AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068987


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068987.t1 MTR_8g442750 98.339 301 5 0 1 301 1 301 0.0 606
MS.gene068987.t1 MTR_4g064887 31.395 258 158 6 14 265 15 259 1.91e-27 107
MS.gene068987.t1 MTR_7g113650 30.882 272 155 10 9 264 34 288 1.29e-25 103
MS.gene068987.t1 MTR_7g063270 29.961 257 166 5 14 265 16 263 2.81e-25 102
MS.gene068987.t1 MTR_4g131740 31.698 265 160 8 14 268 40 293 9.28e-25 101
MS.gene068987.t1 MTR_1g082760 30.075 266 165 7 9 264 34 288 2.61e-24 100
MS.gene068987.t1 MTR_4g064883 29.644 253 169 4 14 265 14 258 5.34e-24 98.6
MS.gene068987.t1 MTR_7g063260 28.517 263 161 6 14 264 16 263 5.75e-23 95.9
MS.gene068987.t1 MTR_3g068070 27.734 256 170 6 14 265 15 259 2.64e-22 94.0
MS.gene068987.t1 MTR_4g132850 31.274 259 160 5 11 265 4 248 3.02e-22 93.6
MS.gene068987.t1 MTR_3g068065 27.969 261 163 9 14 265 17 261 3.31e-22 94.0
MS.gene068987.t1 MTR_3g068175 29.615 260 160 8 14 265 17 261 5.31e-22 93.6
MS.gene068987.t1 MTR_7g071680 29.693 293 165 9 4 269 19 297 5.38e-22 94.0
MS.gene068987.t1 MTR_4g052350 31.439 264 153 9 14 267 14 259 1.06e-21 92.4
MS.gene068987.t1 MTR_3g068155 29.167 264 156 8 14 265 19 263 1.08e-21 92.4
MS.gene068987.t1 MTR_3g085740 29.213 267 174 6 3 267 67 320 2.01e-21 92.8
MS.gene068987.t1 MTR_1196s0010 30.677 251 161 6 17 267 277 514 2.86e-21 94.0
MS.gene068987.t1 MTR_7g063320 27.481 262 171 5 14 267 15 265 1.32e-20 89.4
MS.gene068987.t1 MTR_4g052320 30.943 265 154 8 14 267 8 254 1.50e-20 89.4
MS.gene068987.t1 MTR_3g068175 29.231 260 165 8 14 265 17 265 1.82e-20 89.4
MS.gene068987.t1 MTR_4g052300 29.670 273 164 8 14 276 8 262 2.28e-20 89.0
MS.gene068987.t1 MTR_3g068085 27.165 254 174 5 14 265 15 259 2.71e-20 88.6
MS.gene068987.t1 MTR_3g020670 31.047 277 163 9 3 265 7 269 3.00e-20 88.6
MS.gene068987.t1 MTR_7g063390 27.574 272 182 6 1 265 1 264 4.25e-20 88.2
MS.gene068987.t1 MTR_4g052340 30.483 269 159 9 14 272 14 264 8.11e-20 87.4
MS.gene068987.t1 MTR_7g063330 27.237 257 173 5 14 265 15 262 1.02e-19 87.0
MS.gene068987.t1 MTR_7g094510 30.000 260 161 9 14 264 6 253 3.22e-19 85.5
MS.gene068987.t1 MTR_7g063360 27.798 277 175 7 1 265 1 264 3.28e-19 85.5
MS.gene068987.t1 MTR_4g064887 32.663 199 115 6 14 206 15 200 1.58e-18 82.8
MS.gene068987.t1 MTR_7g105460 30.483 269 162 10 14 272 13 266 2.35e-18 83.6
MS.gene068987.t1 MTR_4g058840 30.000 260 164 9 14 264 11 261 7.14e-18 82.0
MS.gene068987.t1 MTR_4g058820 30.000 260 164 9 14 264 11 261 7.14e-18 82.0
MS.gene068987.t1 MTR_7g105580 30.888 259 140 10 14 264 8 235 7.57e-18 81.6
MS.gene068987.t1 MTR_8g096620 31.390 223 137 6 9 227 40 250 1.38e-17 82.4
MS.gene068987.t1 MTR_8g096580 32.843 204 112 7 12 206 43 230 5.52e-17 80.1
MS.gene068987.t1 MTR_1g068955 30.627 271 170 8 1 263 1 261 1.26e-16 78.6
MS.gene068987.t1 MTR_7g094520 28.625 269 174 10 4 265 2 259 1.58e-16 78.2
MS.gene068987.t1 MTR_7g110140 30.855 269 167 10 14 274 6 263 1.80e-16 77.8
MS.gene068987.t1 MTR_4g058810 28.897 263 163 9 14 264 11 261 2.17e-16 77.8
MS.gene068987.t1 MTR_7g107670 30.827 266 155 11 14 265 33 283 2.21e-16 78.2
MS.gene068987.t1 MTR_6g035395 30.534 262 144 11 14 265 5 238 3.04e-16 77.0
MS.gene068987.t1 MTR_4g064883 30.928 194 125 4 14 206 14 199 4.14e-16 75.9
MS.gene068987.t1 MTR_2g090165 28.358 268 172 10 14 274 6 260 4.91e-16 76.6
MS.gene068987.t1 MTR_7g105590 31.472 197 121 5 14 207 8 193 1.04e-15 74.3
MS.gene068987.t1 MTR_7g083870 29.699 266 159 12 14 265 35 286 2.07e-15 75.5
MS.gene068987.t1 MTR_4g078630 29.474 285 162 11 1 265 5 270 2.20e-15 75.1
MS.gene068987.t1 MTR_7g110130 27.132 258 172 8 14 265 6 253 1.01e-14 73.2
MS.gene068987.t1 MTR_7g110160 28.148 270 160 10 14 278 6 246 2.11e-14 71.6
MS.gene068987.t1 MTR_7g063270 26.154 260 123 8 14 265 16 214 3.97e-13 67.8
MS.gene068987.t1 MTR_3g098470 29.932 147 96 2 15 161 33 172 2.90e-12 66.6
MS.gene068987.t1 MTR_8g096060 31.293 147 91 3 15 161 35 171 3.66e-11 63.2
MS.gene068987.t1 MTR_1g031180 28.571 147 98 2 15 161 38 177 4.49e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068987.t1 AT3G12800 78.114 297 64 1 6 301 2 298 1.06e-162 454
MS.gene068987.t1 AT2G07640 75.333 150 36 1 131 279 1 150 5.57e-70 214
MS.gene068987.t1 AT3G05260 31.502 273 167 7 5 268 27 288 2.79e-29 113
MS.gene068987.t1 AT1G54870 31.538 260 158 7 14 264 84 332 3.44e-28 111
MS.gene068987.t1 AT1G54870 31.538 260 158 7 14 264 82 330 3.51e-28 111
MS.gene068987.t1 AT1G63380 32.184 261 158 9 14 264 15 266 6.65e-27 107
MS.gene068987.t1 AT1G63380 32.184 261 158 9 14 264 19 270 8.14e-27 106
MS.gene068987.t1 AT1G63380 32.184 261 158 9 14 264 17 268 9.72e-27 106
MS.gene068987.t1 AT1G63380 32.184 261 158 9 14 264 22 273 9.86e-27 106
MS.gene068987.t1 AT2G17845 34.470 264 150 10 14 264 47 300 1.46e-26 106
MS.gene068987.t1 AT1G52340 31.636 275 161 9 14 272 18 281 5.97e-25 101
MS.gene068987.t1 AT1G62610 31.801 261 159 9 14 264 13 264 8.71e-25 100
MS.gene068987.t1 AT1G62610 31.801 261 159 9 14 264 15 266 8.77e-25 101
MS.gene068987.t1 AT1G62610 31.801 261 159 9 14 264 19 270 9.06e-25 101
MS.gene068987.t1 AT1G62610 31.801 261 159 9 14 264 14 265 9.63e-25 100
MS.gene068987.t1 AT1G36580 68.254 63 20 0 228 290 1 63 7.20e-24 96.7
MS.gene068987.t1 AT4G05530 30.888 259 161 4 11 265 6 250 1.39e-23 97.4
