Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59336.t1 | XP_003611940.1 | 96.8 | 655 | 13 | 1 | 1 | 647 | 1 | 655 | 0.00E+00 | 1276.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59336.t1 | F4JQH3 | 69.4 | 657 | 177 | 4 | 1 | 647 | 1 | 643 | 6.4e-271 | 934.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59336.t1 | G7KC66 | 96.8 | 655 | 13 | 1 | 1 | 647 | 1 | 655 | 0.0e+00 | 1276.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene59336 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene59336 | 0.804733 | 1.88E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene59336 | 0.81581 | 7.64E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene59336 | 0.802274 | 6.06E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene59336 | 0.813079 | 3.07E-51 | -1.69E-46 |
| MS.gene050119 | MS.gene59336 | 0.808449 | 3.08E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene59336 | 0.811443 | 6.98E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene59336 | 0.834414 | 3.04E-56 | -1.69E-46 |
| MS.gene050561 | MS.gene59336 | 0.832724 | 8.03E-56 | -1.69E-46 |
| MS.gene050562 | MS.gene59336 | 0.823453 | 1.37E-53 | -1.69E-46 |
| MS.gene050605 | MS.gene59336 | 0.806068 | 9.84E-50 | -1.69E-46 |
| MS.gene050680 | MS.gene59336 | 0.801112 | 1.05E-48 | -1.69E-46 |
| MS.gene051198 | MS.gene59336 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene59336 | 0.811172 | 8.00E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene59336 | 0.829424 | 5.19E-55 | -1.69E-46 |
| MS.gene051859 | MS.gene59336 | 0.831931 | 1.26E-55 | -1.69E-46 |
| MS.gene052239 | MS.gene59336 | -0.805911 | 1.06E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene59336 | 0.821984 | 3.02E-53 | -1.69E-46 |
| MS.gene052500 | MS.gene59336 | 0.803094 | 4.11E-49 | -1.69E-46 |
| MS.gene052502 | MS.gene59336 | 0.804922 | 1.71E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene59336 | 0.810273 | 1.25E-50 | -1.69E-46 |
| MS.gene052826 | MS.gene59336 | 0.805346 | 1.40E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene59336 | 0.810609 | 1.06E-50 | -1.69E-46 |
| MS.gene053006 | MS.gene59336 | 0.804818 | 1.80E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene59336 | 0.800953 | 1.13E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene59336 | 0.813795 | 2.14E-51 | -1.69E-46 |
| MS.gene053998 | MS.gene59336 | 0.81469 | 1.36E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene59336 | 0.807166 | 5.77E-50 | -1.69E-46 |
| MS.gene055367 | MS.gene59336 | 0.801406 | 9.14E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene59336 | 0.815588 | 8.56E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene59336 | 0.878088 | 3.72E-69 | -1.69E-46 |
| MS.gene057026 | MS.gene59336 | 0.802227 | 6.20E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene59336 | 0.800434 | 1.44E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene59336 | 0.827845 | 1.25E-54 | -1.69E-46 |
| MS.gene057869 | MS.gene59336 | 0.807049 | 6.11E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene59336 | 0.811854 | 5.69E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene59336 | 0.834457 | 2.96E-56 | -1.69E-46 |
| MS.gene059161 | MS.gene59336 | 0.814196 | 1.74E-51 | -1.69E-46 |
| MS.gene059550 | MS.gene59336 | 0.801701 | 7.95E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene59336 | 0.83695 | 6.93E-57 | -1.69E-46 |
| MS.gene060167 | MS.gene59336 | 0.834317 | 3.21E-56 | -1.69E-46 |
| MS.gene060310 | MS.gene59336 | 0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene59336 | 0.812078 | 5.08E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene59336 | 0.811969 | 5.36E-51 | -1.69E-46 |
| MS.gene060840 | MS.gene59336 | 0.823361 | 1.44E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064542 | MS.gene59336 | PPI |
| MS.gene59336 | MS.gene072472 | PPI |
| MS.gene59336 | MS.gene73119 | PPI |
| MS.gene050876 | MS.gene59336 | PPI |
| MS.gene035805 | MS.gene59336 | PPI |
| MS.gene066565 | MS.gene59336 | PPI |
| MS.gene29338 | MS.gene59336 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59336.t1 | MTR_5g019600 | 96.794 | 655 | 13 | 1 | 1 | 647 | 1 | 655 | 0.0 | 1310 |
| MS.gene59336.t1 | MTR_5g019600 | 95.852 | 458 | 11 | 1 | 1 | 450 | 1 | 458 | 0.0 | 892 |
| MS.gene59336.t1 | MTR_7g113480 | 42.727 | 660 | 323 | 11 | 5 | 645 | 85 | 708 | 2.24e-171 | 506 |
| MS.gene59336.t1 | MTR_7g113480 | 42.904 | 613 | 295 | 11 | 5 | 598 | 85 | 661 | 1.18e-156 | 467 |
| MS.gene59336.t1 | MTR_7g113480 | 43.127 | 582 | 276 | 11 | 5 | 567 | 85 | 630 | 1.52e-147 | 443 |
| MS.gene59336.t1 | MTR_7g113480 | 42.483 | 572 | 284 | 9 | 83 | 645 | 9 | 544 | 9.51e-147 | 437 |
| MS.gene59336.t1 | MTR_7g113480 | 43.407 | 546 | 264 | 9 | 109 | 645 | 22 | 531 | 8.39e-141 | 421 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59336.t1 | AT4G36760 | 69.559 | 657 | 176 | 5 | 1 | 647 | 1 | 643 | 0.0 | 958 |
| MS.gene59336.t1 | AT4G36760 | 69.360 | 656 | 177 | 5 | 1 | 646 | 1 | 642 | 0.0 | 955 |
| MS.gene59336.t1 | AT4G36760 | 69.572 | 654 | 175 | 5 | 1 | 644 | 1 | 640 | 0.0 | 955 |
| MS.gene59336.t1 | AT3G05350 | 42.729 | 667 | 320 | 12 | 3 | 646 | 81 | 708 | 9.41e-178 | 522 |
Find 133 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAAGTGTAGAGATATTT+TGG | 0.152849 | 5.4:-11907401 | MS.gene59336:CDS |
| TTTACCATTTACACTCTTAT+TGG | 0.154825 | 5.4:+11910828 | None:intergenic |
| GGCTCTTCCAAAAGCTTTAA+AGG | 0.165533 | 5.4:-11910692 | MS.gene59336:intron |
| ATTACACGAACCGTTCATTT+TGG | 0.170433 | 5.4:-11908650 | MS.gene59336:CDS |
| GCTGATACAAAATTTAATTT+TGG | 0.176323 | 5.4:-11907672 | MS.gene59336:CDS |
| GGTCCAAACAACTAAGAATT+TGG | 0.214787 | 5.4:-11911853 | MS.gene59336:CDS |
| GAGCGACCAGCAAACTTTAA+TGG | 0.223509 | 5.4:+11911774 | None:intergenic |
| TCTTGTTTGGCTGGATAATA+AGG | 0.224940 | 5.4:-11910297 | MS.gene59336:intron |
| TCAATCAACTTTGTTTGATA+TGG | 0.227519 | 5.4:+11907472 | None:intergenic |
| GTGCAGATGCAAGATATTTA+TGG | 0.252522 | 5.4:-11910133 | MS.gene59336:intron |
| AAGCGTCGTGCATTTGTTTC+TGG | 0.263725 | 5.4:-11913894 | MS.gene59336:CDS |
| ACCCCAATTGCTGCATCTTT+TGG | 0.266572 | 5.4:+11911948 | None:intergenic |
| GATACAACCTTTAAAGCTTT+TGG | 0.273131 | 5.4:+11910685 | None:intergenic |
| TACTATGAGGATGGAGCATT+TGG | 0.273192 | 5.4:-11907729 | MS.gene59336:CDS |
| ATTTGTTCCATTAGGAAATC+TGG | 0.276108 | 5.4:+11908331 | None:intergenic |
| GAAACCAATAAGAGTGTAAA+TGG | 0.288012 | 5.4:-11910832 | MS.gene59336:CDS |
| AGAATTTGGTTGATGAAGTA+TGG | 0.294148 | 5.4:-11911839 | MS.gene59336:CDS |
| CAACCAAATTCTTAGTTGTT+TGG | 0.305808 | 5.4:+11911850 | None:intergenic |
| CCAGGTTAAAACTCATTTAG+AGG | 0.309613 | 5.4:-11910986 | MS.gene59336:intron |
| CACATAAATGAAGGCAGAAT+TGG | 0.317466 | 5.4:+11911446 | None:intergenic |
| TAATGAATAATAGCTGCATT+TGG | 0.348101 | 5.4:+11908876 | None:intergenic |
