Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09021.t1 | XP_013446582.1 | 97.9 | 970 | 20 | 0 | 1 | 970 | 1 | 970 | 0.00E+00 | 1873.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09021.t1 | Q9C5U1 | 68.1 | 982 | 288 | 7 | 1 | 969 | 61 | 1030 | 0.0e+00 | 1294.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09021.t1 | A0A072TSW4 | 97.9 | 970 | 20 | 0 | 1 | 970 | 1 | 970 | 0.0e+00 | 1873.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene09021.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene09021 | 0.809289 | 2.04E-50 | -1.69E-46 |
| MS.gene049368 | MS.gene09021 | 0.823586 | 1.28E-53 | -1.69E-46 |
| MS.gene049411 | MS.gene09021 | 0.815603 | 8.50E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene09021 | 0.802922 | 4.46E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene09021 | 0.809814 | 1.57E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene09021 | 0.82332 | 1.48E-53 | -1.69E-46 |
| MS.gene050386 | MS.gene09021 | 0.808041 | 3.76E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene09021 | 0.835365 | 1.75E-56 | -1.69E-46 |
| MS.gene050646 | MS.gene09021 | 0.810964 | 8.87E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene09021 | 0.817083 | 3.96E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene09021 | 0.807717 | 4.41E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene09021 | 0.824104 | 9.67E-54 | -1.69E-46 |
| MS.gene051381 | MS.gene09021 | 0.811937 | 5.45E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene09021 | 0.859338 | 4.43E-63 | -1.69E-46 |
| MS.gene052307 | MS.gene09021 | 0.829357 | 5.38E-55 | -1.69E-46 |
| MS.gene052463 | MS.gene09021 | 0.80209 | 6.62E-49 | -1.69E-46 |
| MS.gene052514 | MS.gene09021 | 0.81852 | 1.88E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene09021 | 0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene09021 | 0.81754 | 3.13E-52 | -1.69E-46 |
| MS.gene053272 | MS.gene09021 | -0.81969 | 1.02E-52 | -1.69E-46 |
| MS.gene053541 | MS.gene09021 | 0.808413 | 3.14E-50 | -1.69E-46 |
| MS.gene053542 | MS.gene09021 | 0.815569 | 8.64E-52 | -1.69E-46 |
| MS.gene054004 | MS.gene09021 | 0.812948 | 3.28E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene09021 | 0.801108 | 1.05E-48 | -1.69E-46 |
| MS.gene05458 | MS.gene09021 | 0.8132 | 2.89E-51 | -1.69E-46 |
| MS.gene055221 | MS.gene09021 | 0.80909 | 2.25E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene09021 | 0.818574 | 1.83E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene09021 | 0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene09021 | 0.808299 | 3.32E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene09021 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene09021 | 0.857185 | 1.94E-62 | -1.69E-46 |
| MS.gene058781 | MS.gene09021 | 0.81274 | 3.64E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene09021 | 0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene059778 | MS.gene09021 | 0.833924 | 4.03E-56 | -1.69E-46 |
| MS.gene060343 | MS.gene09021 | -0.81304 | 3.13E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene09021 | 0.82753 | 1.49E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene09021 | 0.837378 | 5.39E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene09021 | 0.848839 | 4.75E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene09021 | 0.836899 | 7.14E-57 | -1.69E-46 |
| MS.gene061160 | MS.gene09021 | 0.8037 | 3.08E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09021 | MS.gene58351 | PPI |
| MS.gene09021 | MS.gene059778 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09021.t1 | MTR_8g080770 | 97.938 | 970 | 20 | 0 | 1 | 970 | 1 | 970 | 0.0 | 1976 |
| MS.gene09021.t1 | MTR_8g080770 | 97.907 | 860 | 18 | 0 | 111 | 970 | 2 | 861 | 0.0 | 1747 |
| MS.gene09021.t1 | MTR_3g085130 | 80.102 | 980 | 184 | 5 | 1 | 970 | 56 | 1034 | 0.0 | 1606 |
| MS.gene09021.t1 | MTR_3g085130 | 79.394 | 825 | 159 | 5 | 156 | 970 | 1 | 824 | 0.0 | 1332 |
| MS.gene09021.t1 | MTR_5g097410 | 53.737 | 990 | 393 | 15 | 19 | 967 | 247 | 1212 | 0.0 | 1034 |
