Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066249.t1 | RHN81732.1 | 67.5 | 686 | 16 | 3 | 1 | 479 | 1 | 686 | 9.60E-239 | 835.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066249.t1 | Q9SZL8 | 38.7 | 313 | 189 | 3 | 165 | 476 | 397 | 707 | 3.5e-56 | 220.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066249.t1 | A0A396JW00 | 67.5 | 686 | 16 | 3 | 1 | 479 | 1 | 686 | 6.9e-239 | 835.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene066249 | 0.803919 | 2.77E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene066249 | 0.805681 | 1.19E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene066249 | 0.807403 | 5.14E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene066249 | 0.806399 | 8.38E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene066249 | 0.800069 | 1.71E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene066249 | 0.808843 | 2.54E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene066249 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene066249 | 0.809011 | 2.34E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene066249 | 0.821355 | 4.22E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene066249 | 0.810921 | 9.06E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene066249 | 0.809223 | 2.10E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene066249 | -0.832343 | 9.98E-56 | -1.69E-46 |
| MS.gene054467 | MS.gene066249 | 0.818409 | 1.99E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene066249 | 0.808455 | 3.07E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene066249 | 0.801979 | 6.97E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene066249 | 0.806233 | 9.09E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene066249 | 0.819166 | 1.34E-52 | -1.69E-46 |
| MS.gene054991 | MS.gene066249 | 0.802787 | 4.75E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene066249 | 0.801336 | 9.45E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene066249 | 0.822194 | 2.70E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene066249 | 0.811886 | 5.59E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene066249 | 0.815485 | 9.02E-52 | -1.69E-46 |
| MS.gene056162 | MS.gene066249 | 0.820814 | 5.62E-53 | -1.69E-46 |
| MS.gene056173 | MS.gene066249 | 0.812531 | 4.05E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene066249 | 0.824888 | 6.32E-54 | -1.69E-46 |
| MS.gene057598 | MS.gene066249 | 0.807093 | 5.98E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene066249 | 0.816612 | 5.06E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene066249 | 0.809369 | 1.96E-50 | -1.69E-46 |
| MS.gene058829 | MS.gene066249 | 0.82626 | 2.99E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene066249 | 0.813056 | 3.11E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene066249 | 0.819535 | 1.10E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066249.t1 | MTR_6g053640 | 60.185 | 108 | 42 | 1 | 372 | 478 | 18 | 125 | 1.86e-34 | 126 |
| MS.gene066249.t1 | MTR_6g025550 | 47.101 | 138 | 32 | 3 | 151 | 281 | 24 | 127 | 2.51e-31 | 117 |
| MS.gene066249.t1 | MTR_6g024175 | 65.854 | 82 | 27 | 1 | 378 | 458 | 103 | 184 | 1.75e-26 | 106 |
| MS.gene066249.t1 | MTR_4g035820 | 27.273 | 209 | 126 | 3 | 116 | 318 | 234 | 422 | 6.38e-15 | 77.8 |
| MS.gene066249.t1 | MTR_6g022070 | 30.496 | 141 | 97 | 1 | 172 | 311 | 29 | 169 | 7.04e-14 | 73.2 |
| MS.gene066249.t1 | MTR_6g051425 | 33.010 | 103 | 67 | 1 | 74 | 174 | 131 | 233 | 5.84e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066249.t1 | AT4G38180 | 40.127 | 314 | 183 | 5 | 165 | 476 | 397 | 707 | 5.00e-66 | 227 |
| MS.gene066249.t1 | AT4G38180 | 37.255 | 102 | 61 | 2 | 74 | 173 | 186 | 286 | 8.00e-13 | 71.2 |
| MS.gene066249.t1 | AT2G27110 | 34.364 | 291 | 182 | 4 | 177 | 465 | 210 | 493 | 1.12e-52 | 189 |
| MS.gene066249.t1 | AT2G27110 | 34.364 | 291 | 182 | 4 | 177 | 465 | 355 | 638 | 3.05e-52 | 189 |
| MS.gene066249.t1 | AT2G27110 | 34.364 | 291 | 182 | 4 | 177 | 465 | 355 | 638 | 3.05e-52 | 189 |