| CTTCTGGATTTAGAAGGTTC+AGG | 0.349912 | 5.4:+11907449 | None:intergenic |
| CTAAAAGGTCACATTGCTTT+GGG | 0.351113 | 5.4:-11908359 | MS.gene59336:CDS |
| TGCTGCAAGACAACTGCATC+AGG | 0.354118 | 5.4:+11910724 | None:intergenic |
| AAAAGAGTAGCAACCTCATA+TGG | 0.356024 | 5.4:-11910792 | MS.gene59336:CDS |
| AAGATCCTGCTGTAGATATC+TGG | 0.357561 | 5.4:-11912466 | MS.gene59336:CDS |
| GTAATACCATTTGTTCCATT+AGG | 0.358872 | 5.4:+11908323 | None:intergenic |
| CTTGTAGAACCCAGTGGAAT+TGG | 0.359955 | 5.4:-11910369 | MS.gene59336:intron |
| TTGCCAAAAGATGCAGCAAT+TGG | 0.359971 | 5.4:-11911951 | MS.gene59336:CDS |
| CTGTTGTGCAATATCTTGTT+TGG | 0.362186 | 5.4:-11910310 | MS.gene59336:CDS |
| ATGGAACCGGTCACGGTATT+GGG | 0.364463 | 5.4:-11908136 | MS.gene59336:CDS |
| CAAGATATTTATGGAGCATC+TGG | 0.369771 | 5.4:-11910124 | MS.gene59336:CDS |
| AACTTGGTGCAGGTCCTAAA+AGG | 0.377166 | 5.4:-11908374 | MS.gene59336:intron |
| CCTAAAAGGTCACATTGCTT+TGG | 0.378868 | 5.4:-11908360 | MS.gene59336:CDS |
| CGAATTCCTTTGTGGAACTT+TGG | 0.381686 | 5.4:-11908173 | MS.gene59336:CDS |
| GGAAATGCCAGATTTCCTAA+TGG | 0.381839 | 5.4:-11908338 | MS.gene59336:CDS |
| TTCTTTCTCGAATTCCTTTG+TGG | 0.385407 | 5.4:-11908181 | MS.gene59336:CDS |
| CTATACCTTCATGGACATTC+AGG | 0.387469 | 5.4:+11908108 | None:intergenic |
| ACTAGCCTTGACAGTAGATA+TGG | 0.388692 | 5.4:+11910888 | None:intergenic |
| GTACAACCATTAAAGTTTGC+TGG | 0.395160 | 5.4:-11911780 | MS.gene59336:CDS |
| CATGGAACCGGTCACGGTAT+TGG | 0.397688 | 5.4:-11908137 | MS.gene59336:CDS |
| AACTGCATCAGGGTTCAGTT+TGG | 0.400775 | 5.4:+11910735 | None:intergenic |
| ATCTCTACACTTGGAATGAT+AGG | 0.403975 | 5.4:+11907408 | None:intergenic |
| TGGAGCATTTGGGATAAGAT+TGG | 0.408521 | 5.4:-11907718 | MS.gene59336:CDS |
| CAATTCTGCCTTCATTTATG+TGG | 0.409103 | 5.4:-11911445 | MS.gene59336:CDS |
| AATGAATAATAGCTGCATTT+GGG | 0.420593 | 5.4:+11908877 | None:intergenic |
| TGCCAAAAGATGCAGCAATT+GGG | 0.422496 | 5.4:-11911950 | MS.gene59336:CDS |
| ATAGTTAAACTATACCTTCA+TGG | 0.424811 | 5.4:+11908099 | None:intergenic |
| CAATTGATACTGCTCAAAGA+TGG | 0.432499 | 5.4:-11911908 | MS.gene59336:CDS |
| GGTTAAGAAAAGCCCATGTT+CGG | 0.439198 | 5.4:-11910343 | MS.gene59336:CDS |
| AGTCACCTCAGTCAATTTCA+AGG | 0.442633 | 5.4:+11909493 | None:intergenic |
| TGTGCAATATCTTGTTTGGC+TGG | 0.445934 | 5.4:-11910306 | MS.gene59336:CDS |
| CTTAACCCATCCAATTCCAC+TGG | 0.448404 | 5.4:+11910359 | None:intergenic |
| GTGTGTTTGTAGTATCTAGA+TGG | 0.449399 | 5.4:-11908683 | MS.gene59336:intron |
| GGGCCTACTGAGGAAATAGT+AGG | 0.450033 | 5.4:+11908897 | None:intergenic |
| TCTGGATTCACTGGAAGTGC+TGG | 0.452268 | 5.4:-11913876 | MS.gene59336:intron |
| CAAAGGATGAAGCACTGCTT+TGG | 0.456478 | 5.4:-11912559 | MS.gene59336:CDS |
| ATAGCAAATGCGTGAACAAC+AGG | 0.460986 | 5.4:+11911477 | None:intergenic |
| AGATTTCCTAATGGAACAAA+TGG | 0.462309 | 5.4:-11908329 | MS.gene59336:intron |
| CAGCAATTGGGGTTGACCCT+TGG | 0.465455 | 5.4:-11911938 | MS.gene59336:CDS |
| GTTAAGAAAAGCCCATGTTC+GGG | 0.471059 | 5.4:-11910342 | MS.gene59336:CDS |
| CAGCCGCACCATCCCGAACA+TGG | 0.478470 | 5.4:+11910330 | None:intergenic |
| GCATTTGTTTCTGGATTCAC+TGG | 0.478804 | 5.4:-11913885 | MS.gene59336:CDS |
| TTCCCTACTATTTCCTCAGT+AGG | 0.480887 | 5.4:-11908900 | MS.gene59336:CDS |
| TGTCTTGCAGCAATCACCTC+TGG | 0.487228 | 5.4:-11910713 | MS.gene59336:CDS |
| TTCCAGAAAACAGCAGAAGC+TGG | 0.492040 | 5.4:-11911874 | MS.gene59336:CDS |
| GTCATCCAATACAGGTTGCT+TGG | 0.492637 | 5.4:-11911536 | MS.gene59336:intron |
| CTTGATTATCGACATGGAAC+CGG | 0.493586 | 5.4:-11908149 | MS.gene59336:CDS |
| ACTATGAGGATGGAGCATTT+GGG | 0.498108 | 5.4:-11907728 | MS.gene59336:CDS |
| AGAGCATAACAGCATGAAGC+TGG | 0.501145 | 5.4:+11910763 | None:intergenic |
| TCGCTTGTCCACATAAATGA+AGG | 0.507917 | 5.4:+11911437 | None:intergenic |
| TAGAACCCAGTGGAATTGGA+TGG | 0.510762 | 5.4:-11910365 | MS.gene59336:CDS |
| TTCAGAACCTGGTTACTATG+AGG | 0.511196 | 5.4:-11907742 | MS.gene59336:intron |
| AACACAGCTCACACAGCTAC+AGG | 0.512117 | 5.4:+11907328 | None:intergenic |
| AATTGATACTGCTCAAAGAT+GGG | 0.512479 | 5.4:-11911907 | MS.gene59336:CDS |
| GAGACCTTCGGATCATGAAA+AGG | 0.512831 | 5.4:-11908627 | MS.gene59336:CDS |
| AAGCTGGATCAGCCCATATG+AGG | 0.522455 | 5.4:+11910779 | None:intergenic |
| GCCAAAAGATGCAGCAATTG+GGG | 0.529055 | 5.4:-11911949 | MS.gene59336:CDS |
| ACGGCAGCATTAATTTCTGC+AGG | 0.534012 | 5.4:+11911804 | None:intergenic |
| AGCCCATGTTCGGGATGGTG+CGG | 0.537007 | 5.4:-11910333 | MS.gene59336:CDS |
| GCTTGGCTGTATAATATTCG+TGG | 0.537072 | 5.4:-11911519 | MS.gene59336:CDS |
| TATCGACATGGAACCGGTCA+CGG | 0.540108 | 5.4:-11908143 | MS.gene59336:CDS |
| TTTGAGAAATAAGCTTGCAC+AGG | 0.543705 | 5.4:-11911730 | MS.gene59336:CDS |
| CAAGCGAAAGGTGTCTATTG+AGG | 0.547410 | 5.4:-11911421 | MS.gene59336:intron |
| AGAATTTCGAGCATCAAAAG+AGG | 0.549148 | 5.4:-11909453 | MS.gene59336:intron |
| AGCCAAAATATCTCTACACT+TGG | 0.549514 | 5.4:+11907399 | None:intergenic |
| GAAGCACTGCTTTGGACCGA+TGG | 0.555358 | 5.4:-11912551 | MS.gene59336:CDS |
| TTCGAGAAAGAATATCAAGT+TGG | 0.559945 | 5.4:+11908192 | None:intergenic |
| AAAGAGTAGCAACCTCATAT+GGG | 0.564283 | 5.4:-11910791 | MS.gene59336:CDS |
| AAAACTCATTTAGAGGAGAA+CGG | 0.567620 | 5.4:-11910979 | MS.gene59336:CDS |
| TATCGTTTGAGCATATTACC+TGG | 0.570260 | 5.4:-11907635 | MS.gene59336:CDS |
| CATTTATGTGGACAAGCGAA+AGG | 0.571196 | 5.4:-11911433 | MS.gene59336:CDS |
| TTTGGTCTTGATTATCGACA+TGG | 0.573753 | 5.4:-11908155 | MS.gene59336:CDS |
| ATTCTGAAACTGATTAAATG+AGG | 0.576925 | 5.4:+11907977 | None:intergenic |
| ATCGTTTGAGCATATTACCT+GGG | 0.578375 | 5.4:-11907634 | MS.gene59336:intron |
| GCCATCCAGATATCTACAGC+AGG | 0.578581 | 5.4:+11912461 | None:intergenic |
| AGCCGCACCATCCCGAACAT+GGG | 0.579490 | 5.4:+11910331 | None:intergenic |
| GAACCTGGTTACTATGAGGA+TGG | 0.579953 | 5.4:-11907738 | MS.gene59336:CDS |
| AGGTTTGGCACTTATAACAA+AGG | 0.585242 | 5.4:-11912576 | MS.gene59336:CDS |
| GTAGGACCCAATACCGTGAC+CGG | 0.585651 | 5.4:+11908130 | None:intergenic |
| AGAACCCAGTGGAATTGGAT+GGG | 0.592752 | 5.4:-11910364 | MS.gene59336:CDS |
| GGCCTACTGAGGAAATAGTA+GGG | 0.603464 | 5.4:+11908898 | None:intergenic |
| AACAACAACTTAGTGATCAG+TGG | 0.603882 | 5.4:-11912508 | MS.gene59336:CDS |
| TAATATTCGTGGAAAAGATG+TGG | 0.605682 | 5.4:-11911508 | MS.gene59336:CDS |
| GCAGCATTAATTTCTGCAGG+TGG | 0.606074 | 5.4:+11911807 | None:intergenic |
| TCACACAGCTACAGGTTCTG+TGG | 0.607304 | 5.4:+11907336 | None:intergenic |
| CTAACCGTCGGTAACAGTCA+TGG | 0.608781 | 5.4:+11907931 | None:intergenic |
| CTGCAGAAAATAACGTCCAT+CGG | 0.614375 | 5.4:+11912535 | None:intergenic |
| TTAACCCATCCAATTCCACT+GGG | 0.614706 | 5.4:+11910360 | None:intergenic |
| CGAAGGTCTCCCAAAATGAA+CGG | 0.616371 | 5.4:+11908640 | None:intergenic |
| TCCTGCTGTAGATATCTGGA+TGG | 0.628115 | 5.4:-11912462 | MS.gene59336:CDS |
| TACAGAAGTAAGCTTAGATG+CGG | 0.629352 | 5.4:-11910938 | MS.gene59336:CDS |
