Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06679.t1 | XP_013461436.1 | 91.6 | 705 | 56 | 1 | 1 | 705 | 1 | 702 | 0.00E+00 | 1178.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06679.t1 | Q9XSC3 | 29.7 | 454 | 266 | 17 | 225 | 664 | 483 | 897 | 9.5e-34 | 146.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06679.t1 | A0A072V1A7 | 91.6 | 705 | 56 | 1 | 1 | 705 | 1 | 702 | 0.0e+00 | 1178.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057131 | MS.gene06679 | 0.932496 | 7.81E-95 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37911 | MS.gene06679 | PPI |
| MS.gene06679 | MS.gene057884 | PPI |
| MS.gene057883 | MS.gene06679 | PPI |
| MS.gene06679 | MS.gene67840 | PPI |
| MS.gene81620 | MS.gene06679 | PPI |
| MS.gene070505 | MS.gene06679 | PPI |
| MS.gene06679 | MS.gene056653 | PPI |
| MS.gene057886 | MS.gene06679 | PPI |
| MS.gene070509 | MS.gene06679 | PPI |
| MS.gene070507 | MS.gene06679 | PPI |
| MS.gene06679 | MS.gene81617 | PPI |
| MS.gene003811 | MS.gene06679 | PPI |
| MS.gene81615 | MS.gene06679 | PPI |
| MS.gene06679 | MS.gene070503 | PPI |
| MS.gene070492 | MS.gene06679 | PPI |
| MS.gene016742 | MS.gene06679 | PPI |
| MS.gene06679 | MS.gene40671 | PPI |
| MS.gene06679 | MS.gene45734 | PPI |
| MS.gene06679 | MS.gene016758 | PPI |
| MS.gene070510 | MS.gene06679 | PPI |
| MS.gene81622 | MS.gene06679 | PPI |
| MS.gene016743 | MS.gene06679 | PPI |
| MS.gene06679 | MS.gene070511 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06679.t1 | MTR_3g491920 | 95.461 | 705 | 29 | 1 | 1 | 705 | 1 | 702 | 0.0 | 1355 |
| MS.gene06679.t1 | MTR_1g007740 | 61.295 | 726 | 239 | 15 | 1 | 703 | 1 | 707 | 0.0 | 839 |
| MS.gene06679.t1 | MTR_8g100005 | 43.094 | 724 | 365 | 15 | 11 | 705 | 9 | 714 | 0.0 | 543 |
| MS.gene06679.t1 | MTR_8g092890 | 38.484 | 673 | 323 | 17 | 46 | 703 | 47 | 643 | 2.78e-127 | 392 |
| MS.gene06679.t1 | MTR_2g079740 | 42.593 | 540 | 248 | 12 | 209 | 705 | 338 | 858 | 1.26e-124 | 391 |
| MS.gene06679.t1 | MTR_3g095780 | 43.685 | 483 | 244 | 7 | 225 | 703 | 168 | 626 | 7.63e-116 | 362 |
| MS.gene06679.t1 | MTR_8g100005 | 41.068 | 487 | 252 | 10 | 11 | 470 | 9 | 487 | 9.82e-110 | 342 |
| MS.gene06679.t1 | MTR_7g060420 | 46.565 | 393 | 193 | 6 | 206 | 588 | 379 | 764 | 3.63e-92 | 309 |
| MS.gene06679.t1 | MTR_4g119620 | 29.075 | 227 | 145 | 9 | 343 | 562 | 66 | 283 | 2.18e-19 | 90.5 |
| MS.gene06679.t1 | MTR_4g119620 | 27.350 | 234 | 140 | 9 | 243 | 464 | 19 | 234 | 1.23e-12 | 70.1 |
| MS.gene06679.t1 | MTR_1g072140 | 25.833 | 240 | 158 | 9 | 330 | 562 | 48 | 274 | 1.45e-18 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06679.t1 | AT5G24320 | 46.741 | 721 | 320 | 16 | 11 | 705 | 12 | 694 | 0.0 | 592 |
| MS.gene06679.t1 | AT5G24320 | 46.759 | 725 | 318 | 17 | 11 | 705 | 12 | 698 | 0.0 | 591 |
| MS.gene06679.t1 | AT5G53500 | 47.207 | 716 | 301 | 15 | 1 | 703 | 1 | 652 | 0.0 | 583 |
| MS.gene06679.t1 | AT5G53500 | 47.207 | 716 | 301 | 15 | 1 | 703 | 1 | 652 | 0.0 | 583 |
| MS.gene06679.t1 | AT5G42010 | 48.496 | 532 | 240 | 13 | 191 | 705 | 195 | 709 | 9.03e-164 | 488 |
| MS.gene06679.t1 | AT1G64610 | 49.240 | 526 | 221 | 12 | 189 | 705 | 159 | 647 | 1.68e-158 | 473 |
| MS.gene06679.t1 | AT1G64610 | 49.240 | 526 | 221 | 12 | 189 | 705 | 159 | 647 | 1.68e-158 | 473 |
| MS.gene06679.t1 | AT5G42010 | 54.118 | 340 | 151 | 4 | 191 | 525 | 195 | 534 | 6.05e-126 | 386 |
| MS.gene06679.t1 | AT5G54200 | 44.643 | 504 | 239 | 12 | 224 | 703 | 336 | 823 | 2.89e-122 | 384 |
| MS.gene06679.t1 | AT3G15470 | 42.495 | 513 | 249 | 12 | 224 | 705 | 386 | 883 | 1.66e-118 | 376 |
| MS.gene06679.t1 | AT1G48870 | 40.816 | 490 | 225 | 11 | 216 | 702 | 163 | 590 | 5.49e-104 | 330 |
| MS.gene06679.t1 | AT1G48870 | 40.816 | 490 | 225 | 11 | 216 | 702 | 163 | 590 | 5.49e-104 | 330 |
| MS.gene06679.t1 | AT1G48870 | 40.816 | 490 | 225 | 11 | 216 | 702 | 163 | 590 | 5.49e-104 | 330 |
| MS.gene06679.t1 | AT5G02430 | 39.884 | 519 | 265 | 13 | 224 | 702 | 384 | 895 | 1.23e-95 | 316 |
| MS.gene06679.t1 | AT2G37670 | 40.038 | 522 | 261 | 13 | 226 | 702 | 380 | 894 | 1.44e-92 | 308 |
| MS.gene06679.t1 | AT2G37670 | 40.038 | 522 | 261 | 13 | 226 | 702 | 379 | 893 | 1.44e-92 | 308 |
| MS.gene06679.t1 | AT3G49660 | 23.385 | 325 | 176 | 12 | 245 | 562 | 18 | 276 | 7.28e-18 | 85.9 |
| MS.gene06679.t1 | AT4G02730 | 29.224 | 219 | 138 | 10 | 348 | 558 | 78 | 287 | 4.91e-17 | 83.6 |
| MS.gene06679.t1 | AT2G16405 | 25.214 | 234 | 159 | 4 | 343 | 560 | 202 | 435 | 2.24e-14 | 76.6 |
| MS.gene06679.t1 | AT5G67320 | 24.691 | 243 | 142 | 9 | 243 | 449 | 357 | 594 | 1.57e-11 | 68.2 |
Find 168 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTGACACCATTGTTTA+TGG | 0.074372 | 3.3:-76588066 | MS.gene06679:CDS |
| GATTCCCAACTATGCTTAAT+TGG | 0.172014 | 3.3:-76586971 | MS.gene06679:CDS |
| CAGAGGGATAACTGGCTTTC+AGG | 0.188767 | 3.3:-76586930 | MS.gene06679:intron |
| ATGCTTGAGGGGTCAATTTC+AGG | 0.194762 | 3.3:+76588113 | None:intergenic |
| AAGAGGATGTTGTGTCTATT+AGG | 0.227175 | 3.3:-76588940 | MS.gene06679:CDS |