| MS.gene09021.t1 | MTR_8g106150 | 52.462 | 995 | 396 | 17 | 25 | 967 | 25 | 994 | 0.0 | 974 |
| MS.gene09021.t1 | MTR_8g106150 | 52.128 | 752 | 304 | 15 | 263 | 967 | 9 | 751 | 0.0 | 713 |
| MS.gene09021.t1 | MTR_2g067240 | 52.581 | 310 | 85 | 4 | 201 | 508 | 1 | 250 | 4.80e-94 | 298 |
| MS.gene09021.t1 | MTR_3g105590 | 36.957 | 276 | 163 | 4 | 395 | 661 | 373 | 646 | 5.32e-40 | 160 |
| MS.gene09021.t1 | MTR_5g022470 | 33.750 | 320 | 188 | 6 | 345 | 657 | 462 | 764 | 3.20e-38 | 155 |
| MS.gene09021.t1 | MTR_5g022470 | 33.750 | 320 | 188 | 6 | 345 | 657 | 462 | 764 | 3.39e-38 | 155 |
| MS.gene09021.t1 | MTR_5g022470 | 34.722 | 144 | 62 | 2 | 838 | 955 | 1047 | 1184 | 1.10e-17 | 89.4 |
| MS.gene09021.t1 | MTR_1g013360 | 33.882 | 304 | 163 | 6 | 395 | 661 | 379 | 681 | 5.42e-38 | 154 |
| MS.gene09021.t1 | MTR_1g013360 | 33.333 | 129 | 67 | 3 | 843 | 953 | 870 | 997 | 5.66e-12 | 70.5 |
| MS.gene09021.t1 | MTR_8g075340 | 34.603 | 315 | 192 | 5 | 345 | 657 | 424 | 726 | 1.27e-36 | 150 |
| MS.gene09021.t1 | MTR_8g075340 | 36.296 | 135 | 63 | 3 | 838 | 955 | 1026 | 1154 | 1.04e-17 | 89.4 |
| MS.gene09021.t1 | MTR_4g031150 | 28.650 | 363 | 222 | 6 | 383 | 742 | 384 | 712 | 1.90e-34 | 142 |
| MS.gene09021.t1 | MTR_4g031150 | 32.624 | 141 | 78 | 5 | 820 | 959 | 649 | 773 | 7.44e-12 | 70.1 |
| MS.gene09021.t1 | MTR_1g087140 | 30.476 | 315 | 182 | 10 | 381 | 674 | 378 | 676 | 1.85e-29 | 127 |
| MS.gene09021.t1 | MTR_1g087140 | 32.609 | 138 | 69 | 6 | 838 | 964 | 970 | 1094 | 1.90e-13 | 75.5 |
| MS.gene09021.t1 | MTR_7g109150 | 30.357 | 280 | 162 | 4 | 383 | 661 | 335 | 582 | 4.63e-28 | 121 |
| MS.gene09021.t1 | MTR_5g044100 | 59.184 | 98 | 38 | 1 | 816 | 911 | 125 | 222 | 6.65e-28 | 113 |
| MS.gene09021.t1 | MTR_1g090850 | 26.000 | 350 | 208 | 10 | 344 | 666 | 328 | 653 | 2.70e-24 | 110 |
| MS.gene09021.t1 | MTR_1g090850 | 37.692 | 130 | 64 | 4 | 841 | 963 | 926 | 1045 | 2.87e-15 | 81.3 |
| MS.gene09021.t1 | MTR_7g116330 | 33.562 | 146 | 84 | 4 | 826 | 970 | 628 | 761 | 2.14e-17 | 87.8 |
| MS.gene09021.t1 | MTR_7g116330 | 21.542 | 441 | 290 | 11 | 371 | 804 | 354 | 745 | 1.74e-14 | 78.6 |
| MS.gene09021.t1 | MTR_1g079790 | 33.835 | 133 | 78 | 3 | 840 | 970 | 634 | 758 | 1.26e-15 | 82.0 |
| MS.gene09021.t1 | MTR_1g079790 | 25.595 | 168 | 125 | 0 | 371 | 538 | 350 | 517 | 3.52e-12 | 70.9 |
| MS.gene09021.t1 | MTR_1g073840 | 32.331 | 133 | 81 | 3 | 837 | 968 | 631 | 755 | 9.81e-15 | 79.3 |
| MS.gene09021.t1 | MTR_1g073840 | 21.158 | 449 | 310 | 11 | 371 | 815 | 344 | 752 | 2.43e-11 | 68.2 |
| MS.gene09021.t1 | MTR_1g044210 | 31.579 | 133 | 81 | 3 | 837 | 967 | 633 | 757 | 2.50e-13 | 74.7 |
| MS.gene09021.t1 | MTR_1g079790 | 25.595 | 168 | 125 | 0 | 371 | 538 | 350 | 517 | 3.97e-12 | 70.5 |
| MS.gene09021.t1 | MTR_8g019680 | 41.463 | 82 | 36 | 3 | 882 | 963 | 77 | 146 | 4.89e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09021.t1 | AT1G27320 | 68.126 | 982 | 288 | 7 | 1 | 969 | 61 | 1030 | 0.0 | 1340 |
| MS.gene09021.t1 | AT5G35750 | 54.941 | 1012 | 392 | 12 | 5 | 967 | 177 | 1173 | 0.0 | 1068 |
| MS.gene09021.t1 | AT2G01830 | 52.984 | 972 | 398 | 14 | 31 | 967 | 113 | 1060 | 0.0 | 988 |
| MS.gene09021.t1 | AT2G01830 | 52.984 | 972 | 398 | 14 | 31 | 967 | 124 | 1071 | 0.0 | 987 |
| MS.gene09021.t1 | AT2G01830 | 52.984 | 972 | 398 | 14 | 31 | 967 | 101 | 1048 | 0.0 | 987 |
| MS.gene09021.t1 | AT2G01830 | 52.984 | 972 | 398 | 14 | 31 | 967 | 101 | 1048 | 0.0 | 987 |
| MS.gene09021.t1 | AT2G01830 | 52.984 | 972 | 398 | 14 | 31 | 967 | 101 | 1048 | 0.0 | 987 |
| MS.gene09021.t1 | AT2G01830 | 52.984 | 972 | 398 | 14 | 31 | 967 | 101 | 1048 | 0.0 | 987 |
| MS.gene09021.t1 | AT5G10720 | 35.252 | 278 | 145 | 3 | 395 | 668 | 369 | 615 | 8.38e-42 | 166 |
| MS.gene09021.t1 | AT5G10720 | 32.414 | 145 | 78 | 3 | 842 | 968 | 779 | 921 | 1.05e-13 | 76.3 |
| MS.gene09021.t1 | AT1G66340 | 29.108 | 426 | 255 | 8 | 383 | 804 | 334 | 716 | 2.14e-38 | 154 |
| MS.gene09021.t1 | AT1G66340 | 29.167 | 120 | 78 | 2 | 840 | 959 | 609 | 721 | 4.07e-11 | 67.4 |