| TCCTACCTGAATGTCCATGA+AGG | 0.631448 | 5.4:-11908113 | MS.gene59336:intron |
| GCTCCATCCTCATAGTAACC+AGG | 0.632228 | 5.4:+11907735 | None:intergenic |
| TGATTCCATATCTACTGTCA+AGG | 0.633943 | 5.4:-11910893 | MS.gene59336:CDS |
| TGGATGAAGCTGAAAATGCA+TGG | 0.635806 | 5.4:-11907369 | MS.gene59336:CDS |
| ACAACTAAAGCATGAAGAGG+TGG | 0.636822 | 5.4:+11914089 | None:intergenic |
| AGAAAAGCCCATGTTCGGGA+TGG | 0.637022 | 5.4:-11910338 | MS.gene59336:CDS |
| AGCTGCATTTGGGCCTACTG+AGG | 0.640424 | 5.4:+11908887 | None:intergenic |
| ACAGTCATGGAAGCTTGCAA+TGG | 0.640918 | 5.4:+11907944 | None:intergenic |
| TATCAATTGAAATGCACCAA+GGG | 0.647183 | 5.4:+11911922 | None:intergenic |
| GGAACAACTAAAGCATGAAG+AGG | 0.648851 | 5.4:+11914086 | None:intergenic |
| CTTGCACAGGAGCATGCTCG+AGG | 0.658974 | 5.4:-11911717 | MS.gene59336:CDS |
| AAACTTTAATGGTTGTACAA+CGG | 0.664517 | 5.4:+11911785 | None:intergenic |
| GCTGCAAGACAACTGCATCA+GGG | 0.675527 | 5.4:+11910725 | None:intergenic |
| TCAAGACCAAAGTTCCACAA+AGG | 0.676845 | 5.4:+11908167 | None:intergenic |
| GCTTCCATGACTGTTACCGA+CGG | 0.680223 | 5.4:-11907935 | MS.gene59336:intron |
| TTATTGCTTGTAGAACCCAG+TGG | 0.692009 | 5.4:-11910375 | MS.gene59336:intron |
| TGAAAAGGCTTGTTATACAG+CGG | 0.693773 | 5.4:-11908612 | MS.gene59336:intron |
| GAAGTCCTTGAAATTGACTG+AGG | 0.707917 | 5.4:-11909498 | MS.gene59336:CDS |
| ACCTTCATGGACATTCAGGT+AGG | 0.711577 | 5.4:+11908112 | None:intergenic |
| GTATCAATTGAAATGCACCA+AGG | 0.717415 | 5.4:+11911921 | None:intergenic |
| GAATGTGCTTGTTATCAATG+AGG | 0.735864 | 5.4:-11907694 | MS.gene59336:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATATTATATACATATTTA+AGG | + | chr5.4:11910284-11910303 | None:intergenic | 10.0% |
| !! | TAAAAAGATAAAAAGATAAA+TGG | + | chr5.4:11913615-11913634 | None:intergenic | 10.0% |
| !! | TTGAATCATATATTAATTTA+GGG | - | chr5.4:11907668-11907687 | MS.gene59336:CDS | 10.0% |
| !!! | ATAAAAGTTTTTTAAGATAA+GGG | + | chr5.4:11911035-11911054 | None:intergenic | 10.0% |
| !!! | TATAAAAGTTTTTTAAGATA+AGG | + | chr5.4:11911036-11911055 | None:intergenic | 10.0% |
| !!! | TCTAGATATATTTAATTTTT+TGG | - | chr5.4:11911220-11911239 | MS.gene59336:intron | 10.0% |
| !!! | TTTATTTTTACTTTTCTTAA+TGG | - | chr5.4:11911815-11911834 | MS.gene59336:CDS | 10.0% |
| !!! | TTTTCATTTTCTTATTAAAA+TGG | - | chr5.4:11908869-11908888 | MS.gene59336:CDS | 10.0% |
| !! | AAAAAAAATTAGCATGAAAA+AGG | + | chr5.4:11909903-11909922 | None:intergenic | 15.0% |
| !! | AAAAAAATTAGCATGAAAAA+GGG | + | chr5.4:11909902-11909921 | None:intergenic | 15.0% |
| !! | AAAAACAAGAAAGAAAAATA+TGG | + | chr5.4:11908853-11908872 | None:intergenic | 15.0% |
| !! | AAAATTAAAGATAAAACAAG+AGG | - | chr5.4:11909245-11909264 | MS.gene59336:intron | 15.0% |
| !! | AATTAAAAAACAAAACTGTA+AGG | + | chr5.4:11909851-11909870 | None:intergenic | 15.0% |
| !! | AGAATTGATTATATTTGTTT+CGG | - | chr5.4:11907696-11907715 | MS.gene59336:CDS | 15.0% |
| !! | ATTAAAAAACAAAACTGTAA+GGG | + | chr5.4:11909850-11909869 | None:intergenic | 15.0% |
| !! | ATTAGGTTTATATTTATTTC+TGG | - | chr5.4:11908586-11908605 | MS.gene59336:intron | 15.0% |
| !! | GTTGAATCATATATTAATTT+AGG | - | chr5.4:11907667-11907686 | MS.gene59336:CDS | 15.0% |
| !! | TATAAGTTTGAAAATGAATT+AGG | - | chr5.4:11908735-11908754 | MS.gene59336:intron | 15.0% |
| !! | TGTATATAATATAGTAAGAA+TGG | - | chr5.4:11910290-11910309 | MS.gene59336:intron | 15.0% |
| !! | TGTGAAAATTAAGAAAAAAT+TGG | - | chr5.4:11911683-11911702 | MS.gene59336:intron | 15.0% |
| !! | TTCAGAGAATAAATAAAATT+GGG | + | chr5.4:11913048-11913067 | None:intergenic | 15.0% |
| !!! | AAAATTTATCTTTTTGATTC+TGG | - | chr5.4:11912660-11912679 | MS.gene59336:intron | 15.0% |
| !!! | AACTGTGATTTTTTTTATAT+GGG | - | chr5.4:11909462-11909481 | MS.gene59336:CDS | 15.0% |
| !!! | AATTTTATTTATTCTCTGAA+GGG | - | chr5.4:11913048-11913067 | MS.gene59336:intron | 15.0% |
| !!! | ATATTTAATTTTTTGGATGA+GGG | - | chr5.4:11911227-11911246 | MS.gene59336:intron | 15.0% |
| !!! | ATTGGAAATTTTGAAATAAA+GGG | + | chr5.4:11910154-11910173 | None:intergenic | 15.0% |
| !!! | ATTTTTTCTTAATTTTCACA+AGG | + | chr5.4:11911683-11911702 | None:intergenic | 15.0% |
| !!! | CTTTTTTCAATTTATTTTAC+TGG | - | chr5.4:11913641-11913660 | MS.gene59336:intron | 15.0% |
| !!! | TAACTGTGATTTTTTTTATA+TGG | - | chr5.4:11909461-11909480 | MS.gene59336:CDS | 15.0% |
| !!! | TATATTTAATTTTTTGGATG+AGG | - | chr5.4:11911226-11911245 | MS.gene59336:intron | 15.0% |
| !!! | TTCATGAAAAATTTTATAGT+GGG | + | chr5.4:11911744-11911763 | None:intergenic | 15.0% |
| !!! | TTTCATGAAAAATTTTATAG+TGG | + | chr5.4:11911745-11911764 | None:intergenic | 15.0% |
| !! | AACTCTATTAATTCATAAGT+GGG | - | chr5.4:11911483-11911502 | MS.gene59336:CDS | 20.0% |
| !! | AATAAATAAAATTGGGAATG+CGG | + | chr5.4:11913041-11913060 | None:intergenic | 20.0% |
| !! | AATAGAATCAAAATAAGGAA+TGG | + | chr5.4:11913410-11913429 | None:intergenic | 20.0% |
| !! | ATACAAATATTCTGAATCTA+TGG | + | chr5.4:11907792-11907811 | None:intergenic | 20.0% |
| !! | ATAGAATCAAAATAAGGAAT+GGG | + | chr5.4:11913409-11913428 | None:intergenic | 20.0% |
| !! | CTTCAGAGAATAAATAAAAT+TGG | + | chr5.4:11913049-11913068 | None:intergenic | 20.0% |
| !! | GAAGATTAAGAATGATATAT+TGG | - | chr5.4:11910375-11910394 | MS.gene59336:intron | 20.0% |
| !! | GATATACTAAATGTTATAGA+AGG | + | chr5.4:11913001-11913020 | None:intergenic | 20.0% |
| !! | TATAACCTAAAACGTAAATT+AGG | - | chr5.4:11908569-11908588 | MS.gene59336:intron | 20.0% |
| !! | TATTAATCATGTTAGAGTTT+AGG | + | chr5.4:11911644-11911663 | None:intergenic | 20.0% |
| !! | TCCTAAGATAATAAACTTAA+GGG | + | chr5.4:11910976-11910995 | None:intergenic | 20.0% |
| !! | TCGAAAATAGAATCAAAATA+AGG | + | chr5.4:11913415-11913434 | None:intergenic | 20.0% |
| !! | TGATTCAACAAAAAAACAAA+AGG | + | chr5.4:11907656-11907675 | None:intergenic | 20.0% |
| !! | TTAAAAAACAAAACTGTAAG+GGG | + | chr5.4:11909849-11909868 | None:intergenic | 20.0% |
| !! | TTCAATTACATTGATACATA+TGG | - | chr5.4:11910914-11910933 | MS.gene59336:CDS | 20.0% |
| !! | TTCCTAAGATAATAAACTTA+AGG | + | chr5.4:11910977-11910996 | None:intergenic | 20.0% |
| !!! | AAAAGGTATCATAAAGTTTA+TGG | + | chr5.4:11907639-11907658 | None:intergenic | 20.0% |
| !!! | AAATTTAATTTTGGCGATAA+AGG | - | chr5.4:11913810-11913829 | MS.gene59336:intron | 20.0% |
| !!! | AACATTTGTTGACTTTTAAA+TGG | + | chr5.4:11913667-11913686 | None:intergenic | 20.0% |
| !!! | AATATAAATTTTCAGCTTTC+TGG | + | chr5.4:11912185-11912204 | None:intergenic | 20.0% |
| !!! | ACCTACAAGAATTTTAAAAA+GGG | + | chr5.4:11913259-11913278 | None:intergenic | 20.0% |
| !!! | ATAAACCTAATTTACGTTTT+AGG | + | chr5.4:11908577-11908596 | None:intergenic | 20.0% |
| !!! | ATATAAATTTTCAGCTTTCT+GGG | + | chr5.4:11912184-11912203 | None:intergenic | 20.0% |