MS.gene068987.t1 AT2G29260 29.804 255 166 5 14 265 68 312 3.29e-23 97.8
MS.gene068987.t1 AT3G55310 33.083 266 148 11 14 264 17 267 9.70e-23 95.5
MS.gene068987.t1 AT2G29150 28.627 255 166 7 14 264 16 258 1.20e-22 95.1
MS.gene068987.t1 AT2G29290 29.924 264 172 7 14 274 7 260 1.25e-22 95.1
MS.gene068987.t1 AT3G55290 33.206 262 153 10 14 264 18 268 1.29e-22 95.1
MS.gene068987.t1 AT3G55290 33.206 262 153 10 14 264 17 267 1.36e-22 95.1
MS.gene068987.t1 AT3G46170 33.083 266 148 11 14 264 26 276 1.02e-21 92.8
MS.gene068987.t1 AT5G06060 27.820 266 177 5 14 275 9 263 1.89e-21 91.7
MS.gene068987.t1 AT2G29370 27.344 256 171 5 14 265 16 260 3.07e-21 91.3
MS.gene068987.t1 AT5G18210 30.483 269 153 9 14 265 8 259 3.54e-21 90.9
MS.gene068987.t1 AT3G04000 29.787 282 173 8 1 267 1 272 5.23e-21 90.9
MS.gene068987.t1 AT2G29360 28.030 264 177 7 14 274 16 269 7.04e-21 90.5
MS.gene068987.t1 AT3G51680 31.338 284 168 9 5 269 23 298 1.14e-20 90.5
MS.gene068987.t1 AT5G50600 32.995 197 120 4 12 206 43 229 1.23e-20 90.9
MS.gene068987.t1 AT5G50700 32.995 197 120 4 12 206 43 229 1.23e-20 90.9
MS.gene068987.t1 AT1G07440 28.517 263 178 5 14 275 12 265 1.89e-20 89.0
MS.gene068987.t1 AT2G29350 26.953 256 169 6 14 264 15 257 2.51e-20 89.0
MS.gene068987.t1 AT4G03140 31.752 274 160 9 14 274 78 337 3.27e-20 89.7
MS.gene068987.t1 AT2G29310 28.782 271 168 10 14 275 7 261 1.00e-19 87.0
MS.gene068987.t1 AT3G26770 28.030 264 166 9 14 265 41 292 1.51e-19 87.4
MS.gene068987.t1 AT2G29320 27.547 265 178 4 14 274 13 267 1.99e-19 86.3
MS.gene068987.t1 AT2G29340 29.032 279 181 7 14 288 7 272 4.42e-19 85.9
MS.gene068987.t1 AT2G29330 31.250 272 158 10 14 274 7 260 9.59e-19 84.3
MS.gene068987.t1 AT4G13180 28.846 260 166 9 14 265 13 261 1.23e-18 84.0
MS.gene068987.t1 AT2G29340 28.571 266 175 6 14 275 7 261 7.84e-18 81.6
MS.gene068987.t1 AT1G24360 28.625 269 171 6 1 267 70 319 1.09e-17 82.4
MS.gene068987.t1 AT2G47140 29.545 264 167 9 14 270 6 257 1.68e-17 80.9
MS.gene068987.t1 AT5G18210 30.827 266 148 10 14 260 8 256 2.13e-17 80.9
MS.gene068987.t1 AT1G07450 28.030 264 176 9 14 274 8 260 2.69e-17 80.1
MS.gene068987.t1 AT2G47130 28.996 269 161 10 14 270 6 256 8.57e-17 79.0
MS.gene068987.t1 AT2G29290 28.395 243 161 7 35 274 11 243 9.24e-17 78.6
MS.gene068987.t1 AT2G30670 27.881 269 173 7 14 275 7 261 1.16e-16 78.6
MS.gene068987.t1 AT2G47120 28.571 273 156 10 14 270 7 256 1.48e-16 78.2
MS.gene068987.t1 AT2G47120 28.571 273 156 10 14 270 6 255 1.86e-16 77.8
MS.gene068987.t1 AT2G29300 26.641 259 170 7 14 265 7 252 2.14e-16 77.8
MS.gene068987.t1 AT2G29300 26.641 259 170 7 14 265 7 252 2.67e-16 77.8
MS.gene068987.t1 AT3G29250 30.000 270 152 11 12 265 42 290 1.11e-15 76.3
MS.gene068987.t1 AT3G47350 32.338 201 118 6 12 207 42 229 1.53e-15 75.9
MS.gene068987.t1 AT3G47350 32.338 201 118 6 12 207 42 229 2.16e-15 75.9
MS.gene068987.t1 AT3G26760 27.174 276 173 9 14 274 36 298 2.17e-15 75.5
MS.gene068987.t1 AT3G29250 29.779 272 154 11 14 269 6 256 2.21e-15 74.7
MS.gene068987.t1 AT5G50770 34.518 197 113 5 12 204 43 227 3.30e-15 75.5
MS.gene068987.t1 AT3G29250 30.224 268 150 11 14 265 42 288 3.91e-15 74.7
MS.gene068987.t1 AT3G47360 29.534 193 124 5 17 207 48 230 1.91e-14 72.8
MS.gene068987.t1 AT3G03980 28.044 271 165 10 11 264 11 268 1.08e-13 70.1
MS.gene068987.t1 AT4G10020 28.283 198 124 5 7 198 40 225 1.80e-13 70.5
MS.gene068987.t1 AT3G29260 29.119 261 159 10 14 264 6 250 9.17e-13 67.4
MS.gene068987.t1 AT2G29310 26.275 255 163 10 30 275 21 259 2.38e-12 66.2
MS.gene068987.t1 AT3G42960 29.434 265 154 11 17 264 11 259 3.05e-12 66.2
MS.gene068987.t1 AT2G29320 25.100 251 170 6 30 274 11 249 4.18e-12 65.5
MS.gene068987.t1 AT3G47350 36.893 103 64 1 12 113 42 144 9.11e-12 64.7
MS.gene068987.t1 AT5G50690 29.146 199 129 5 12 208 43 231 6.22e-11 62.4
MS.gene068987.t1 AT5G50590 29.146 199 129 5 12 208 43 231 6.22e-11 62.4
MS.gene068987.t1 AT5G50690 33.333 132 86 2 12 141 43 174 9.89e-11 61.2
MS.gene068987.t1 AT5G50590 33.333 132 86 2 12 141 43 174 9.89e-11 61.2

Find 86 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACCAATTGGTTCATTTC+TGG 0.141423 8.1:-57014499 None:intergenic
ATTAGTGCTACCTTGCATTA+TGG 0.276429 8.1:+57012102 MS.gene068987:CDS
ATGCCAGGAGTGTCACTTAT+TGG 0.283238 8.1:-57012462 None:intergenic
CGCTTTCGATTCCAGCTGTT+GGG 0.292110 8.1:+57010514 MS.gene068987:CDS
CCTTGCATTATGGAGCTTCT+TGG 0.293806 8.1:+57012112 MS.gene068987:CDS
TTCAAACCAGAAATCTTAAA+AGG 0.319717 8.1:+57010354 MS.gene068987:CDS
ACTGGCGGAGCGTCGGGAAT+TGG 0.320337 8.1:+57010393 MS.gene068987:CDS
GGCAAAGTAGCTTTAATAAC+TGG 0.335212 8.1:+57010375 MS.gene068987:CDS
TGTATAAACTTGGGGAGAAA+TGG 0.343265 8.1:+57012538 MS.gene068987:CDS
CCTCTGCTACCTATTTCTTC+AGG 0.344151 8.1:-57012498 None:intergenic
AAGAAACTTGGCACTGGAAT+GGG 0.348357 8.1:+57012398 MS.gene068987:CDS
ACCTGTCTCACTGCCTCCTT+TGG 0.366952 8.1:-57014453 None:intergenic
TTTGAAATATCGACACAATT+GGG 0.371607 8.1:+57010417 MS.gene068987:CDS
TTAATAACTGGCGGAGCGTC+GGG 0.374098 8.1:+57010387 MS.gene068987:CDS
AGTTCTTCAATCTGCTGTTT+CGG 0.377117 8.1:+57010482 MS.gene068987:CDS
GTTTGAAATATCGACACAAT+TGG 0.389501 8.1:+57010416 MS.gene068987:CDS
CTGAGGATCTTTCGCCGAAT+GGG 0.391331 8.1:+57010655 MS.gene068987:CDS
CTGGCGGAGCGTCGGGAATT+GGG 0.395868 8.1:+57010394 MS.gene068987:CDS