| MS.gene09021.t1 | AT2G17820 | 30.233 | 387 | 244 | 8 | 345 | 728 | 451 | 814 | 1.27e-36 | 150 |
| MS.gene09021.t1 | AT2G17820 | 33.333 | 150 | 62 | 3 | 838 | 955 | 1041 | 1184 | 3.47e-15 | 81.3 |
| MS.gene09021.t1 | AT2G40940 | 32.143 | 280 | 157 | 4 | 383 | 661 | 334 | 581 | 8.35e-31 | 129 |
| MS.gene09021.t1 | AT2G47430 | 31.126 | 302 | 179 | 8 | 380 | 666 | 383 | 670 | 5.53e-29 | 125 |
| MS.gene09021.t1 | AT2G47430 | 37.594 | 133 | 59 | 5 | 836 | 952 | 981 | 1105 | 8.92e-14 | 76.6 |
| MS.gene09021.t1 | AT3G04580 | 34.286 | 140 | 81 | 3 | 828 | 965 | 629 | 759 | 1.88e-15 | 81.6 |
| MS.gene09021.t1 | AT3G04580 | 21.711 | 456 | 292 | 14 | 379 | 817 | 354 | 761 | 1.17e-12 | 72.8 |
| MS.gene09021.t1 | AT3G04580 | 34.286 | 140 | 81 | 3 | 828 | 965 | 629 | 759 | 1.88e-15 | 81.6 |
| MS.gene09021.t1 | AT3G04580 | 21.711 | 456 | 292 | 14 | 379 | 817 | 354 | 761 | 1.17e-12 | 72.8 |
| MS.gene09021.t1 | AT3G23150 | 35.252 | 139 | 74 | 3 | 837 | 970 | 642 | 769 | 6.79e-15 | 79.7 |
Find 189 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAACTTTGGTGACCCTTTC+AGG | 0.130440 | 4.4:-15313665 | MS.gene09021:CDS |
| ATTGCATACCCATCCATTTC+TGG | 0.150261 | 4.4:+15311153 | None:intergenic |
| AACTGCATTCCCTTTGTTTA+TGG | 0.188548 | 4.4:+15311644 | None:intergenic |
| ATTTCTGTTGATATGCTTTC+TGG | 0.198728 | 4.4:-15315016 | MS.gene09021:CDS |
| GATCAGGCAAAGATTGAATT+TGG | 0.209090 | 4.4:-15313001 | MS.gene09021:CDS |
| GTCACTTATAAATGAGGTTT+TGG | 0.260867 | 4.4:-15313023 | MS.gene09021:CDS |
| ATTCTAATTGTTGATGATAA+TGG | 0.264746 | 4.4:-15311312 | MS.gene09021:CDS |
| AGGGATGATGCATATGCTTA+TGG | 0.272594 | 4.4:-15313113 | MS.gene09021:CDS |
| CAACAGTACTGTCAGTATAT+TGG | 0.273915 | 4.4:-15315857 | MS.gene09021:CDS |
| GGCCTCATGAATGGCGAAAT+TGG | 0.276640 | 4.4:-15311918 | MS.gene09021:CDS |
| GGAACAAGAGAACTCTAAAT+AGG | 0.280932 | 4.4:-15311380 | MS.gene09021:CDS |
| TCTCATGGGCAACTCAATTA+AGG | 0.288486 | 4.4:-15312693 | MS.gene09021:intron |
| CTTGTTATTGCTCTCCTTGT+TGG | 0.291084 | 4.4:-15313478 | MS.gene09021:CDS |
| ATGTATGGCTCAAATATATC+AGG | 0.301140 | 4.4:-15313714 | MS.gene09021:CDS |
| GGATCACCTATTAGCAGTTT+AGG | 0.310227 | 4.4:+15312743 | None:intergenic |
| TCTCTTAGCCATCTTCTTGT+TGG | 0.315553 | 4.4:-15311342 | MS.gene09021:CDS |
| CTCTTAGCCATCTTCTTGTT+GGG | 0.318317 | 4.4:-15311341 | MS.gene09021:CDS |
| CGATTATGCTGTAGAGGAAT+TGG | 0.327475 | 4.4:-15315104 | MS.gene09021:CDS |
| TCAGTTCGACGCATGTTTCA+TGG | 0.329522 | 4.4:-15311187 | MS.gene09021:CDS |
| GTTGCTTGAATCCTTTCATT+TGG | 0.333595 | 4.4:+15314523 | None:intergenic |
| TCATCGGTGTTCTGATTTCA+TGG | 0.354261 | 4.4:+15313247 | None:intergenic |
| AACAGTACTGTCAGTATATT+GGG | 0.360120 | 4.4:-15315856 | MS.gene09021:CDS |
| ATTGGAGCCATCCCCTCTTC+AGG | 0.361853 | 4.4:-15315086 | MS.gene09021:CDS |
| GGATATTCAAATGCCAGAAA+TGG | 0.363538 | 4.4:-15311166 | MS.gene09021:CDS |
| CCTGAGTTGGAAAGGATTCA+AGG | 0.368177 | 4.4:-15312147 | MS.gene09021:CDS |
| AAATAGACATAGCTTGAATA+TGG | 0.369912 | 4.4:+15315645 | None:intergenic |
| GCATAATCGTTCTTATGAAC+TGG | 0.371534 | 4.4:+15315118 | None:intergenic |
| CAAGTTCCTAAACTGCTAAT+AGG | 0.375479 | 4.4:-15312749 | MS.gene09021:CDS |
| GAAAGGATTCAAGCAACTAA+TGG | 0.381749 | 4.4:-15314517 | MS.gene09021:CDS |
| AACTTTATCGGGAAGTTTCT+CGG | 0.392394 | 4.4:-15310620 | MS.gene09021:CDS |
| ACACAGAAGTATCTATAAAC+TGG | 0.396943 | 4.4:-15310749 | MS.gene09021:CDS |
| TCATTTGGAGTTGCATTTGA+TGG | 0.397149 | 4.4:+15314538 | None:intergenic |
| ATTATTTGCCGAAACCTTCC+AGG | 0.397385 | 4.4:+15312722 | None:intergenic |
| TTTGAGCCATACATGGCAAT+TGG | 0.398441 | 4.4:+15313723 | None:intergenic |
| GTGTTGCGTGCAAGAGAATC+AGG | 0.399039 | 4.4:-15314649 | MS.gene09021:CDS |
| TTGAAGCCGAACAACTTTAT+CGG | 0.400783 | 4.4:-15310632 | MS.gene09021:CDS |
| GGAAACATGAGATGCATTGC+AGG | 0.401426 | 4.4:-15313644 | MS.gene09021:intron |
| GATGACTGCAGATGTAATTC+AGG | 0.412226 | 4.4:-15310709 | MS.gene09021:CDS |
| TCTTGATTGAGCAGGAAGTT+TGG | 0.412734 | 4.4:-15311611 | MS.gene09021:CDS |
| GCTGCAATATTAACTTCAAT+TGG | 0.416348 | 4.4:-15313505 | MS.gene09021:CDS |