| MS.gene066249.t1 | AT4G38170 | 33.113 | 302 | 199 | 2 | 161 | 462 | 158 | 456 | 4.46e-52 | 185 |
| MS.gene066249.t1 | AT5G18960 | 42.358 | 229 | 129 | 1 | 175 | 403 | 503 | 728 | 1.65e-51 | 187 |
| MS.gene066249.t1 | AT5G18960 | 42.358 | 229 | 129 | 1 | 175 | 403 | 503 | 728 | 1.65e-51 | 187 |
| MS.gene066249.t1 | AT3G06250 | 40.611 | 229 | 133 | 1 | 175 | 403 | 479 | 704 | 1.47e-49 | 181 |
| MS.gene066249.t1 | AT3G06250 | 40.611 | 229 | 133 | 1 | 175 | 403 | 479 | 704 | 1.47e-49 | 181 |
| MS.gene066249.t1 | AT3G06250 | 40.611 | 229 | 133 | 1 | 175 | 403 | 479 | 704 | 1.47e-49 | 181 |
| MS.gene066249.t1 | AT3G22170 | 31.690 | 284 | 187 | 2 | 177 | 460 | 393 | 669 | 1.36e-47 | 176 |
| MS.gene066249.t1 | AT3G22170 | 31.690 | 284 | 187 | 2 | 177 | 460 | 393 | 669 | 1.36e-47 | 176 |
| MS.gene066249.t1 | AT4G15090 | 33.696 | 276 | 175 | 3 | 181 | 455 | 388 | 656 | 1.01e-46 | 173 |
| MS.gene066249.t1 | AT4G15090 | 33.696 | 276 | 175 | 3 | 181 | 455 | 388 | 656 | 1.01e-46 | 173 |
| MS.gene066249.t1 | AT4G15090 | 33.696 | 276 | 175 | 3 | 181 | 455 | 388 | 656 | 1.01e-46 | 173 |
| MS.gene066249.t1 | AT4G15090 | 33.696 | 276 | 175 | 3 | 181 | 455 | 388 | 656 | 1.01e-46 | 173 |
| MS.gene066249.t1 | AT4G15090 | 33.696 | 276 | 175 | 3 | 181 | 455 | 388 | 656 | 1.01e-46 | 173 |
| MS.gene066249.t1 | AT1G52520 | 29.801 | 302 | 192 | 6 | 178 | 466 | 405 | 699 | 2.64e-39 | 151 |
| MS.gene066249.t1 | AT1G76320 | 31.271 | 291 | 190 | 4 | 171 | 461 | 317 | 597 | 2.48e-38 | 149 |
| MS.gene066249.t1 | AT1G76320 | 31.271 | 291 | 190 | 4 | 171 | 461 | 317 | 597 | 2.52e-38 | 149 |
| MS.gene066249.t1 | AT1G76320 | 31.271 | 291 | 190 | 4 | 171 | 461 | 317 | 597 | 2.52e-38 | 149 |
| MS.gene066249.t1 | AT1G76320 | 31.271 | 291 | 190 | 4 | 171 | 461 | 317 | 597 | 2.91e-38 | 148 |
| MS.gene066249.t1 | AT4G19990 | 30.952 | 294 | 191 | 4 | 184 | 470 | 282 | 570 | 6.67e-35 | 138 |
| MS.gene066249.t1 | AT4G19990 | 30.952 | 294 | 191 | 4 | 184 | 470 | 339 | 627 | 8.77e-35 | 138 |
| MS.gene066249.t1 | AT4G19990 | 30.952 | 294 | 191 | 4 | 184 | 470 | 339 | 627 | 8.87e-35 | 138 |
| MS.gene066249.t1 | AT4G19990 | 30.952 | 294 | 191 | 4 | 184 | 470 | 339 | 627 | 8.87e-35 | 138 |
| MS.gene066249.t1 | AT4G19990 | 30.952 | 294 | 191 | 4 | 184 | 470 | 353 | 641 | 1.02e-34 | 138 |
| MS.gene066249.t1 | AT4G19990 | 30.952 | 294 | 191 | 4 | 184 | 470 | 339 | 627 | 1.13e-34 | 138 |
| MS.gene066249.t1 | AT4G19990 | 30.952 | 294 | 191 | 4 | 184 | 470 | 339 | 627 | 1.13e-34 | 138 |
| MS.gene066249.t1 | AT2G32250 | 31.557 | 244 | 164 | 2 | 165 | 406 | 316 | 558 | 6.87e-34 | 136 |
| MS.gene066249.t1 | AT2G32250 | 31.557 | 244 | 164 | 2 | 165 | 406 | 316 | 558 | 6.87e-34 | 136 |
| MS.gene066249.t1 | AT2G32250 | 31.557 | 244 | 164 | 2 | 165 | 406 | 316 | 558 | 7.22e-34 | 135 |
| MS.gene066249.t1 | AT2G32250 | 31.557 | 244 | 164 | 2 | 165 | 406 | 316 | 558 | 7.22e-34 | 135 |
| MS.gene066249.t1 | AT2G32250 | 31.557 | 244 | 164 | 2 | 165 | 406 | 316 | 558 | 7.22e-34 | 135 |
| MS.gene066249.t1 | AT2G32250 | 31.557 | 244 | 164 | 2 | 165 | 406 | 316 | 558 | 8.69e-34 | 135 |
| MS.gene066249.t1 | AT2G32250 | 31.557 | 244 | 164 | 2 | 165 | 406 | 275 | 517 | 9.49e-34 | 135 |
| MS.gene066249.t1 | AT2G32250 | 31.557 | 244 | 164 | 2 | 165 | 406 | 275 | 517 | 9.53e-34 | 135 |
| MS.gene066249.t1 | AT1G80010 | 27.243 | 301 | 206 | 5 | 173 | 465 | 425 | 720 | 1.85e-32 | 131 |
| MS.gene066249.t1 | AT5G28530 | 25.177 | 282 | 204 | 3 | 176 | 457 | 401 | 675 | 9.19e-27 | 114 |
| MS.gene066249.t1 | AT5G28530 | 25.532 | 282 | 203 | 4 | 176 | 457 | 338 | 612 | 1.02e-26 | 114 |
| MS.gene066249.t1 | AT1G10240 | 29.646 | 226 | 153 | 2 | 175 | 400 | 385 | 604 | 2.13e-26 | 113 |
| MS.gene066249.t1 | AT1G10240 | 29.646 | 226 | 153 | 2 | 175 | 400 | 385 | 604 | 2.13e-26 | 113 |
| MS.gene066249.t1 | AT5G28530 | 24.468 | 282 | 202 | 3 | 176 | 457 | 401 | 671 | 1.12e-25 | 111 |
| MS.gene066249.t1 | AT5G28530 | 24.468 | 282 | 202 | 3 | 176 | 457 | 401 | 671 | 1.12e-25 | 111 |