GATTATGATATTCGAGTCAA+TGG 0.397358 8.1:+57012426 MS.gene068987:CDS
ATTCCAGCTGTTGGGTTTGA+AGG 0.400062 8.1:+57010522 MS.gene068987:CDS
TTTAAGATTTCTGGTTTGAA+TGG 0.409904 8.1:-57010351 None:intergenic
CACTCCTGGCATGAGTAAAC+TGG 0.411577 8.1:+57012473 MS.gene068987:CDS
AAACTGGCTCCTGAAGAAAT+AGG 0.417404 8.1:+57012489 MS.gene068987:CDS
TGTGAAGGAAAATACATTAA+CGG 0.419004 8.1:+57014378 MS.gene068987:intron
TCGCCGAATGGGTTTCGAAC+AGG 0.420284 8.1:+57010666 MS.gene068987:CDS
TCGCTTTCGATTCCAGCTGT+TGG 0.427172 8.1:+57010513 MS.gene068987:CDS
GTATAAACTTGGGGAGAAAT+GGG 0.441031 8.1:+57012539 MS.gene068987:CDS
ATGGAGGACTTTGGCTGAGC+CGG 0.441556 8.1:+57014418 MS.gene068987:CDS
TTTAATAACTGGCGGAGCGT+CGG 0.442410 8.1:+57010386 MS.gene068987:CDS
TTCTGGTTTGAATGGTGATT+CGG 0.443044 8.1:-57010343 None:intergenic
TGAAGGGGATGTGAGGAAGC+AGG 0.455697 8.1:+57010539 MS.gene068987:CDS
GCTGAGGATCTTTCGCCGAA+TGG 0.457228 8.1:+57010654 MS.gene068987:CDS
GGAGACACTATGATAGTTGA+TGG 0.460768 8.1:+57014399 MS.gene068987:CDS
ATTCTTGTTAATGCTGCTGC+TGG 0.464854 8.1:+57010615 MS.gene068987:CDS
CTCTTCTTAGCATCAGATGC+AGG 0.469651 8.1:+57012579 MS.gene068987:CDS
GAAATGCCTCTGTATAAACT+TGG 0.470825 8.1:+57012528 MS.gene068987:CDS
TGGAGCGTCGGTTGCTGTGA+TGG 0.472642 8.1:+57010446 MS.gene068987:CDS
TTCCAGCTGTTGGGTTTGAA+GGG 0.474545 8.1:+57010523 MS.gene068987:CDS
CAGTGCCAAGTTTCTTGTAG+TGG 0.474942 8.1:-57012391 None:intergenic
CACTTAAGTATCTCAAGAAA+GGG 0.475461 8.1:+57012037 MS.gene068987:CDS
GCCAAAGGAGGCAGTGAGAC+AGG 0.476361 8.1:+57014452 MS.gene068987:CDS
AGATCCAGAAATGAACCAAT+TGG 0.476611 8.1:+57014495 MS.gene068987:CDS
CAAGAAACTTGGCACTGGAA+TGG 0.477594 8.1:+57012397 MS.gene068987:CDS
GCACTTAAGTATCTCAAGAA+AGG 0.480331 8.1:+57012036 MS.gene068987:CDS
AAATGCCTCTGTATAAACTT+GGG 0.505018 8.1:+57012529 MS.gene068987:CDS
TCCCCTTCAAACCCAACAGC+TGG 0.506137 8.1:-57010525 None:intergenic
CCGCTAGAAGAGTTCCTACC+AGG 0.507529 8.1:-57012063 None:intergenic
ATTATGATATTCGAGTCAAT+GGG 0.519870 8.1:+57012427 MS.gene068987:CDS
TGATAGTTGATGGAGGACTT+TGG 0.521104 8.1:+57014409 MS.gene068987:CDS
CTGGTAGGAACTCTTCTAGC+GGG 0.525188 8.1:+57012064 MS.gene068987:CDS
GGAGCCAGTTTACTCATGCC+AGG 0.525918 8.1:-57012477 None:intergenic
TGATTCCACTACAAGAAACT+TGG 0.526022 8.1:+57012386 MS.gene068987:CDS
CGAGTCAATGGGATTGCACC+AGG 0.526292 8.1:+57012438 MS.gene068987:CDS
TCACCTGTTCGAAACCCATT+CGG 0.526674 8.1:-57010669 None:intergenic
CACTACAAGAAACTTGGCAC+TGG 0.548336 8.1:+57012392 MS.gene068987:CDS
TTGGGTTTGAAGGGGATGTG+AGG 0.552630 8.1:+57010532 MS.gene068987:CDS
CGGTTGCTGTGATGGGTCGT+CGG 0.552646 8.1:+57010454 MS.gene068987:CDS
GGAGCGTCGGTTGCTGTGAT+GGG 0.554476 8.1:+57010447 MS.gene068987:CDS
TTGAAATATCGACACAATTG+GGG 0.555968 8.1:+57010418 MS.gene068987:CDS
TCCAGCTGTTGGGTTTGAAG+GGG 0.555982 8.1:+57010524 MS.gene068987:CDS
TATCTCAAGAAAGGGGCACC+TGG 0.556489 8.1:+57012045 MS.gene068987:CDS
TTCTTGTTAATGCTGCTGCT+GGG 0.557653 8.1:+57010616 MS.gene068987:CDS
GCCACGTTATTTGCCAAAGG+AGG 0.568351 8.1:+57014440 MS.gene068987:CDS
AATACATGTATCTGCAGCAA+AGG 0.578193 8.1:+57012140 MS.gene068987:CDS
GGAGTGTCACTTATTGGACC+TGG 0.583283 8.1:-57012456 None:intergenic
TCGACACAATTGGGGAAACA+TGG 0.586478 8.1:+57010426 MS.gene068987:CDS
CCTGAAGAAATAGGTAGCAG+AGG 0.588385 8.1:+57012498 MS.gene068987:CDS
AGAAACTTGGCACTGGAATG+GGG 0.594972 8.1:+57012399 MS.gene068987:CDS
CCTTTGGCAAATAACGTGGC+CGG 0.597655 8.1:-57014437 None:intergenic
CCGGCCACGTTATTTGCCAA+AGG 0.598200 8.1:+57014437 MS.gene068987:CDS
TCAAGAAAGGGGCACCTGGT+AGG 0.602664 8.1:+57012049 MS.gene068987:CDS
AATGCCTCTGTATAAACTTG+GGG 0.607132 8.1:+57012530 MS.gene068987:CDS
CCAAGAAGCTCCATAATGCA+AGG 0.608499 8.1:-57012112 None:intergenic
TGTGAGGAAGCAGGAAGATG+CGG 0.618720 8.1:+57010548 MS.gene068987:CDS
TTCTCCCCAAGTTTATACAG+AGG 0.622115 8.1:-57012534 None:intergenic
TGGTAGGAACTCTTCTAGCG+GGG 0.631175 8.1:+57012065 MS.gene068987:CDS
ATTGGGGAAACATGGAGCGT+CGG 0.632251 8.1:+57010434 MS.gene068987:CDS
GCCTCCTTTGGCAAATAACG+TGG 0.635341 8.1:-57014441 None:intergenic
GGTCCAATAAGTGACACTCC+TGG 0.636505 8.1:+57012459 MS.gene068987:CDS
GGAGAAATGGGATATTGCAA+TGG 0.644314 8.1:+57012551 MS.gene068987:CDS
CCTGGTAGGAACTCTTCTAG+CGG 0.661737 8.1:+57012063 MS.gene068987:CDS
GGTAGGAACTCTTCTAGCGG+GGG 0.665696 8.1:+57012066 MS.gene068987:CDS
GTGTTGGATATCGATTCTGT+TGG 0.666144 8.1:+57011991 MS.gene068987:intron
AAAGTAGCTTTAATAACTGG+CGG 0.668949 8.1:+57010378 MS.gene068987:CDS
ACTTAAGTATCTCAAGAAAG+GGG 0.678718 8.1:+57012038 MS.gene068987:CDS
GACACTATGATAGTTGATGG+AGG 0.683950 8.1:+57014402 MS.gene068987:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAACTTAAAAAAAAAAA+AGG - chr8.1:57011061-57011080 None:intergenic 10.0%
!!! ATTTTCATCTTTTTAATTTA+AGG + chr8.1:57012188-57012207 MS.gene068987:intron 10.0%
!!! ATTTTTTATTTATTTGTCTA+TGG + chr8.1:57014334-57014353 MS.gene068987:intron 10.0%
!!! TAAAATTTTAATTATTCAAC+AGG + chr8.1:57012356-57012375 MS.gene068987:intron 10.0%
!!! TTTTTAATTTAAGGATTTAA+AGG + chr8.1:57012197-57012216 MS.gene068987:intron 10.0%
!! AAGCTTAAATTAAGTTTAAT+GGG - chr8.1:57012337-57012356 None:intergenic 15.0%
!! AATTTATATTTGTGGTATAA+GGG - chr8.1:57012932-57012951 None:intergenic 15.0%
!! ACAAGATATTATGTAATTAT+AGG + chr8.1:57012861-57012880 MS.gene068987:intron 15.0%
!! CAAGATATTATGTAATTATA+GGG + chr8.1:57012862-57012881 MS.gene068987:intron 15.0%