| GAACAAGAGAACTCTAAATA+GGG | 0.416973 | 4.4:-15311379 | MS.gene09021:CDS |
| TGTTTATGGTTGACACCCCT+TGG | 0.417467 | 4.4:+15311658 | None:intergenic |
| TATGCCACACCACTTGTTAG+AGG | 0.422210 | 4.4:+15315229 | None:intergenic |
| ATTGTATCTGTTGAAGATAC+AGG | 0.422648 | 4.4:-15312062 | MS.gene09021:CDS |
| GTTGGACTGTAGTGTCTTTG+TGG | 0.426681 | 4.4:-15315778 | MS.gene09021:CDS |
| ACTAAGCATTAGCAAGTGTT+TGG | 0.428271 | 4.4:-15311943 | MS.gene09021:CDS |
| TTAACAAGAATGAACAACTT+TGG | 0.432009 | 4.4:+15311522 | None:intergenic |
| AAAGGATTCAAGCAACTAAT+GGG | 0.437942 | 4.4:-15314516 | MS.gene09021:intron |
| TGAAAGGGCTAGGATTGTTC+AGG | 0.438583 | 4.4:-15315690 | MS.gene09021:CDS |
| ATTTGATGTTGAGTCATTAG+TGG | 0.439863 | 4.4:-15313820 | MS.gene09021:CDS |
| TCCCGAAAACATGGAGGAAC+TGG | 0.442693 | 4.4:-15311972 | MS.gene09021:CDS |
| GCAAATAATTACTAATCTCA+TGG | 0.446857 | 4.4:-15312708 | MS.gene09021:CDS |
| TCTGATAAGTCCCAAGGAAA+AGG | 0.449413 | 4.4:-15312911 | MS.gene09021:CDS |
| ATATTGCTAAACAGGTATCT+TGG | 0.449675 | 4.4:-15313849 | MS.gene09021:intron |
| AAACATGGAGGAACTGGTAT+TGG | 0.453248 | 4.4:-15311966 | MS.gene09021:CDS |
| TTTACTGCTGTCTTCGCCAA+TGG | 0.460268 | 4.4:-15311858 | MS.gene09021:CDS |
| AACTTCCCGATAAAGTTGTT+CGG | 0.460960 | 4.4:+15310626 | None:intergenic |
| CATGTCAGCACTCTTAACTT+TGG | 0.464215 | 4.4:-15313678 | MS.gene09021:CDS |
| TCTGCAGTCATCGCTAAAAT+CGG | 0.464289 | 4.4:+15310720 | None:intergenic |
| GGAGATTGTTCATTCTATAG+AGG | 0.466518 | 4.4:-15312228 | MS.gene09021:CDS |
| GCATCTCATGTTTCCTGAAA+GGG | 0.466982 | 4.4:+15313652 | None:intergenic |
| AGATTTAGATGTAACTCAAC+AGG | 0.467158 | 4.4:-15313086 | MS.gene09021:CDS |
| CATCGGTGTTCTGATTTCAT+GGG | 0.467349 | 4.4:+15313248 | None:intergenic |
| TGAAGCCGAACAACTTTATC+GGG | 0.468450 | 4.4:-15310631 | MS.gene09021:CDS |
| ATACAAAGATGTGGCTGAAA+TGG | 0.468585 | 4.4:-15315916 | None:intergenic |
| ACTCATCCAATTGCCATGTA+TGG | 0.469930 | 4.4:-15313729 | MS.gene09021:CDS |
| AGGTTGGATTATTAAGAGAA+TGG | 0.472979 | 4.4:-15315158 | MS.gene09021:CDS |
| TAAAGTTGTTCGGCTTCAAA+TGG | 0.473516 | 4.4:+15310636 | None:intergenic |
| GAAAATAAGTACCTGATCAA+TGG | 0.475341 | 4.4:+15315586 | None:intergenic |
| TCTTGTAGACGGCAAATGTA+AGG | 0.478724 | 4.4:+15314569 | None:intergenic |
| GACAGCAGTAAAAGTAAAAG+TGG | 0.479310 | 4.4:+15311869 | None:intergenic |
| CCTTGGCATTCACGTTGAAA+CGG | 0.483428 | 4.4:-15311694 | MS.gene09021:CDS |
| TAAGAGTGCTTCATTATGAA+AGG | 0.486345 | 4.4:-15315201 | MS.gene09021:CDS |
| TGCTAGCATGTGTGATGAAA+GGG | 0.486559 | 4.4:-15315705 | MS.gene09021:CDS |
| GACGAACCTACTTGCATGAA+TGG | 0.486640 | 4.4:+15311999 | None:intergenic |
| ACCTGCATATTCAGAATTTG+AGG | 0.486963 | 4.4:-15311784 | MS.gene09021:CDS |
| CCCTCAAATTCTGAATATGC+AGG | 0.488168 | 4.4:+15311783 | None:intergenic |
| TCTAGTGTCACTTATAAATG+AGG | 0.488685 | 4.4:-15313029 | MS.gene09021:CDS |
| CCTTGAATCCTTTCCAACTC+AGG | 0.489334 | 4.4:+15312147 | None:intergenic |
| CTTCTCAAATCAAATCGGTT+AGG | 0.491529 | 4.4:-15314598 | MS.gene09021:CDS |
| AAACTGCTAATAGGTGATCC+TGG | 0.491656 | 4.4:-15312740 | MS.gene09021:CDS |
| GAGTCCCTCAGCCATTGATC+AGG | 0.494009 | 4.4:-15315597 | MS.gene09021:intron |
| TCAGGCTTCTCAAATCAAAT+CGG | 0.494173 | 4.4:-15314603 | MS.gene09021:CDS |
| TGTTGACATGGGTATTGGGT+TGG | 0.494780 | 4.4:-15315796 | MS.gene09021:CDS |
| TGTTGATATGCTTTCTGGAA+AGG | 0.498415 | 4.4:-15315011 | MS.gene09021:intron |
| AGAGAGTGAAGAGAGAGTTG+TGG | 0.498961 | 4.4:-15315829 | MS.gene09021:CDS |
| AGCATTAGCAAGTGTTTGGT+TGG | 0.499734 | 4.4:-15311939 | MS.gene09021:CDS |
| TTCAAGGCTTTCAGTCAAGA+TGG | 0.501177 | 4.4:-15312131 | MS.gene09021:CDS |
| TTCAGTCAAGATGGACCACT+TGG | 0.502714 | 4.4:-15312122 | MS.gene09021:CDS |
| TGCTAAACAGGTATCTTGGT+GGG | 0.506352 | 4.4:-15313845 | MS.gene09021:intron |
| TACAGCGAGAGATGAATGTT+AGG | 0.506665 | 4.4:-15311401 | MS.gene09021:CDS |
| TCGTCGATCTCCCGAAAACA+TGG | 0.509308 | 4.4:-15311981 | MS.gene09021:CDS |
| TGTTTGGTTGGCCTCATGAA+TGG | 0.512361 | 4.4:-15311927 | MS.gene09021:CDS |
| TGCCTAAGGTGTGGAATGGA+TGG | 0.514612 | 4.4:-15310672 | MS.gene09021:CDS |
