AlfalfaGEDB | MS.gene07486

M. sativa cultivar XinJiangDaYe / MS.gene07486

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02701.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07486.t1	KEH42885.1	95.1	267	7	5	1	266	11	272	1.50E-129	472.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07486.t1	Q43385	42.1	261	99	14	27	266	67	296	9.4e-35	148.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07486.t1	A0A072VMR5	95.1	267	7	5	1	266	11	272	1.1e-129	472.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene07486.t1	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene07486	0.845666	3.52E-59	-1.69E-46
MS.gene049254	MS.gene07486	0.804739	1.87E-49	-1.69E-46
MS.gene049350	MS.gene07486	0.81502	1.14E-51	-1.69E-46
MS.gene049711	MS.gene07486	0.825947	3.55E-54	-1.69E-46
MS.gene049744	MS.gene07486	0.801545	8.56E-49	-1.69E-46
MS.gene049807	MS.gene07486	0.863569	2.27E-64	-1.69E-46
MS.gene050551	MS.gene07486	0.818923	1.52E-52	-1.69E-46
MS.gene051201	MS.gene07486	0.813787	2.14E-51	-1.69E-46
MS.gene051279	MS.gene07486	0.825631	4.22E-54	-1.69E-46
MS.gene051720	MS.gene07486	0.806349	8.59E-50	-1.69E-46
MS.gene051744	MS.gene07486	0.804074	2.57E-49	-1.69E-46
MS.gene052016	MS.gene07486	0.806675	7.33E-50	-1.69E-46
MS.gene052037	MS.gene07486	0.804948	1.69E-49	-1.69E-46
MS.gene052307	MS.gene07486	0.838373	2.99E-57	-1.69E-46
MS.gene052463	MS.gene07486	0.819642	1.04E-52	-1.69E-46
MS.gene052516	MS.gene07486	0.81727	3.60E-52	-1.69E-46
MS.gene052609	MS.gene07486	0.833004	6.84E-56	-1.69E-46
MS.gene053079	MS.gene07486	0.814311	1.64E-51	-1.69E-46
MS.gene053143	MS.gene07486	0.815558	8.69E-52	-1.69E-46
MS.gene053144	MS.gene07486	0.845435	4.07E-59	-1.69E-46
MS.gene053536	MS.gene07486	0.803757	2.99E-49	-1.69E-46
MS.gene053538	MS.gene07486	0.8028	4.72E-49	-1.69E-46
MS.gene054178	MS.gene07486	0.831915	1.27E-55	-1.69E-46
MS.gene054584	MS.gene07486	0.831898	1.29E-55	-1.69E-46
MS.gene054651	MS.gene07486	0.816232	6.15E-52	-1.69E-46
MS.gene055083	MS.gene07486	0.814432	1.54E-51	-1.69E-46
MS.gene055465	MS.gene07486	0.818597	1.80E-52	-1.69E-46
MS.gene055466	MS.gene07486	0.803232	3.85E-49	-1.69E-46
MS.gene055469	MS.gene07486	0.822214	2.67E-53	-1.69E-46
MS.gene055513	MS.gene07486	0.831958	1.24E-55	-1.69E-46
MS.gene055537	MS.gene07486	0.811385	7.19E-51	-1.69E-46
MS.gene055891	MS.gene07486	0.802665	5.04E-49	-1.69E-46
MS.gene056050	MS.gene07486	0.803633	3.18E-49	-1.69E-46
MS.gene056308	MS.gene07486	0.805987	1.02E-49	-1.69E-46
MS.gene056507	MS.gene07486	0.81739	3.38E-52	-1.69E-46
MS.gene05686	MS.gene07486	0.810061	1.39E-50	-1.69E-46