| !!! | ATATAATATAGTTCTATTGC+CGG | + | chr5.4:11910210-11910229 | None:intergenic | 20.0% |
| !!! | ATTAAGTATTCTTTTCGATA+AGG | - | chr5.4:11912059-11912078 | MS.gene59336:intron | 20.0% |
| !!! | ATTTTATTTATTCTCTGAAG+GGG | - | chr5.4:11913049-11913068 | MS.gene59336:intron | 20.0% |
| !!! | CAATTTTATTTATTCTCTGA+AGG | - | chr5.4:11913047-11913066 | MS.gene59336:intron | 20.0% |
| !!! | CAGTTTTGTTTTTTAATTAG+AGG | - | chr5.4:11909853-11909872 | MS.gene59336:intron | 20.0% |
| !!! | CATTGGAAATTTTGAAATAA+AGG | + | chr5.4:11910155-11910174 | None:intergenic | 20.0% |
| !!! | GCTGATACAAAATTTAATTT+TGG | - | chr5.4:11913801-11913820 | MS.gene59336:intron | 20.0% |
| !!! | TATTACAAAGTTTTACTCTT+AGG | - | chr5.4:11913167-11913186 | MS.gene59336:intron | 20.0% |
| !!! | TCAAAAAGATAAATTTTGTC+TGG | + | chr5.4:11912657-11912676 | None:intergenic | 20.0% |
| ! | AAACTGAAGTTTATTTACGT+GGG | - | chr5.4:11910353-11910372 | MS.gene59336:CDS | 25.0% |
| ! | AAACTTTAATGGTTGTACAA+CGG | + | chr5.4:11909691-11909710 | None:intergenic | 25.0% |
| ! | AAAGATAAAACAAGAGGATT+TGG | - | chr5.4:11909251-11909270 | MS.gene59336:intron | 25.0% |
| ! | AAATTATCAGTATACAGAAC+TGG | + | chr5.4:11912767-11912786 | None:intergenic | 25.0% |
| ! | AATGAATAATAGCTGCATTT+GGG | + | chr5.4:11912599-11912618 | None:intergenic | 25.0% |
| ! | AGTGAGTATCAGTAATAATA+AGG | + | chr5.4:11908309-11908328 | None:intergenic | 25.0% |
| ! | ATAAATAAAATTGGGAATGC+GGG | + | chr5.4:11913040-11913059 | None:intergenic | 25.0% |
| ! | ATAGTTAAACTATACCTTCA+TGG | + | chr5.4:11913377-11913396 | None:intergenic | 25.0% |
| ! | ATGCATAATACATGTCTATA+TGG | - | chr5.4:11907864-11907883 | MS.gene59336:intron | 25.0% |
| ! | ATTGGACTAACTAAAATATG+AGG | + | chr5.4:11911532-11911551 | None:intergenic | 25.0% |
| ! | ATTTCAGAGGTTAAAATCTT+TGG | + | chr5.4:11912132-11912151 | None:intergenic | 25.0% |
| ! | CAACACTAAAGACAAAATTT+AGG | - | chr5.4:11909093-11909112 | MS.gene59336:intron | 25.0% |
| ! | CGATTATTCTTAACGTTATT+CGG | - | chr5.4:11913687-11913706 | MS.gene59336:intron | 25.0% |
| ! | CTTCAGCAGTTATAAATTAT+TGG | - | chr5.4:11907744-11907763 | MS.gene59336:intron | 25.0% |
| ! | GAAAATGTAGTCAAATATGA+CGG | + | chr5.4:11912332-11912351 | None:intergenic | 25.0% |
| ! | GAACTCTATTAATTCATAAG+TGG | - | chr5.4:11911482-11911501 | MS.gene59336:CDS | 25.0% |
| ! | GTTAATGATCTTTGTATCTT+CGG | - | chr5.4:11910413-11910432 | MS.gene59336:intron | 25.0% |
| ! | TAAAATACACCAAAAGAGTA+AGG | + | chr5.4:11912734-11912753 | None:intergenic | 25.0% |
| ! | TAAACTGAAGTTTATTTACG+TGG | - | chr5.4:11910352-11910371 | MS.gene59336:CDS | 25.0% |
| ! | TAAATCCAGAAGAGAAAAAT+TGG | - | chr5.4:11914035-11914054 | MS.gene59336:intron | 25.0% |
| ! | TAATGAATAATAGCTGCATT+TGG | + | chr5.4:11912600-11912619 | None:intergenic | 25.0% |
| ! | TACAAATGACATTTGATTGT+TGG | - | chr5.4:11910830-11910849 | MS.gene59336:CDS | 25.0% |
| ! | TCAACACTAAAGACAAATTT+AGG | - | chr5.4:11909124-11909143 | MS.gene59336:intron | 25.0% |
| ! | TCCCTTAAGTTTATTATCTT+AGG | - | chr5.4:11910972-11910991 | MS.gene59336:CDS | 25.0% |
| ! | TTATATTTGTTTCGGTTTCA+AGG | - | chr5.4:11907704-11907723 | MS.gene59336:CDS | 25.0% |
| ! | TTCTTATTAAAATGGCATTC+AGG | - | chr5.4:11908877-11908896 | MS.gene59336:CDS | 25.0% |
| ! | TTTACCATTTACACTCTTAT+TGG | + | chr5.4:11910648-11910667 | None:intergenic | 25.0% |
| ! | TTTGAAAATGAATTAGGCTT+TGG | - | chr5.4:11908741-11908760 | MS.gene59336:intron | 25.0% |
| !! | ACCAATGAAAATTTTATTCG+TGG | - | chr5.4:11910323-11910342 | MS.gene59336:CDS | 25.0% |
| !! | ACCACGAATAAAATTTTCAT+TGG | + | chr5.4:11910327-11910346 | None:intergenic | 25.0% |
| !! | ATGCTTTTGATCAAAAGTTT+CGG | - | chr5.4:11908248-11908267 | MS.gene59336:intron | 25.0% |
| !! | ATTACATGAAAGATTTTCCA+AGG | + | chr5.4:11911881-11911900 | None:intergenic | 25.0% |
| !! | CAAAAGTACAAACTATTAAG+AGG | + | chr5.4:11909817-11909836 | None:intergenic | 25.0% |
| !! | CAATCAAATGTCATTTGTAA+AGG | + | chr5.4:11910829-11910848 | None:intergenic | 25.0% |
| !! | GTTGATAAAAGGTTTAGAAA+AGG | + | chr5.4:11908350-11908369 | None:intergenic | 25.0% |
| !! | TCAATCAACTTTGTTTGATA+TGG | + | chr5.4:11914004-11914023 | None:intergenic | 25.0% |
| !! | TTACATGAAAGATTTTCCAA+GGG | + | chr5.4:11911880-11911899 | None:intergenic | 25.0% |
| !! | TTCTAAACCTTTTATCAACT+AGG | - | chr5.4:11908351-11908370 | MS.gene59336:CDS | 25.0% |
| !! | TTTTCCTTTTTCCTTTGAAT+CGG | - | chr5.4:11911280-11911299 | MS.gene59336:intron | 25.0% |
| !! | TTTTGGCAAATTCTAGTAAA+TGG | + | chr5.4:11909511-11909530 | None:intergenic | 25.0% |
| !!! | ATTCTGAAACTGATTAAATG+AGG | + | chr5.4:11913499-11913518 | None:intergenic | 25.0% |
| !!! | ATTGAAACAGCTTTTTCAAA+TGG | + | chr5.4:11912157-11912176 | None:intergenic | 25.0% |
| !!! | CTTTTGGTGTATTTTAATCA+TGG | - | chr5.4:11912738-11912757 | MS.gene59336:intron | 25.0% |
| !!! | GACCTACAAGAATTTTAAAA+AGG | + | chr5.4:11913260-11913279 | None:intergenic | 25.0% |
| !!! | TAAAAATTGTGTTTTTTGCC+AGG | - | chr5.4:11910469-11910488 | MS.gene59336:intron | 25.0% |
| !!! | TCAAGTTGAATAATTGGTTT+CGG | - | chr5.4:11908693-11908712 | MS.gene59336:intron | 25.0% |
| !!! | TCCCTTTTTAAAATTCTTGT+AGG | - | chr5.4:11913255-11913274 | MS.gene59336:intron | 25.0% |
| !!! | TCTAATACCTAGTTGATAAA+AGG | + | chr5.4:11908361-11908380 | None:intergenic | 25.0% |
| !!! | TTTACTTTTCTTAATGGTGA+TGG | - | chr5.4:11911821-11911840 | MS.gene59336:CDS | 25.0% |
| !!! | TTTTCAAATGGTTATTTCAG+AGG | + | chr5.4:11912145-11912164 | None:intergenic | 25.0% |
| AAAACTCATTTAGAGGAGAA+CGG | - | chr5.4:11910494-11910513 | MS.gene59336:intron | 30.0% | |
| AAAATATGGATGCATTCCAT+AGG | + | chr5.4:11908839-11908858 | None:intergenic | 30.0% | |
| AAATTATACAGCAAGATCTG+AGG | - | chr5.4:11911305-11911324 | MS.gene59336:intron | 30.0% | |
| AAGGCACATATGTCAAAATA+GGG | - | chr5.4:11909301-11909320 | MS.gene59336:intron | 30.0% | |
| AATGTATACTATACAGACCT+GGG | + | chr5.4:11912688-11912707 | None:intergenic | 30.0% | |
| AATTAAGAAAAAATTGGCCC+AGG | - | chr5.4:11911689-11911708 | MS.gene59336:intron | 30.0% | |
| AATTGATACTGCTCAAAGAT+GGG | - | chr5.4:11909566-11909585 | MS.gene59336:intron | 30.0% | |
| ACAACATTGCTTGATAGATT+AGG | - | chr5.4:11910887-11910906 | MS.gene59336:CDS | 30.0% | |
| ACAATAGAAACGAAGTTACA+AGG | - | chr5.4:11912408-11912427 | MS.gene59336:intron | 30.0% | |
| AGATTCATGTATCTGTTGTT+TGG | - | chr5.4:11908517-11908536 | MS.gene59336:intron | 30.0% | |
| AGATTTCCTAATGGAACAAA+TGG | - | chr5.4:11913144-11913163 | MS.gene59336:intron | 30.0% | |
| ATCAATCAAGTGGTTATATC+AGG | + | chr5.4:11908034-11908053 | None:intergenic | 30.0% | |
| ATTAGAGAGAGTTATTAGCA+TGG | - | chr5.4:11911594-11911613 | MS.gene59336:intron | 30.0% | |
| ATTTGTTCCATTAGGAAATC+TGG | + | chr5.4:11913145-11913164 | None:intergenic | 30.0% | |
| CAAAATCTAATACTAACCGT+CGG | + | chr5.4:11913557-11913576 | None:intergenic | 30.0% | |