| GTTCTAATGAGTGTAAAATA+CGG | 0.515138 | 4.4:-15311827 | MS.gene09021:CDS |
| ATTTGAGGGTATGAATGCAT+TGG | 0.519831 | 4.4:-15311769 | MS.gene09021:CDS |
| CAACGTGAATGCCAAGGCGT+TGG | 0.521697 | 4.4:+15311700 | None:intergenic |
| CAACATGGTCTTGATTGAGC+AGG | 0.522436 | 4.4:-15311619 | MS.gene09021:CDS |
| AATCCAGAAAATACATTGAG+TGG | 0.523791 | 4.4:-15312191 | MS.gene09021:CDS |
| TGCATCTCATGTTTCCTGAA+AGG | 0.524248 | 4.4:+15313651 | None:intergenic |
| GTGCAAGAGAATCAGGCAAA+GGG | 0.525841 | 4.4:-15314642 | MS.gene09021:CDS |
| AATTTGAGAAGGAACAAGGT+TGG | 0.526965 | 4.4:-15315174 | MS.gene09021:CDS |
| CGGTTTCAGATTTGAACCAA+GGG | 0.529721 | 4.4:-15311674 | MS.gene09021:CDS |
| TAGGTGATCCTGGAAGGTTT+CGG | 0.530999 | 4.4:-15312730 | MS.gene09021:CDS |
| GAAATCAGAACACCGATGAA+TGG | 0.536195 | 4.4:-15313243 | MS.gene09021:CDS |
| TGATATATTTGAGCCATACA+TGG | 0.537691 | 4.4:+15313716 | None:intergenic |
| ATTCAAATGCCAGAAATGGA+TGG | 0.537787 | 4.4:-15311162 | MS.gene09021:CDS |
| GTGAATCGTGCAGTAGCAGC+TGG | 0.538402 | 4.4:-15311288 | MS.gene09021:CDS |
| GTCAGAACAGCACAGGAAAG+TGG | 0.540070 | 4.4:-15313058 | MS.gene09021:CDS |
| CAAATAATTACTAATCTCAT+GGG | 0.541408 | 4.4:-15312707 | MS.gene09021:CDS |
| TTGTGAAAAGTTGCCTGAGT+TGG | 0.542609 | 4.4:-15312160 | MS.gene09021:CDS |
| GCATGTGTGATGAAAGGGCT+AGG | 0.544298 | 4.4:-15315700 | MS.gene09021:CDS |
| GAACAATCTCCTCAACAAGA+TGG | 0.546858 | 4.4:+15312240 | None:intergenic |
| AGATGATTACCATGAAATGA+TGG | 0.547933 | 4.4:-15313413 | MS.gene09021:CDS |
| CCTGCATATTCAGAATTTGA+GGG | 0.551039 | 4.4:-15311783 | MS.gene09021:CDS |
| TGTGACTATCCATCTTGTTG+AGG | 0.552354 | 4.4:-15312249 | MS.gene09021:CDS |
| GTATCTTGTGCAAATATGAC+AGG | 0.555330 | 4.4:+15315052 | None:intergenic |
| CAATATCACATCCAACGCCT+TGG | 0.556712 | 4.4:-15311711 | MS.gene09021:CDS |
| ATTGATGAGATCACTAGAGA+TGG | 0.556798 | 4.4:+15312088 | None:intergenic |
| CAAAGATGTGGCTGAAATGG+TGG | 0.559449 | 4.4:-15315913 | None:intergenic |
| GCAAGCATGCTTGCCCTGAG+TGG | 0.560278 | 4.4:+15311432 | None:intergenic |
| AAGAGTGCTTCATTATGAAA+GGG | 0.560545 | 4.4:-15315200 | MS.gene09021:CDS |
| ATTTGATTTGAGAAGCCTGA+AGG | 0.561335 | 4.4:+15314606 | None:intergenic |
| TGCTAATAGGTGATCCTGGA+AGG | 0.562191 | 4.4:-15312736 | MS.gene09021:CDS |
| CAAATGCAACTCCAAATGAA+AGG | 0.563584 | 4.4:-15314534 | MS.gene09021:CDS |
| TTCAAATGCCAGAAATGGAT+GGG | 0.564303 | 4.4:-15311161 | MS.gene09021:intron |
| TTGCTAGCATGTGTGATGAA+AGG | 0.564904 | 4.4:-15315706 | MS.gene09021:CDS |
| GGGTGTCAACCATAAACAAA+GGG | 0.565304 | 4.4:-15311653 | MS.gene09021:CDS |
| AAGTACCTGATCAATGGCTG+AGG | 0.566544 | 4.4:+15315592 | None:intergenic |
| AGCAGATGTTGCAAAATCCC+AGG | 0.568472 | 4.4:-15313368 | MS.gene09021:intron |
| ACAAGAATGAACAACTTTGG+AGG | 0.570727 | 4.4:+15311525 | None:intergenic |
| TATTCTTCCTGAAGAGGGGA+TGG | 0.575235 | 4.4:+15315079 | None:intergenic |
| TTAGCCATCTTCTTGTTGGG+AGG | 0.575871 | 4.4:-15311338 | MS.gene09021:CDS |
| GAGCATATTCTTCCTGAAGA+GGG | 0.577257 | 4.4:+15315074 | None:intergenic |
| TGAAAGGGAACAATTTGAGA+AGG | 0.579717 | 4.4:-15315185 | MS.gene09021:CDS |
| ATGAGAGGTTGAGATTCTCT+AGG | 0.586217 | 4.4:+15312029 | None:intergenic |
| ATCCAATTTCGCCATTCATG+AGG | 0.589404 | 4.4:+15311916 | None:intergenic |
| TGTATGGCTCAAATATATCA+GGG | 0.591616 | 4.4:-15313713 | MS.gene09021:CDS |
| TTGCTAAACAGGTATCTTGG+TGG | 0.592307 | 4.4:-15313846 | MS.gene09021:intron |
| GGAGCATATTCTTCCTGAAG+AGG | 0.594545 | 4.4:+15315073 | None:intergenic |
| TTTGATTTGAGAAGCCTGAA+GGG | 0.594834 | 4.4:+15314607 | None:intergenic |
| GAACAATTTGAGAAGGAACA+AGG | 0.595055 | 4.4:-15315178 | MS.gene09021:CDS |
| ATTAGAACTGAGGAGTCCAT+TGG | 0.595386 | 4.4:+15311842 | None:intergenic |
| CTATCATCACAAAACCACTC+AGG | 0.595668 | 4.4:-15311446 | MS.gene09021:CDS |
| AATATTGCAGCACATGGCAA+AGG | 0.595803 | 4.4:+15313517 | None:intergenic |
| TAAGAACGATTATGCTGTAG+AGG | 0.600889 | 4.4:-15315110 | MS.gene09021:CDS |
| ACGGTTTCAGATTTGAACCA+AGG | 0.601766 | 4.4:-15311675 | MS.gene09021:CDS |
| CGTGCAAGAGAATCAGGCAA+AGG | 0.602570 | 4.4:-15314643 | MS.gene09021:CDS |