| MS.gene066249.t1 | AT5G28530 | 24.823 | 282 | 201 | 4 | 176 | 457 | 338 | 608 | 1.13e-25 | 110 |
Find 56 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGGCGGTATTGATAATTT+TGG | 0.195979 | 1.1:-71549471 | MS.gene066249:CDS |
| GAAAATTAACTAATTGCTTT+TGG | 0.203998 | 1.1:-71549299 | MS.gene066249:CDS |
| CATTCCTTCAATGGGCTCTA+AGG | 0.236305 | 1.1:+71549911 | None:intergenic |
| TGAAAAGTCACATGATATTT+AGG | 0.266210 | 1.1:+71548397 | None:intergenic |
| AATTGTCAGTTGAAGAATAC+TGG | 0.271394 | 1.1:-71549354 | MS.gene066249:CDS |
| AACTGTGTTCCTAAAGAAAA+AGG | 0.312218 | 1.1:-71548302 | MS.gene066249:CDS |
| AATCGTTTGGTATTCTTTGT+AGG | 0.315386 | 1.1:-71548333 | MS.gene066249:CDS |
| TATACTCAATTCGATCAAAA+TGG | 0.317025 | 1.1:-71548789 | MS.gene066249:CDS |
| TTCATTGTTTAATAGTGTTA+TGG | 0.327096 | 1.1:-71548164 | MS.gene066249:CDS |
| ATTCTTCAATTGTGATAGAT+TGG | 0.351090 | 1.1:+71548878 | None:intergenic |
| ACTGATGTGCTTGATGAATC+TGG | 0.354525 | 1.1:-71549528 | MS.gene066249:CDS |
| TGTCAAAAGTTTGAATCGTT+TGG | 0.358658 | 1.1:-71548346 | MS.gene066249:CDS |
| AATAATTGATAACATCTTGT+TGG | 0.360169 | 1.1:+71549442 | None:intergenic |
| TTTAAACTCCATTCCTTCAA+TGG | 0.364249 | 1.1:+71549902 | None:intergenic |
| TAGTGTTATGGTTCGTTCAC+TGG | 0.382958 | 1.1:-71548152 | MS.gene066249:CDS |
| ATTCCTTCAATGGGCTCTAA+GGG | 0.384475 | 1.1:+71549912 | None:intergenic |
| TTGAAGAATTTGAGTCTGAA+TGG | 0.400537 | 1.1:-71548864 | MS.gene066249:CDS |
| TTAAACTCCATTCCTTCAAT+GGG | 0.435121 | 1.1:+71549903 | None:intergenic |
| GTGCTTGATGAATCTGGTTT+AGG | 0.447135 | 1.1:-71549522 | MS.gene066249:CDS |
| TTGACAATTGAAGAATTTGA+AGG | 0.456352 | 1.1:-71548208 | MS.gene066249:CDS |
| TGAAGAATTTGAGTCTGAAT+GGG | 0.463681 | 1.1:-71548863 | MS.gene066249:CDS |
| TCCTTCAATGGGCTCTAAGG+GGG | 0.466966 | 1.1:+71549914 | None:intergenic |
| CTGGAATGTCTACCACTCAT+AGG | 0.472850 | 1.1:-71548735 | MS.gene066249:CDS |
| TTTGAAGCTTCTTCTTCCAT+GGG | 0.477189 | 1.1:+71548550 | None:intergenic |
| GAAGCAATGATTGATAAATA+CGG | 0.502447 | 1.1:-71548841 | MS.gene066249:CDS |
| AAATTATGATGTACATATGC+AGG | 0.504291 | 1.1:+71548763 | None:intergenic |
| GGGTATAAAGTTCGCAAAAG+TGG | 0.509142 | 1.1:+71548571 | None:intergenic |
| CCTTCAATGGGCTCTAAGGG+GGG | 0.511902 | 1.1:+71549915 | None:intergenic |
| AAGCAATGATTGATAAATAC+GGG | 0.513517 | 1.1:-71548840 | MS.gene066249:CDS |
| CACAGTATGTTCTACAACGA+TGG | 0.518628 | 1.1:-71548264 | MS.gene066249:CDS |
| TGTGTCAGAAACTTGCTCAA+TGG | 0.523310 | 1.1:+71548664 | None:intergenic |
| CTTAGAGCCCATTGAAGGAA+TGG | 0.526994 | 1.1:-71549910 | MS.gene066249:CDS |
| ACAATTGAAGAATTTGAAGG+AGG | 0.530417 | 1.1:-71548205 | MS.gene066249:CDS |
| TGAGATATTTCAAGATGAGT+TGG | 0.531340 | 1.1:-71548506 | MS.gene066249:CDS |
| AGGTCATGAGATGACAGATA+TGG | 0.541561 | 1.1:-71550024 | MS.gene066249:CDS |
| GATGGTGGTTCACTATTGAG+AGG | 0.542446 | 1.1:+71549942 | None:intergenic |
| ATATTTCAAGATGAGTTGGT+TGG | 0.542621 | 1.1:-71548502 | MS.gene066249:CDS |
| ATTGTCAGTTGAAGAATACT+GGG | 0.543680 | 1.1:-71549353 | MS.gene066249:CDS |
| TGCACGTTACAACGAGGAAA+GGG | 0.548977 | 1.1:-71548623 | MS.gene066249:CDS |
| CGAGAAAATGAAAGACGATT+CGG | 0.551598 | 1.1:-71551491 | None:intergenic |
| TCTGTCTTATGCACTGAAAG+TGG | 0.562246 | 1.1:-71549489 | MS.gene066249:CDS |
| TTCCTTCAATGGGCTCTAAG+GGG | 0.577393 | 1.1:+71549913 | None:intergenic |
| TTTGCGAACTTTATACCCCA+TGG | 0.583317 | 1.1:-71548566 | MS.gene066249:CDS |
| ATGCACGTTACAACGAGGAA+AGG | 0.585794 | 1.1:-71548624 | MS.gene066249:CDS |
| CGTTGTAGAACATACTGTGA+AGG | 0.588365 | 1.1:+71548268 | None:intergenic |
| CATGAGATGACAGATATGGA+TGG | 0.601625 | 1.1:-71550020 | MS.gene066249:CDS |
| TTGAAGCTTCTTCTTCCATG+GGG | 0.606500 | 1.1:+71548551 | None:intergenic |
| GTTGTAGAACATACTGTGAA+GGG | 0.621697 | 1.1:+71548269 | None:intergenic |
| GCGTTTCAAATGGATGCCGA+AGG | 0.622605 | 1.1:-71549321 | MS.gene066249:CDS |
| AGAGCTTGAAGAATCAAATG+AGG | 0.626048 | 1.1:-71548041 | MS.gene066249:CDS |
| CATACTTTCACTCCTATGAG+TGG | 0.639566 | 1.1:+71548723 | None:intergenic |
| ACGGGTTGCAAGATAATCAG+TGG | 0.648204 | 1.1:-71548822 | MS.gene066249:CDS |