MS.gene057082	MS.gene07486	0.810705	1.01E-50	-1.69E-46
MS.gene057132	MS.gene07486	0.813499	2.48E-51	-1.69E-46
MS.gene058649	MS.gene07486	0.819997	8.66E-53	-1.69E-46
MS.gene058668	MS.gene07486	0.820834	5.56E-53	-1.69E-46
MS.gene05894	MS.gene07486	0.815479	9.05E-52	-1.69E-46
MS.gene059426	MS.gene07486	0.808078	3.69E-50	-1.69E-46
MS.gene059570	MS.gene07486	0.838318	3.09E-57	-1.69E-46
MS.gene059778	MS.gene07486	0.819794	9.63E-53	-1.69E-46
MS.gene059965	MS.gene07486	0.819528	1.11E-52	-1.69E-46
MS.gene061100	MS.gene07486	0.834641	2.67E-56	-1.69E-46
MS.gene061188	MS.gene07486	0.801223	9.96E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07486.t1	MTR_1g077600	95.506	267	6	5	1	266	11	272	0.0	511
MS.gene07486.t1	MTR_1g077600	95.506	267	6	5	1	266	11	272	0.0	510
MS.gene07486.t1	MTR_3g091820	44.828	290	103	14	21	266	30	306	1.53e-59	191
MS.gene07486.t1	MTR_8g027295	44.211	285	110	14	12	266	4	269	1.89e-58	187
MS.gene07486.t1	MTR_2g093220	75.000	72	18	0	17	88	23	94	1.33e-35	129
MS.gene07486.t1	MTR_3g077750	34.000	300	136	15	16	265	41	328	3.42e-34	126
MS.gene07486.t1	MTR_4g461080	47.445	137	65	2	16	145	11	147	2.76e-33	122
MS.gene07486.t1	MTR_8g068210	66.667	72	24	0	23	94	21	92	2.76e-29	113
MS.gene07486.t1	MTR_4g063780	66.667	72	18	1	31	96	72	143	6.14e-29	112
MS.gene07486.t1	MTR_8g079060	54.444	90	36	1	19	103	14	103	7.00e-29	109
MS.gene07486.t1	MTR_3g090430	60.976	82	24	1	14	95	39	112	1.04e-28	111
MS.gene07486.t1	MTR_1g056810	57.292	96	31	2	28	115	6	99	1.04e-28	110
MS.gene07486.t1	MTR_8g015840	65.823	79	23	2	16	94	5	79	1.07e-28	108
MS.gene07486.t1	MTR_3g435480	49.524	105	49	2	36	136	138	242	1.33e-28	113
MS.gene07486.t1	MTR_2g096740	53.261	92	43	0	34	125	62	153	1.58e-28	110
MS.gene07486.t1	MTR_7g024670	74.194	62	16	0	33	94	76	137	1.68e-28	112
MS.gene07486.t1	MTR_2g096740	53.261	92	43	0	34	125	77	168	1.71e-28	110
MS.gene07486.t1	MTR_8g479350	61.972	71	27	0	29	99	63	133	6.53e-28	109
MS.gene07486.t1	MTR_2g014060	67.692	65	16	1	21	85	17	76	6.96e-28	109
MS.gene07486.t1	MTR_4g088580	59.756	82	28	1	36	112	57	138	2.61e-27	108
MS.gene07486.t1	MTR_4g022370	70.690	58	17	0	31	88	79	136	3.90e-27	108
MS.gene07486.t1	MTR_5g031440	74.074	54	14	0	31	84	40	93	3.48e-26	105
MS.gene07486.t1	MTR_4g109980	75.472	53	13	0	32	84	38	90	7.80e-26	103
MS.gene07486.t1	MTR_2g059540	78.000	50	11	0	33	82	30	79	1.24e-25	100
MS.gene07486.t1	MTR_2g013370	57.971	69	28	1	20	88	32	99	1.78e-25	102
MS.gene07486.t1	MTR_4g082060	57.971	69	29	0	18	86	106	174	1.81e-24	102
MS.gene07486.t1	MTR_2g014170	76.000	50	12	0	33	82	44	93	2.32e-24	99.8