| GAGGAGAAGCTTCCTGTTTC+GGG | 0.230139 | 3.3:-76586225 | MS.gene06679:CDS |
| CGAGGAGAAGCTTCCTGTTT+CGG | 0.236200 | 3.3:-76586226 | MS.gene06679:CDS |
| GTACAGGTAGCCCGTAATTT+TGG | 0.245270 | 3.3:+76586064 | None:intergenic |
| GCCATCTCAAGATGGAAATT+TGG | 0.253348 | 3.3:-76588606 | MS.gene06679:CDS |
| ACATGTAACCATAACTTTCT+TGG | 0.275795 | 3.3:+76586794 | None:intergenic |
| TGGTTACTAGAACGGTAAAT+AGG | 0.280748 | 3.3:-76588436 | MS.gene06679:CDS |
| CCTAACTTTCTTAGATTTCA+TGG | 0.283800 | 3.3:+76586455 | None:intergenic |
| GAGAAAGAAGCAGGTGGGTT+GGG | 0.287380 | 3.3:+76586303 | None:intergenic |
| TCCAACAACCGGAAGATCTT+AGG | 0.295299 | 3.3:+76587975 | None:intergenic |
| GATGCGCACCTTTCCGTCTA+TGG | 0.305937 | 3.3:+76587533 | None:intergenic |
| GTGAGTTCTTCGGAGGAATT+TGG | 0.313989 | 3.3:-76588650 | MS.gene06679:CDS |
| CTACGCTCTCTCACACTCTT+TGG | 0.324124 | 3.3:+76588833 | None:intergenic |
| GATGAAGATTATTTCATTAG+TGG | 0.325769 | 3.3:-76587558 | MS.gene06679:CDS |
| GGGATTGTTGGATCTTTAGA+AGG | 0.327630 | 3.3:-76587333 | MS.gene06679:CDS |
| GTGGTGAAGATGGGGTTGTT+CGG | 0.332946 | 3.3:-76588181 | MS.gene06679:CDS |
| GACACCATTGTTTATGGATA+AGG | 0.339226 | 3.3:-76588060 | MS.gene06679:CDS |
| CTTCCTGGCAGAGGGATAAC+TGG | 0.340161 | 3.3:-76586938 | MS.gene06679:CDS |
| TGGTGAAGATGGGGTTGTTC+GGG | 0.350996 | 3.3:-76588180 | MS.gene06679:CDS |
| ATTGATAGATAGAGAGTTTG+AGG | 0.355153 | 3.3:-76588474 | MS.gene06679:CDS |
| TTCGGAGGAATTTGGTTTAG+TGG | 0.361491 | 3.3:-76588642 | MS.gene06679:CDS |
| AGGACTCTAATGTATATCTA+TGG | 0.364797 | 3.3:-76586506 | MS.gene06679:CDS |
| TAGTCCTGATGGGCAGTATC+TGG | 0.368035 | 3.3:-76588210 | MS.gene06679:CDS |
| GAGGATTGTGTAAATGTCTC+TGG | 0.370035 | 3.3:-76588515 | MS.gene06679:CDS |
| TGGGCATAGAAGTGAAGTTT+TGG | 0.376344 | 3.3:-76587931 | MS.gene06679:CDS |
| TAGACGGAAAGGTGCGCATC+TGG | 0.381026 | 3.3:-76587530 | MS.gene06679:CDS |
| CCGATTCTCAGGTTGTTGAT+TGG | 0.381470 | 3.3:-76587500 | MS.gene06679:CDS |
| GCCTAAGATCTTCCGGTTGT+TGG | 0.381485 | 3.3:-76587976 | MS.gene06679:CDS |
| CCATGAAATCTAAGAAAGTT+AGG | 0.382192 | 3.3:-76586455 | MS.gene06679:CDS |
| GAAGGGAGCTATGCAGTCTC+AGG | 0.387775 | 3.3:-76588350 | MS.gene06679:CDS |
| ATGAAATAATCTTCATCAAC+AGG | 0.393624 | 3.3:+76587564 | None:intergenic |
| CTGACAAAACTGTCCGACTA+TGG | 0.394030 | 3.3:-76587770 | MS.gene06679:CDS |
| GTTGATAATGATAGAGAAGA+AGG | 0.394764 | 3.3:-76588368 | MS.gene06679:CDS |
| TTGCTCTAGTGTGAGTTCTT+CGG | 0.402105 | 3.3:-76588660 | MS.gene06679:CDS |
| AGAAAGAAGCAGGTGGGTTG+GGG | 0.408797 | 3.3:+76586304 | None:intergenic |
| TCAAGATTCCAAGAAAGTTA+TGG | 0.411964 | 3.3:-76586802 | MS.gene06679:CDS |
| CTGGCTACAGGTGGTGAAGA+TGG | 0.415140 | 3.3:-76588191 | MS.gene06679:CDS |
| TTGATTATGAAGTGTGGATT+CGG | 0.416684 | 3.3:-76588859 | MS.gene06679:CDS |
| TTGGTCTTGGAGCCCGAAAC+AGG | 0.417453 | 3.3:+76586213 | None:intergenic |
| GCGGTCTTTCTCATGCTCTT+CGG | 0.420033 | 3.3:+76588023 | None:intergenic |
| AAGTCACACTTCATTTCAAA+CGG | 0.422322 | 3.3:+76586041 | None:intergenic |
| GGTTACTAGAACGGTAAATA+GGG | 0.425943 | 3.3:-76588435 | MS.gene06679:CDS |
| TTCCAAAGGGATCTGCAACC+TGG | 0.426271 | 3.3:-76586251 | MS.gene06679:CDS |
| ATATCTATGGAACGTTAATC+AGG | 0.429417 | 3.3:-76586493 | MS.gene06679:CDS |
| GGCCAGGTTGCAGATCCCTT+TGG | 0.430320 | 3.3:+76586249 | None:intergenic |
| ACCCCACGCATGAGCATTGT+TGG | 0.432490 | 3.3:+76586131 | None:intergenic |
| TTTACCAATTAAGCATAGTT+GGG | 0.432871 | 3.3:+76586967 | None:intergenic |
| CTGGACGATACCCGATTCTC+AGG | 0.435686 | 3.3:-76587511 | MS.gene06679:CDS |
| CCCATCAGGACTAAATTTCA+TGG | 0.436002 | 3.3:+76588220 | None:intergenic |
| TTAAATAATACCTGCCCATC+CGG | 0.437117 | 3.3:+76587438 | None:intergenic |
| CCAATCAACAACCTGAGAAT+CGG | 0.440688 | 3.3:+76587500 | None:intergenic |
| GTATAACAGGGAGGGATTGT+TGG | 0.454570 | 3.3:-76587345 | MS.gene06679:intron |
| TGGTCATTGTGACTGCAGGC+TGG | 0.456531 | 3.3:-76586107 | MS.gene06679:CDS |
| AAATTGCACCTTCATGCGCT+TGG | 0.462786 | 3.3:+76588246 | None:intergenic |
| ACCATGAAATTTAGTCCTGA+TGG | 0.466588 | 3.3:-76588221 | MS.gene06679:CDS |
| TCGGGTGTGGCAAGTGGTTG+AGG | 0.469415 | 3.3:-76588162 | MS.gene06679:CDS |
| TACCGCAACTGATGCGTTTG+AGG | 0.470561 | 3.3:+76586416 | None:intergenic |
| CAATGCTCATGCGTGGGGTA+TGG | 0.470834 | 3.3:-76586127 | MS.gene06679:CDS |
| CTAACTTTCTTAGATTTCAT+GGG | 0.472148 | 3.3:+76586456 | None:intergenic |
| GATCTTTAGAAGGAAATTGT+TGG | 0.473234 | 3.3:-76587323 | MS.gene06679:CDS |
| TGGCTACAGGTGGTGAAGAT+GGG | 0.475427 | 3.3:-76588190 | MS.gene06679:CDS |
| GTAGCCAGATACTGCCCATC+AGG | 0.476689 | 3.3:+76588206 | None:intergenic |
| TCACAAGTCAGAATCCTTGA+TGG | 0.477119 | 3.3:-76586765 | MS.gene06679:CDS |
| AGGATTGTGTAAATGTCTCT+GGG | 0.480040 | 3.3:-76588514 | MS.gene06679:CDS |
| ACATTGGACTGCCTGTGTTA+AGG | 0.480580 | 3.3:+76586574 | None:intergenic |
| TTGTGACTGCAGGCTGGGAC+GGG | 0.481187 | 3.3:-76586101 | MS.gene06679:CDS |
| AGAGGATGTTGTGTCTATTA+GGG | 0.481348 | 3.3:-76588939 | MS.gene06679:CDS |