| AAGCAAAGAGTTACTACACA+AGG | 0.651539 | 1.1:-71549869 | MS.gene066249:intron |
| GTCTTATGCACTGAAAGTGG+CGG | 0.656902 | 1.1:-71549486 | MS.gene066249:CDS |
| TGTATCATTTGAGACAACCA+TGG | 0.701765 | 1.1:+71549989 | None:intergenic |
| TCTTGATGCACGTTACAACG+AGG | 0.755842 | 1.1:-71548629 | MS.gene066249:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGAAAAATAATGATATA+TGG | - | chr1.1:71549846-71549865 | MS.gene066249:intron | 10.0% |
| !! | AAATCATAACCATTATATTT+AGG | + | chr1.1:71549009-71549028 | None:intergenic | 15.0% |
| !! | AATCATAACCATTATATTTA+GGG | + | chr1.1:71549008-71549027 | None:intergenic | 15.0% |
| !! | ATATAATGGTTATGATTTAT+TGG | - | chr1.1:71549011-71549030 | MS.gene066249:intron | 15.0% |
| !! | TATAATGGTTATGATTTATT+GGG | - | chr1.1:71549012-71549031 | MS.gene066249:intron | 15.0% |
| !!! | AAAAAAAAATCTTTTTCACT+TGG | - | chr1.1:71548769-71548788 | MS.gene066249:CDS | 15.0% |
| !!! | AAAATTAACTAATTGCTTTT+GGG | - | chr1.1:71550204-71550223 | MS.gene066249:intron | 15.0% |
| !!! | AAGTATGAATAAGTTTTTTA+AGG | - | chr1.1:71550795-71550814 | MS.gene066249:intron | 15.0% |
| !!! | TATTTATTTTTCAAGTATGT+TGG | + | chr1.1:71550286-71550305 | None:intergenic | 15.0% |
| !! | AATAAAACACACCAAATTTA+CGG | + | chr1.1:71549127-71549146 | None:intergenic | 20.0% |
| !! | AGAAACTTGAAAAAAAAAAG+GGG | + | chr1.1:71548087-71548106 | None:intergenic | 20.0% |
| !! | ATCATAACCATTATATTTAG+GGG | + | chr1.1:71549007-71549026 | None:intergenic | 20.0% |
| !! | CAGAAACTTGAAAAAAAAAA+GGG | + | chr1.1:71548088-71548107 | None:intergenic | 20.0% |
| !! | CTAATTATTATTTGTTCTCT+AGG | - | chr1.1:71549055-71549074 | MS.gene066249:intron | 20.0% |
| !! | TATTCAAATAATAATAGCCA+TGG | - | chr1.1:71548225-71548244 | MS.gene066249:CDS | 20.0% |
| !! | TGTAACTAATAACGATAAAA+TGG | + | chr1.1:71549215-71549234 | None:intergenic | 20.0% |
| !! | TTCATTGTTTAATAGTGTTA+TGG | - | chr1.1:71551338-71551357 | MS.gene066249:intron | 20.0% |
| !! | TTGTTGAATATTGTTCTTAT+CGG | - | chr1.1:71548164-71548183 | MS.gene066249:CDS | 20.0% |
| !!! | AATAATTGATAACATCTTGT+TGG | + | chr1.1:71550063-71550082 | None:intergenic | 20.0% |
| !!! | ATGTATTTTCGATGAATTAT+TGG | - | chr1.1:71548392-71548411 | MS.gene066249:CDS | 20.0% |
| !!! | ATTATTGGGATTTAATTTTG+TGG | - | chr1.1:71548407-71548426 | MS.gene066249:CDS | 20.0% |
| !!! | ATTTTTCTTTCTTAGCATTT+CGG | + | chr1.1:71551266-71551285 | None:intergenic | 20.0% |
| !!! | GAAAATTAACTAATTGCTTT+TGG | - | chr1.1:71550203-71550222 | MS.gene066249:intron | 20.0% |
| !!! | TGTATTTTCGATGAATTATT+GGG | - | chr1.1:71548393-71548412 | MS.gene066249:CDS | 20.0% |
| !!! | TTATTGGGATTTAATTTTGT+GGG | - | chr1.1:71548408-71548427 | MS.gene066249:CDS | 20.0% |
| ! | AAATCAATCTGAATAAGTAG+TGG | - | chr1.1:71549327-71549346 | MS.gene066249:CDS | 25.0% |
| ! | AAATTATGATGTACATATGC+AGG | + | chr1.1:71550742-71550761 | None:intergenic | 25.0% |
| ! | AAGCAATGATTGATAAATAC+GGG | - | chr1.1:71550662-71550681 | MS.gene066249:intron | 25.0% |
| ! | AATAACGATAAAATGGTTTC+AGG | + | chr1.1:71549208-71549227 | None:intergenic | 25.0% |
| ! | ATAAAACACACCAAATTTAC+GGG | + | chr1.1:71549126-71549145 | None:intergenic | 25.0% |
| ! | ATTCTTCAATTGTGATAGAT+TGG | + | chr1.1:71550627-71550646 | None:intergenic | 25.0% |
| ! | CCAGAAACTTGAAAAAAAAA+AGG | + | chr1.1:71548089-71548108 | None:intergenic | 25.0% |
| ! | GAAGCAATGATTGATAAATA+CGG | - | chr1.1:71550661-71550680 | MS.gene066249:intron | 25.0% |
| ! | GAAGCTTCAAAAATTTATAC+AGG | - | chr1.1:71550964-71550983 | MS.gene066249:intron | 25.0% |
| ! | GCTAAGAAAGAAAAATTTGA+AGG | - | chr1.1:71551270-71551289 | MS.gene066249:intron | 25.0% |
| ! | TAAACATGCTATTAGAAAAG+AGG | + | chr1.1:71549427-71549446 | None:intergenic | 25.0% |
| ! | TATACTCAATTCGATCAAAA+TGG | - | chr1.1:71550713-71550732 | MS.gene066249:intron | 25.0% |
| ! | TGAAAAGTCACATGATATTT+AGG | + | chr1.1:71551108-71551127 | None:intergenic | 25.0% |
| ! | TTGACAATTGAAGAATTTGA+AGG | - | chr1.1:71551294-71551313 | MS.gene066249:intron | 25.0% |