MS.gene07486.t1	MTR_6g012450	48.913	92	44	3	28	119	130	218	3.72e-24	101
MS.gene07486.t1	MTR_7g010950	65.517	58	20	0	34	91	135	192	4.45e-24	100
MS.gene07486.t1	MTR_4g089095	66.667	57	18	1	32	88	48	103	9.63e-24	97.8
MS.gene07486.t1	MTR_4g089095	66.667	57	18	1	32	88	14	69	1.29e-23	96.7
MS.gene07486.t1	MTR_7g086780	44.248	113	53	4	14	124	83	187	1.38e-23	99.0
MS.gene07486.t1	MTR_2g016030	63.636	55	20	0	31	85	44	98	2.03e-23	93.6
MS.gene07486.t1	MTR_5g041420	56.944	72	30	1	23	94	128	198	3.55e-23	96.7
MS.gene07486.t1	MTR_8g044220	56.452	62	27	0	28	89	112	173	4.22e-23	97.8
MS.gene07486.t1	MTR_6g027450	50.000	80	35	1	12	86	62	141	1.63e-22	95.1
MS.gene07486.t1	MTR_6g027460	47.561	82	37	2	5	86	73	148	2.10e-22	95.1
MS.gene07486.t1	MTR_5g041530	55.072	69	31	0	21	89	127	195	4.09e-22	94.7
MS.gene07486.t1	MTR_5g041400	66.667	51	17	0	36	86	121	171	2.66e-20	89.4
MS.gene07486.t1	MTR_5g041380	66.667	51	17	0	36	86	129	179	4.20e-20	89.0
MS.gene07486.t1	MTR_7g059400	24.272	309	146	10	7	263	51	323	5.51e-20	88.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07486.t1	AT4G24060	37.685	337	133	13	1	266	11	341	3.78e-47	160
MS.gene07486.t1	AT3G61850	42.960	277	102	15	27	266	55	312	4.13e-47	159
MS.gene07486.t1	AT3G61850	42.960	277	102	15	27	266	67	324	5.81e-47	159
MS.gene07486.t1	AT3G61850	42.692	260	99	14	27	266	55	284	6.58e-47	158
MS.gene07486.t1	AT3G61850	42.692	260	99	14	27	266	55	284	6.58e-47	158
MS.gene07486.t1	AT3G61850	42.692	260	99	14	27	266	67	296	1.10e-46	158
MS.gene07486.t1	AT2G46590	39.871	311	112	16	21	266	57	357	1.00e-38	139
MS.gene07486.t1	AT2G46590	39.871	311	112	16	21	266	69	369	1.10e-38	139
MS.gene07486.t1	AT1G64620	36.795	337	126	14	1	259	11	338	6.79e-37	134
MS.gene07486.t1	AT5G60200	52.885	104	47	1	28	129	49	152	3.40e-33	122
MS.gene07486.t1	AT1G51700	59.756	82	33	0	25	106	24	105	2.06e-31	115
MS.gene07486.t1	AT3G55370	69.118	68	21	0	31	98	73	140	3.26e-30	115
MS.gene07486.t1	AT3G55370	69.118	68	21	0	31	98	73	140	4.04e-30	115
MS.gene07486.t1	AT3G55370	59.756	82	31	1	17	98	106	185	4.11e-30	116
MS.gene07486.t1	AT4G00940	82.759	58	10	0	31	88	65	122	6.14e-30	114
MS.gene07486.t1	AT4G00940	82.759	58	10	0	31	88	65	122	6.14e-30	114
MS.gene07486.t1	AT4G00940	82.759	58	10	0	31	88	65	122	6.14e-30	114
MS.gene07486.t1	AT1G21340	43.590	156	77	5	18	165	19	171	7.71e-30	113
MS.gene07486.t1	AT2G28510	50.820	122	50	2	32	145	46	165	1.68e-29	113
MS.gene07486.t1	AT3G45610	56.322	87	36	2	18	104	25	109	1.77e-29	112
MS.gene07486.t1	AT5G65590	68.657	67	21	0	29	95	36	102	6.02e-29	112
MS.gene07486.t1	AT3G52440	75.410	61	15	0	36	96	27	87	1.35e-28	109