!! TAAAACAAATAATGCATAAA+AGG - chr8.1:57012897-57012916 None:intergenic 15.0%
!! TAAGCTTAAATTAAGTTTAA+TGG - chr8.1:57012338-57012357 None:intergenic 15.0%
!!! AATGATTTTGCAATAATTTA+CGG - chr8.1:57011697-57011716 None:intergenic 15.0%
!!! ATATGTAGATTTTAAAATCA+AGG - chr8.1:57011482-57011501 None:intergenic 15.0%
!!! GCAAAATAATATATTTTCAT+TGG - chr8.1:57012261-57012280 None:intergenic 15.0%
!!! TAATAAATCTAGAATACATA+AGG - chr8.1:57014061-57014080 None:intergenic 15.0%
!!! TTTATGCATTATTTGTTTTA+TGG + chr8.1:57012897-57012916 MS.gene068987:intron 15.0%
!! AAACATTATAAACACTACAT+AGG + chr8.1:57013830-57013849 MS.gene068987:intron 20.0%
!! AAAGATGAAAATTAACATCT+AGG - chr8.1:57012180-57012199 None:intergenic 20.0%
!! AATACATTTCTTAGAAATCA+AGG - chr8.1:57010982-57011001 None:intergenic 20.0%
!! ATTCAATTAACGTATGTATT+TGG + chr8.1:57010763-57010782 MS.gene068987:intron 20.0%
!! ATTTGAATTGCATAAAATCA+TGG + chr8.1:57011509-57011528 MS.gene068987:intron 20.0%
!! CAATTTATATTTGTGGTATA+AGG - chr8.1:57012933-57012952 None:intergenic 20.0%
!! GAATCTAAAAAGTAAAATTG+AGG - chr8.1:57010747-57010766 None:intergenic 20.0%
!! TATACCACAAATATAAATTG+TGG + chr8.1:57012933-57012952 MS.gene068987:intron 20.0%
!! TATTGCAAAATTATGCAAAA+TGG - chr8.1:57012979-57012998 None:intergenic 20.0%
!! TTAAATAAAACATACGATCA+GGG - chr8.1:57013214-57013233 None:intergenic 20.0%
!! TTTAAATAAAACATACGATC+AGG - chr8.1:57013215-57013234 None:intergenic 20.0%
!!! AAAAACAAAAGGTAAAGTTT+TGG - chr8.1:57013989-57014008 None:intergenic 20.0%
!!! AAAACAAAAGGTAAAGTTTT+GGG - chr8.1:57013988-57014007 None:intergenic 20.0%
!!! AAATTGTACAACTTTTTGAA+TGG - chr8.1:57011638-57011657 None:intergenic 20.0%
!!! ATAAATTTTGTAAGGTTGTT+TGG + chr8.1:57011190-57011209 MS.gene068987:intron 20.0%
!!! ATGTAGTGTTTATAATGTTT+TGG - chr8.1:57013830-57013849 None:intergenic 20.0%
!!! ATTTGACTTTTAAGCATTTT+GGG + chr8.1:57010583-57010602 MS.gene068987:CDS 20.0%
!!! CTACTATCATAAATTTTGTA+AGG + chr8.1:57011182-57011201 MS.gene068987:intron 20.0%
!!! TAAATTTTGTAAGGTTGTTT+GGG + chr8.1:57011191-57011210 MS.gene068987:intron 20.0%
!!! TCATTATTTTTTTGACATGT+TGG + chr8.1:57013059-57013078 MS.gene068987:intron 20.0%
!!! TGATAAAAACAAATTTTGCA+AGG + chr8.1:57014104-57014123 MS.gene068987:intron 20.0%
! AACATCGTTTAAATTTGTGA+AGG + chr8.1:57014363-57014382 MS.gene068987:intron 25.0%
! AAGTTATGAAAATGTTTCCA+AGG - chr8.1:57012693-57012712 None:intergenic 25.0%
! ACTTACTTAACCGTTTAAAA+AGG - chr8.1:57011086-57011105 None:intergenic 25.0%
! AGATGTATAAACTATGAGAA+GGG - chr8.1:57013289-57013308 None:intergenic 25.0%
! AGTATTCAGTGAGTAAAAAT+GGG - chr8.1:57014240-57014259 None:intergenic 25.0%
! ATGATAGCAATGATGAAATA+AGG - chr8.1:57014155-57014174 None:intergenic 25.0%
! ATTATGATATTCGAGTCAAT+GGG + chr8.1:57012427-57012446 MS.gene068987:CDS 25.0%
! ATTTCTTAGAAATCAAGGTT+GGG - chr8.1:57010977-57010996 None:intergenic 25.0%
! CATCAAATAGCTAATGTATA+TGG - chr8.1:57010802-57010821 None:intergenic 25.0%
! CATGATTAATTAGTAGTGTT+CGG + chr8.1:57012748-57012767 MS.gene068987:intron 25.0%
! CTAAAAAGTAAAATTGAGGA+CGG - chr8.1:57010743-57010762 None:intergenic 25.0%
! GAGTAGGAAAAAAAAACAAA+AGG - chr8.1:57014000-57014019 None:intergenic 25.0%
! GGTTAATTAAGTTCAATTGA+TGG + chr8.1:57011530-57011549 MS.gene068987:intron 25.0%
! GTTAATCATGTTTAAATCTG+TGG - chr8.1:57011460-57011479 None:intergenic 25.0%
! TAGTATTCAGTGAGTAAAAA+TGG - chr8.1:57014241-57014260 None:intergenic 25.0%
! TGTAAATTAGATAAGAGTCT+TGG - chr8.1:57011890-57011909 None:intergenic 25.0%
! TGTGAAGGAAAATACATTAA+CGG + chr8.1:57014378-57014397 MS.gene068987:intron 25.0%
! TTAACTCAATCTTACAAAAC+CGG + chr8.1:57013786-57013805 MS.gene068987:intron 25.0%
! TTATGTAATTATAGGGAAGT+AGG + chr8.1:57012869-57012888 MS.gene068987:intron 25.0%
! TTCAAACCAGAAATCTTAAA+AGG + chr8.1:57010354-57010373 MS.gene068987:CDS 25.0%
!! AACTTTTTGAATGGTTAACA+CGG - chr8.1:57011629-57011648 None:intergenic 25.0%
!! AGTATAAATCAGTTTTACAC+TGG + chr8.1:57012232-57012251 MS.gene068987:intron 25.0%
!! ATGCTATTTGAACATCTATT+TGG - chr8.1:57011667-57011686 None:intergenic 25.0%
!! CATTTCTCGTATTCAATTTT+AGG - chr8.1:57011940-57011959 None:intergenic 25.0%
!! TAAAAACAAATTTTGCAAGG+TGG + chr8.1:57014107-57014126 MS.gene068987:intron 25.0%
!! TATAAGTTTTTATCCAAGCA+GGG + chr8.1:57011387-57011406 MS.gene068987:intron 25.0%
!! TCATCACAAATACTCTATTT+TGG + chr8.1:57013617-57013636 MS.gene068987:intron 25.0%
!! TTATAAGTTTTTATCCAAGC+AGG + chr8.1:57011386-57011405 MS.gene068987:intron 25.0%
!! TTTGAAATATCGACACAATT+GGG + chr8.1:57010417-57010436 MS.gene068987:CDS 25.0%
!!! AAAGTGAAAAGGTTATTTCT+AGG - chr8.1:57013723-57013742 None:intergenic 25.0%
!!! AGCTTTGGTTAATAGATTTT+GGG + chr8.1:57011130-57011149 MS.gene068987:intron 25.0%
!!! AGTTGTTTAGCCTTTTTAAA+CGG + chr8.1:57011073-57011092 MS.gene068987:intron 25.0%
!!! CTGTAAATGTTGTATTTTTG+TGG + chr8.1:57012653-57012672 MS.gene068987:intron 25.0%
!!! GATTTGACTTTTAAGCATTT+TGG + chr8.1:57010582-57010601 MS.gene068987:CDS 25.0%
!!! GCTCTAACAAAATTTTAACA+AGG - chr8.1:57013766-57013785 None:intergenic 25.0%
!!! TTATTTCTAGGTGATCTAAA+TGG - chr8.1:57013711-57013730 None:intergenic 25.0%
!!! TTTAAGATTTCTGGTTTGAA+TGG - chr8.1:57010354-57010373 None:intergenic 25.0%
AAATGCCTCTGTATAAACTT+GGG + chr8.1:57012529-57012548 MS.gene068987:CDS 30.0%