| !! | ACATGATGAACTTTTCTTTA+TGG | - | chr1.1:71549241-71549260 | MS.gene066249:intron | 25.0% |
| !! | AGAGTTGCTTACAAATATTT+TGG | - | chr1.1:71550241-71550260 | MS.gene066249:intron | 25.0% |
| !! | CATCAACAATCAATTCTTTT+TGG | - | chr1.1:71550343-71550362 | MS.gene066249:intron | 25.0% |
| !! | GCAATTAGTTAATTTTCCTT+CGG | + | chr1.1:71550200-71550219 | None:intergenic | 25.0% |
| !! | GTTTTCTTATCTCATACATT+TGG | - | chr1.1:71548907-71548926 | MS.gene066249:CDS | 25.0% |
| !! | TTGTTTTCCCCTAAATATAA+TGG | - | chr1.1:71548997-71549016 | MS.gene066249:intron | 25.0% |
| !! | TTTTTCTTTCTTAGCATTTC+GGG | + | chr1.1:71551265-71551284 | None:intergenic | 25.0% |
| !!! | AGAAAATTCAACTTTTTCTG+TGG | + | chr1.1:71551040-71551059 | None:intergenic | 25.0% |
| !!! | ATTTGGTTTGTGTTTTTCTT+TGG | - | chr1.1:71548924-71548943 | MS.gene066249:intron | 25.0% |
| !!! | CCTTTTTTTTTTCAAGTTTC+TGG | - | chr1.1:71548086-71548105 | MS.gene066249:CDS | 25.0% |
| !!! | TTACAAATATTTTGGTGATG+TGG | - | chr1.1:71550249-71550268 | MS.gene066249:intron | 25.0% |
| AAATAGTGAACACATTTCCA+TGG | + | chr1.1:71548245-71548264 | None:intergenic | 30.0% | |
| AACTGTGTTCCTAAAGAAAA+AGG | - | chr1.1:71551200-71551219 | MS.gene066249:intron | 30.0% | |
| AATCGTTTGGTATTCTTTGT+AGG | - | chr1.1:71551169-71551188 | MS.gene066249:intron | 30.0% | |
| AATTGTCAGTTGAAGAATAC+TGG | - | chr1.1:71550148-71550167 | MS.gene066249:intron | 30.0% | |
| ACAATTGAAGAATTTGAAGG+AGG | - | chr1.1:71551297-71551316 | MS.gene066249:intron | 30.0% | |
| ACTTCAGAACAAATACAGTA+TGG | - | chr1.1:71549278-71549297 | MS.gene066249:intron | 30.0% | |
| AGAACAAACGGTATGATAAT+TGG | - | chr1.1:71549707-71549726 | MS.gene066249:intron | 30.0% | |
| ATTAATGAACAGAAGATCGT+TGG | + | chr1.1:71548506-71548525 | None:intergenic | 30.0% | |
| ATTGTCAGTTGAAGAATACT+GGG | - | chr1.1:71550149-71550168 | MS.gene066249:intron | 30.0% | |
| CAATAATGGTGATTAACCTT+TGG | + | chr1.1:71550511-71550530 | None:intergenic | 30.0% | |
| CAATACTGTTTGCGTTATTA+TGG | - | chr1.1:71549454-71549473 | MS.gene066249:CDS | 30.0% | |
| CTTCAGAACAAATACAGTAT+GGG | - | chr1.1:71549279-71549298 | MS.gene066249:intron | 30.0% | |
| GTTACTAAGTCAAGAACAAA+CGG | - | chr1.1:71549695-71549714 | MS.gene066249:intron | 30.0% | |
| TATGGCAACAACAACATAAA+TGG | - | chr1.1:71548629-71548648 | MS.gene066249:CDS | 30.0% | |
| TATTACACATGATGAAACCA+GGG | - | chr1.1:71549799-71549818 | MS.gene066249:intron | 30.0% | |
| TCAAGAAATTCTTTGTTCCA+AGG | - | chr1.1:71549730-71549749 | MS.gene066249:intron | 30.0% | |
| TGAAGAATTTGAGTCTGAAT+GGG | - | chr1.1:71550639-71550658 | MS.gene066249:intron | 30.0% | |
| TGAGATATTTCAAGATGAGT+TGG | - | chr1.1:71550996-71551015 | MS.gene066249:intron | 30.0% | |
| TGATGATTAACTCCAGTAAT+TGG | + | chr1.1:71550325-71550344 | None:intergenic | 30.0% | |
| TGTCAAAAGTTTGAATCGTT+TGG | - | chr1.1:71551156-71551175 | MS.gene066249:intron | 30.0% | |
| TTAAACTCCATTCCTTCAAT+GGG | + | chr1.1:71549602-71549621 | None:intergenic | 30.0% | |
| TTAATCACCATTATTGCATG+TGG | - | chr1.1:71550515-71550534 | MS.gene066249:intron | 30.0% | |
| TTATTACACATGATGAAACC+AGG | - | chr1.1:71549798-71549817 | MS.gene066249:intron | 30.0% | |
| TTGAAGAATTTGAGTCTGAA+TGG | - | chr1.1:71550638-71550657 | MS.gene066249:intron | 30.0% | |
| TTGTTCTTGACTTAGTAACA+CGG | + | chr1.1:71549694-71549713 | None:intergenic | 30.0% | |
| TTTAAACTCCATTCCTTCAA+TGG | + | chr1.1:71549603-71549622 | None:intergenic | 30.0% | |
| ! | AGTTGAATTTTCTGATGAAG+TGG | - | chr1.1:71551047-71551066 | MS.gene066249:intron | 30.0% |
| ! | GATAACGTACCTTTTTCTTT+AGG | + | chr1.1:71551212-71551231 | None:intergenic | 30.0% |
| ! | GGAGAAATTTGAAACTTACA+AGG | + | chr1.1:71548048-71548067 | None:intergenic | 30.0% |
| ! | GTACATCATAATTTTTGTGC+TGG | - | chr1.1:71550748-71550767 | MS.gene066249:intron | 30.0% |
| ! | GTTTTTCTATGCGTTTCAAA+TGG | - | chr1.1:71550171-71550190 | MS.gene066249:intron | 30.0% |
| ! | TGGTCTGTGATAATAGTTTT+AGG | + | chr1.1:71550451-71550470 | None:intergenic | 30.0% |