MS.gene07486.t1	AT3G52440	75.410	61	15	0	36	96	46	106	1.90e-28	109
MS.gene07486.t1	AT1G07640	78.182	55	12	0	34	88	21	75	7.68e-28	108
MS.gene07486.t1	AT4G38000	61.538	65	25	0	24	88	31	95	9.33e-28	107
MS.gene07486.t1	AT1G07640	78.182	55	12	0	34	88	77	131	9.34e-28	109
MS.gene07486.t1	AT2G37590	70.000	60	18	0	31	90	86	145	9.57e-28	109
MS.gene07486.t1	AT1G07640	78.182	55	12	0	34	88	85	139	1.24e-27	108
MS.gene07486.t1	AT5G60850	58.108	74	31	0	32	105	49	122	1.47e-27	108
MS.gene07486.t1	AT3G21270	73.684	57	15	0	34	90	29	85	1.97e-27	105
MS.gene07486.t1	AT1G28310	48.624	109	56	0	34	142	27	135	2.20e-27	107
MS.gene07486.t1	AT3G50410	61.429	70	27	0	19	88	15	84	2.48e-27	106
MS.gene07486.t1	AT5G66940	65.152	66	23	0	30	95	28	93	2.75e-27	105
MS.gene07486.t1	AT1G28310	48.624	109	56	0	34	142	51	159	3.36e-27	107
MS.gene07486.t1	AT2G28810	67.213	61	20	0	25	85	68	128	8.15e-27	106
MS.gene07486.t1	AT2G28810	67.213	61	20	0	25	85	85	145	1.24e-26	106
MS.gene07486.t1	AT5G02460	54.430	79	34	1	10	88	73	149	7.35e-26	105
MS.gene07486.t1	AT5G62940	72.131	61	14	1	24	84	66	123	9.61e-26	104
MS.gene07486.t1	AT1G47655	61.538	65	25	0	19	83	14	78	1.23e-25	100
MS.gene07486.t1	AT4G21050	68.333	60	19	0	36	95	26	85	1.62e-24	97.8
MS.gene07486.t1	AT2G34140	49.398	83	38	1	4	86	32	110	2.18e-24	96.3
MS.gene07486.t1	AT1G69570	60.526	76	26	1	18	93	120	191	3.03e-24	100
MS.gene07486.t1	AT1G29160	50.667	75	37	0	13	87	41	115	7.78e-24	95.1
MS.gene07486.t1	AT5G62430	53.947	76	31	1	14	89	38	109	9.39e-24	97.8
MS.gene07486.t1	AT5G39660	43.878	98	51	1	28	125	132	225	1.13e-23	99.8
MS.gene07486.t1	AT5G39660	43.878	98	51	1	28	125	132	225	1.13e-23	99.8
MS.gene07486.t1	AT5G39660	43.878	98	51	1	28	125	132	225	1.13e-23	99.8
MS.gene07486.t1	AT3G47500	63.793	58	21	0	34	91	110	167	2.79e-23	98.6
MS.gene07486.t1	AT1G26790	54.545	77	31	1	10	86	91	163	8.59e-23	96.3
MS.gene07486.t1	AT4G21040	75.510	49	12	0	36	84	27	75	1.00e-22	93.6
MS.gene07486.t1	AT4G21080	75.510	49	12	0	36	84	27	75	5.42e-22	92.0
MS.gene07486.t1	AT4G21030	53.333	60	28	0	36	95	23	82	1.66e-13	67.8

Find 61 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACAATATTGCCTTCTATTAA+TGG	0.125175	1.2:+63165566	None:intergenic
GAAGGCCAAGATCTAAATTT+AGG	0.134252	1.2:-63165215	MS.gene07486:CDS
CTTCTTCATGATGGATCTTA+TGG	0.177246	1.2:+63165234	None:intergenic
CATGATGGATCTTATGGTTT+TGG	0.189658	1.2:+63165240	None:intergenic
GCTTCTTGTTTCTGTTGTTT+TGG	0.223578	1.2:+63165500	None:intergenic
CCCTCACATATCTGATCATT+TGG	0.252769	1.2:-63165189	MS.gene07486:CDS
TGATGGATTTGAAACAAAAT+TGG	0.267429	1.2:+63165292	None:intergenic