| GTGTGAGAGAGCGTAGGAGG+AGG | 0.484269 | 3.3:-76588826 | MS.gene06679:CDS |
| AAGATGGGGTTGTTCGGGTG+TGG | 0.485043 | 3.3:-76588175 | MS.gene06679:CDS |
| GATGGGCAGTATCTGGCTAC+AGG | 0.486225 | 3.3:-76588203 | MS.gene06679:CDS |
| AGGAAGCTTCTCCTCGGGCC+AGG | 0.488808 | 3.3:+76586233 | None:intergenic |
| AACGGTAAATAGGGCGAGAA+GGG | 0.489976 | 3.3:-76588426 | MS.gene06679:CDS |
| ATTGTGACTGCAGGCTGGGA+CGG | 0.490386 | 3.3:-76586102 | MS.gene06679:CDS |
| CAATCAACAACCTGAGAATC+GGG | 0.492398 | 3.3:+76587501 | None:intergenic |
| AAATCAGTTGGTAGTTGCTA+AGG | 0.492824 | 3.3:-76588543 | MS.gene06679:CDS |
| AGAGAAAGAAGCAGGTGGGT+TGG | 0.493090 | 3.3:+76586302 | None:intergenic |
| ACTTCATTTCAAACGGGTAC+AGG | 0.498608 | 3.3:+76586048 | None:intergenic |
| ACCAGATAATCACTTGCAGC+TGG | 0.500109 | 3.3:-76586993 | MS.gene06679:intron |
| GAAACAGGAAGCTTCTCCTC+GGG | 0.503691 | 3.3:+76586228 | None:intergenic |
| CGAAACAGGAAGCTTCTCCT+CGG | 0.504206 | 3.3:+76586227 | None:intergenic |
| AGTCACACTTCATTTCAAAC+GGG | 0.505736 | 3.3:+76586042 | None:intergenic |
| TCCAAATTTCCATCTTGAGA+TGG | 0.506574 | 3.3:+76588605 | None:intergenic |
| GAGGAGGTTTATGAAGAGCA+TGG | 0.509035 | 3.3:-76588810 | MS.gene06679:CDS |
| ACTGTAAAGTAAATGCTTGA+GGG | 0.510241 | 3.3:+76588101 | None:intergenic |
| AACATCATTGCTGCGAAAGT+CGG | 0.511514 | 3.3:-76586187 | MS.gene06679:CDS |
| AGTGAATCGTGACCATTGCT+TGG | 0.512373 | 3.3:-76587745 | MS.gene06679:CDS |
| ACGCATCAGTTGCGGTACCT+TGG | 0.514857 | 3.3:-76586410 | MS.gene06679:CDS |
| GAAATTTGGAGAAAAGAATG+AGG | 0.519213 | 3.3:-76588592 | MS.gene06679:CDS |
| TTCATTAGTGGATCCATAGA+CGG | 0.522706 | 3.3:-76587546 | MS.gene06679:CDS |
| AACTTTCATCGCTTTACTTG+AGG | 0.524102 | 3.3:-76588277 | MS.gene06679:CDS |
| ATGTTATCGACCGGATGGGC+AGG | 0.526250 | 3.3:-76587448 | MS.gene06679:intron |
| AATCATATGGGTAGTTTCAG+TGG | 0.527946 | 3.3:-76588992 | None:intergenic |
| TTGATAATGATAGAGAAGAA+GGG | 0.528008 | 3.3:-76588367 | MS.gene06679:CDS |
| TCAGTGGAGAAGAAGATTGT+CGG | 0.529362 | 3.3:-76588976 | MS.gene06679:CDS |
| TAAATAGGGCGAGAAGGGGT+TGG | 0.531097 | 3.3:-76588421 | MS.gene06679:CDS |
| AGATAGTAGTGGTTCTGAAG+AGG | 0.531135 | 3.3:-76588714 | MS.gene06679:CDS |
| AGGAGGTTTATGAAGAGCAT+GGG | 0.535423 | 3.3:-76588809 | MS.gene06679:CDS |
| CACTGTAAAGTAAATGCTTG+AGG | 0.537714 | 3.3:+76588100 | None:intergenic |
| GCTATGCAGTCTCAGGGTGT+AGG | 0.538360 | 3.3:-76588343 | MS.gene06679:CDS |
| ATAACTTTCTTGGAATCTTG+AGG | 0.539357 | 3.3:+76586804 | None:intergenic |
| AAATCACATTAAGCCCATCA+AGG | 0.539545 | 3.3:+76586751 | None:intergenic |
| GACTGCAGTATGTTATCGAC+CGG | 0.543308 | 3.3:-76587457 | MS.gene06679:CDS |
| AGAGAGTTTGAGGATGCAGA+TGG | 0.543559 | 3.3:-76588464 | MS.gene06679:CDS |
| TCTGGGGTGTCTCATTGTCA+AGG | 0.544039 | 3.3:-76588497 | MS.gene06679:CDS |
| AAGTAAAGGTCCGTCAATGT+AGG | 0.547509 | 3.3:-76588313 | MS.gene06679:CDS |
| TGTGCATCATTTACCTCAGA+CGG | 0.548187 | 3.3:-76586552 | MS.gene06679:CDS |
| GGTATGGTCATTGTGACTGC+AGG | 0.549386 | 3.3:-76586111 | MS.gene06679:CDS |
| CCATGAAATTTAGTCCTGAT+GGG | 0.550381 | 3.3:-76588220 | MS.gene06679:CDS |
| TGGTTCAGAGAGAAAGAAGC+AGG | 0.550963 | 3.3:+76586294 | None:intergenic |
| TTCCTCAAACGCATCAGTTG+CGG | 0.553600 | 3.3:-76586418 | MS.gene06679:CDS |
| GGTCATTGTGACTGCAGGCT+GGG | 0.557152 | 3.3:-76586106 | MS.gene06679:CDS |
| AGAGTGTGAGAGAGCGTAGG+AGG | 0.559566 | 3.3:-76588829 | MS.gene06679:CDS |
| CACAAGTCAGAATCCTTGAT+GGG | 0.560457 | 3.3:-76586764 | MS.gene06679:CDS |
| GAGTGATTGTTCAAATCAGT+TGG | 0.560983 | 3.3:-76588555 | MS.gene06679:CDS |
| TAAAATATGTTTCCCGTCTG+AGG | 0.561223 | 3.3:+76586539 | None:intergenic |
| TACCAACAATGCTCATGCGT+GGG | 0.562604 | 3.3:-76586133 | MS.gene06679:CDS |
| GGTTGTTCGGGTGTGGCAAG+TGG | 0.564414 | 3.3:-76588168 | MS.gene06679:CDS |
| GCAGTATGTTATCGACCGGA+TGG | 0.565468 | 3.3:-76587453 | MS.gene06679:CDS |
| CACGATTCACTTGCCATAGT+CGG | 0.575462 | 3.3:+76587757 | None:intergenic |
| AACCATTGCATGAGTTCCGT+GGG | 0.575505 | 3.3:-76587950 | MS.gene06679:CDS |
| GAACGGTAAATAGGGCGAGA+AGG | 0.577669 | 3.3:-76588427 | MS.gene06679:CDS |
| AAAAGAAACTTCCTGGCAGA+GGG | 0.579638 | 3.3:-76586946 | MS.gene06679:CDS |
| CTCTAGTGTGAGTTCTTCGG+AGG | 0.585376 | 3.3:-76588657 | MS.gene06679:CDS |
| AAGCCAGTTATCCCTCTGCC+AGG | 0.589263 | 3.3:+76586935 | None:intergenic |
| AAACCATTGCATGAGTTCCG+TGG | 0.589350 | 3.3:-76587951 | MS.gene06679:CDS |
| GGCTACAGGTGGTGAAGATG+GGG | 0.590519 | 3.3:-76588189 | MS.gene06679:CDS |
| CAAGATATCCAAGCGCATGA+AGG | 0.592474 | 3.3:-76588254 | MS.gene06679:CDS |
| CTGTAAAGTAAATGCTTGAG+GGG | 0.592786 | 3.3:+76588102 | None:intergenic |
| GAAAGAAGAAGAGATAGTAG+TGG | 0.594074 | 3.3:-76588725 | MS.gene06679:CDS |
| TGGTGATGTGGTTACTAGAA+CGG | 0.595840 | 3.3:-76588444 | MS.gene06679:CDS |
| AATAACTTGCCATCTCAAGA+TGG | 0.595950 | 3.3:-76588614 | MS.gene06679:CDS |
| GGTAGTTGCTAAGGAATCTG+AGG | 0.598779 | 3.3:-76588534 | MS.gene06679:CDS |
| AAACTTCACTTCTATGCCCA+CGG | 0.602774 | 3.3:+76587934 | None:intergenic |