| CAACCAAATTCTTAGTTGTT+TGG | + | chr5.4:11909626-11909645 | None:intergenic | 30.0% | |
| CATATTTGATTCACTCTCAA+TGG | - | chr5.4:11908811-11908830 | MS.gene59336:CDS | 30.0% | |
| CCAATTATTCAACTTGAGAA+AGG | + | chr5.4:11908690-11908709 | None:intergenic | 30.0% | |
| CTCAAAGAAATATGAATGCA+TGG | - | chr5.4:11912453-11912472 | MS.gene59336:intron | 30.0% | |
| GACAATATTCTTCTGATAGA+CGG | + | chr5.4:11911777-11911796 | None:intergenic | 30.0% | |
| GTAATACCATTTGTTCCATT+AGG | + | chr5.4:11913153-11913172 | None:intergenic | 30.0% | |
| GTACTAATGTTATAGCATAG+CGG | + | chr5.4:11913927-11913946 | None:intergenic | 30.0% | |
| TAAAATGTCATCAAATGCTC+AGG | + | chr5.4:11913875-11913894 | None:intergenic | 30.0% | |
| TAATATCACATAACATGTGC+AGG | - | chr5.4:11913472-11913491 | MS.gene59336:intron | 30.0% | |
| TAATATTCGTGGAAAAGATG+TGG | - | chr5.4:11909965-11909984 | MS.gene59336:intron | 30.0% | |
| TAATGTATACTATACAGACC+TGG | + | chr5.4:11912689-11912708 | None:intergenic | 30.0% | |
| TATCAATTGAAATGCACCAA+GGG | + | chr5.4:11909554-11909573 | None:intergenic | 30.0% | |
| TATGTATGTTTGTGCTTCAT+AGG | + | chr5.4:11908109-11908128 | None:intergenic | 30.0% | |
| TCAAACATTCCTTCTTAAGA+TGG | + | chr5.4:11908474-11908493 | None:intergenic | 30.0% | |
| TCTTAGGTGTCAAATTCTTT+GGG | - | chr5.4:11913183-11913202 | MS.gene59336:intron | 30.0% | |
| TGGATAATAAGGTTTGCATT+TGG | - | chr5.4:11911187-11911206 | MS.gene59336:intron | 30.0% | |
| TGTAGACTTACCTAAGAAAT+AGG | - | chr5.4:11911551-11911570 | MS.gene59336:intron | 30.0% | |
| TTCGAGAAAGAATATCAAGT+TGG | + | chr5.4:11913284-11913303 | None:intergenic | 30.0% | |
| TTGAGAGTGAATCAAATATG+AGG | + | chr5.4:11908811-11908830 | None:intergenic | 30.0% | |
| TTTCTTAGGTAAGTCTACAT+TGG | + | chr5.4:11911550-11911569 | None:intergenic | 30.0% | |
| ! | AAATTATTCTCCCATCCTTT+TGG | - | chr5.4:11912965-11912984 | MS.gene59336:intron | 30.0% |
| ! | AATAGTGAACCTTACTCTTT+TGG | - | chr5.4:11912722-11912741 | MS.gene59336:intron | 30.0% |
| ! | AGGTAGAAGAATTTTTGTCA+TGG | + | chr5.4:11910264-11910283 | None:intergenic | 30.0% |
| ! | ATATTGGCAGAGTTTTACTT+CGG | - | chr5.4:11910391-11910410 | MS.gene59336:intron | 30.0% |
| ! | ATTAAAATGGCATTCAGGTT+TGG | - | chr5.4:11908882-11908901 | MS.gene59336:CDS | 30.0% |
| ! | GAAACCAATAAGAGTGTAAA+TGG | - | chr5.4:11910641-11910660 | MS.gene59336:intron | 30.0% |
| ! | TCACAGAAGTTTTCAAACTA+TGG | - | chr5.4:11911949-11911968 | MS.gene59336:CDS | 30.0% |
| ! | TCAGATCTTGCTGTATAATT+TGG | + | chr5.4:11911306-11911325 | None:intergenic | 30.0% |
| ! | TTATATCAGGTTGTTAGAGT+TGG | + | chr5.4:11908021-11908040 | None:intergenic | 30.0% |
| ! | TTCAACCAATTTTTCTCTTC+TGG | + | chr5.4:11914043-11914062 | None:intergenic | 30.0% |
| ! | TTCCAAGTGTAGAGATATTT+TGG | - | chr5.4:11914072-11914091 | MS.gene59336:intron | 30.0% |
| ! | TTCTAAGAAAGACAAACAGT+CGG | + | chr5.4:11910116-11910135 | None:intergenic | 30.0% |
| ! | TTTTCTCTTCTGGATTTAGA+AGG | + | chr5.4:11914033-11914052 | None:intergenic | 30.0% |
| !! | AGAATTTGGTTGATGAAGTA+TGG | - | chr5.4:11909634-11909653 | MS.gene59336:intron | 30.0% |
| !! | ATTTGATGACATTTTAACGC+GGG | - | chr5.4:11913879-11913898 | MS.gene59336:CDS | 30.0% |
| !! | CATTTGATGACATTTTAACG+CGG | - | chr5.4:11913878-11913897 | MS.gene59336:CDS | 30.0% |
| !! | CCTTTCTCAAGTTGAATAAT+TGG | - | chr5.4:11908687-11908706 | MS.gene59336:intron | 30.0% |
| !!! | AGGAAGTGAGATTTTGATTT+GGG | - | chr5.4:11912930-11912949 | MS.gene59336:intron | 30.0% |
| !!! | CAAAGGTTTCTCCTTTTTTA+CGG | + | chr5.4:11911395-11911414 | None:intergenic | 30.0% |
| !!! | CGTTATTCGGTTTTATTCAT+TGG | - | chr5.4:11913700-11913719 | MS.gene59336:intron | 30.0% |
| !!! | GATACAACCTTTAAAGCTTT+TGG | + | chr5.4:11910791-11910810 | None:intergenic | 30.0% |
| AAAAGAGTAGCAACCTCATA+TGG | - | chr5.4:11910681-11910700 | MS.gene59336:intron | 35.0% | |
| AAAATCTCACTTCCTGTTGA+GGG | + | chr5.4:11912925-11912944 | None:intergenic | 35.0% | |
| AAACAAGGAGAAGCTATTTG+TGG | + | chr5.4:11909185-11909204 | None:intergenic | 35.0% | |
| AAAGAGTAGCAACCTCATAT+GGG | - | chr5.4:11910682-11910701 | MS.gene59336:intron | 35.0% | |
| AACAACAACTTAGTGATCAG+TGG | - | chr5.4:11908965-11908984 | MS.gene59336:intron | 35.0% | |
| AATAAGCTGTGTTACCAAAG+TGG | + | chr5.4:11910450-11910469 | None:intergenic | 35.0% | |
| ACCTGATGATAATCTTCAGA+AGG | + | chr5.4:11907411-11907430 | None:intergenic | 35.0% | |
| ACTATAAGCAACAGCTGAAA+CGG | + | chr5.4:11912252-11912271 | None:intergenic | 35.0% | |
| AGAATTTCGAGCATCAAAAG+AGG | - | chr5.4:11912020-11912039 | MS.gene59336:intron | 35.0% | |
| AGCCAAAATATCTCTACACT+TGG | + | chr5.4:11914077-11914096 | None:intergenic | 35.0% | |
| AGGTTTGGCACTTATAACAA+AGG | - | chr5.4:11908897-11908916 | MS.gene59336:CDS | 35.0% | |
| ATCGTTTGAGCATATTACCT+GGG | - | chr5.4:11913839-11913858 | MS.gene59336:intron | 35.0% | |
| ATCTCTACACTTGGAATGAT+AGG | + | chr5.4:11914068-11914087 | None:intergenic | 35.0% | |
| ATGGAAGACTGTATGAATGA+TGG | - | chr5.4:11910933-11910952 | MS.gene59336:CDS | 35.0% | |
| ATTGTCTTGTCTTCATGTCT+AGG | + | chr5.4:11909371-11909390 | None:intergenic | 35.0% | |
| CAATTCTGCCTTCATTTATG+TGG | - | chr5.4:11910028-11910047 | MS.gene59336:intron | 35.0% | |
| CAATTGATACTGCTCAAAGA+TGG | - | chr5.4:11909565-11909584 | MS.gene59336:intron | 35.0% | |
| CACATAAATGAAGGCAGAAT+TGG | + | chr5.4:11910030-11910049 | None:intergenic | 35.0% | |
| CCAGGTTAAAACTCATTTAG+AGG | - | chr5.4:11910487-11910506 | MS.gene59336:intron | 35.0% | |
| CTAAAAGGTCACATTGCTTT+GGG | - | chr5.4:11913114-11913133 | MS.gene59336:intron | 35.0% | |
| CTAACAGACAAAGCAAAATC+AGG | + | chr5.4:11908395-11908414 | None:intergenic | 35.0% | |
| CTAAGTTCTCGTGTTTGAAA+TGG | + | chr5.4:11913227-11913246 | None:intergenic | 35.0% | |
| CTCTTAGGTGTCAAATTCTT+TGG | - | chr5.4:11913182-11913201 | MS.gene59336:intron | 35.0% | |
| CTGTTGTGCAATATCTTGTT+TGG | - | chr5.4:11911163-11911182 | MS.gene59336:intron | 35.0% | |
| CTTCATGATCCATCTTAAGA+AGG | - | chr5.4:11908462-11908481 | MS.gene59336:intron | 35.0% | |
| CTTCTTAAGATGGATCATGA+AGG | + | chr5.4:11908464-11908483 | None:intergenic | 35.0% | |
| GGTCCAAACAACTAAGAATT+TGG | - | chr5.4:11909620-11909639 | MS.gene59336:intron | 35.0% | |
| GTACAACCATTAAAGTTTGC+TGG | - | chr5.4:11909693-11909712 | MS.gene59336:intron | 35.0% | |
| GTATCAATTGAAATGCACCA+AGG | + | chr5.4:11909555-11909574 | None:intergenic | 35.0% | |
| GTGCAGATGCAAGATATTTA+TGG | - | chr5.4:11911340-11911359 | MS.gene59336:intron | 35.0% | |
| GTGTGTTTGTAGTATCTAGA+TGG | - | chr5.4:11912790-11912809 | MS.gene59336:intron | 35.0% | |
| TACAGAAGTAAGCTTAGATG+CGG | - | chr5.4:11910535-11910554 | MS.gene59336:intron | 35.0% | |
| TATCGTTTGAGCATATTACC+TGG | - | chr5.4:11913838-11913857 | MS.gene59336:intron | 35.0% | |
| TATTCGATGTCATCCAATAC+AGG | - | chr5.4:11909929-11909948 | MS.gene59336:intron | 35.0% | |