ACAAAGACAGTAAAGTGAAA+AGG - chr8.1:57013734-57013753 None:intergenic 30.0%
ACATGACTTAGTTGAATGAA+GGG - chr8.1:57013406-57013425 None:intergenic 30.0%
ACTTAAGTATCTCAAGAAAG+GGG + chr8.1:57012038-57012057 MS.gene068987:CDS 30.0%
AGCTTACGAAAACAACTTAT+AGG + chr8.1:57011285-57011304 MS.gene068987:intron 30.0%
ATACATAAGGCTTCAAAGTT+TGG - chr8.1:57014048-57014067 None:intergenic 30.0%
ATCAGAATCCTTCTATAATG+TGG + chr8.1:57011831-57011850 MS.gene068987:intron 30.0%
ATTAATTAGTAGTGTTCGGT+TGG + chr8.1:57012752-57012771 MS.gene068987:intron 30.0%
CACTTAAGTATCTCAAGAAA+GGG + chr8.1:57012037-57012056 MS.gene068987:CDS 30.0%
CATTTCTTAGAAATCAAGGT+TGG - chr8.1:57010978-57010997 None:intergenic 30.0%
GACACCACAATTTATATTTG+TGG - chr8.1:57012940-57012959 None:intergenic 30.0%
GAGATGTATAAACTATGAGA+AGG - chr8.1:57013290-57013309 None:intergenic 30.0%
GATTATGATATTCGAGTCAA+TGG + chr8.1:57012426-57012445 MS.gene068987:CDS 30.0%
TAAATGGTCATATACATGAG+AGG - chr8.1:57013695-57013714 None:intergenic 30.0%
TATATTTGTGGTATAAGGGT+AGG - chr8.1:57012928-57012947 None:intergenic 30.0%
TATTAAAGAGTGGAAGACAA+AGG - chr8.1:57013530-57013549 None:intergenic 30.0%
TGCAATACGTATTTAAACCT+TGG + chr8.1:57012992-57013011 MS.gene068987:intron 30.0%
TTAATTAGTAGTGTTCGGTT+GGG + chr8.1:57012753-57012772 MS.gene068987:intron 30.0%
TTCATTATTGTTTGCAGTGT+TGG + chr8.1:57011975-57011994 MS.gene068987:intron 30.0%
TTGAAATATCGACACAATTG+GGG + chr8.1:57010418-57010437 MS.gene068987:CDS 30.0%
TTGAATAAGTGTCTATACGT+GGG + chr8.1:57010907-57010926 MS.gene068987:intron 30.0%
TTGCAATTTCGATGCATTTA+GGG + chr8.1:57011001-57011020 MS.gene068987:intron 30.0%
TTTGAATAAGTGTCTATACG+TGG + chr8.1:57010906-57010925 MS.gene068987:intron 30.0%
TTTGCAATTTCGATGCATTT+AGG + chr8.1:57011000-57011019 MS.gene068987:intron 30.0%
! GTAGTGAAACTAGAAAGTAT+AGG + chr8.1:57012835-57012854 MS.gene068987:intron 30.0%
! GTTTGAAATATCGACACAAT+TGG + chr8.1:57010416-57010435 MS.gene068987:CDS 30.0%
! TTGGGAAGATATAAAAGTGT+TGG - chr8.1:57013970-57013989 None:intergenic 30.0%
! TTTTTGCTTGTAATTGAGAC+TGG + chr8.1:57010837-57010856 MS.gene068987:intron 30.0%
!! AAAGTAGCTTTAATAACTGG+CGG + chr8.1:57010378-57010397 MS.gene068987:CDS 30.0%
!! AATGAAGGGTATTGCAATAT+GGG - chr8.1:57013392-57013411 None:intergenic 30.0%
!! CAGCTTTGGTTAATAGATTT+TGG + chr8.1:57011129-57011148 MS.gene068987:intron 30.0%
!! GTTATGTTTGTTTCTGTTCA+AGG + chr8.1:57013177-57013196 MS.gene068987:intron 30.0%
!! GTTGTTTTCGTAAGCTATAT+AGG - chr8.1:57011281-57011300 None:intergenic 30.0%
!!! ACTTTGCCTTTTAAGATTTC+TGG - chr8.1:57010363-57010382 None:intergenic 30.0%
!!! AGGATTTTTGTTGTTTTCGA+TGG + chr8.1:57010691-57010710 MS.gene068987:intron 30.0%
AAAAGTAAAATTGAGGACGG+AGG - chr8.1:57010740-57010759 None:intergenic 35.0%
AATACATGTATCTGCAGCAA+AGG + chr8.1:57012140-57012159 MS.gene068987:CDS 35.0%
AATGCCTCTGTATAAACTTG+GGG + chr8.1:57012530-57012549 MS.gene068987:CDS 35.0%
ACAAAGGCTCTATAAGAGAA+AGG - chr8.1:57013514-57013533 None:intergenic 35.0%
AGATCCAGAAATGAACCAAT+TGG + chr8.1:57014495-57014514 MS.gene068987:CDS 35.0%
AGCATTTGAAAGTCTATAGC+AGG - chr8.1:57013327-57013346 None:intergenic 35.0%
AGGATACTAAAGACACTATG+TGG - chr8.1:57011041-57011060 None:intergenic 35.0%
ATGAGTCGAGACAATTAAAG+AGG - chr8.1:57013593-57013612 None:intergenic 35.0%
ATTAGTGCTACCTTGCATTA+TGG + chr8.1:57012102-57012121 MS.gene068987:CDS 35.0%
CATAGTTTATACATCTCACC+TGG + chr8.1:57013293-57013312 MS.gene068987:intron 35.0%
CTGAATACTAACCATGTAGT+TGG + chr8.1:57014251-57014270 MS.gene068987:intron 35.0%
GAAATGCCTCTGTATAAACT+TGG + chr8.1:57012528-57012547 MS.gene068987:CDS 35.0%
GACATGACTTAGTTGAATGA+AGG - chr8.1:57013407-57013426 None:intergenic 35.0%
GCACTTAAGTATCTCAAGAA+AGG + chr8.1:57012036-57012055 MS.gene068987:CDS 35.0%
GGATACTAAAGACACTATGT+GGG - chr8.1:57011040-57011059 None:intergenic 35.0%
GTATAAACTTGGGGAGAAAT+GGG + chr8.1:57012539-57012558 MS.gene068987:CDS 35.0%
TCCATTTCAAACCAACTACA+TGG - chr8.1:57014265-57014284 None:intergenic 35.0%
TGATTCCACTACAAGAAACT+TGG + chr8.1:57012386-57012405 MS.gene068987:CDS 35.0%
TGCAATTTCGATGCATTTAG+GGG + chr8.1:57011002-57011021 MS.gene068987:intron 35.0%
TGTATAAACTTGGGGAGAAA+TGG + chr8.1:57012538-57012557 MS.gene068987:CDS 35.0%
TTAACCGTCATCGAGTAATA+TGG - chr8.1:57013560-57013579 None:intergenic 35.0%
! AACACCAATTGGTTCATTTC+TGG - chr8.1:57014502-57014521 None:intergenic 35.0%
! ACAAAGGCTCTTTAAGAGAA+AGG - chr8.1:57013483-57013502 None:intergenic 35.0%
! ACTACTCATCTGAAACACAA+TGG - chr8.1:57011863-57011882 None:intergenic 35.0%
! AGAGAAAGGTTTTCATCAGA+TGG - chr8.1:57013469-57013488 None:intergenic 35.0%
! AGTTCTTCAATCTGCTGTTT+CGG + chr8.1:57010482-57010501 MS.gene068987:CDS 35.0%
! CTAGGGGTATACTATATTGA+AGG + chr8.1:57013936-57013955 MS.gene068987:intron 35.0%
! GGTTTTTGAATTCCATGCTT+GGG + chr8.1:57012783-57012802 MS.gene068987:intron 35.0%
! TGACTTTTAAGCATTTTGGG+AGG + chr8.1:57010586-57010605 MS.gene068987:CDS 35.0%
! TGGTTTTTGAATTCCATGCT+TGG + chr8.1:57012782-57012801 MS.gene068987:intron 35.0%
! TTGGTTAATAGATTTTGGGC+TGG + chr8.1:57011134-57011153 MS.gene068987:intron 35.0%
!! ACCATGTAGTTGGTTTGAAA+TGG + chr8.1:57014261-57014280 MS.gene068987:intron 35.0%
!! CTACTTCTCATTGACTTTGA+AGG - chr8.1:57012716-57012735 None:intergenic 35.0%
!! GAATGAAGGGTATTGCAATA+TGG - chr8.1:57013393-57013412 None:intergenic 35.0%