| !! | AATTTTCTGAAAGAGCTTCA+TGG | - | chr1.1:71551373-71551392 | MS.gene066249:intron | 30.0% |
| !! | ATATTTCAAGATGAGTTGGT+TGG | - | chr1.1:71551000-71551019 | MS.gene066249:intron | 30.0% |
| !! | GGTCTGTGATAATAGTTTTA+GGG | + | chr1.1:71550450-71550469 | None:intergenic | 30.0% |
| !! | GTTTTTCTTTGGAGATAATC+TGG | - | chr1.1:71548935-71548954 | MS.gene066249:intron | 30.0% |
| !! | TCCTTGTTTCACATACTTTT+TGG | + | chr1.1:71549768-71549787 | None:intergenic | 30.0% |
| !!! | AAACTGTAGAGAGTTTTGTT+TGG | - | chr1.1:71550386-71550405 | MS.gene066249:intron | 30.0% |
| !!! | TGTCTCAAGTTTTGTTATCA+GGG | - | chr1.1:71548826-71548845 | MS.gene066249:CDS | 30.0% |
| !!! | TTGTCTCAAGTTTTGTTATC+AGG | - | chr1.1:71548825-71548844 | MS.gene066249:CDS | 30.0% |
| AAATTCTTTGTTCCAAGGAG+GGG | - | chr1.1:71549735-71549754 | MS.gene066249:intron | 35.0% | |
| AAGCAAAGAGTTACTACACA+AGG | - | chr1.1:71549633-71549652 | MS.gene066249:intron | 35.0% | |
| ACTCCAGTAATTGGAACAAA+AGG | + | chr1.1:71550316-71550335 | None:intergenic | 35.0% | |
| ACTTGGTTAGAAGCAATGAA+TGG | - | chr1.1:71550418-71550437 | MS.gene066249:intron | 35.0% | |
| AGAAATTCTTTGTTCCAAGG+AGG | - | chr1.1:71549733-71549752 | MS.gene066249:intron | 35.0% | |
| AGAGCTTGAAGAATCAAATG+AGG | - | chr1.1:71551461-71551480 | MS.gene066249:intron | 35.0% | |
| CAACGATATACTGGTAGTTA+TGG | - | chr1.1:71548658-71548677 | MS.gene066249:CDS | 35.0% | |
| CAATATGCCACATGCAATAA+TGG | + | chr1.1:71550525-71550544 | None:intergenic | 35.0% | |
| CTCTGATAAAGCCAGAAAAA+TGG | + | chr1.1:71549401-71549420 | None:intergenic | 35.0% | |
| CTTGGTTAGAAGCAATGAAT+GGG | - | chr1.1:71550419-71550438 | MS.gene066249:intron | 35.0% | |
| GAAATTCTTTGTTCCAAGGA+GGG | - | chr1.1:71549734-71549753 | MS.gene066249:intron | 35.0% | |
| GTCTACTGCAAAACCTTTAA+GGG | + | chr1.1:71548119-71548138 | None:intergenic | 35.0% | |
| GTTGTAGAACATACTGTGAA+GGG | + | chr1.1:71551236-71551255 | None:intergenic | 35.0% | |
| TCTACTGCAAAACCTTTAAG+GGG | + | chr1.1:71548118-71548137 | None:intergenic | 35.0% | |
| TGTCTACTGCAAAACCTTTA+AGG | + | chr1.1:71548120-71548139 | None:intergenic | 35.0% | |
| TTATTGCATGTGGCATATTG+AGG | - | chr1.1:71550525-71550544 | MS.gene066249:intron | 35.0% | |
| TTGGTTAGAAGCAATGAATG+GGG | - | chr1.1:71550420-71550439 | MS.gene066249:intron | 35.0% | |
| TTGTTTGGTTGCTAAGTACT+TGG | - | chr1.1:71550401-71550420 | MS.gene066249:intron | 35.0% | |
| ! | ACTCCTTTTGTTCCAATTAC+TGG | - | chr1.1:71550310-71550329 | MS.gene066249:intron | 35.0% |
| ! | ATAATGTGGCTCATGTTTTG+TGG | - | chr1.1:71548726-71548745 | MS.gene066249:CDS | 35.0% |
| ! | GCCAAAAAGTATGTGAAACA+AGG | - | chr1.1:71549764-71549783 | MS.gene066249:intron | 35.0% |
| ! | TAATGTGGCTCATGTTTTGT+GGG | - | chr1.1:71548727-71548746 | MS.gene066249:CDS | 35.0% |
| ! | TATGGATGGAGATTTTACCA+TGG | - | chr1.1:71549496-71549515 | MS.gene066249:CDS | 35.0% |
| ! | TGTATCATTTGAGACAACCA+TGG | + | chr1.1:71549516-71549535 | None:intergenic | 35.0% |
| ! | TTTGAAGCTTCTTCTTCCAT+GGG | + | chr1.1:71550955-71550974 | None:intergenic | 35.0% |
| ! | TTTTCGTCATCCCGTAAATT+TGG | - | chr1.1:71549113-71549132 | MS.gene066249:intron | 35.0% |
| !! | CTCATGTTTTGTGGGTTATT+GGG | - | chr1.1:71548735-71548754 | MS.gene066249:CDS | 35.0% |
| !! | TCTTTTGATGCTTGTTGCTA+TGG | - | chr1.1:71548611-71548630 | MS.gene066249:CDS | 35.0% |
| !!! | AAAGGTTTTAGTTTCCGCAT+GGG | - | chr1.1:71549668-71549687 | MS.gene066249:intron | 35.0% |
| !!! | AGTGGCGGTATTGATAATTT+TGG | - | chr1.1:71550031-71550050 | MS.gene066249:intron | 35.0% |
| !!! | ATTGCTTTTGGGTTGATTCA+AGG | - | chr1.1:71550215-71550234 | MS.gene066249:intron | 35.0% |
| !!! | TTTTGAAGCTTCTTCTTCCA+TGG | + | chr1.1:71550956-71550975 | None:intergenic | 35.0% |
| ACGAATAGTGACAGTTGTTG+TGG | - | chr1.1:71548542-71548561 | MS.gene066249:CDS | 40.0% | |
| ACTGATGTGCTTGATGAATC+TGG | - | chr1.1:71549974-71549993 | MS.gene066249:CDS | 40.0% | |
| ACTGTTTGCGTTATTATGGC+AGG | - | chr1.1:71549458-71549477 | MS.gene066249:CDS | 40.0% | |