| TGATCTTTGTATCTTCGGAT+TGG | - | chr5.4:11910418-11910437 | MS.gene59336:intron | 35.0% | |
| TGATTCCATATCTACTGTCA+AGG | - | chr5.4:11910580-11910599 | MS.gene59336:intron | 35.0% | |
| TGTACATGGCATTGTTGATA+TGG | - | chr5.4:11909156-11909175 | MS.gene59336:intron | 35.0% | |
| TTAGGAGATGATGTTGTACA+TGG | - | chr5.4:11909142-11909161 | MS.gene59336:intron | 35.0% | |
| TTCTTTCTCGAATTCCTTTG+TGG | - | chr5.4:11913292-11913311 | MS.gene59336:intron | 35.0% | |
| TTTGAGAAATAAGCTTGCAC+AGG | - | chr5.4:11909743-11909762 | MS.gene59336:intron | 35.0% | |
| TTTGGAAGAGAACTATAGAG+AGG | - | chr5.4:11909269-11909288 | MS.gene59336:intron | 35.0% | |
| ! | AGAAGTTTTCAAACTATGGC+AGG | - | chr5.4:11911953-11911972 | MS.gene59336:CDS | 35.0% |
| ! | ATCTGTTTTCAGCATTTCAG+AGG | - | chr5.4:11912543-11912562 | MS.gene59336:CDS | 35.0% |
| ! | ATTACACGAACCGTTCATTT+TGG | - | chr5.4:11912823-11912842 | MS.gene59336:intron | 35.0% |
| ! | CAAATAGCTTCTCCTTGTTT+AGG | - | chr5.4:11909185-11909204 | MS.gene59336:intron | 35.0% |
| ! | CAAGATATTTATGGAGCATC+TGG | - | chr5.4:11911349-11911368 | MS.gene59336:intron | 35.0% |
| ! | GAACAAATTTGGAGCTAATG+AGG | + | chr5.4:11910091-11910110 | None:intergenic | 35.0% |
| ! | GAAGGCACATATGTCAAAAT+AGG | - | chr5.4:11909300-11909319 | MS.gene59336:intron | 35.0% |
| ! | GTATAATTTGGCCGATTCAA+AGG | + | chr5.4:11911294-11911313 | None:intergenic | 35.0% |
| ! | TCCTTCTGAAGATTATCATC+AGG | - | chr5.4:11907407-11907426 | MS.gene59336:CDS | 35.0% |
| ! | TCTTGTTTGGCTGGATAATA+AGG | - | chr5.4:11911176-11911195 | MS.gene59336:intron | 35.0% |
| ! | TTACACGAACCGTTCATTTT+GGG | - | chr5.4:11912824-11912843 | MS.gene59336:intron | 35.0% |
| ! | TTTTCAGCTTCATCCAAATG+TGG | + | chr5.4:11914100-11914119 | None:intergenic | 35.0% |
| !! | ATCTGTTGTTTGGTGTATGT+AGG | - | chr5.4:11908527-11908546 | MS.gene59336:intron | 35.0% |
| !! | CCTCTAAATGAGTTTTAACC+TGG | + | chr5.4:11910490-11910509 | None:intergenic | 35.0% |
| !! | CTTTTGATCAAAAGCATGTC+TGG | + | chr5.4:11908245-11908264 | None:intergenic | 35.0% |
| !! | GAATGTGCTTGTTATCAATG+AGG | - | chr5.4:11913779-11913798 | MS.gene59336:intron | 35.0% |
| !! | TAGAATGTTGTTTCTCGTGT+AGG | - | chr5.4:11913976-11913995 | MS.gene59336:intron | 35.0% |
| !! | TGAAAAGGCTTGTTATACAG+CGG | - | chr5.4:11912861-11912880 | MS.gene59336:intron | 35.0% |
| !! | TTTGGTCTTGATTATCGACA+TGG | - | chr5.4:11913318-11913337 | MS.gene59336:intron | 35.0% |
| !! | TTTTGTTATAGCCTGTGCTA+TGG | - | chr5.4:11913572-11913591 | MS.gene59336:intron | 35.0% |
| !!! | AGATATTTTGGCTCCACATT+TGG | - | chr5.4:11914084-11914103 | MS.gene59336:intron | 35.0% |
| !!! | CAGGAAGTGAGATTTTGATT+TGG | - | chr5.4:11912929-11912948 | MS.gene59336:intron | 35.0% |
| !!! | TCGGTTTTATTCATTGGAAC+TGG | - | chr5.4:11913706-11913725 | MS.gene59336:intron | 35.0% |
| AAAGCAAGCACAAACAACCT+TGG | + | chr5.4:11909217-11909236 | None:intergenic | 40.0% | |
| AACAGTCGGTGGAACAAATT+TGG | + | chr5.4:11910102-11910121 | None:intergenic | 40.0% | |
| AAGAAAAAATTGGCCCAGGT+TGG | - | chr5.4:11911693-11911712 | MS.gene59336:CDS | 40.0% | |
| AAGATCCTGCTGTAGATATC+TGG | - | chr5.4:11909007-11909026 | MS.gene59336:intron | 40.0% | |
| ACAACTAAAGCATGAAGAGG+TGG | + | chr5.4:11907387-11907406 | None:intergenic | 40.0% | |
| AGTCACCTCAGTCAATTTCA+AGG | + | chr5.4:11911983-11912002 | None:intergenic | 40.0% | |
| ATAGCAAATGCGTGAACAAC+AGG | + | chr5.4:11909999-11910018 | None:intergenic | 40.0% | |
| CAAAATCTCACTTCCTGTTG+AGG | + | chr5.4:11912926-11912945 | None:intergenic | 40.0% | |
| CATTTATGTGGACAAGCGAA+AGG | - | chr5.4:11910040-11910059 | MS.gene59336:intron | 40.0% | |
| CCTAAAAGGTCACATTGCTT+TGG | - | chr5.4:11913113-11913132 | MS.gene59336:intron | 40.0% | |
| CCTGAAAATGATTAGACCCT+TGG | - | chr5.4:11911861-11911880 | MS.gene59336:CDS | 40.0% | |
| CGAATTCCTTTGTGGAACTT+TGG | - | chr5.4:11913300-11913319 | MS.gene59336:intron | 40.0% | |
| CTATACCTTCATGGACATTC+AGG | + | chr5.4:11913368-11913387 | None:intergenic | 40.0% | |
| CTGCAGAAAATAACGTCCAT+CGG | + | chr5.4:11908941-11908960 | None:intergenic | 40.0% | |
| CTTCTGGATTTAGAAGGTTC+AGG | + | chr5.4:11914027-11914046 | None:intergenic | 40.0% | |
| CTTGATTATCGACATGGAAC+CGG | - | chr5.4:11913324-11913343 | MS.gene59336:intron | 40.0% | |
| GAAAATGTGTGATTCCTGCA+TGG | + | chr5.4:11912297-11912316 | None:intergenic | 40.0% | |
| GAAGAGAACTATAGAGAGGT+GGG | - | chr5.4:11909273-11909292 | MS.gene59336:intron | 40.0% | |
| GAAGTCCTTGAAATTGACTG+AGG | - | chr5.4:11911975-11911994 | MS.gene59336:intron | 40.0% | |
| GATCCCACTCTCAATTTGAT+TGG | + | chr5.4:11911510-11911529 | None:intergenic | 40.0% | |
| GCAGCTTATCATCAATCAAG+TGG | + | chr5.4:11908044-11908063 | None:intergenic | 40.0% | |
| GCTTGGCTGTATAATATTCG+TGG | - | chr5.4:11909954-11909973 | MS.gene59336:intron | 40.0% | |
| GGAAATGCCAGATTTCCTAA+TGG | - | chr5.4:11913135-11913154 | MS.gene59336:intron | 40.0% | |
| GGAACAACTAAAGCATGAAG+AGG | + | chr5.4:11907390-11907409 | None:intergenic | 40.0% | |
| GGTCACTACTTTCACAGAAT+GGG | + | chr5.4:11912227-11912246 | None:intergenic | 40.0% | |
| GGTCCAATCAAATTGAGAGT+GGG | - | chr5.4:11911504-11911523 | MS.gene59336:CDS | 40.0% | |
| GGTTAAGAAAAGCCCATGTT+CGG | - | chr5.4:11911130-11911149 | MS.gene59336:intron | 40.0% | |
| GTTAAGAAAAGCCCATGTTC+GGG | - | chr5.4:11911131-11911150 | MS.gene59336:intron | 40.0% | |
| TAAGAAAGACAAACAGTCGG+TGG | + | chr5.4:11910113-11910132 | None:intergenic | 40.0% | |
| TCAAGACCAAAGTTCCACAA+AGG | + | chr5.4:11913309-11913328 | None:intergenic | 40.0% | |
| TCACAAGAGGATGCTTACAA+AGG | + | chr5.4:11911412-11911431 | None:intergenic | 40.0% | |
| TCCTGTTGAGGGAAAAAACT+TGG | + | chr5.4:11912914-11912933 | None:intergenic | 40.0% | |
| TCGCTTGTCCACATAAATGA+AGG | + | chr5.4:11910039-11910058 | None:intergenic | 40.0% | |
| TGAAAAAGGGTGAACGTTTG+AGG | + | chr5.4:11909889-11909908 | None:intergenic | 40.0% | |
| TGCCAAAAGATGCAGCAATT+GGG | - | chr5.4:11909523-11909542 | MS.gene59336:intron | 40.0% | |
| TGGATGAAGCTGAAAATGCA+TGG | - | chr5.4:11914104-11914123 | MS.gene59336:CDS | 40.0% | |
| TGTCATCAAATGCTCAGGTT+AGG | + | chr5.4:11913870-11913889 | None:intergenic | 40.0% | |
| TTAACCCATCCAATTCCACT+GGG | + | chr5.4:11911116-11911135 | None:intergenic | 40.0% | |
| TTATTGCTTGTAGAACCCAG+TGG | - | chr5.4:11911098-11911117 | MS.gene59336:intron | 40.0% | |
| TTCACTCTCAATGGTTCCTA+TGG | - | chr5.4:11908820-11908839 | MS.gene59336:CDS | 40.0% | |
| TTCAGAACCTGGTTACTATG+AGG | - | chr5.4:11913731-11913750 | MS.gene59336:intron | 40.0% | |
| TTCCCTACTATTTCCTCAGT+AGG | - | chr5.4:11912573-11912592 | MS.gene59336:CDS | 40.0% | |
| TTGCCAAAAGATGCAGCAAT+TGG | - | chr5.4:11909522-11909541 | MS.gene59336:intron | 40.0% | |
| ! | ACTATGAGGATGGAGCATTT+GGG | - | chr5.4:11913745-11913764 | MS.gene59336:intron | 40.0% |