| TCACCTAAAACACCATTCAT+CGG | 0.602655 | 4.4:+15313231 | None:intergenic |
| AAAAGTTGCCTGAGTTGGAA+AGG | 0.608555 | 4.4:-15312155 | MS.gene09021:CDS |
| TACAGGTAGAATCAGAGAGA+TGG | 0.608677 | 4.4:-15310784 | MS.gene09021:CDS |
| TTCACTCCATTCATGCAAGT+AGG | 0.609373 | 4.4:-15312005 | MS.gene09021:CDS |
| ATTTGGTAAGCTAGAGCTTG+AGG | 0.609575 | 4.4:-15312984 | MS.gene09021:CDS |
| GGAATATGTCAGAACAGCAC+AGG | 0.609824 | 4.4:-15313065 | MS.gene09021:CDS |
| GTTTACAAGCTACTGAGAAG+AGG | 0.609832 | 4.4:-15315739 | MS.gene09021:CDS |
| CATGAGAAATGCCTAAGGTG+TGG | 0.612289 | 4.4:-15310681 | MS.gene09021:CDS |
| TATCATCACAAAACCACTCA+GGG | 0.614790 | 4.4:-15311445 | MS.gene09021:CDS |
| ATTGCAGCACATGGCAAAGG+CGG | 0.615431 | 4.4:+15313520 | None:intergenic |
| GGGGTGTCAACCATAAACAA+AGG | 0.619294 | 4.4:-15311654 | MS.gene09021:CDS |
| CATAGAAAATATGTCCAACA+AGG | 0.621926 | 4.4:+15313464 | None:intergenic |
| TTTGAGAGGCCTCTAACAAG+TGG | 0.622010 | 4.4:-15315238 | MS.gene09021:CDS |
| GCTAAACAGGTATCTTGGTG+GGG | 0.627851 | 4.4:-15313844 | MS.gene09021:intron |
| CATGCGTCGAACTGATGAGG+TGG | 0.627952 | 4.4:+15311195 | None:intergenic |
| CCGTTTCAACGTGAATGCCA+AGG | 0.630331 | 4.4:+15311694 | None:intergenic |
| TGGAAGATATCTCTTGTAGA+CGG | 0.637440 | 4.4:+15314558 | None:intergenic |
| GAAATGCCTAAGGTGTGGAA+TGG | 0.638335 | 4.4:-15310676 | MS.gene09021:CDS |
| CTACACATGAGAAATGCCTA+AGG | 0.639949 | 4.4:-15310686 | MS.gene09021:CDS |
| AGTACCTGATCAATGGCTGA+GGG | 0.641644 | 4.4:+15315593 | None:intergenic |
| AGCATATTCTTCCTGAAGAG+GGG | 0.643515 | 4.4:+15315075 | None:intergenic |
| GAAGTTAATATTGCAGCACA+TGG | 0.648248 | 4.4:+15313511 | None:intergenic |
| GTCCCAAGGAAAAGGAGTCG+AGG | 0.651906 | 4.4:-15312903 | MS.gene09021:intron |
| TCTGTTGAAGATACAGGTGA+CGG | 0.654876 | 4.4:-15312056 | MS.gene09021:CDS |
| GCCTAAGGTGTGGAATGGAT+GGG | 0.659789 | 4.4:-15310671 | MS.gene09021:CDS |
| TCTGATTTCATGGGAAACAG+TGG | 0.660492 | 4.4:+15313257 | None:intergenic |
| GATGTGGTTTGTGTTAGCAG+TGG | 0.662109 | 4.4:-15311243 | MS.gene09021:CDS |
| ACCCATCCATTCCACACCTT+AGG | 0.666090 | 4.4:+15310670 | None:intergenic |
| TTGCACGCAACACATTATCA+CGG | 0.668088 | 4.4:+15314659 | None:intergenic |
| AGCACAAGGAAAATCAGCCA+CGG | 0.673243 | 4.4:-15311552 | MS.gene09021:CDS |
| AAACATGCGTCGAACTGATG+AGG | 0.675854 | 4.4:+15311192 | None:intergenic |
| AAAGATGTGGCTGAAATGGT+GGG | 0.675883 | 4.4:-15315912 | None:intergenic |
| GAGGCCTCTAACAAGTGGTG+TGG | 0.676496 | 4.4:-15315233 | MS.gene09021:CDS |
| TGCAAGAGAATCAGGCAAAG+GGG | 0.689158 | 4.4:-15314641 | MS.gene09021:CDS |
| TCGATCTCCCGAAAACATGG+AGG | 0.692524 | 4.4:-15311978 | MS.gene09021:CDS |
| GTATGGCTCAAATATATCAG+GGG | 0.693592 | 4.4:-15313712 | MS.gene09021:CDS |
| GGTTTCAGATTTGAACCAAG+GGG | 0.702437 | 4.4:-15311673 | MS.gene09021:CDS |
| AGGGAATGCAGTTATCAACA+TGG | 0.702500 | 4.4:-15311634 | MS.gene09021:CDS |
| ATGGAAGAGAAAGAACCAAG+TGG | 0.711725 | 4.4:+15312107 | None:intergenic |
| ATGAATGGAGTGAAGATGAG+AGG | 0.715966 | 4.4:+15312014 | None:intergenic |
| ACAACTTTGGAGGAAAACCG+TGG | 0.762101 | 4.4:+15311535 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTATTTTATATTTTGTAA+TGG | + | chr4.4:15313954-15313973 | None:intergenic | 10.0% |
| !! | AAAATCTTAATTGTTTGATT+GGG | - | chr4.4:15311188-15311207 | MS.gene09021:CDS | 15.0% |
| !! | TAAAATCTTAATTGTTTGAT+TGG | - | chr4.4:15311187-15311206 | MS.gene09021:CDS | 15.0% |
| !! | TACTTAACAGTTTATATAAA+AGG | - | chr4.4:15315511-15315530 | MS.gene09021:intron | 15.0% |
| !!! | AAATTTGATGATTTATAGTT+TGG | - | chr4.4:15315400-15315419 | MS.gene09021:intron | 15.0% |
| !!! | AACTATAAATCATCAAATTT+TGG | + | chr4.4:15315400-15315419 | None:intergenic | 15.0% |
| !!! | ATTGATAATTACATAAATTG+TGG | + | chr4.4:15315636-15315655 | None:intergenic | 15.0% |
| !!! | GTAATATATTTTTCATTTCT+TGG | - | chr4.4:15313629-15313648 | MS.gene09021:intron | 15.0% |
| !!! | GTTTCTTGTTAAATTTTTTA+AGG | - | chr4.4:15311538-15311557 | MS.gene09021:CDS | 15.0% |
| !!! | TTATCTTTTGTTATAGAAAT+AGG | - | chr4.4:15312389-15312408 | MS.gene09021:intron | 15.0% |