| GTGTAGGCTTCAGAAAGTAA+AGG | 0.602811 | 3.3:-76588327 | MS.gene06679:CDS |
| GTGCATCATTTACCTCAGAC+GGG | 0.603220 | 3.3:-76586551 | MS.gene06679:CDS |
| GAGGTAAATGATGCACACAT+TGG | 0.603566 | 3.3:+76586558 | None:intergenic |
| TAGTGGATCCATAGACGGAA+AGG | 0.604269 | 3.3:-76587541 | MS.gene06679:CDS |
| TAACTTTCTTAGATTTCATG+GGG | 0.605262 | 3.3:+76586457 | None:intergenic |
| AAGAGGAATTTAGTTCATGT+CGG | 0.608009 | 3.3:-76588697 | MS.gene06679:CDS |
| GTGAAAACACTTCCAAGCAA+TGG | 0.611173 | 3.3:+76587733 | None:intergenic |
| TGCCCACGGAACTCATGCAA+TGG | 0.612153 | 3.3:+76587948 | None:intergenic |
| AAATTTGGAGAAAAGAATGA+GGG | 0.614888 | 3.3:-76588591 | MS.gene06679:CDS |
| CAGTATGTTATCGACCGGAT+GGG | 0.618616 | 3.3:-76587452 | MS.gene06679:CDS |
| CAAAGAGTGTGAGAGAGCGT+AGG | 0.619829 | 3.3:-76588832 | MS.gene06679:CDS |
| TCAGTTGCGGTACCTTGGCA+CGG | 0.626640 | 3.3:-76586405 | MS.gene06679:CDS |
| TTCAGAGAGAAAGAAGCAGG+TGG | 0.627337 | 3.3:+76586297 | None:intergenic |
| ACAACCGGAAGATCTTAGGC+GGG | 0.627533 | 3.3:+76587979 | None:intergenic |
| AACAACACAAGCTGAATCTG+CGG | 0.632119 | 3.3:+76588004 | None:intergenic |
| TCAATGTAGGAAGAAAATGA+AGG | 0.633828 | 3.3:-76588300 | MS.gene06679:CDS |
| GTACCAACAATGCTCATGCG+TGG | 0.637345 | 3.3:-76586134 | MS.gene06679:CDS |
| TCAGAGAGAAAGAAGCAGGT+GGG | 0.641323 | 3.3:+76586298 | None:intergenic |
| GGAGGTTTCAAACCGTGCCA+AGG | 0.641872 | 3.3:+76586393 | None:intergenic |
| TGAGGATGCAGATGGTGATG+TGG | 0.643720 | 3.3:-76588456 | MS.gene06679:CDS |
| AACAACCGGAAGATCTTAGG+CGG | 0.646128 | 3.3:+76587978 | None:intergenic |
| AAGGGAGCTATGCAGTCTCA+GGG | 0.648697 | 3.3:-76588349 | MS.gene06679:CDS |
| GGGATCTGCAACCTGGCCCG+AGG | 0.648859 | 3.3:-76586244 | MS.gene06679:CDS |
| ACCAACAATGCTCATGCGTG+GGG | 0.652027 | 3.3:-76586132 | MS.gene06679:CDS |
| TGTAATTGCATAACAACTTG+TGG | 0.663052 | 3.3:+76586327 | None:intergenic |
| GGTGTGGCAAGTGGTTGAGG+AGG | 0.668449 | 3.3:-76588159 | MS.gene06679:CDS |
| ACGGTAAATAGGGCGAGAAG+GGG | 0.672129 | 3.3:-76588425 | MS.gene06679:CDS |
| AGAAAGTTAGGTCTTGTGAG+CGG | 0.675224 | 3.3:-76586443 | MS.gene06679:CDS |
| GGGCAGTATCTGGCTACAGG+TGG | 0.702356 | 3.3:-76588200 | MS.gene06679:CDS |
| GGATTGTGTAAATGTCTCTG+GGG | 0.731454 | 3.3:-76588513 | MS.gene06679:CDS |
| ATTGAGATTGATGACGTGCG+TGG | 0.740580 | 3.3:-76588390 | MS.gene06679:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAACTTAAATGGAATA+TGG | + | chr3.3:76587797-76587816 | None:intergenic | 15.0% |
| !! | AAATGTTAATCAAGTTATAT+TGG | - | chr3.3:76587934-76587953 | MS.gene06679:CDS | 15.0% |
| !! | AATGTTAATCAAGTTATATT+GGG | - | chr3.3:76587935-76587954 | MS.gene06679:CDS | 15.0% |
| !! | ATAAAAACATTCCAAAATTA+CGG | - | chr3.3:76588967-76588986 | MS.gene06679:CDS | 15.0% |
| !!! | GTTTTAATAATCAAAATGTT+AGG | - | chr3.3:76587855-76587874 | MS.gene06679:intron | 15.0% |
| !! | AGGTCAAAAAATAACTTAAA+TGG | + | chr3.3:76587804-76587823 | None:intergenic | 20.0% |
| !! | GAATAATATGATGTATAACA+GGG | - | chr3.3:76587685-76587704 | MS.gene06679:intron | 20.0% |
| !! | TAAAAACATTCCAAAATTAC+GGG | - | chr3.3:76588968-76588987 | MS.gene06679:CDS | 20.0% |
| !!! | AAATTCATTGTATTTTGAGA+AGG | - | chr3.3:76586283-76586302 | MS.gene06679:CDS | 20.0% |
| !!! | AGAATACTATCTAAAATTTG+AGG | + | chr3.3:76588373-76588392 | None:intergenic | 20.0% |
| !!! | ATAACTTGATTAACATTTTG+CGG | + | chr3.3:76587932-76587951 | None:intergenic | 20.0% |
| !!! | GTTCATTACATTTTATTTTC+AGG | - | chr3.3:76588445-76588464 | MS.gene06679:CDS | 20.0% |
| !!! | TGTTGGTTTTATAAAATATC+AGG | - | chr3.3:76587736-76587755 | MS.gene06679:CDS | 20.0% |
| ! | AAATGGAATATGGAGATATA+TGG | + | chr3.3:76587787-76587806 | None:intergenic | 25.0% |
| ! | AAATTTGGAGAAAAGAATGA+GGG | - | chr3.3:76586451-76586470 | MS.gene06679:CDS | 25.0% |
| ! | AAGCACATGTTTAAATTGAA+TGG | + | chr3.3:76587643-76587662 | None:intergenic | 25.0% |
| ! | AATGGAATATGGAGATATAT+GGG | + | chr3.3:76587786-76587805 | None:intergenic | 25.0% |
| ! | AATTATATGTTCTGTCACTA+AGG | - | chr3.3:76588423-76588442 | MS.gene06679:CDS | 25.0% |
| ! | AATTGAAAACCAGAAATGTT+AGG | + | chr3.3:76588020-76588039 | None:intergenic | 25.0% |
| ! | ATGAAATAATCTTCATCAAC+AGG | + | chr3.3:76587481-76587500 | None:intergenic | 25.0% |
| ! | CGAATAATATGATGTATAAC+AGG | - | chr3.3:76587684-76587703 | MS.gene06679:intron | 25.0% |
| ! | CTAACTTTCTTAGATTTCAT+GGG | + | chr3.3:76588589-76588608 | None:intergenic | 25.0% |
| ! | GATGAAGATTATTTCATTAG+TGG | - | chr3.3:76587484-76587503 | MS.gene06679:CDS | 25.0% |
| ! | TAACTTTCTTAGATTTCATG+GGG | + | chr3.3:76588588-76588607 | None:intergenic | 25.0% |
| ! | TACTTCTTATTCAAAATCTG+TGG | + | chr3.3:76587894-76587913 | None:intergenic | 25.0% |
| ! | TTTAAACATGTGCTTTATAG+AGG | - | chr3.3:76587648-76587667 | MS.gene06679:intron | 25.0% |
| ! | TTTACCAATTAAGCATAGTT+GGG | + | chr3.3:76588078-76588097 | None:intergenic | 25.0% |
| ! | TTTATGGATAAGGAAAAACT+TGG | - | chr3.3:76586992-76587011 | MS.gene06679:intron | 25.0% |
| !! | ATGATGATGATGATGATAAA+GGG | - | chr3.3:76586141-76586160 | MS.gene06679:CDS | 25.0% |