TAACCCAACAATATTGGATT+TGG	0.276934	1.2:-63164883	MS.gene07486:CDS
TACAAATAACCCAACAATAT+TGG	0.279491	1.2:-63164889	MS.gene07486:CDS
TTCCTGTTGGTGGTGGTTCT+AGG	0.290051	1.2:-63165346	MS.gene07486:CDS
CCAATGAATTTCTGTTTAGA+TGG	0.293399	1.2:-63165017	MS.gene07486:CDS
TTCATGCCTGCTCAAGTTCA+AGG	0.318142	1.2:-63165074	MS.gene07486:CDS
AAGGATATTCAACAGGGATT+TGG	0.319140	1.2:-63164833	MS.gene07486:CDS
TTCTTCTACTTCTTCAGCAT+TGG	0.346624	1.2:-63165144	MS.gene07486:CDS
TTTGGATCAGAATAATAATA+AGG	0.356949	1.2:-63164865	MS.gene07486:CDS
GGAACCCTAAATTTAGATCT+TGG	0.357337	1.2:+63165210	None:intergenic
AAGGCCAAGATCTAAATTTA+GGG	0.366987	1.2:-63165214	MS.gene07486:CDS
GATCAACAAGGATATTCAAC+AGG	0.388223	1.2:-63164840	MS.gene07486:CDS
TTTGGCTTCCTTTCCAACAT+AGG	0.393371	1.2:+63165518	None:intergenic
GATCCAAATCCAATATTGTT+GGG	0.402423	1.2:+63164880	None:intergenic
GCAAAACATGTAGAAGGTAT+TGG	0.410442	1.2:-63165394	MS.gene07486:CDS
GATCTTGGCCTTCTTCATGA+TGG	0.411783	1.2:+63165225	None:intergenic
CAGGTTTGAGTTCAAGTTCA+AGG	0.413495	1.2:-63165109	MS.gene07486:CDS
TTCTGTTTAGATGGGATCTC+AGG	0.420885	1.2:-63165008	MS.gene07486:CDS
ACCAACAGGAATGTTTCTAA+TGG	0.426405	1.2:+63165358	None:intergenic
GGGATTTGGACTGGAATGTT+GGG	0.441281	1.2:-63164819	MS.gene07486:CDS
CCTGCTCAAGTTCAAGGTTG+TGG	0.443611	1.2:-63165068	MS.gene07486:CDS
TTCCTAGAACCACCACCAAC+AGG	0.444902	1.2:+63165344	None:intergenic
CCATCTAAACAGAAATTCAT+TGG	0.447886	1.2:+63165017	None:intergenic
ACTGGAATGTTGGGAGGAGG+AGG	0.456613	1.2:-63164810	MS.gene07486:CDS
ATTTCTGCAAAACATGTAGA+AGG	0.460389	1.2:-63165400	MS.gene07486:CDS
GCATTGGAGCTTCTTACTGC+AGG	0.462786	1.2:-63165128	MS.gene07486:CDS
TGATCCAAATCCAATATTGT+TGG	0.463007	1.2:+63164879	None:intergenic
AGGGATTTGGACTGGAATGT+TGG	0.470831	1.2:-63164820	MS.gene07486:CDS
CAATGAATTTCTGTTTAGAT+GGG	0.475119	1.2:-63165016	MS.gene07486:CDS
TGGACTGGAATGTTGGGAGG+AGG	0.475312	1.2:-63164813	MS.gene07486:CDS
GGAATGTTGGGAGGAGGAGG+AGG	0.484270	1.2:-63164807	MS.gene07486:CDS
ACATGTTTCAAATCCTCAAA+AGG	0.498889	1.2:+63164918	None:intergenic
CATAAGATCCATCATGAAGA+AGG	0.500791	1.2:-63165233	MS.gene07486:CDS
AGAAACATTCCTGTTGGTGG+TGG	0.512070	1.2:-63165353	MS.gene07486:CDS
AAGAGACAATTAGTGAAGGA+AGG	0.513089	1.2:-63164950	MS.gene07486:CDS
TATTCAACAGGGATTTGGAC+TGG	0.519358	1.2:-63164828	MS.gene07486:CDS
ATTAGAAACATTCCTGTTGG+TGG	0.530061	1.2:-63165356	MS.gene07486:CDS
AGAGACAATTAGTGAAGGAA+GGG	0.538775	1.2:-63164949	MS.gene07486:CDS
CCACAACCTTGAACTTGAGC+AGG	0.540402	1.2:+63165068	None:intergenic
AGGTTTGAGTTCAAGTTCAA+GGG	0.544319	1.2:-63165108	MS.gene07486:CDS
TCCATTAGAAACATTCCTGT+TGG	0.554777	1.2:-63165359	MS.gene07486:CDS