!! GGCAAAGTAGCTTTAATAAC+TGG + chr8.1:57010375-57010394 MS.gene068987:CDS 35.0%
!! TTCTGGTTTGAATGGTGATT+CGG - chr8.1:57010346-57010365 None:intergenic 35.0%
!!! TAATAGATTTTGGGCTGGTT+TGG + chr8.1:57011139-57011158 MS.gene068987:intron 35.0%
!!! TTGCTTTTTGGAACACCAAT+TGG - chr8.1:57014513-57014532 None:intergenic 35.0%
AGGCTTCAAAGTTTGGTATC+AGG - chr8.1:57014041-57014060 None:intergenic 40.0%
AGTATCGCATATACCAAGCA+GGG - chr8.1:57012635-57012654 None:intergenic 40.0%
ATGGATGTCTTTGTAACCCT+AGG + chr8.1:57014280-57014299 MS.gene068987:intron 40.0%
ATTCTTGTTAATGCTGCTGC+TGG + chr8.1:57010615-57010634 MS.gene068987:CDS 40.0%
CAATAGCGTAGTTCAATGAG+TGG - chr8.1:57011590-57011609 None:intergenic 40.0%
GGAGAAATGGGATATTGCAA+TGG + chr8.1:57012551-57012570 MS.gene068987:CDS 40.0%
GGAGACACTATGATAGTTGA+TGG + chr8.1:57014399-57014418 MS.gene068987:CDS 40.0%
GGTCATTGCCACATTATAGA+AGG - chr8.1:57011842-57011861 None:intergenic 40.0%
GTAGAACTGAAAAGAAGCCA+AGG - chr8.1:57013012-57013031 None:intergenic 40.0%
TATCCAAGCAGGGTCATATT+AGG + chr8.1:57011397-57011416 MS.gene068987:intron 40.0%
TCAGGACATATAGACTGCAA+CGG - chr8.1:57014023-57014042 None:intergenic 40.0%
TGACTCACGTGTAAATGAAG+TGG + chr8.1:57011106-57011125 MS.gene068987:intron 40.0%
TGTAAATGAAGTGGCAGCTT+TGG + chr8.1:57011115-57011134 MS.gene068987:intron 40.0%
TTCACTACCAGAAAGCTAGA+CGG - chr8.1:57012823-57012842 None:intergenic 40.0%
TTCATTGTGTTGGGTGTGAA+GGG - chr8.1:57013889-57013908 None:intergenic 40.0%
TTCTCCCCAAGTTTATACAG+AGG - chr8.1:57012537-57012556 None:intergenic 40.0%
TTCTTGTTAATGCTGCTGCT+GGG + chr8.1:57010616-57010635 MS.gene068987:CDS 40.0%
TTGTCTGTGACAAGTCTCAA+AGG - chr8.1:57011786-57011805 None:intergenic 40.0%
TTTGTGGTATAAGGGTAGGA+AGG - chr8.1:57012924-57012943 None:intergenic 40.0%
! AAACTGGCTCCTGAAGAAAT+AGG + chr8.1:57012489-57012508 MS.gene068987:CDS 40.0%
! AAGAAACTTGGCACTGGAAT+GGG + chr8.1:57012398-57012417 MS.gene068987:CDS 40.0%
! AGTCACTGTTTGAGATACCT+AGG - chr8.1:57014300-57014319 None:intergenic 40.0%
! GAGAAAGGTTTTCACGACAA+AGG - chr8.1:57013499-57013518 None:intergenic 40.0%
! GTCACTGTTTGAGATACCTA+GGG - chr8.1:57014299-57014318 None:intergenic 40.0%
!! AAAGAAGTGCTGATGACATG+TGG - chr8.1:57013433-57013452 None:intergenic 40.0%
!! GACACTATGATAGTTGATGG+AGG + chr8.1:57014402-57014421 MS.gene068987:CDS 40.0%
!! GTGTTGGATATCGATTCTGT+TGG + chr8.1:57011991-57012010 MS.gene068987:intron 40.0%
!! TAACGCAGAGAAGCATTGAA+AGG - chr8.1:57013034-57013053 None:intergenic 40.0%
!! TGATAGTTGATGGAGGACTT+TGG + chr8.1:57014409-57014428 MS.gene068987:CDS 40.0%
ACACCTAATATGACCCTGCT+TGG - chr8.1:57011403-57011422 None:intergenic 45.0%
ACCAAAGCAAAACCCAAGCA+TGG - chr8.1:57012798-57012817 None:intergenic 45.0%
ACCGTCATCGAGTAATATGG+TGG - chr8.1:57013557-57013576 None:intergenic 45.0%
ACGCTATTGCTAACCACATG+CGG + chr8.1:57011601-57011620 MS.gene068987:intron 45.0%
ACTACATAGGCCATGTCTCT+AGG + chr8.1:57013843-57013862 MS.gene068987:intron 45.0%
ATATAGACTGCAACGGGAGT+AGG - chr8.1:57014016-57014035 None:intergenic 45.0%
ATTCCAGCTGTTGGGTTTGA+AGG + chr8.1:57010522-57010541 MS.gene068987:CDS 45.0%
CACTACAAGAAACTTGGCAC+TGG + chr8.1:57012392-57012411 MS.gene068987:CDS 45.0%
CAGGACATATAGACTGCAAC+GGG - chr8.1:57014022-57014041 None:intergenic 45.0%
CAGTATCGCATATACCAAGC+AGG - chr8.1:57012636-57012655 None:intergenic 45.0%
CAGTGCCAAGTTTCTTGTAG+TGG - chr8.1:57012394-57012413 None:intergenic 45.0%
CCAAGAAGCTCCATAATGCA+AGG - chr8.1:57012115-57012134 None:intergenic 45.0%
CCTGAAGAAATAGGTAGCAG+AGG + chr8.1:57012498-57012517 MS.gene068987:CDS 45.0%
CCTTGCATTATGGAGCTTCT+TGG + chr8.1:57012112-57012131 MS.gene068987:CDS 45.0%
CTAACACAACCCCACAAAAC+CGG - chr8.1:57010953-57010972 None:intergenic 45.0%
CTACATCACTCTACTCTCGT+TGG + chr8.1:57012280-57012299 MS.gene068987:intron 45.0%
CTATAGCAGGATTACAGACC+AGG - chr8.1:57013314-57013333 None:intergenic 45.0%
CTCAATCTTACAAAACCGGC+TGG + chr8.1:57013790-57013809 MS.gene068987:intron 45.0%
CTCTTCTTAGCATCAGATGC+AGG + chr8.1:57012579-57012598 MS.gene068987:CDS 45.0%
CTTCACACCCAACACAATGA+AGG + chr8.1:57013888-57013907 MS.gene068987:intron 45.0%
CTTCATTGTGTTGGGTGTGA+AGG - chr8.1:57013890-57013909 None:intergenic 45.0%
GCCACCATATTACTCGATGA+CGG + chr8.1:57013553-57013572 MS.gene068987:intron 45.0%
TATACCAAGCAGGGAACACT+TGG - chr8.1:57012626-57012645 None:intergenic 45.0%
TCACCTGTTCGAAACCCATT+CGG - chr8.1:57010672-57010691 None:intergenic 45.0%
TCATTGTGTTGGGTGTGAAG+GGG - chr8.1:57013888-57013907 None:intergenic 45.0%
TCGACACAATTGGGGAAACA+TGG + chr8.1:57010426-57010445 MS.gene068987:CDS 45.0%
TCTTACAAAACCGGCTGGTA+AGG + chr8.1:57013795-57013814 MS.gene068987:intron 45.0%
TGGGTTGCCTTCATTGTGTT+GGG - chr8.1:57013898-57013917 None:intergenic 45.0%
TGGTGACTATCTGAAAGCCT+TGG + chr8.1:57012673-57012692 MS.gene068987:intron 45.0%
TGGTGGCAGCTATTAAAGAG+TGG - chr8.1:57013540-57013559 None:intergenic 45.0%
TTATCCAAGTGTTCCCTGCT+TGG + chr8.1:57012619-57012638 MS.gene068987:intron 45.0%
TTCCAGCTGTTGGGTTTGAA+GGG + chr8.1:57010523-57010542 MS.gene068987:CDS 45.0%
TTGCTGCAATTAGGTGGCTA+GGG + chr8.1:57013919-57013938 MS.gene068987:intron 45.0%
TTTAATAACTGGCGGAGCGT+CGG + chr8.1:57010386-57010405 MS.gene068987:CDS 45.0%
! AGAAACTTGGCACTGGAATG+GGG + chr8.1:57012399-57012418 MS.gene068987:CDS 45.0%