| !! | CACAATTTGTTTGTATTTGA+TGG | - | chr3.3:76587425-76587444 | MS.gene06679:intron | 25.0% |
| !! | CTTTTTCTCTGACAATTTTT+TGG | - | chr3.3:76588178-76588197 | MS.gene06679:CDS | 25.0% |
| !! | GACATTCAATTGTTCATTTT+CGG | + | chr3.3:76588680-76588699 | None:intergenic | 25.0% |
| !! | TTTTACCAATTAAGCATAGT+TGG | + | chr3.3:76588079-76588098 | None:intergenic | 25.0% |
| !! | TTTTCCTTATCCATAAACAA+TGG | + | chr3.3:76586989-76587008 | None:intergenic | 25.0% |
| !!! | TTGATAATGATAGAGAAGAA+GGG | - | chr3.3:76586675-76586694 | MS.gene06679:intron | 25.0% |
| !!! | TTGATTTTGATTATGAAGTG+TGG | - | chr3.3:76586177-76586196 | MS.gene06679:CDS | 25.0% |
| !!! | TTTTTTGACCTTTCGATTTT+TGG | - | chr3.3:76587813-76587832 | MS.gene06679:intron | 25.0% |
| AAGAAGATACTGCATTCAAA+AGG | + | chr3.3:76587242-76587261 | None:intergenic | 30.0% | |
| AAGACTCCAAGAAAAAATCT+TGG | + | chr3.3:76588771-76588790 | None:intergenic | 30.0% | |
| AATATGATGTATAACAGGGA+GGG | - | chr3.3:76587689-76587708 | MS.gene06679:intron | 30.0% | |
| ACATGTAACCATAACTTTCT+TGG | + | chr3.3:76588251-76588270 | None:intergenic | 30.0% | |
| ACTGTAAAGTAAATGCTTGA+GGG | + | chr3.3:76586944-76586963 | None:intergenic | 30.0% | |
| AGGACTCTAATGTATATCTA+TGG | - | chr3.3:76588536-76588555 | MS.gene06679:CDS | 30.0% | |
| AGTATGTAGGGATTTAACAA+AGG | + | chr3.3:76588336-76588355 | None:intergenic | 30.0% | |
| ATAACTTTCTTGGAATCTTG+AGG | + | chr3.3:76588241-76588260 | None:intergenic | 30.0% | |
| ATATCTATGGAACGTTAATC+AGG | - | chr3.3:76588549-76588568 | MS.gene06679:CDS | 30.0% | |
| ATCATCATCATCATCATCAT+CGG | + | chr3.3:76586138-76586157 | None:intergenic | 30.0% | |
| ATTGATAGATAGAGAGTTTG+AGG | - | chr3.3:76586568-76586587 | MS.gene06679:CDS | 30.0% | |
| ATTGGTAAAAAGAAACTTCC+TGG | - | chr3.3:76588089-76588108 | MS.gene06679:CDS | 30.0% | |
| CCATGAAATCTAAGAAAGTT+AGG | - | chr3.3:76588587-76588606 | MS.gene06679:CDS | 30.0% | |
| CCTAACTTTCTTAGATTTCA+TGG | + | chr3.3:76588590-76588609 | None:intergenic | 30.0% | |
| GAAATTTGGAGAAAAGAATG+AGG | - | chr3.3:76586450-76586469 | MS.gene06679:CDS | 30.0% | |
| TAATATGATGTATAACAGGG+AGG | - | chr3.3:76587688-76587707 | MS.gene06679:intron | 30.0% | |
| TCAAGATTCCAAGAAAGTTA+TGG | - | chr3.3:76588240-76588259 | MS.gene06679:CDS | 30.0% | |
| TCAATGTAGGAAGAAAATGA+AGG | - | chr3.3:76586742-76586761 | MS.gene06679:CDS | 30.0% | |
| TCAATTGACACCATTGTTTA+TGG | - | chr3.3:76586976-76586995 | MS.gene06679:CDS | 30.0% | |
| TGTAATTGCATAACAACTTG+TGG | + | chr3.3:76588718-76588737 | None:intergenic | 30.0% | |
| TTGATTATGAAGTGTGGATT+CGG | - | chr3.3:76586183-76586202 | MS.gene06679:CDS | 30.0% | |
| ! | AAGAGGAATTTAGTTCATGT+CGG | - | chr3.3:76586345-76586364 | MS.gene06679:CDS | 30.0% |
| ! | GATCTTTAGAAGGAAATTGT+TGG | - | chr3.3:76587719-76587738 | MS.gene06679:intron | 30.0% |
| ! | GATGATGATGATGATGATAA+AGG | - | chr3.3:76586140-76586159 | MS.gene06679:CDS | 30.0% |
| ! | GTGTTTTCACACAGTAATTA+TGG | - | chr3.3:76587322-76587341 | MS.gene06679:CDS | 30.0% |
| ! | TCATTTTCTTCCTACATTGA+CGG | + | chr3.3:76586742-76586761 | None:intergenic | 30.0% |
| ! | TGATGATGATGATGATAAAG+GGG | - | chr3.3:76586142-76586161 | MS.gene06679:CDS | 30.0% |
| !! | GTTGATAATGATAGAGAAGA+AGG | - | chr3.3:76586674-76586693 | MS.gene06679:intron | 30.0% |
| !! | TTTTGAGAAGGAAGAGATTA+TGG | - | chr3.3:76586295-76586314 | MS.gene06679:CDS | 30.0% |
| !!! | CAATGATGTTTTTTTGGTCT+TGG | + | chr3.3:76588845-76588864 | None:intergenic | 30.0% |
| !!! | TCTGAACCAAGATTTTTTCT+TGG | - | chr3.3:76588762-76588781 | MS.gene06679:CDS | 30.0% |
| AAATCACATTAAGCCCATCA+AGG | + | chr3.3:76588294-76588313 | None:intergenic | 35.0% | |
| AACTTTCATCGCTTTACTTG+AGG | - | chr3.3:76586765-76586784 | MS.gene06679:CDS | 35.0% | |
| AAGAGGATGTTGTGTCTATT+AGG | - | chr3.3:76586102-76586121 | MS.gene06679:CDS | 35.0% | |
| AATCACTTAAGACTTGAGCT+TGG | - | chr3.3:76587993-76588012 | MS.gene06679:CDS | 35.0% | |
| AATTGTGAGATGAACTGTTG+TGG | + | chr3.3:76587412-76587431 | None:intergenic | 35.0% | |
| ACCATGAAATTTAGTCCTGA+TGG | - | chr3.3:76586821-76586840 | MS.gene06679:intron | 35.0% | |
| ACCTAAAGAAGCCTACAAAT+CGG | + | chr3.3:76587370-76587389 | None:intergenic | 35.0% | |
| AGAGGATGTTGTGTCTATTA+GGG | - | chr3.3:76586103-76586122 | MS.gene06679:CDS | 35.0% | |
| AGGATTGTGTAAATGTCTCT+GGG | - | chr3.3:76586528-76586547 | MS.gene06679:CDS | 35.0% | |
| CACTGTAAAGTAAATGCTTG+AGG | + | chr3.3:76586945-76586964 | None:intergenic | 35.0% | |
| CCATGAAATTTAGTCCTGAT+GGG | - | chr3.3:76586822-76586841 | MS.gene06679:intron | 35.0% | |
| CTGTAAAGTAAATGCTTGAG+GGG | + | chr3.3:76586943-76586962 | None:intergenic | 35.0% | |
| CTGTTGTGGTCAAACAAATT+AGG | + | chr3.3:76587398-76587417 | None:intergenic | 35.0% | |
| GAAAGAAGAAGAGATAGTAG+TGG | - | chr3.3:76586317-76586336 | MS.gene06679:CDS | 35.0% | |
| GACACCATTGTTTATGGATA+AGG | - | chr3.3:76586982-76587001 | MS.gene06679:CDS | 35.0% | |
| GAGTGATTGTTCAAATCAGT+TGG | - | chr3.3:76586487-76586506 | MS.gene06679:CDS | 35.0% | |