| !! | AAATTTCCACATAAAAAATG+TGG | - | chr4.4:15315434-15315453 | MS.gene09021:intron | 20.0% |
| !! | CAAACAATTAAATCATGAAA+AGG | + | chr4.4:15313710-15313729 | None:intergenic | 20.0% |
| !! | CAAATAATTACTAATCTCAT+GGG | - | chr4.4:15313803-15313822 | MS.gene09021:CDS | 20.0% |
| !! | GCAATATACAAGAAATTAAA+AGG | + | chr4.4:15312648-15312667 | None:intergenic | 20.0% |
| !!! | ATTCTAATTGTTGATGATAA+TGG | - | chr4.4:15315198-15315217 | MS.gene09021:CDS | 20.0% |
| !!! | CTTTTCATGATTTAATTGTT+TGG | - | chr4.4:15313708-15313727 | MS.gene09021:CDS | 20.0% |
| !!! | TCAATAGTTCATGTAATTTT+TGG | - | chr4.4:15312581-15312600 | MS.gene09021:intron | 20.0% |
| ! | AAAATTTCACGATGATCAAA+GGG | + | chr4.4:15313657-15313676 | None:intergenic | 25.0% |
| ! | AAATAGACATAGCTTGAATA+TGG | + | chr4.4:15310868-15310887 | None:intergenic | 25.0% |
| ! | ATAGAACAAAGTTATGGTTT+AGG | + | chr4.4:15313366-15313385 | None:intergenic | 25.0% |
| ! | ATGAACAAAGAACAAACTAA+TGG | + | chr4.4:15312056-15312075 | None:intergenic | 25.0% |
| ! | CAAGAAACTGCAATTATAAT+TGG | + | chr4.4:15313233-15313252 | None:intergenic | 25.0% |
| ! | CAGATGATTTATCTATTCTA+TGG | + | chr4.4:15311608-15311627 | None:intergenic | 25.0% |
| ! | CTATGGTTTAAATATCCATT+AGG | + | chr4.4:15311591-15311610 | None:intergenic | 25.0% |
| ! | CTTACATTATGGTATAGTTT+GGG | + | chr4.4:15312483-15312502 | None:intergenic | 25.0% |
| ! | GCAAATAATTACTAATCTCA+TGG | - | chr4.4:15313802-15313821 | MS.gene09021:CDS | 25.0% |
| ! | GTTCTAATGAGTGTAAAATA+CGG | - | chr4.4:15314683-15314702 | MS.gene09021:intron | 25.0% |
| ! | TAGAACAAAGTTATGGTTTA+GGG | + | chr4.4:15313365-15313384 | None:intergenic | 25.0% |
| ! | TAGAACAATCTTTGATCAAA+GGG | + | chr4.4:15310981-15311000 | None:intergenic | 25.0% |
| ! | TCTTACATTATGGTATAGTT+TGG | + | chr4.4:15312484-15312503 | None:intergenic | 25.0% |
| ! | TGCATTATAGAACAAAGTTA+TGG | + | chr4.4:15313372-15313391 | None:intergenic | 25.0% |
| ! | TTAACAAGAATGAACAACTT+TGG | + | chr4.4:15314991-15315010 | None:intergenic | 25.0% |
| ! | TTTCTTGTATATTGCTAAAC+AGG | - | chr4.4:15312653-15312672 | MS.gene09021:intron | 25.0% |
| !! | TGTCTGATTTTCAACTATTT+AGG | - | chr4.4:15313332-15313351 | MS.gene09021:intron | 25.0% |
| !! | TGTTCTATAATGCATTTTCA+GGG | - | chr4.4:15313378-15313397 | MS.gene09021:CDS | 25.0% |
| !! | TTGTTCTATAATGCATTTTC+AGG | - | chr4.4:15313377-15313396 | MS.gene09021:CDS | 25.0% |
| AAAGGATTCAAGCAACTAAT+GGG | - | chr4.4:15311994-15312013 | MS.gene09021:CDS | 30.0% | |
| AACAGTACTGTCAGTATATT+GGG | - | chr4.4:15310654-15310673 | MS.gene09021:CDS | 30.0% | |
| AACTATGCTGAACATTAAGA+AGG | + | chr4.4:15312917-15312936 | None:intergenic | 30.0% | |
| AATCCAGAAAATACATTGAG+TGG | - | chr4.4:15314319-15314338 | MS.gene09021:intron | 30.0% | |
| ACGAACAGTTGAACATAATT+AGG | - | chr4.4:15312175-15312194 | MS.gene09021:CDS | 30.0% | |
| AGATGATTACCATGAAATGA+TGG | - | chr4.4:15313097-15313116 | MS.gene09021:CDS | 30.0% | |
| AGATTTAGATGTAACTCAAC+AGG | - | chr4.4:15313424-15313443 | MS.gene09021:CDS | 30.0% | |
| AGGTTGGATTATTAAGAGAA+TGG | - | chr4.4:15311352-15311371 | MS.gene09021:CDS | 30.0% | |
| AGTGACATGCATGATTAATA+AGG | + | chr4.4:15313849-15313868 | None:intergenic | 30.0% | |
| ATATTCACTTGTTCATCAAC+AGG | - | chr4.4:15311824-15311843 | MS.gene09021:CDS | 30.0% | |
| ATATTGCTAAACAGGTATCT+TGG | - | chr4.4:15312661-15312680 | MS.gene09021:intron | 30.0% | |
| ATCATCATTGTGTTAGAAGT+TGG | - | chr4.4:15315668-15315687 | MS.gene09021:CDS | 30.0% | |
| ATGTATGGCTCAAATATATC+AGG | - | chr4.4:15312796-15312815 | MS.gene09021:intron | 30.0% | |
| ATTGTATCTGTTGAAGATAC+AGG | - | chr4.4:15314448-15314467 | MS.gene09021:intron | 30.0% | |
| ATTTCTGTTGATATGCTTTC+TGG | - | chr4.4:15311494-15311513 | MS.gene09021:CDS | 30.0% | |
| ATTTGATGTTGAGTCATTAG+TGG | - | chr4.4:15312690-15312709 | MS.gene09021:intron | 30.0% | |
| CATAGAAAATATGTCCAACA+AGG | + | chr4.4:15313049-15313068 | None:intergenic | 30.0% | |
| CTAGAACAATCTTTGATCAA+AGG | + | chr4.4:15310982-15311001 | None:intergenic | 30.0% | |