| ! | CATCACTGCTCCTATTTCTT+AGG | + | chr5.4:11911564-11911583 | None:intergenic | 40.0% |
| ! | CCAAAGCAATGTGACCTTTT+AGG | + | chr5.4:11913116-11913135 | None:intergenic | 40.0% |
| ! | CCAAGGGTCTAATCATTTTC+AGG | + | chr5.4:11911864-11911883 | None:intergenic | 40.0% |
| ! | CTTTTGCTAGCCAAAAGGAT+GGG | + | chr5.4:11912978-11912997 | None:intergenic | 40.0% |
| ! | GGCTCTTCCAAAAGCTTTAA+AGG | - | chr5.4:11910781-11910800 | MS.gene59336:CDS | 40.0% |
| ! | TACTATGAGGATGGAGCATT+TGG | - | chr5.4:11913744-11913763 | MS.gene59336:intron | 40.0% |
| ! | TCAGCACATTTTTCTGCTTC+TGG | + | chr5.4:11912627-11912646 | None:intergenic | 40.0% |
| ! | TGGAGCATTTGGGATAAGAT+TGG | - | chr5.4:11913755-11913774 | MS.gene59336:intron | 40.0% |
| ! | TGTGCAATATCTTGTTTGGC+TGG | - | chr5.4:11911167-11911186 | MS.gene59336:intron | 40.0% |
| ! | TGTTATAGCATAGCGGAACT+TGG | + | chr5.4:11913920-11913939 | None:intergenic | 40.0% |
| ! | TTGGCCGATTCAAAGGAAAA+AGG | + | chr5.4:11911287-11911306 | None:intergenic | 40.0% |
| !! | ACTAGCCTTGACAGTAGATA+TGG | + | chr5.4:11910588-11910607 | None:intergenic | 40.0% |
| !! | AGCATCTGGATACTTTTTGG+TGG | - | chr5.4:11911363-11911382 | MS.gene59336:intron | 40.0% |
| !! | ATGTTAGAGAGTGTCACAAG+AGG | + | chr5.4:11911425-11911444 | None:intergenic | 40.0% |
| !! | ATTTTAACGCGGGTCAATAG+CGG | - | chr5.4:11913889-11913908 | MS.gene59336:CDS | 40.0% |
| !! | GCATTTGTTTCTGGATTCAC+TGG | - | chr5.4:11907588-11907607 | MS.gene59336:intron | 40.0% |
| !! | TGGAGCATCTGGATACTTTT+TGG | - | chr5.4:11911360-11911379 | MS.gene59336:intron | 40.0% |
| !!! | TCCAAGTTTTTTCCCTCAAC+AGG | - | chr5.4:11912910-11912929 | MS.gene59336:intron | 40.0% |
| AAATGGTGTGCCAATCCCAT+AGG | + | chr5.4:11913598-11913617 | None:intergenic | 45.0% | |
| AACTGCATCAGGGTTCAGTT+TGG | + | chr5.4:11910741-11910760 | None:intergenic | 45.0% | |
| ACAGTCATGGAAGCTTGCAA+TGG | + | chr5.4:11913532-11913551 | None:intergenic | 45.0% | |
| ACCTTCATGGACATTCAGGT+AGG | + | chr5.4:11913364-11913383 | None:intergenic | 45.0% | |
| ACGGCAGCATTAATTTCTGC+AGG | + | chr5.4:11909672-11909691 | None:intergenic | 45.0% | |
| ACTGTCACAAATGCCAACCT+GGG | + | chr5.4:11911709-11911728 | None:intergenic | 45.0% | |
| AGAACCCAGTGGAATTGGAT+GGG | - | chr5.4:11911109-11911128 | MS.gene59336:intron | 45.0% | |
| AGAGCATAACAGCATGAAGC+TGG | + | chr5.4:11910713-11910732 | None:intergenic | 45.0% | |
| AGATTCTGACCATACCATGC+AGG | - | chr5.4:11912280-11912299 | MS.gene59336:intron | 45.0% | |
| AGGCTTCAGATGAGTAGCAT+TGG | + | chr5.4:11910172-11910191 | None:intergenic | 45.0% | |
| CGAAGGTCTCCCAAAATGAA+CGG | + | chr5.4:11912836-11912855 | None:intergenic | 45.0% | |
| CGGTCACTACTTTCACAGAA+TGG | + | chr5.4:11912228-11912247 | None:intergenic | 45.0% | |
| CTTAACCCATCCAATTCCAC+TGG | + | chr5.4:11911117-11911136 | None:intergenic | 45.0% | |
| CTTGTAGAACCCAGTGGAAT+TGG | - | chr5.4:11911104-11911123 | MS.gene59336:intron | 45.0% | |
| GAACCTGGTTACTATGAGGA+TGG | - | chr5.4:11913735-11913754 | MS.gene59336:intron | 45.0% | |
| GAGACCTTCGGATCATGAAA+AGG | - | chr5.4:11912846-11912865 | MS.gene59336:intron | 45.0% | |
| GAGCGACCAGCAAACTTTAA+TGG | + | chr5.4:11909702-11909721 | None:intergenic | 45.0% | |
| GCAGCATTAATTTCTGCAGG+TGG | + | chr5.4:11909669-11909688 | None:intergenic | 45.0% | |
| GCCAAAAGATGCAGCAATTG+GGG | - | chr5.4:11909524-11909543 | MS.gene59336:intron | 45.0% | |
| GGAAGAGAACTATAGAGAGG+TGG | - | chr5.4:11909272-11909291 | MS.gene59336:intron | 45.0% | |
| GGCCTACTGAGGAAATAGTA+GGG | + | chr5.4:11912578-11912597 | None:intergenic | 45.0% | |
| GGGTCCAATCAAATTGAGAG+TGG | - | chr5.4:11911503-11911522 | MS.gene59336:CDS | 45.0% | |
| GGTGGAGAACACCGTAAAAA+AGG | - | chr5.4:11911381-11911400 | MS.gene59336:intron | 45.0% | |
| GTCATCCAATACAGGTTGCT+TGG | - | chr5.4:11909937-11909956 | MS.gene59336:intron | 45.0% | |
| TAAGCAACAGCTGAAACGGT+CGG | + | chr5.4:11912248-11912267 | None:intergenic | 45.0% | |
| TACAGCCAAGCAACCTGTAT+TGG | + | chr5.4:11909945-11909964 | None:intergenic | 45.0% | |
| TAGAACCCAGTGGAATTGGA+TGG | - | chr5.4:11911108-11911127 | MS.gene59336:intron | 45.0% | |
| TATAGAGAGGTGGGAAGAGA+AGG | - | chr5.4:11909282-11909301 | MS.gene59336:intron | 45.0% | |
| TCCTACCTGAATGTCCATGA+AGG | - | chr5.4:11913360-11913379 | MS.gene59336:intron | 45.0% | |
| TCCTGCTGTAGATATCTGGA+TGG | - | chr5.4:11909011-11909030 | MS.gene59336:intron | 45.0% | |
| TGTGTGATTCCTGCATGGTA+TGG | + | chr5.4:11912292-11912311 | None:intergenic | 45.0% | |
| TTCCAGAAAACAGCAGAAGC+TGG | - | chr5.4:11909599-11909618 | MS.gene59336:intron | 45.0% | |
| ! | AAGCGTCGTGCATTTGTTTC+TGG | - | chr5.4:11907579-11907598 | MS.gene59336:intron | 45.0% |
| ! | ACCCCAATTGCTGCATCTTT+TGG | + | chr5.4:11909528-11909547 | None:intergenic | 45.0% |
| ! | ATGCTACTCATCTGAAGCCT+AGG | - | chr5.4:11910172-11910191 | MS.gene59336:intron | 45.0% |
| ! | CAAGCCTTTTCATGATCCGA+AGG | + | chr5.4:11912853-11912872 | None:intergenic | 45.0% |
| ! | GAAGGCTTTTGCTAGCCAAA+AGG | + | chr5.4:11912983-11913002 | None:intergenic | 45.0% |
| ! | GCTTTTGCTAGCCAAAAGGA+TGG | + | chr5.4:11912979-11912998 | None:intergenic | 45.0% |
| ! | TACAGCAAGATCTGAGGTGT+CGG | - | chr5.4:11911311-11911330 | MS.gene59336:intron | 45.0% |
| ! | TATCTGATACGTGTCGACGT+TGG | + | chr5.4:11908222-11908241 | None:intergenic | 45.0% |
| ! | TGCTACTCATCTGAAGCCTA+GGG | - | chr5.4:11910173-11910192 | MS.gene59336:intron | 45.0% |
| !! | AAAGCTTTTGGAAGAGCCAG+AGG | + | chr5.4:11910779-11910798 | None:intergenic | 45.0% |
| !! | AACTTGGTGCAGGTCCTAAA+AGG | - | chr5.4:11913099-11913118 | MS.gene59336:intron | 45.0% |
| !! | CAAAGGATGAAGCACTGCTT+TGG | - | chr5.4:11908914-11908933 | MS.gene59336:CDS | 45.0% |
| !! | CAAGCGAAAGGTGTCTATTG+AGG | - | chr5.4:11910052-11910071 | MS.gene59336:intron | 45.0% |
| !! | CGATGGACGTTATTTTCTGC+AGG | - | chr5.4:11908939-11908958 | MS.gene59336:intron | 45.0% |
| !! | CGTTCATTTTGGGAGACCTT+CGG | - | chr5.4:11912834-11912853 | MS.gene59336:intron | 45.0% |
| !! | GCTGCTTGATTTGCTGAACT+TGG | - | chr5.4:11913083-11913102 | MS.gene59336:intron | 45.0% |
| !! | TGATTTGCTGAACTTGGTGC+AGG | - | chr5.4:11913089-11913108 | MS.gene59336:intron | 45.0% |
| !! | TGTCAAAGAAAGAGCACTCG+TGG | - | chr5.4:11912101-11912120 | MS.gene59336:intron | 45.0% |
| !!! | TCTTTTTGATTCTGGAGCCC+AGG | - | chr5.4:11912668-11912687 | MS.gene59336:intron | 45.0% |
| !!! | TGGAACTGGTTTTCAGAACC+TGG | - | chr5.4:11913720-11913739 | MS.gene59336:intron | 45.0% |
| !! | TTTATAAGATAAAATTAATA+AGG | + | chr5.4:11907830-11907849 | None:intergenic | 5.0% |
| AAGCTGGATCAGCCCATATG+AGG | + | chr5.4:11910697-11910716 | None:intergenic | 50.0% | |
| AATCCCATAGGCCATAGCAC+AGG | + | chr5.4:11913586-11913605 | None:intergenic | 50.0% | |
| AGAAAAGCCCATGTTCGGGA+TGG | - | chr5.4:11911135-11911154 | MS.gene59336:intron | 50.0% | |