! CAAGAAACTTGGCACTGGAA+TGG + chr8.1:57012397-57012416 MS.gene068987:CDS 45.0%
! CCTCTGCTACCTATTTCTTC+AGG - chr8.1:57012501-57012520 None:intergenic 45.0%
! GAATTTTCTTGCTGCTGCTG+AGG + chr8.1:57010638-57010657 MS.gene068987:CDS 45.0%
! TCCATGCTTGGGTTTTGCTT+TGG + chr8.1:57012794-57012813 MS.gene068987:intron 45.0%
!! ATGCCAGGAGTGTCACTTAT+TGG - chr8.1:57012465-57012484 None:intergenic 45.0%
!!! GATTTTGGGCTGGTTTGGAT+TGG + chr8.1:57011144-57011163 MS.gene068987:intron 45.0%
AAAACCGGCTGGTAAGGTGA+GGG + chr8.1:57013801-57013820 MS.gene068987:intron 50.0%
AGCCACCTAATTGCAGCAAG+TGG - chr8.1:57013918-57013937 None:intergenic 50.0%
ATTGGGGAAACATGGAGCGT+CGG + chr8.1:57010434-57010453 MS.gene068987:CDS 50.0%
CACTCCTGGCATGAGTAAAC+TGG + chr8.1:57012473-57012492 MS.gene068987:CDS 50.0%
CCTGGTAGGAACTCTTCTAG+CGG + chr8.1:57012063-57012082 MS.gene068987:CDS 50.0%
CCTTTGGCAAATAACGTGGC+CGG - chr8.1:57014440-57014459 None:intergenic 50.0%
CGCTTTCGATTCCAGCTGTT+GGG + chr8.1:57010514-57010533 MS.gene068987:CDS 50.0%
CTGAGGATCTTTCGCCGAAT+GGG + chr8.1:57010655-57010674 MS.gene068987:CDS 50.0%
CTGGTAGGAACTCTTCTAGC+GGG + chr8.1:57012064-57012083 MS.gene068987:CDS 50.0%
CTTGCTGCAATTAGGTGGCT+AGG + chr8.1:57013918-57013937 MS.gene068987:intron 50.0%
GCCACCTAATTGCAGCAAGT+GGG - chr8.1:57013917-57013936 None:intergenic 50.0%
GCCACGTTATTTGCCAAAGG+AGG + chr8.1:57014440-57014459 MS.gene068987:CDS 50.0%
GCCTCCTTTGGCAAATAACG+TGG - chr8.1:57014444-57014463 None:intergenic 50.0%
GGTCCAATAAGTGACACTCC+TGG + chr8.1:57012459-57012478 MS.gene068987:CDS 50.0%
TCCAGCTGTTGGGTTTGAAG+GGG + chr8.1:57010524-57010543 MS.gene068987:CDS 50.0%
TCGCTTTCGATTCCAGCTGT+TGG + chr8.1:57010513-57010532 MS.gene068987:CDS 50.0%
TCTCATGCTGCCTAGAGACA+TGG - chr8.1:57013856-57013875 None:intergenic 50.0%
TGCTGCAATTAGGTGGCTAG+GGG + chr8.1:57013920-57013939 MS.gene068987:intron 50.0%
TGGTAGGAACTCTTCTAGCG+GGG + chr8.1:57012065-57012084 MS.gene068987:CDS 50.0%
TGTGAGGAAGCAGGAAGATG+CGG + chr8.1:57010548-57010567 MS.gene068987:CDS 50.0%
TTGGGTTTGAAGGGGATGTG+AGG + chr8.1:57010532-57010551 MS.gene068987:CDS 50.0%
! ACCCACTTGCTGCAATTAGG+TGG + chr8.1:57013913-57013932 MS.gene068987:intron 50.0%
! GAATGGGTTTCGAACAGGTG+AGG + chr8.1:57010671-57010690 MS.gene068987:intron 50.0%
! GCAACCCACTTGCTGCAATT+AGG + chr8.1:57013910-57013929 MS.gene068987:intron 50.0%
! GTGGGTTGCCTTCATTGTGT+TGG - chr8.1:57013899-57013918 None:intergenic 50.0%
! TTAATAACTGGCGGAGCGTC+GGG + chr8.1:57010387-57010406 MS.gene068987:CDS 50.0%
!! GGAGTGTCACTTATTGGACC+TGG - chr8.1:57012459-57012478 None:intergenic 50.0%
!! TATCTCAAGAAAGGGGCACC+TGG + chr8.1:57012045-57012064 MS.gene068987:CDS 50.0%
!! TTGGTGACCGTCTAGCTTTC+TGG + chr8.1:57012813-57012832 MS.gene068987:intron 50.0%
!!! ACCTCACATGCCGGTTTTGT+GGG + chr8.1:57010940-57010959 MS.gene068987:intron 50.0%
ACCTGTCTCACTGCCTCCTT+TGG - chr8.1:57014456-57014475 None:intergenic 55.0%
AGTGTTCGGTTGGGACTTGC+TGG + chr8.1:57012762-57012781 MS.gene068987:intron 55.0%
ATGGAGGACTTTGGCTGAGC+CGG + chr8.1:57014418-57014437 MS.gene068987:CDS 55.0%
CAAAACCGGCATGTGAGGTG+AGG - chr8.1:57010939-57010958 None:intergenic 55.0%
CAAAACCGGCTGGTAAGGTG+AGG + chr8.1:57013800-57013819 MS.gene068987:intron 55.0%
CCGCTAGAAGAGTTCCTACC+AGG - chr8.1:57012066-57012085 None:intergenic 55.0%
CCGGCCACGTTATTTGCCAA+AGG + chr8.1:57014437-57014456 MS.gene068987:CDS 55.0%
CGAGTCAATGGGATTGCACC+AGG + chr8.1:57012438-57012457 MS.gene068987:CDS 55.0%
GCAATCCTCACCTCACATGC+CGG + chr8.1:57010931-57010950 MS.gene068987:intron 55.0%
GCTGAGGATCTTTCGCCGAA+TGG + chr8.1:57010654-57010673 MS.gene068987:CDS 55.0%
GGAGCCAGTTTACTCATGCC+AGG - chr8.1:57012480-57012499 None:intergenic 55.0%
GGTAGGAACTCTTCTAGCGG+GGG + chr8.1:57012066-57012085 MS.gene068987:CDS 55.0%
GGTTAACACGGTACCGCATG+TGG - chr8.1:57011617-57011636 None:intergenic 55.0%
GTAACCCTCACCTTACCAGC+CGG - chr8.1:57013808-57013827 None:intergenic 55.0%
TCCCCTTCAAACCCAACAGC+TGG - chr8.1:57010528-57010547 None:intergenic 55.0%
TGAAGGGGATGTGAGGAAGC+AGG + chr8.1:57010539-57010558 MS.gene068987:CDS 55.0%
TTGTGTTGGGTGTGAAGGGG+TGG - chr8.1:57013885-57013904 None:intergenic 55.0%
! TCGCCGAATGGGTTTCGAAC+AGG + chr8.1:57010666-57010685 MS.gene068987:CDS 55.0%
!! TCAAGAAAGGGGCACCTGGT+AGG + chr8.1:57012049-57012068 MS.gene068987:CDS 55.0%
!!! CACCTCACATGCCGGTTTTG+TGG + chr8.1:57010939-57010958 MS.gene068987:intron 55.0%
!!! CCTCACATGCCGGTTTTGTG+GGG + chr8.1:57010941-57010960 MS.gene068987:intron 55.0%
CCCCACAAAACCGGCATGTG+AGG - chr8.1:57010944-57010963 None:intergenic 60.0%
GCCAAAGGAGGCAGTGAGAC+AGG + chr8.1:57014452-57014471 MS.gene068987:CDS 60.0%
!! CGGTTGCTGTGATGGGTCGT+CGG + chr8.1:57010454-57010473 MS.gene068987:CDS 60.0%
!! GGAGCGTCGGTTGCTGTGAT+GGG + chr8.1:57010447-57010466 MS.gene068987:CDS 60.0%
!! TGGAGCGTCGGTTGCTGTGA+TGG + chr8.1:57010446-57010465 MS.gene068987:CDS 60.0%
!! ACTGGCGGAGCGTCGGGAAT+TGG + chr8.1:57010393-57010412 MS.gene068987:CDS 65.0%
!! CTGGCGGAGCGTCGGGAATT+GGG + chr8.1:57010394-57010413 MS.gene068987:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 57010330 57014539 57010330 ID=MS.gene068987
chr8.1 mRNA 57010330 57014539 57010330 ID=MS.gene068987.t1;Parent=MS.gene068987
chr8.1 exon 57010330 57010687 57010330 ID=MS.gene068987.t1.exon1;Parent=MS.gene068987.t1