| GATTCCCAACTATGCTTAAT+TGG | - | chr3.3:76588071-76588090 | MS.gene06679:CDS | 35.0% | |
| GCGAAATCAACAAGTATGTA+GGG | + | chr3.3:76588348-76588367 | None:intergenic | 35.0% | |
| GGTTACTAGAACGGTAAATA+GGG | - | chr3.3:76586607-76586626 | MS.gene06679:intron | 35.0% | |
| TAAAATATGTTTCCCGTCTG+AGG | + | chr3.3:76588506-76588525 | None:intergenic | 35.0% | |
| TCCAAATTTCCATCTTGAGA+TGG | + | chr3.3:76586440-76586459 | None:intergenic | 35.0% | |
| TGCGAAATCAACAAGTATGT+AGG | + | chr3.3:76588349-76588368 | None:intergenic | 35.0% | |
| TGGTTACTAGAACGGTAAAT+AGG | - | chr3.3:76586606-76586625 | MS.gene06679:intron | 35.0% | |
| TTAAATAATACCTGCCCATC+CGG | + | chr3.3:76587607-76587626 | None:intergenic | 35.0% | |
| ! | AATAACTTGCCATCTCAAGA+TGG | - | chr3.3:76586428-76586447 | MS.gene06679:CDS | 35.0% |
| ! | AATTGTTCATTTTCGGTGAC+TGG | + | chr3.3:76588673-76588692 | None:intergenic | 35.0% |
| ! | ACATATTTTATCAGCATGCG+AGG | - | chr3.3:76588516-76588535 | MS.gene06679:CDS | 35.0% |
| ! | GCATTTCTATTCCGATTTGT+AGG | - | chr3.3:76587356-76587375 | MS.gene06679:intron | 35.0% |
| ! | TTCATTAGTGGATCCATAGA+CGG | - | chr3.3:76587496-76587515 | MS.gene06679:CDS | 35.0% |
| ! | TTCTTGGAGTCTTTTCCAAA+GGG | - | chr3.3:76588778-76588797 | MS.gene06679:CDS | 35.0% |
| ! | TTTCTTGGAGTCTTTTCCAA+AGG | - | chr3.3:76588777-76588796 | MS.gene06679:CDS | 35.0% |
| !! | AAATCAGTTGGTAGTTGCTA+AGG | - | chr3.3:76586499-76586518 | MS.gene06679:CDS | 35.0% |
| !! | CAGAAGTACCAAAAATCGAA+AGG | + | chr3.3:76587824-76587843 | None:intergenic | 35.0% |
| !! | TTATTTTCAGGCCTTAACAC+AGG | - | chr3.3:76588457-76588476 | MS.gene06679:CDS | 35.0% |
| !!! | TCGCAGCAATGATGTTTTTT+TGG | + | chr3.3:76588851-76588870 | None:intergenic | 35.0% |
| AAAAAGAAACTTCCTGGCAG+AGG | - | chr3.3:76588095-76588114 | MS.gene06679:CDS | 40.0% | |
| AAAAGAAACTTCCTGGCAGA+GGG | - | chr3.3:76588096-76588115 | MS.gene06679:CDS | 40.0% | |
| AAACTTCACTTCTATGCCCA+CGG | + | chr3.3:76587111-76587130 | None:intergenic | 40.0% | |
| AACAACACAAGCTGAATCTG+CGG | + | chr3.3:76587041-76587060 | None:intergenic | 40.0% | |
| AACATCATTGCTGCGAAAGT+CGG | - | chr3.3:76588855-76588874 | MS.gene06679:CDS | 40.0% | |
| AAGTAAAGGTCCGTCAATGT+AGG | - | chr3.3:76586729-76586748 | MS.gene06679:intron | 40.0% | |
| CAATCAACAACCTGAGAATC+GGG | + | chr3.3:76587544-76587563 | None:intergenic | 40.0% | |
| CACAAGTCAGAATCCTTGAT+GGG | - | chr3.3:76588278-76588297 | MS.gene06679:CDS | 40.0% | |
| CCAATCAACAACCTGAGAAT+CGG | + | chr3.3:76587545-76587564 | None:intergenic | 40.0% | |
| CCCATCAGGACTAAATTTCA+TGG | + | chr3.3:76586825-76586844 | None:intergenic | 40.0% | |
| GAGGATTGTGTAAATGTCTC+TGG | - | chr3.3:76586527-76586546 | MS.gene06679:CDS | 40.0% | |
| GAGGTAAATGATGCACACAT+TGG | + | chr3.3:76588487-76588506 | None:intergenic | 40.0% | |
| GCCATCTCAAGATGGAAATT+TGG | - | chr3.3:76586436-76586455 | MS.gene06679:CDS | 40.0% | |
| GGATTGTGTAAATGTCTCTG+GGG | - | chr3.3:76586529-76586548 | MS.gene06679:CDS | 40.0% | |
| GGGATTGTTGGATCTTTAGA+AGG | - | chr3.3:76587709-76587728 | MS.gene06679:intron | 40.0% | |
| GTGAAAACACTTCCAAGCAA+TGG | + | chr3.3:76587312-76587331 | None:intergenic | 40.0% | |
| GTGTAGGCTTCAGAAAGTAA+AGG | - | chr3.3:76586715-76586734 | MS.gene06679:intron | 40.0% | |
| TCACAAGTCAGAATCCTTGA+TGG | - | chr3.3:76588277-76588296 | MS.gene06679:CDS | 40.0% | |
| TCAGTGGAGAAGAAGATTGT+CGG | - | chr3.3:76586066-76586085 | MS.gene06679:CDS | 40.0% | |
| TGTGCATCATTTACCTCAGA+CGG | - | chr3.3:76588490-76588509 | MS.gene06679:CDS | 40.0% | |
| TTGCTCTAGTGTGAGTTCTT+CGG | - | chr3.3:76586382-76586401 | MS.gene06679:CDS | 40.0% | |
| ! | AGAAAGTTAGGTCTTGTGAG+CGG | - | chr3.3:76588599-76588618 | MS.gene06679:CDS | 40.0% |
| ! | AGGAGGTTTATGAAGAGCAT+GGG | - | chr3.3:76586233-76586252 | MS.gene06679:CDS | 40.0% |
| ! | GCAATGGTTTTTCCAACAAC+CGG | + | chr3.3:76587081-76587100 | None:intergenic | 40.0% |
| ! | TCCGATTTGTAGGCTTCTTT+AGG | - | chr3.3:76587366-76587385 | MS.gene06679:intron | 40.0% |
| ! | TGGGCATAGAAGTGAAGTTT+TGG | - | chr3.3:76587111-76587130 | MS.gene06679:intron | 40.0% |
| ! | TGGTGATGTGGTTACTAGAA+CGG | - | chr3.3:76586598-76586617 | MS.gene06679:intron | 40.0% |
| ! | TTCGGAGGAATTTGGTTTAG+TGG | - | chr3.3:76586400-76586419 | MS.gene06679:CDS | 40.0% |
| !! | AGATAGTAGTGGTTCTGAAG+AGG | - | chr3.3:76586328-76586347 | MS.gene06679:CDS | 40.0% |
| !!! | GTGAAGTTTTGGATCTCTCT+TGG | - | chr3.3:76587122-76587141 | MS.gene06679:intron | 40.0% |
| !!! | TCGGTTTTTTGATGCTGAAG+AGG | - | chr3.3:76586085-76586104 | MS.gene06679:CDS | 40.0% |
| AAACCATTGCATGAGTTCCG+TGG | - | chr3.3:76587091-76587110 | MS.gene06679:intron | 45.0% | |
| AAATTGCACCTTCATGCGCT+TGG | + | chr3.3:76586799-76586818 | None:intergenic | 45.0% | |
| AACAACCGGAAGATCTTAGG+CGG | + | chr3.3:76587067-76587086 | None:intergenic | 45.0% | |
| AACCATTGCATGAGTTCCGT+GGG | - | chr3.3:76587092-76587111 | MS.gene06679:intron | 45.0% | |
| AACGGTAAATAGGGCGAGAA+GGG | - | chr3.3:76586616-76586635 | MS.gene06679:intron | 45.0% | |