AAGAAGCAATTAACTGTCCA+AGG	0.557523	1.2:-63165484	MS.gene07486:CDS
TGTAGAAGGTATTGGACTCA+AGG	0.565800	1.2:-63165386	MS.gene07486:CDS
ATGGTGAAGCCATTAATAGA+AGG	0.568853	1.2:-63165575	MS.gene07486:CDS
TTAGATGGGATCTCAGGAAG+TGG	0.574889	1.2:-63165002	MS.gene07486:CDS
TATGCAAGTACTCTTGATCA+TGG	0.590246	1.2:-63164978	MS.gene07486:CDS
GTGTTAATTGAATTACACCT+TGG	0.593541	1.2:+63165467	None:intergenic
ATTTGGACTGGAATGTTGGG+AGG	0.599027	1.2:-63164816	MS.gene07486:CDS
ACTTGCTTAAAATCTTGCAA+AGG	0.603902	1.2:+63165041	None:intergenic
CCAAATGATCAGATATGTGA+GGG	0.610063	1.2:+63165189	None:intergenic
ACCAAATGATCAGATATGTG+AGG	0.628381	1.2:+63165188	None:intergenic
GTTCAAGAGACAATTAGTGA+AGG	0.630784	1.2:-63164954	MS.gene07486:CDS
AGAAGGTATTGGACTCAAGG+TGG	0.674278	1.2:-63165383	MS.gene07486:CDS
AATAATAAGGAAGATCAACA+AGG	0.712044	1.2:-63164852	MS.gene07486:CDS
ATCAACAAGGATATTCAACA+GGG	0.718207	1.2:-63164839	MS.gene07486:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTGGATCAGAATAATAATA+AGG	-	chr1.2:63165507-63165526	MS.gene07486:CDS	20.0%
!	AATAATAAGGAAGATCAACA+AGG	-	chr1.2:63165520-63165539	MS.gene07486:CDS	25.0%
!	ACAATATTGCCTTCTATTAA+TGG	+	chr1.2:63164809-63164828	None:intergenic	25.0%
!	CAATGAATTTCTGTTTAGAT+GGG	-	chr1.2:63165356-63165375	MS.gene07486:CDS	25.0%
!	TACAAATAACCCAACAATAT+TGG	-	chr1.2:63165483-63165502	MS.gene07486:CDS	25.0%
!!!	TCAAGTATGTTTTTTGTTGA+AGG	+	chr1.2:63165106-63165125	None:intergenic	25.0%
!!!	TGATGGATTTGAAACAAAAT+TGG	+	chr1.2:63165083-63165102	None:intergenic	25.0%
	AAGGCCAAGATCTAAATTTA+GGG	-	chr1.2:63165158-63165177	MS.gene07486:CDS	30.0%
	ACATGTTTCAAATCCTCAAA+AGG	+	chr1.2:63165457-63165476	None:intergenic	30.0%
	ACTTGCTTAAAATCTTGCAA+AGG	+	chr1.2:63165334-63165353	None:intergenic	30.0%
	ATCAACAAGGATATTCAACA+GGG	-	chr1.2:63165533-63165552	MS.gene07486:CDS	30.0%
	ATTTCTGCAAAACATGTAGA+AGG	-	chr1.2:63164972-63164991	MS.gene07486:CDS	30.0%
	CCAATGAATTTCTGTTTAGA+TGG	-	chr1.2:63165355-63165374	MS.gene07486:CDS	30.0%
	CCATCTAAACAGAAATTCAT+TGG	+	chr1.2:63165358-63165377	None:intergenic	30.0%
	GATCCAAATCCAATATTGTT+GGG	+	chr1.2:63165495-63165514	None:intergenic	30.0%
	GTGTTAATTGAATTACACCT+TGG	+	chr1.2:63164908-63164927	None:intergenic	30.0%
	TAACCCAACAATATTGGATT+TGG	-	chr1.2:63165489-63165508	MS.gene07486:CDS	30.0%
	TACATGTGAAAAACCTATGT+TGG	-	chr1.2:63164841-63164860	MS.gene07486:CDS	30.0%
	TGATCCAAATCCAATATTGT+TGG	+	chr1.2:63165496-63165515	None:intergenic	30.0%
!	CATGTTTTGCAGAAATATCT+TGG	+	chr1.2:63164968-63164987	None:intergenic	30.0%
!!!	ATGTTTTTTGTTGAAGGTGA+TGG	+	chr1.2:63165100-63165119	None:intergenic	30.0%