| AGATAATCTGGTCAAAGTCG+TGG | - | chr1.1:71548947-71548966 | MS.gene066249:intron | 40.0% | |
| AGCAGTCTGAGAGTTTGAAA+TGG | - | chr1.1:71548875-71548894 | MS.gene066249:CDS | 40.0% | |
| AGGGGTAGAATGAAGAAAAG+AGG | + | chr1.1:71548069-71548088 | None:intergenic | 40.0% | |
| AGGTCATGAGATGACAGATA+TGG | - | chr1.1:71549478-71549497 | MS.gene066249:CDS | 40.0% | |
| AGTTATGGAGATGTTGCAGT+AGG | - | chr1.1:71548673-71548692 | MS.gene066249:CDS | 40.0% | |
| CACAGTATGTTCTACAACGA+TGG | - | chr1.1:71551238-71551257 | MS.gene066249:intron | 40.0% | |
| CACATGAATCAGATCTATCG+TGG | - | chr1.1:71550562-71550581 | MS.gene066249:intron | 40.0% | |
| CAGAAAAATGGAGATTGCAC+TGG | + | chr1.1:71549389-71549408 | None:intergenic | 40.0% | |
| CATACTTTCACTCCTATGAG+TGG | + | chr1.1:71550782-71550801 | None:intergenic | 40.0% | |
| CATGAGATGACAGATATGGA+TGG | - | chr1.1:71549482-71549501 | MS.gene066249:CDS | 40.0% | |
| CCTTAATTTCTGTCGTGTCA+AGG | - | chr1.1:71548465-71548484 | MS.gene066249:CDS | 40.0% | |
| CCTTGACACGACAGAAATTA+AGG | + | chr1.1:71548468-71548487 | None:intergenic | 40.0% | |
| CGAATAGTGACAGTTGTTGT+GGG | - | chr1.1:71548543-71548562 | MS.gene066249:CDS | 40.0% | |
| CGTTGTAGAACATACTGTGA+AGG | + | chr1.1:71551237-71551256 | None:intergenic | 40.0% | |
| GAAGTAGAACAGAGCAACAT+AGG | - | chr1.1:71548290-71548309 | MS.gene066249:CDS | 40.0% | |
| GAGAAAACAGCTGGTGATTA+TGG | + | chr1.1:71549895-71549914 | None:intergenic | 40.0% | |
| GAGTTGTTTAAGCAGTTCTC+TGG | + | chr1.1:71548372-71548391 | None:intergenic | 40.0% | |
| GGGTATAAAGTTCGCAAAAG+TGG | + | chr1.1:71550934-71550953 | None:intergenic | 40.0% | |
| GTTATGGAGATGTTGCAGTA+GGG | - | chr1.1:71548674-71548693 | MS.gene066249:CDS | 40.0% | |
| TAGATCTGATTCATGTGCTC+TGG | + | chr1.1:71550559-71550578 | None:intergenic | 40.0% | |
| TAGTGTTATGGTTCGTTCAC+TGG | - | chr1.1:71551350-71551369 | MS.gene066249:intron | 40.0% | |
| TATCACCAATGCAGTTGCAA+GGG | - | chr1.1:71550480-71550499 | MS.gene066249:intron | 40.0% | |
| TCTGTCTTATGCACTGAAAG+TGG | - | chr1.1:71550013-71550032 | MS.gene066249:CDS | 40.0% | |
| TTGAAGCTTCTTCTTCCATG+GGG | + | chr1.1:71550954-71550973 | None:intergenic | 40.0% | |
| TTTGCGAACTTTATACCCCA+TGG | - | chr1.1:71550936-71550955 | MS.gene066249:intron | 40.0% | |
| ! | ATTCCTTCAATGGGCTCTAA+GGG | + | chr1.1:71549593-71549612 | None:intergenic | 40.0% |
| ! | GTGCTTGATGAATCTGGTTT+AGG | - | chr1.1:71549980-71549999 | MS.gene066249:CDS | 40.0% |
| ! | TGTGTCAGAAACTTGCTCAA+TGG | + | chr1.1:71550841-71550860 | None:intergenic | 40.0% |
| ! | TTCTGGTTGTTTCCCCTTAA+AGG | - | chr1.1:71548103-71548122 | MS.gene066249:CDS | 40.0% |
| !! | CAGTGCAATCTCCATTTTTC+TGG | - | chr1.1:71549387-71549406 | MS.gene066249:CDS | 40.0% |
| !! | GCTCATGTTTTGTGGGTTAT+TGG | - | chr1.1:71548734-71548753 | MS.gene066249:CDS | 40.0% |
| !! | TTTTGGTTGTGCTCTCTTGT+GGG | - | chr1.1:71550360-71550379 | MS.gene066249:intron | 40.0% |
| !!! | CAAAGGTTTTAGTTTCCGCA+TGG | - | chr1.1:71549667-71549686 | MS.gene066249:intron | 40.0% |
| !!! | TTTTTGGTTGTGCTCTCTTG+TGG | - | chr1.1:71550359-71550378 | MS.gene066249:intron | 40.0% |
| AAACACCCTTGCAACTGCAT+TGG | + | chr1.1:71550488-71550507 | None:intergenic | 45.0% | |
| ACAAGGTACGCTCAGAACAA+AGG | - | chr1.1:71549650-71549669 | MS.gene066249:intron | 45.0% | |
| ACACATGATGAAACCAGGGT+GGG | - | chr1.1:71549803-71549822 | MS.gene066249:intron | 45.0% | |
| ACACCTCCTTAGCTTAGAAG+CGG | + | chr1.1:71548974-71548993 | None:intergenic | 45.0% | |
| AGTAGGGATTCTCGTTGTTG+AGG | - | chr1.1:71548690-71548709 | MS.gene066249:CDS | 45.0% | |
| ATGCACGTTACAACGAGGAA+AGG | - | chr1.1:71550878-71550897 | MS.gene066249:intron | 45.0% | |
| CAATGACACACCAGTAATGC+AGG | - | chr1.1:71548337-71548356 | MS.gene066249:CDS | 45.0% | |
| CAGAGCAACATAGGCACAAA+TGG | - | chr1.1:71548299-71548318 | MS.gene066249:CDS | 45.0% | |
| CTATCACCAATGCAGTTGCA+AGG | - | chr1.1:71550479-71550498 | MS.gene066249:intron | 45.0% | |
| CTGGAATGTCTACCACTCAT+AGG | - | chr1.1:71550767-71550786 | MS.gene066249:intron | 45.0% | |