chr8.1 CDS 57010330 57010687 57010330 ID=cds.MS.gene068987.t1;Parent=MS.gene068987.t1
chr8.1 exon 57011992 57012161 57011992 ID=MS.gene068987.t1.exon2;Parent=MS.gene068987.t1
chr8.1 CDS 57011992 57012161 57011992 ID=cds.MS.gene068987.t1;Parent=MS.gene068987.t1
chr8.1 exon 57012378 57012600 57012378 ID=MS.gene068987.t1.exon3;Parent=MS.gene068987.t1
chr8.1 CDS 57012378 57012600 57012378 ID=cds.MS.gene068987.t1;Parent=MS.gene068987.t1
chr8.1 exon 57014385 57014539 57014385 ID=MS.gene068987.t1.exon4;Parent=MS.gene068987.t1
chr8.1 CDS 57014385 57014539 57014385 ID=cds.MS.gene068987.t1;Parent=MS.gene068987.t1
Gene Sequence

>MS.gene068987

ATGGTAGCTTCAACCGAATCACCATTCAAACCAGAAATCTTAAAAGGCAAAGTAGCTTTAATAACTGGCGGAGCGTCGGGAATTGGGTTTGAAATATCGACACAATTGGGGAAACATGGAGCGTCGGTTGCTGTGATGGGTCGTCGGAAGCAAGTTCTTCAATCTGCTGTTTCGGTTCTTCAATCGCTTTCGATTCCAGCTGTTGGGTTTGAAGGGGATGTGAGGAAGCAGGAAGATGCGGCGAGAGTTGTTGATTTGACTTTTAAGCATTTTGGGAGGATTGATATTCTTGTTAATGCTGCTGCTGGGAATTTTCTTGCTGCTGCTGAGGATCTTTCGCCGAATGGGTTTCGAACAGGTGAGGATTTTTGTTGTTTTCGATGGAACAGTTGTATTAAACAATTCTTCCTCCGTCCTCAATTTTACTTTTTAGATTCAATTAACGTATGTATTTGGTCTATATTACAGACCATATACATTAGCTATTTGATGAATCTTAAAAGTGATTTTTTGCTTGTAATTGAGACTGGATAGAGTATGAATATATAGCAAATACATTGTCTATTTAGTAGTTATTTTGAATAAGTGTCTATACGTGGGAGCAATCCTCACCTCACATGCCGGTTTTGTGGGGTTGTGTTAGACCCAACCTTGATTTCTAAGAAATGTATTTGCAATTTCGATGCATTTAGGGGATGACAGAGCGTCCCACATAGTGTCTTTAGTATCCTTTTTTTTTTTTAAGTTGTTTAGCCTTTTTAAACGGTTAAGTAAGTTGACTCACGTGTAAATGAAGTGGCAGCTTTGGTTAATAGATTTTGGGCTGGTTTGGATTGGCTTATTTGAGCTTATCTACTATCATAAATTTTGTAAGGTTGTTTGGGAGAAATTAAGAAACTAACACATGATATGTTCATAAGCTGTTTTCAACTTATTTTCGTTAGTTCTCCTATATAGCTTACGAAAACAACTTATAGGTTATATGAAAACAATTTAAGTTTATTTTATCATGTGCTATAGAAATAGCTTATGCATAAGTGCATATCATAATAAGTGTTATAAGTTTTTATCCAAGCAGGGTCATATTAGGTGTAATGACTTATGTACAATCTACTGAACTTTATCAACCACAGATTTAAACATGATTAACCTTGATTTTAAAATCTACATATCATTTGAATTTGAATTGCATAAAATCATGGTTAATTAAGTTCAATTGATGGATATTGTGTTATCAGATATTGATATATCTACTAACCACTCATTGAACTACGCTATTGCTAACCACATGCGGTACCGTGTTAACCATTCAAAAAGTTGTACAATTTTCTTATCCAAATAGATGTTCAAATAGCATTTCTGTTCCGTAAATTATTGCAAAATCATTTATAGAATTTTCACTAACTCGTTCTACACGAGTACATTTAAAATTTAAAATATGTGTATGATCATTCCTTTGAGACTTGTCACAGACAAAATTTTCATAACATTGCTCATAGAAATCAGAATCCTTCTATAATGTGGCAATGACCATTGTGTTTCAGATGAGTAGTTATTCCAAGACTCTTATCTAATTTACAATTTCTCTTAACAAGATGCAACTTTATCCTAAAATTGAATACGAGAAATGAATTGATGATCAATTTTCATTATTGTTTGCAGTGTTGGATATCGATTCTGTTGGCACATTCACTATGTGTCATGAAGCACTTAAGTATCTCAAGAAAGGGGCACCTGGTAGGAACTCTTCTAGCGGGGGATTAATAATAAACATTAGTGCTACCTTGCATTATGGAGCTTCTTGGTATCAAATACATGTATCTGCAGCAAAGGTTTGAAACACAGTACCTAGATGTTAATTTTCATCTTTTTAATTTAAGGATTTAAAGGTTATGCACTATCAGTATAAATCAGTTTTACACTGGCATCCAATGAAAATATATTATTTTGCTACATCACTCTACTCTCGTTGGATGCGAGTTTAAATTTGATTTATAGTGCATGCCCATTAAACTTAATTTAAGCTTAAAATTTTAATTATTCAACAGGCAGCTGTTGATTCCACTACAAGAAACTTGGCACTGGAATGGGGAACAGATTATGATATTCGAGTCAATGGGATTGCACCAGGTCCAATAAGTGACACTCCTGGCATGAGTAAACTGGCTCCTGAAGAAATAGGTAGCAGAGGCAGAGATGAAATGCCTCTGTATAAACTTGGGGAGAAATGGGATATTGCAATGGCTGCTCTCTTCTTAGCATCAGATGCAGGTTAGTAACTTTGTGCAGTTATCCAAGTGTTCCCTGCTTGGTATATGCGATACTGTAAATGTTGTATTTTTGTGGTGACTATCTGAAAGCCTTGGAAACATTTTCATAACTTCCTTCAAAGTCAATGAGAAGTAGTTAGATTTCTTGCATGATTAATTAGTAGTGTTCGGTTGGGACTTGCTGGTTTTTGAATTCCATGCTTGGGTTTTGCTTTGGTGACCGTCTAGCTTTCTGGTAGTGAAACTAGAAAGTATAGGTTCACAAGATATTATGTAATTATAGGGAAGTAGGCTCCTTTTATGCATTATTTGTTTTATGGTCCTTCCTACCCTTATACCACAAATATAAATTGTGGTGTCTTTAGACAAAATGTATCCATTTTGCATAATTTTGCAATACGTATTTAAACCTTGGCTTCTTTTCAGTTCTACCTTTCAATGCTTCTCTGCGTTAATTTTTCATTATTTTTTTGACATGTTGGTTTTAAATTGTTACAAAACATCAATATTTGATTTTAGAAACATTTTATATATATTATTTTTCGTGTAAAAAACACTTGTGTGATGTCTCTCTAATGTTATGTTTGTTTCTGTTCAAGGAATACTCGTGACCCTGATCGTATGTTTTATTTAAATTATAACTCTTCTATCTTTTTCAGTGTCGTCTTATTTTGTCTGATACTTTTCCCTTCTCATAGTTTATACATCTCACCTGGTCTGTAATCCTGCTATAGACTTTCAAATGCTTTTGCTTTATCATTACTTAATAATTTATCAATGTCTTTTTTACCCATATTGCAATACCCTTCATTCAACTAAGTCATGTCACTCCACATGTCATCAGCACTTCTTTAGATCTCTCAAAACCATCTGATGAAAACCTTTCTCTTAAAGAGCCTTTGTCGTGAAAACCTTTCTCTTATAGAGCCTTTGTCTTCCACTCTTTAATAGCTGCCACCATATTACTCGATGACGGTTAACTTGAGTATTCCTCTTTAATTGTCTCGACTCATGCATTCATCACAAATACTCTATTTTGGATTGTTAGACTCTCTTCTTGTTACACTTCATGCAATGTTTTTTATTCAATTTCCTCTCATGTATATGACCATTTAGATCACCTAGAAATAACCTTTTCACTTTACTGTCTTTGTTCGACAAAACCTTGTTAAAATTTTGTTAGAGCTTAACTCAATCTTACAAAACCGGCTGGTAAGGTGAGGGTTACCAAAACATTATAAACACTACATAGGCCATGTCTCTAGGCAGCATGAGACTAAATCCACCCCTTCACACCCAACACAATGAAGGCAACCCACTTGCTGCAATTAGGTGGCTAGGGGTATACTATATTGAAGGTTGAATTTCCAACACTTTTATATCTTCCCAAAACTTTACCTTTTGTTTTTTTTTCCTACTCCCGTTGCAGTCTATATGTCCTGATACCAAACTTTGAAGCCTTATGTATTCTAGATTTATTAGTCTTTTGTAAACTTTCACATGTTGATAAAAACAAATTTTGCAAGGTGGTTCGTTAATGTTATTTTCATATCCTTATTTCATCATTGCTATCATATAATTATCATATTTGTTAGTCTTTGTTTTGAAATGTAGATTGTTAGTCTTTGTTTCTCTATCCCATTTTTACTCACTGAATACTAACCATGTAGTTGGTTTGAAATGGATGTCTTTGTAACCCTAGGTATCTCAAACAGTGACTATTTTATTCCTTTAATTTTTTATTTATTTGTCTATGGAAACTTAACATCGTTTAAATTTGTGAAGGAAAATACATTAACGGAGACACTATGATAGTTGATGGAGGACTTTGGCTGAGCCGGCCACGTTATTTGCCAAAGGAGGCAGTGAGACAGGTATCACGAGAAGTAGAAAAAAGATCCAGAAATGAACCAATTGGTGTTCCAAAAAGCAAGCTATGA

Protein sequence

>MS.gene068987.t1

MVASTESPFKPEILKGKVALITGGASGIGFEISTQLGKHGASVAVMGRRKQVLQSAVSVLQSLSIPAVGFEGDVRKQEDAARVVDLTFKHFGRIDILVNAAAGNFLAAAEDLSPNGFRTVLDIDSVGTFTMCHEALKYLKKGAPGRNSSSGGLIINISATLHYGASWYQIHVSAAKAAVDSTTRNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPEEIGSRGRDEMPLYKLGEKWDIAMAALFLASDAGKYINGDTMIVDGGLWLSRPRYLPKEAVRQVSREVEKRSRNEPIGVPKSKL