| ATAGCCTGTGCTATGGCCTA+TGG | - | chr5.4:11913579-11913598 | MS.gene59336:intron | 50.0% | |
| ATGGAACCGGTCACGGTATT+GGG | - | chr5.4:11913337-11913356 | MS.gene59336:intron | 50.0% | |
| CACATGTGTCAGTGTTGTGC+CGG | - | chr5.4:11908193-11908212 | MS.gene59336:CDS | 50.0% | |
| CACTGTCACAAATGCCAACC+TGG | + | chr5.4:11911710-11911729 | None:intergenic | 50.0% | |
| CCTTGGTCAGCACCTAAACA+AGG | + | chr5.4:11909200-11909219 | None:intergenic | 50.0% | |
| CTAACCGTCGGTAACAGTCA+TGG | + | chr5.4:11913545-11913564 | None:intergenic | 50.0% | |
| GACCACTCAGCAGCAATTCA+TGG | + | chr5.4:11909417-11909436 | None:intergenic | 50.0% | |
| GCCATCCAGATATCTACAGC+AGG | + | chr5.4:11909015-11909034 | None:intergenic | 50.0% | |
| GCTCCATCCTCATAGTAACC+AGG | + | chr5.4:11913741-11913760 | None:intergenic | 50.0% | |
| GCTGCAAGACAACTGCATCA+GGG | + | chr5.4:11910751-11910770 | None:intergenic | 50.0% | |
| GCTTCCATGACTGTTACCGA+CGG | - | chr5.4:11913538-11913557 | MS.gene59336:intron | 50.0% | |
| GGGCCTACTGAGGAAATAGT+AGG | + | chr5.4:11912579-11912598 | None:intergenic | 50.0% | |
| GTCCATGAATTGCTGCTGAG+TGG | - | chr5.4:11909412-11909431 | MS.gene59336:intron | 50.0% | |
| TAGCCTGTGCTATGGCCTAT+GGG | - | chr5.4:11913580-11913599 | MS.gene59336:intron | 50.0% | |
| TATCGACATGGAACCGGTCA+CGG | - | chr5.4:11913330-11913349 | MS.gene59336:intron | 50.0% | |
| TCACACAGCTACAGGTTCTG+TGG | + | chr5.4:11914140-11914159 | None:intergenic | 50.0% | |
| TCAGCAGCAATTCATGGACG+AGG | + | chr5.4:11909411-11909430 | None:intergenic | 50.0% | |
| TGCTGCAAGACAACTGCATC+AGG | + | chr5.4:11910752-11910771 | None:intergenic | 50.0% | |
| TGTCTTGCAGCAATCACCTC+TGG | - | chr5.4:11910760-11910779 | MS.gene59336:CDS | 50.0% | |
| TGTGCTATGGCCTATGGGAT+TGG | - | chr5.4:11913585-11913604 | MS.gene59336:intron | 50.0% | |
| ! | CAGGTTGGCATTTGTGACAG+TGG | - | chr5.4:11911708-11911727 | MS.gene59336:CDS | 50.0% |
| ! | CGGATTGGAAGATGCCACTT+TGG | - | chr5.4:11910433-11910452 | MS.gene59336:intron | 50.0% |
| ! | GCCTAGGGCTGTAAAAGTAC+CGG | - | chr5.4:11910188-11910207 | MS.gene59336:intron | 50.0% |
| ! | TCTGGATTCACTGGAAGTGC+TGG | - | chr5.4:11907597-11907616 | MS.gene59336:intron | 50.0% |
| !! | CCTTGTTTAGGTGCTGACCA+AGG | - | chr5.4:11909197-11909216 | MS.gene59336:intron | 50.0% |
| !!! | GACCAGCTTCTGCTGTTTTC+TGG | + | chr5.4:11909604-11909623 | None:intergenic | 50.0% |
| AGCTGCATTTGGGCCTACTG+AGG | + | chr5.4:11912589-11912608 | None:intergenic | 55.0% | |
| CAGCAATTGGGGTTGACCCT+TGG | - | chr5.4:11909535-11909554 | MS.gene59336:intron | 55.0% | |
| CATGGAACCGGTCACGGTAT+TGG | - | chr5.4:11913336-11913355 | MS.gene59336:intron | 55.0% | |
| GCTCAGGTTAGGACTTACCC+AGG | + | chr5.4:11913859-11913878 | None:intergenic | 55.0% | |
| GTAGGACCCAATACCGTGAC+CGG | + | chr5.4:11913346-11913365 | None:intergenic | 55.0% | |
| ! | GCCGGTACTTTTACAGCCCT+AGG | + | chr5.4:11910192-11910211 | None:intergenic | 55.0% |
| ! | TACGTGTCGACGTTGGACAC+CGG | + | chr5.4:11908215-11908234 | None:intergenic | 55.0% |
| !! | GAAGCACTGCTTTGGACCGA+TGG | - | chr5.4:11908922-11908941 | MS.gene59336:intron | 55.0% |
| AGCCCATGTTCGGGATGGTG+CGG | - | chr5.4:11911140-11911159 | MS.gene59336:intron | 60.0% | |
| AGCCGCACCATCCCGAACAT+GGG | + | chr5.4:11911145-11911164 | None:intergenic | 60.0% | |
| ! | CTTGCACAGGAGCATGCTCG+AGG | - | chr5.4:11909756-11909775 | MS.gene59336:intron | 60.0% |
| CAGCCGCACCATCCCGAACA+TGG | + | chr5.4:11911146-11911165 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 11907336 | 11914159 | 11907336 | ID=MS.gene59336 |
| chr5.4 | mRNA | 11907336 | 11914159 | 11907336 | ID=MS.gene59336.t1;Parent=MS.gene59336 |
| chr5.4 | exon | 11914091 | 11914159 | 11914091 | ID=MS.gene59336.t1.exon1;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11914091 | 11914159 | 11914091 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11913877 | 11913940 | 11913877 | ID=MS.gene59336.t1.exon2;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11913877 | 11913940 | 11913877 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11912457 | 11912596 | 11912457 | ID=MS.gene59336.t1.exon3;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11912457 | 11912596 | 11912457 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11911692 | 11911976 | 11911692 | ID=MS.gene59336.t1.exon4;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11911692 | 11911976 | 11911692 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11911422 | 11911544 | 11911422 | ID=MS.gene59336.t1.exon5;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11911422 | 11911544 | 11911422 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11910693 | 11911004 | 11910693 | ID=MS.gene59336.t1.exon6;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11910693 | 11911004 | 11910693 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11910298 | 11910384 | 11910298 | ID=MS.gene59336.t1.exon7;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11910298 | 11910384 | 11910298 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11910082 | 11910149 | 11910082 | ID=MS.gene59336.t1.exon8;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11910082 | 11910149 | 11910082 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11909454 | 11909520 | 11909454 | ID=MS.gene59336.t1.exon9;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11909454 | 11909520 | 11909454 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11908806 | 11908940 | 11908806 | ID=MS.gene59336.t1.exon10;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11908806 | 11908940 | 11908806 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11908613 | 11908693 | 11908613 | ID=MS.gene59336.t1.exon11;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11908613 | 11908693 | 11908613 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11908330 | 11908384 | 11908330 | ID=MS.gene59336.t1.exon12;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11908330 | 11908384 | 11908330 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11908114 | 11908218 | 11908114 | ID=MS.gene59336.t1.exon13;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11908114 | 11908218 | 11908114 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11907936 | 11908001 | 11907936 | ID=MS.gene59336.t1.exon14;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11907936 | 11908001 | 11907936 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11907635 | 11907759 | 11907635 | ID=MS.gene59336.t1.exon15;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11907635 | 11907759 | 11907635 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| chr5.4 | exon | 11907336 | 11907497 | 11907336 | ID=MS.gene59336.t1.exon16;Parent=MS.gene59336.t1 |
| chr5.4 | CDS | 11907336 | 11907497 | 11907336 | ID=cds.MS.gene59336.t1;Parent=MS.gene59336.t1 |
| Gene Sequence |
| Protein sequence |