| CTTAGAGCCCATTGAAGGAA+TGG | - | chr1.1:71549592-71549611 | MS.gene066249:intron | 45.0% | |
| GAGCCACATTATTCTGCAAG+CGG | + | chr1.1:71548718-71548737 | None:intergenic | 45.0% | |
| GATCCGCTTGCAGAATAATG+TGG | - | chr1.1:71548712-71548731 | MS.gene066249:CDS | 45.0% | |
| GTCTTATGCACTGAAAGTGG+CGG | - | chr1.1:71550016-71550035 | MS.gene066249:CDS | 45.0% | |
| GTGTACAATGCCTGCATTAC+TGG | + | chr1.1:71548350-71548369 | None:intergenic | 45.0% | |
| TACACATGATGAAACCAGGG+TGG | - | chr1.1:71549802-71549821 | MS.gene066249:intron | 45.0% | |
| TCTTGATGCACGTTACAACG+AGG | - | chr1.1:71550873-71550892 | MS.gene066249:intron | 45.0% | |
| TGCACGTTACAACGAGGAAA+GGG | - | chr1.1:71550879-71550898 | MS.gene066249:intron | 45.0% | |
| TGGCTGTAGCAACGATATAC+TGG | - | chr1.1:71548649-71548668 | MS.gene066249:CDS | 45.0% | |
| TTGTTGTGGGCATGATCATG+AGG | - | chr1.1:71548556-71548575 | MS.gene066249:CDS | 45.0% | |
| ! | ACGGGTTGCAAGATAATCAG+TGG | - | chr1.1:71550680-71550699 | MS.gene066249:intron | 45.0% |
| ! | CACTTCTAGGAGAAAACAGC+TGG | + | chr1.1:71549904-71549923 | None:intergenic | 45.0% |
| ! | CATTCCTTCAATGGGCTCTA+AGG | + | chr1.1:71549594-71549613 | None:intergenic | 45.0% |
| ! | CATTGGTGATAGCAGTGTGT+TGG | + | chr1.1:71550471-71550490 | None:intergenic | 45.0% |
| ! | GATGGTGGTTCACTATTGAG+AGG | + | chr1.1:71549563-71549582 | None:intergenic | 45.0% |
| !! | AGTTGCAAGGGTGTTTCCAA+AGG | - | chr1.1:71550492-71550511 | MS.gene066249:intron | 45.0% |
| !! | TTCCTTCAATGGGCTCTAAG+GGG | + | chr1.1:71549592-71549611 | None:intergenic | 45.0% |
| !! | ATTATTATTTGAATAAATTA+GGG | + | chr1.1:71548220-71548239 | None:intergenic | 5.0% |
| !! | TATTATTATTTGAATAAATT+AGG | + | chr1.1:71548221-71548240 | None:intergenic | 5.0% |
| ACTTAGTAACACGGCCCATG+CGG | + | chr1.1:71549685-71549704 | None:intergenic | 50.0% | |
| CGAAGAGACTGTGCACTTCT+AGG | + | chr1.1:71549917-71549936 | None:intergenic | 50.0% | |
| GCGTTTCAAATGGATGCCGA+AGG | - | chr1.1:71550181-71550200 | MS.gene066249:intron | 50.0% | |
| !! | TCCTTCAATGGGCTCTAAGG+GGG | + | chr1.1:71549591-71549610 | None:intergenic | 50.0% |
| CGTGGACCGCTTCTAAGCTA+AGG | - | chr1.1:71548965-71548984 | MS.gene066249:intron | 55.0% | |
| GGACCGCTTCTAAGCTAAGG+AGG | - | chr1.1:71548968-71548987 | MS.gene066249:intron | 55.0% | |
| TGAAACCAGGGTGGGATGCA+AGG | - | chr1.1:71549811-71549830 | MS.gene066249:intron | 55.0% | |
| ! | TTTGGCTCGAAACCCCTCCT+TGG | + | chr1.1:71549750-71549769 | None:intergenic | 55.0% |
| !! | CCTTCAATGGGCTCTAAGGG+GGG | + | chr1.1:71549590-71549609 | None:intergenic | 55.0% |
| CCCCCCTTAGAGCCCATTGA+AGG | - | chr1.1:71549587-71549606 | MS.gene066249:intron | 60.0% | |
| ! | TCTAAGGGGGGCTCTGATGG+TGG | + | chr1.1:71549578-71549597 | None:intergenic | 60.0% |
| CCAGGGTGGGATGCAAGGCA+CGG | - | chr1.1:71549816-71549835 | MS.gene066249:intron | 65.0% | |
| !! | GGCTCTAAGGGGGGCTCTGA+TGG | + | chr1.1:71549581-71549600 | None:intergenic | 65.0% |
| CCGTGCCTTGCATCCCACCC+TGG | + | chr1.1:71549819-71549838 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 71548018 | 71551506 | 71548018 | ID=MS.gene066249 |
| chr1.1 | mRNA | 71548018 | 71551506 | 71548018 | ID=MS.gene066249.t1;Parent=MS.gene066249 |
| chr1.1 | exon | 71551476 | 71551506 | 71551476 | ID=MS.gene066249.t1.exon1;Parent=MS.gene066249.t1 |
| chr1.1 | CDS | 71551476 | 71551506 | 71551476 | ID=cds.MS.gene066249.t1;Parent=MS.gene066249.t1 |
| chr1.1 | exon | 71549870 | 71550044 | 71549870 | ID=MS.gene066249.t1.exon2;Parent=MS.gene066249.t1 |
| chr1.1 | CDS | 71549870 | 71550044 | 71549870 | ID=cds.MS.gene066249.t1;Parent=MS.gene066249.t1 |
| chr1.1 | exon | 71549288 | 71549605 | 71549288 | ID=MS.gene066249.t1.exon3;Parent=MS.gene066249.t1 |
| chr1.1 | CDS | 71549288 | 71549605 | 71549288 | ID=cds.MS.gene066249.t1;Parent=MS.gene066249.t1 |
| chr1.1 | exon | 71548018 | 71548933 | 71548018 | ID=MS.gene066249.t1.exon4;Parent=MS.gene066249.t1 |
| chr1.1 | CDS | 71548018 | 71548933 | 71548018 | ID=cds.MS.gene066249.t1;Parent=MS.gene066249.t1 |
| Gene Sequence |
| Protein sequence |