| ACATTGGACTGCCTGTGTTA+AGG | + | chr3.3:76588471-76588490 | None:intergenic | 45.0% | |
| ACCAGATAATCACTTGCAGC+TGG | - | chr3.3:76588049-76588068 | MS.gene06679:CDS | 45.0% | |
| AGAGAGTTTGAGGATGCAGA+TGG | - | chr3.3:76586578-76586597 | MS.gene06679:CDS | 45.0% | |
| AGTGAATCGTGACCATTGCT+TGG | - | chr3.3:76587297-76587316 | MS.gene06679:intron | 45.0% | |
| ATGCTTGAGGGGTCAATTTC+AGG | + | chr3.3:76586932-76586951 | None:intergenic | 45.0% | |
| CAAGATATCCAAGCGCATGA+AGG | - | chr3.3:76586788-76586807 | MS.gene06679:CDS | 45.0% | |
| CACGATTCACTTGCCATAGT+CGG | + | chr3.3:76587288-76587307 | None:intergenic | 45.0% | |
| CAGTATGTTATCGACCGGAT+GGG | - | chr3.3:76587590-76587609 | MS.gene06679:intron | 45.0% | |
| CTGACAAAACTGTCCGACTA+TGG | - | chr3.3:76587272-76587291 | MS.gene06679:intron | 45.0% | |
| GACTGCAGTATGTTATCGAC+CGG | - | chr3.3:76587585-76587604 | MS.gene06679:CDS | 45.0% | |
| GAGCTTGGTCCTAACATTTC+TGG | - | chr3.3:76588008-76588027 | MS.gene06679:CDS | 45.0% | |
| GAGGAGGTTTATGAAGAGCA+TGG | - | chr3.3:76586232-76586251 | MS.gene06679:CDS | 45.0% | |
| GGTAGTTGCTAAGGAATCTG+AGG | - | chr3.3:76586508-76586527 | MS.gene06679:CDS | 45.0% | |
| GTATAACAGGGAGGGATTGT+TGG | - | chr3.3:76587697-76587716 | MS.gene06679:intron | 45.0% | |
| GTGAGTTCTTCGGAGGAATT+TGG | - | chr3.3:76586392-76586411 | MS.gene06679:CDS | 45.0% | |
| GTGCATCATTTACCTCAGAC+GGG | - | chr3.3:76588491-76588510 | MS.gene06679:CDS | 45.0% | |
| TACCAACAATGCTCATGCGT+GGG | - | chr3.3:76588909-76588928 | MS.gene06679:CDS | 45.0% | |
| TCAGAGAGAAAGAAGCAGGT+GGG | + | chr3.3:76588747-76588766 | None:intergenic | 45.0% | |
| TCCAACAACCGGAAGATCTT+AGG | + | chr3.3:76587070-76587089 | None:intergenic | 45.0% | |
| TCCAGCTGCAAGTGATTATC+TGG | + | chr3.3:76588053-76588072 | None:intergenic | 45.0% | |
| TGGTTCAGAGAGAAAGAAGC+AGG | + | chr3.3:76588751-76588770 | None:intergenic | 45.0% | |
| TTCAGAGAGAAAGAAGCAGG+TGG | + | chr3.3:76588748-76588767 | None:intergenic | 45.0% | |
| TTCCTCAAACGCATCAGTTG+CGG | - | chr3.3:76588624-76588643 | MS.gene06679:CDS | 45.0% | |
| ! | CCGATTCTCAGGTTGTTGAT+TGG | - | chr3.3:76587542-76587561 | MS.gene06679:CDS | 45.0% |
| ! | GTACAGGTAGCCCGTAATTT+TGG | + | chr3.3:76588981-76589000 | None:intergenic | 45.0% |
| ! | TAGTGGATCCATAGACGGAA+AGG | - | chr3.3:76587501-76587520 | MS.gene06679:CDS | 45.0% |
| ! | TGTTCATTTTCGGTGACTGG+AGG | + | chr3.3:76588670-76588689 | None:intergenic | 45.0% |
| ! | TTTTCCCGCCTAAGATCTTC+CGG | - | chr3.3:76587059-76587078 | MS.gene06679:intron | 45.0% |
| !! | ATTGAGATTGATGACGTGCG+TGG | - | chr3.3:76586652-76586671 | MS.gene06679:intron | 45.0% |
| AAGGGAGCTATGCAGTCTCA+GGG | - | chr3.3:76586693-76586712 | MS.gene06679:intron | 50.0% | |
| ACAACCGGAAGATCTTAGGC+GGG | + | chr3.3:76587066-76587085 | None:intergenic | 50.0% | |
| ACCAACAATGCTCATGCGTG+GGG | - | chr3.3:76588910-76588929 | MS.gene06679:CDS | 50.0% | |
| ACGGTAAATAGGGCGAGAAG+GGG | - | chr3.3:76586617-76586636 | MS.gene06679:intron | 50.0% | |
| AGAGAAAGAAGCAGGTGGGT+TGG | + | chr3.3:76588743-76588762 | None:intergenic | 50.0% | |
| CGAAACAGGAAGCTTCTCCT+CGG | + | chr3.3:76588818-76588837 | None:intergenic | 50.0% | |
| CGAGGAGAAGCTTCCTGTTT+CGG | - | chr3.3:76588816-76588835 | MS.gene06679:CDS | 50.0% | |
| CTACGCTCTCTCACACTCTT+TGG | + | chr3.3:76586212-76586231 | None:intergenic | 50.0% | |
| CTCTAGTGTGAGTTCTTCGG+AGG | - | chr3.3:76586385-76586404 | MS.gene06679:CDS | 50.0% | |
| GAAACAGGAAGCTTCTCCTC+GGG | + | chr3.3:76588817-76588836 | None:intergenic | 50.0% | |
| GAACGGTAAATAGGGCGAGA+AGG | - | chr3.3:76586615-76586634 | MS.gene06679:intron | 50.0% | |
| GAGGAGAAGCTTCCTGTTTC+GGG | - | chr3.3:76588817-76588836 | MS.gene06679:CDS | 50.0% | |
| GCAGTATGTTATCGACCGGA+TGG | - | chr3.3:76587589-76587608 | MS.gene06679:intron | 50.0% | |
| GCCTAAGATCTTCCGGTTGT+TGG | - | chr3.3:76587066-76587085 | MS.gene06679:intron | 50.0% | |
| GCGGTCTTTCTCATGCTCTT+CGG | + | chr3.3:76587022-76587041 | None:intergenic | 50.0% | |
| GGTATGGTCATTGTGACTGC+AGG | - | chr3.3:76588931-76588950 | MS.gene06679:CDS | 50.0% | |
| GTACCAACAATGCTCATGCG+TGG | - | chr3.3:76588908-76588927 | MS.gene06679:CDS | 50.0% | |
| GTGGTGAAGATGGGGTTGTT+CGG | - | chr3.3:76586861-76586880 | MS.gene06679:intron | 50.0% | |
| TAAATAGGGCGAGAAGGGGT+TGG | - | chr3.3:76586621-76586640 | MS.gene06679:intron | 50.0% | |
| TACCGCAACTGATGCGTTTG+AGG | + | chr3.3:76588629-76588648 | None:intergenic | 50.0% | |
| TGGCTACAGGTGGTGAAGAT+GGG | - | chr3.3:76586852-76586871 | MS.gene06679:intron | 50.0% | |
| TGGTGAAGATGGGGTTGTTC+GGG | - | chr3.3:76586862-76586881 | MS.gene06679:intron | 50.0% | |
| TTCCAAAGGGATCTGCAACC+TGG | - | chr3.3:76588791-76588810 | MS.gene06679:CDS | 50.0% | |
| ! | CAAAGAGTGTGAGAGAGCGT+AGG | - | chr3.3:76586210-76586229 | MS.gene06679:CDS | 50.0% |
| ! | GAGAAAGAAGCAGGTGGGTT+GGG | + | chr3.3:76588742-76588761 | None:intergenic | 50.0% |
| ! | TAGTCCTGATGGGCAGTATC+TGG | - | chr3.3:76586832-76586851 | MS.gene06679:intron | 50.0% |