	AAGAAGCAATTAACTGTCCA+AGG	-	chr1.2:63164888-63164907	MS.gene07486:CDS	35.0%
	AAGAGACAATTAGTGAAGGA+AGG	-	chr1.2:63165422-63165441	MS.gene07486:CDS	35.0%
	AAGGATATTCAACAGGGATT+TGG	-	chr1.2:63165539-63165558	MS.gene07486:CDS	35.0%
	ACCAAATGATCAGATATGTG+AGG	+	chr1.2:63165187-63165206	None:intergenic	35.0%
	AGAGACAATTAGTGAAGGAA+GGG	-	chr1.2:63165423-63165442	MS.gene07486:CDS	35.0%
	ATGGTGAAGCCATTAATAGA+AGG	-	chr1.2:63164797-63164816	MS.gene07486:CDS	35.0%
	ATTAGAAACATTCCTGTTGG+TGG	-	chr1.2:63165016-63165035	MS.gene07486:CDS	35.0%
	CATAAGATCCATCATGAAGA+AGG	-	chr1.2:63165139-63165158	MS.gene07486:CDS	35.0%
	CCAAATGATCAGATATGTGA+GGG	+	chr1.2:63165186-63165205	None:intergenic	35.0%
	GAAGGCCAAGATCTAAATTT+AGG	-	chr1.2:63165157-63165176	MS.gene07486:CDS	35.0%
	GATCAACAAGGATATTCAAC+AGG	-	chr1.2:63165532-63165551	MS.gene07486:CDS	35.0%
	GGAACCCTAAATTTAGATCT+TGG	+	chr1.2:63165165-63165184	None:intergenic	35.0%
	GTGAAAAACCTATGTTGGAA+AGG	-	chr1.2:63164846-63164865	MS.gene07486:CDS	35.0%
	GTTCAAGAGACAATTAGTGA+AGG	-	chr1.2:63165418-63165437	MS.gene07486:CDS	35.0%
	TATGCAAGTACTCTTGATCA+TGG	-	chr1.2:63165394-63165413	MS.gene07486:CDS	35.0%
	TCCATTAGAAACATTCCTGT+TGG	-	chr1.2:63165013-63165032	MS.gene07486:CDS	35.0%
	TTCTTCTACTTCTTCAGCAT+TGG	-	chr1.2:63165228-63165247	MS.gene07486:CDS	35.0%
!	ACCAACAGGAATGTTTCTAA+TGG	+	chr1.2:63165017-63165036	None:intergenic	35.0%
!	AGGTTTGAGTTCAAGTTCAA+GGG	-	chr1.2:63165264-63165283	MS.gene07486:CDS	35.0%
!	GCAAAACATGTAGAAGGTAT+TGG	-	chr1.2:63164978-63164997	MS.gene07486:CDS	35.0%
!!	CTTCTTCATGATGGATCTTA+TGG	+	chr1.2:63165141-63165160	None:intergenic	35.0%
!!!	AAGGGTTTTGTTTCCTTTTG+AGG	-	chr1.2:63165441-63165460	MS.gene07486:CDS	35.0%
!!!	CATGATGGATCTTATGGTTT+TGG	+	chr1.2:63165135-63165154	None:intergenic	35.0%
!!!	GCTTCTTGTTTCTGTTGTTT+TGG	+	chr1.2:63164875-63164894	None:intergenic	35.0%
	CCCTCACATATCTGATCATT+TGG	-	chr1.2:63165183-63165202	MS.gene07486:CDS	40.0%
	TATTCAACAGGGATTTGGAC+TGG	-	chr1.2:63165544-63165563	MS.gene07486:CDS	40.0%
	TTCTGTTTAGATGGGATCTC+AGG	-	chr1.2:63165364-63165383	MS.gene07486:CDS	40.0%
!	CAGGTTTGAGTTCAAGTTCA+AGG	-	chr1.2:63165263-63165282	MS.gene07486:CDS	40.0%
!	TTTGGCTTCCTTTCCAACAT+AGG	+	chr1.2:63164857-63164876	None:intergenic	40.0%
!!	TGTAGAAGGTATTGGACTCA+AGG	-	chr1.2:63164986-63165005	MS.gene07486:CDS	40.0%
	TTAGATGGGATCTCAGGAAG+TGG	-	chr1.2:63165370-63165389	MS.gene07486:CDS	45.0%
	TTCATGCCTGCTCAAGTTCA+AGG	-	chr1.2:63165298-63165317	MS.gene07486:CDS	45.0%
!	AGAAACATTCCTGTTGGTGG+TGG	-	chr1.2:63165019-63165038	MS.gene07486:CDS	45.0%
