50056534 | MS.gene057371:CDS | 55.0% |
| ! | TGTGCAGGGAGGTATGGTTG+AGG | + | chr2.1:50056996-50057015 | MS.gene057371:intron | 55.0% |
| GCACACAGTTAAGGGGCCGA+TGG | + | chr2.1:50059096-50059115 | MS.gene057371:intron | 60.0% | |
| GGTCATCTATCGCGGGAAGG+AGG | - | chr2.1:50057286-50057305 | None:intergenic | 60.0% | |
| TCGTCGTCGCAGACGGTGTT+GGG | + | chr2.1:50056502-50056521 | MS.gene057371:CDS | 60.0% | |
| TTCGTCGTCGCAGACGGTGT+TGG | + | chr2.1:50056501-50056520 | MS.gene057371:CDS | 60.0% | |
| TTGTCCCGTGTCTGCGTTCG+CGG | - | chr2.1:50059452-50059471 | None:intergenic | 60.0% | |
| TCACGTGACCACCGCGACCA+AGG | + | chr2.1:50059517-50059536 | MS.gene057371:CDS | 65.0% | |
| ! | CGCAGACGGTGTTGGGTGTG+AGG | + | chr2.1:50056509-50056528 | MS.gene057371:CDS | 65.0% |
| ! | CGGTGATGACGCCTTGGTCG+CGG | - | chr2.1:50059531-50059550 | None:intergenic | 65.0% |
| ! | GCTCGTCGGTGATGACGCCT+TGG | - | chr2.1:50059537-50059556 | None:intergenic | 65.0% |
| ! | TGATGACGCCTTGGTCGCGG+TGG | - | chr2.1:50059528-50059547 | None:intergenic | 65.0% |
| ACCGCCGCGAACGCAGACAC+GGG | + | chr2.1:50059445-50059464 | MS.gene057371:CDS | 70.0% | |
| GACCGCCGCGAACGCAGACA+CGG | + | chr2.1:50059444-50059463 | MS.gene057371:CDS | 70.0% | |
| GTGTCTGCGTTCGCGGCGGT+CGG | - | chr2.1:50059445-50059464 | None:intergenic | 70.0% | |
| TCCCGTGTCTGCGTTCGCGG+CGG | - | chr2.1:50059449-50059468 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 50056463 | 50059597 | 50056463 | ID=MS.gene057371 |
| chr2.1 | mRNA | 50056463 | 50059597 | 50056463 | ID=MS.gene057371.t1;Parent=MS.gene057371 |
| chr2.1 | exon | 50056463 | 50056690 | 50056463 | ID=MS.gene057371.t1.exon1;Parent=MS.gene057371.t1 |
| chr2.1 | CDS | 50056463 | 50056690 | 50056463 | ID=cds.MS.gene057371.t1;Parent=MS.gene057371.t1 |
| chr2.1 | exon | 50057003 | 50057251 | 50057003 | ID=MS.gene057371.t1.exon2;Parent=MS.gene057371.t1 |
| chr2.1 | CDS | 50057003 | 50057251 | 50057003 | ID=cds.MS.gene057371.t1;Parent=MS.gene057371.t1 |
| chr2.1 | exon | 50059397 | 50059597 | 50059397 | ID=MS.gene057371.t1.exon3;Parent=MS.gene057371.t1 |
| chr2.1 | CDS | 50059397 | 50059597 | 50059397 | ID=cds.MS.gene057371.t1;Parent=MS.gene057371.t1 |
| Gene Sequence |
| Protein sequence |