| ! | TCTGGGGTGTCTCATTGTCA+AGG | - | chr3.3:76586545-76586564 | MS.gene06679:CDS | 50.0% |
| ! | TGAGGATGCAGATGGTGATG+TGG | - | chr3.3:76586586-76586605 | MS.gene06679:intron | 50.0% |
| !! | AGAAAGAAGCAGGTGGGTTG+GGG | + | chr3.3:76588741-76588760 | None:intergenic | 50.0% |
| !! | CAGAGGGATAACTGGCTTTC+AGG | - | chr3.3:76588112-76588131 | MS.gene06679:CDS | 50.0% |
| AAGATGGGGTTGTTCGGGTG+TGG | - | chr3.3:76586867-76586886 | MS.gene06679:intron | 55.0% | |
| AAGCCAGTTATCCCTCTGCC+AGG | + | chr3.3:76588110-76588129 | None:intergenic | 55.0% | |
| ACGCATCAGTTGCGGTACCT+TGG | - | chr3.3:76588632-76588651 | MS.gene06679:CDS | 55.0% | |
| ATGTTATCGACCGGATGGGC+AGG | - | chr3.3:76587594-76587613 | MS.gene06679:intron | 55.0% | |
| ATTGTGACTGCAGGCTGGGA+CGG | - | chr3.3:76588940-76588959 | MS.gene06679:CDS | 55.0% | |
| CAATGCTCATGCGTGGGGTA+TGG | - | chr3.3:76588915-76588934 | MS.gene06679:CDS | 55.0% | |
| CTGGACGATACCCGATTCTC+AGG | - | chr3.3:76587531-76587550 | MS.gene06679:CDS | 55.0% | |
| CTGGCTACAGGTGGTGAAGA+TGG | - | chr3.3:76586851-76586870 | MS.gene06679:intron | 55.0% | |
| CTTCCTGGCAGAGGGATAAC+TGG | - | chr3.3:76588104-76588123 | MS.gene06679:CDS | 55.0% | |
| GAAGGGAGCTATGCAGTCTC+AGG | - | chr3.3:76586692-76586711 | MS.gene06679:intron | 55.0% | |
| GATGCGCACCTTTCCGTCTA+TGG | + | chr3.3:76587512-76587531 | None:intergenic | 55.0% | |
| GATGGGCAGTATCTGGCTAC+AGG | - | chr3.3:76586839-76586858 | MS.gene06679:intron | 55.0% | |
| GCTATGCAGTCTCAGGGTGT+AGG | - | chr3.3:76586699-76586718 | MS.gene06679:intron | 55.0% | |
| GGAGGTTTCAAACCGTGCCA+AGG | + | chr3.3:76588652-76588671 | None:intergenic | 55.0% | |
| GGCTACAGGTGGTGAAGATG+GGG | - | chr3.3:76586853-76586872 | MS.gene06679:intron | 55.0% | |
| GGTCATTGTGACTGCAGGCT+GGG | - | chr3.3:76588936-76588955 | MS.gene06679:CDS | 55.0% | |
| GTAGCCAGATACTGCCCATC+AGG | + | chr3.3:76586839-76586858 | None:intergenic | 55.0% | |
| TCAGTTGCGGTACCTTGGCA+CGG | - | chr3.3:76588637-76588656 | MS.gene06679:CDS | 55.0% | |
| TGCCCACGGAACTCATGCAA+TGG | + | chr3.3:76587097-76587116 | None:intergenic | 55.0% | |
| TGGTCATTGTGACTGCAGGC+TGG | - | chr3.3:76588935-76588954 | MS.gene06679:CDS | 55.0% | |
| ! | ACCCCACGCATGAGCATTGT+TGG | + | chr3.3:76588914-76588933 | None:intergenic | 55.0% |
| ! | AGAGTGTGAGAGAGCGTAGG+AGG | - | chr3.3:76586213-76586232 | MS.gene06679:CDS | 55.0% |
| ! | TAGACGGAAAGGTGCGCATC+TGG | - | chr3.3:76587512-76587531 | MS.gene06679:CDS | 55.0% |
| !! | TTGGTCTTGGAGCCCGAAAC+AGG | + | chr3.3:76588832-76588851 | None:intergenic | 55.0% |
| GGCCAGGTTGCAGATCCCTT+TGG | + | chr3.3:76588796-76588815 | None:intergenic | 60.0% | |
| GGGCAGTATCTGGCTACAGG+TGG | - | chr3.3:76586842-76586861 | MS.gene06679:intron | 60.0% | |
| GGTGTGGCAAGTGGTTGAGG+AGG | - | chr3.3:76586883-76586902 | MS.gene06679:intron | 60.0% | |
| GGTTGTTCGGGTGTGGCAAG+TGG | - | chr3.3:76586874-76586893 | MS.gene06679:intron | 60.0% | |
| TCGGGTGTGGCAAGTGGTTG+AGG | - | chr3.3:76586880-76586899 | MS.gene06679:intron | 60.0% | |
| TTGTGACTGCAGGCTGGGAC+GGG | - | chr3.3:76588941-76588960 | MS.gene06679:CDS | 60.0% | |
| ! | GTGTGAGAGAGCGTAGGAGG+AGG | - | chr3.3:76586216-76586235 | MS.gene06679:CDS | 60.0% |
| AGGAAGCTTCTCCTCGGGCC+AGG | + | chr3.3:76588812-76588831 | None:intergenic | 65.0% | |
| GGGATCTGCAACCTGGCCCG+AGG | - | chr3.3:76588798-76588817 | MS.gene06679:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76586056 | 76589008 | 76586056 | ID=MS.gene06679 |
| chr3.3 | mRNA | 76586056 | 76589008 | 76586056 | ID=MS.gene06679.t1;Parent=MS.gene06679 |
| chr3.3 | exon | 76587908 | 76589008 | 76587908 | ID=MS.gene06679.t1.exon1;Parent=MS.gene06679.t1 |
| chr3.3 | CDS | 76587908 | 76589008 | 76587908 | ID=cds.MS.gene06679.t1;Parent=MS.gene06679.t1 |
| chr3.3 | exon | 76587721 | 76587811 | 76587721 | ID=MS.gene06679.t1.exon2;Parent=MS.gene06679.t1 |
| chr3.3 | CDS | 76587721 | 76587811 | 76587721 | ID=cds.MS.gene06679.t1;Parent=MS.gene06679.t1 |
| chr3.3 | exon | 76587449 | 76587606 | 76587449 | ID=MS.gene06679.t1.exon3;Parent=MS.gene06679.t1 |
| chr3.3 | CDS | 76587449 | 76587606 | 76587449 | ID=cds.MS.gene06679.t1;Parent=MS.gene06679.t1 |
| chr3.3 | exon | 76587307 | 76587358 | 76587307 | ID=MS.gene06679.t1.exon4;Parent=MS.gene06679.t1 |
| chr3.3 | CDS | 76587307 | 76587358 | 76587307 | ID=cds.MS.gene06679.t1;Parent=MS.gene06679.t1 |
| chr3.3 | exon | 76586931 | 76587010 | 76586931 | ID=MS.gene06679.t1.exon5;Parent=MS.gene06679.t1 |
| chr3.3 | CDS | 76586931 | 76587010 | 76586931 | ID=cds.MS.gene06679.t1;Parent=MS.gene06679.t1 |
| chr3.3 | exon | 76586739 | 76586832 | 76586739 | ID=MS.gene06679.t1.exon6;Parent=MS.gene06679.t1 |
| chr3.3 | CDS | 76586739 | 76586832 | 76586739 | ID=cds.MS.gene06679.t1;Parent=MS.gene06679.t1 |
| chr3.3 | exon | 76586056 | 76586597 | 76586056 | ID=MS.gene06679.t1.exon7;Parent=MS.gene06679.t1 |
| chr3.3 | CDS | 76586056 | 76586597 | 76586056 | ID=cds.MS.gene06679.t1;Parent=MS.gene06679.t1 |
| Gene Sequence |
| Protein sequence |