!	AGGGATTTGGACTGGAATGT+TGG	-	chr1.2:63165552-63165571	MS.gene07486:CDS	45.0%
!	ATTTGGACTGGAATGTTGGG+AGG	-	chr1.2:63165556-63165575	MS.gene07486:CDS	45.0%
!	GATCTTGGCCTTCTTCATGA+TGG	+	chr1.2:63165150-63165169	None:intergenic	45.0%
!	GGGATTTGGACTGGAATGTT+GGG	-	chr1.2:63165553-63165572	MS.gene07486:CDS	45.0%
!!	AGAAGGTATTGGACTCAAGG+TGG	-	chr1.2:63164989-63165008	MS.gene07486:CDS	45.0%
	CCACAACCTTGAACTTGAGC+AGG	+	chr1.2:63165307-63165326	None:intergenic	50.0%
	CCTGCTCAAGTTCAAGGTTG+TGG	-	chr1.2:63165304-63165323	MS.gene07486:CDS	50.0%
	GCATTGGAGCTTCTTACTGC+AGG	-	chr1.2:63165244-63165263	MS.gene07486:CDS	50.0%
	TTCCTAGAACCACCACCAAC+AGG	+	chr1.2:63165031-63165050	None:intergenic	50.0%
!!	TTCCTGTTGGTGGTGGTTCT+AGG	-	chr1.2:63165026-63165045	MS.gene07486:CDS	50.0%
	ACTGGAATGTTGGGAGGAGG+AGG	-	chr1.2:63165562-63165581	MS.gene07486:CDS	55.0%
!	TGGACTGGAATGTTGGGAGG+AGG	-	chr1.2:63165559-63165578	MS.gene07486:CDS	55.0%
	GGAATGTTGGGAGGAGGAGG+AGG	-	chr1.2:63165565-63165584	MS.gene07486:CDS	60.0%
	TGGGAGGAGGAGGAGGATCA+TGG	-	chr1.2:63165572-63165591	MS.gene07486:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	63164797	63165597	63164797	ID=MS.gene07486
chr1.2	mRNA	63164797	63165597	63164797	ID=MS.gene07486.t1;Parent=MS.gene07486
chr1.2	exon	63164797	63165597	63164797	ID=MS.gene07486.t1.exon1;Parent=MS.gene07486.t1
chr1.2	CDS	63164797	63165597	63164797	ID=cds.MS.gene07486.t1;Parent=MS.gene07486.t1

Gene Sequence

>MS.gene07486

ATGGTGAAGCCATTAATAGAAGGCAATATTGTAGTAGCAACAAATACATGTGAAAAACCTATGTTGGAAAGGAAGCCAAAACAACAGAAACAAGAAGCAATTAACTGTCCAAGGTGTAATTCAATTAACACAAAATTCTGTTACTACAACAACTATAGTTTGACACAACCAAGATATTTCTGCAAAACATGTAGAAGGTATTGGACTCAAGGTGGATCCATTAGAAACATTCCTGTTGGTGGTGGTTCTAGGAAAAACAACAAAAATAGATCTTCTAATTCTTCCAATTTTGTTTCAAATCCATCACCTTCAACAAAAAACATACTTGATGAAAACCAAAACCATAAGATCCATCATGAAGAAGGCCAAGATCTAAATTTAGGGTTCCCTCACATATCTGATCATTTGGTTCAGCAAAATAACAACACTTCTTCTTCTACTTCTTCAGCATTGGAGCTTCTTACTGCAGGTTTGAGTTCAAGTTCAAGGGATTTGCATTCTTTCATGCCTGCTCAAGTTCAAGGTTGTGGATTTCCTTTGCAAGATTTTAAGCAAGTGCCAATGAATTTCTGTTTAGATGGGATCTCAGGAAGTGGTTATGCAAGTACTCTTGATCATGGTGTTCAAGAGACAATTAGTGAAGGAAGGGTTTTGTTTCCTTTTGAGGATTTGAAACATGTTTCTAGTACAAATAACCCAACAATATTGGATTTGGATCAGAATAATAATAAGGAAGATCAACAAGGATATTCAACAGGGATTTGGACTGGAATGTTGGGAGGAGGAGGAGGATCATGGTAA

Protein sequence

>MS.gene07486.t1

MVKPLIEGNIVVATNTCEKPMLERKPKQQKQEAINCPRCNSINTKFCYYNNYSLTQPRYFCKTCRRYWTQGGSIRNIPVGGGSRKNNKNRSSNSSNFVSNPSPSTKNILDENQNHKIHHEEGQDLNLGFPHISDHLVQQNNNTSSSTSSALELLTAGLSSSSRDLHSFMPAQVQGCGFPLQDFKQVPMNFCLDGISGSGYASTLDHGVQETISEGRVLFPFEDLKHVSSTNNPTILDLDQNNNKEDQQGYSTGIWTGMLGGGGGSW