| CTTTGATCAAAGATTGTTCT+AGG | - | chr4.4:15310980-15310999 | MS.gene09021:intron | 30.0% | |
| GAAAATAAGTACCTGATCAA+TGG | + | chr4.4:15310927-15310946 | None:intergenic | 30.0% | |
| GAAAATTTCACGATGATCAA+AGG | + | chr4.4:15313658-15313677 | None:intergenic | 30.0% | |
| GAACAAGAGAACTCTAAATA+GGG | - | chr4.4:15315131-15315150 | MS.gene09021:CDS | 30.0% | |
| GAACTATTGAATTTCAGAGT+AGG | + | chr4.4:15312571-15312590 | None:intergenic | 30.0% | |
| GCTGCAATATTAACTTCAAT+TGG | - | chr4.4:15313005-15313024 | MS.gene09021:CDS | 30.0% | |
| TACAATAGACTTAAATGTCC+TGG | - | chr4.4:15311639-15311658 | MS.gene09021:CDS | 30.0% | |
| TACATAAGCACTTACATGAT+AGG | + | chr4.4:15313921-15313940 | None:intergenic | 30.0% | |
| TGATATATTTGAGCCATACA+TGG | + | chr4.4:15312797-15312816 | None:intergenic | 30.0% | |
| TGTATGGCTCAAATATATCA+GGG | - | chr4.4:15312797-15312816 | MS.gene09021:intron | 30.0% | |
| TGTGAACTGCAAAACAATTA+CGG | + | chr4.4:15314224-15314243 | None:intergenic | 30.0% | |
| TGTTCACTCTTCTTACATTA+TGG | + | chr4.4:15312494-15312513 | None:intergenic | 30.0% | |
| ! | AAACCACTCAATGTATTTTC+TGG | + | chr4.4:15314325-15314344 | None:intergenic | 30.0% |
| ! | ATTAATCATGCATGTCACTT+AGG | - | chr4.4:15313850-15313869 | MS.gene09021:intron | 30.0% |
| ! | CATAAATTGTGGTATTTCTG+TGG | + | chr4.4:15315625-15315644 | None:intergenic | 30.0% |
| ! | GTCACTTATAAATGAGGTTT+TGG | - | chr4.4:15313487-15313506 | MS.gene09021:CDS | 30.0% |
| ! | TACTTTTGCAATTCGATTCA+CGG | + | chr4.4:15313075-15313094 | None:intergenic | 30.0% |
| ! | TTTTAAGCTCCATCATTTCA+TGG | + | chr4.4:15313109-15313128 | None:intergenic | 30.0% |
| ! | TTTTACACTCATTAGAACTG+AGG | + | chr4.4:15314681-15314700 | None:intergenic | 30.0% |
| ! | TTTTGACATACGTTCGATTT+TGG | - | chr4.4:15313556-15313575 | MS.gene09021:intron | 30.0% |
| ! | TTTTTCCCATCAAATGTGAA+TGG | + | chr4.4:15312152-15312171 | None:intergenic | 30.0% |
| !! | AAGAGTGCTTCATTATGAAA+GGG | - | chr4.4:15311310-15311329 | MS.gene09021:CDS | 30.0% |
| !! | ACACAGAAGTATCTATAAAC+TGG | - | chr4.4:15315761-15315780 | MS.gene09021:CDS | 30.0% |
| !! | TAAGAGTGCTTCATTATGAA+AGG | - | chr4.4:15311309-15311328 | MS.gene09021:CDS | 30.0% |
| !! | TCTAGTGTCACTTATAAATG+AGG | - | chr4.4:15313481-15313500 | MS.gene09021:CDS | 30.0% |
| !!! | CTATTTTTTATAAGCTGTCC+TGG | + | chr4.4:15312335-15312354 | None:intergenic | 30.0% |
| !!! | TATAAATGAGGTTTTGGATC+AGG | - | chr4.4:15313493-15313512 | MS.gene09021:CDS | 30.0% |
| !!! | TCTTCTCCACATTTTTTATG+TGG | + | chr4.4:15315443-15315462 | None:intergenic | 30.0% |
| AAAAAGGTAGATGCATACCT+GGG | + | chr4.4:15313162-15313181 | None:intergenic | 35.0% | |
| AACACTCCATTCACATTTGA+TGG | - | chr4.4:15312143-15312162 | MS.gene09021:CDS | 35.0% | |
| AACTTCCCGATAAAGTTGTT+CGG | + | chr4.4:15315887-15315906 | None:intergenic | 35.0% | |
| AACTTTATCGGGAAGTTTCT+CGG | - | chr4.4:15315890-15315909 | MS.gene09021:CDS | 35.0% | |
| AAGCTATCCTAGAGAGTTTA+TGG | - | chr4.4:15314011-15314030 | MS.gene09021:intron | 35.0% | |
| AATTGTTTGGCAATCACAGT+TGG | - | chr4.4:15313721-15313740 | MS.gene09021:CDS | 35.0% | |
| AATTTGAGAAGGAACAAGGT+TGG | - | chr4.4:15311336-15311355 | MS.gene09021:CDS | 35.0% | |
| ACAAATTCATCGAGTCAGAT+AGG | - | chr4.4:15311756-15311775 | MS.gene09021:CDS | 35.0% | |
| ACAAGAATGAACAACTTTGG+AGG | + | chr4.4:15314988-15315007 | None:intergenic | 35.0% | |
| ACACTCCATTCACATTTGAT+GGG | - | chr4.4:15312144-15312163 | MS.gene09021:CDS | 35.0% | |
| ACCTGCATATTCAGAATTTG+AGG | - | chr4.4:15314726-15314745 | MS.gene09021:intron | 35.0% | |
| ACTAAGCATTAGCAAGTGTT+TGG | - | chr4.4:15314567-15314586 | MS.gene09021:CDS | 35.0% | |
| ACTAGTTCAGCTGAAAACTT+TGG | + | chr4.4:15311565-15311584 | None:intergenic | 35.0% | |
| AGCTGAACTAGTATACCTAA+TGG | - | chr4.4:15311573-15311592 | MS.gene09021:CDS | 35.0% | |
| ATCTACATAGAAGACACACA+AGG | - | chr4.4:15315581-15315600 | MS.gene09021:intron | 35.0% | |
| ATTCAAATGCCAGAAATGGA+TGG | - | chr4.4:15315348-15315367 | MS.gene09021:intron | 35.0% | |
| ATTGATGAGATCACTAGAGA+TGG | + | chr4.4:15314425-15314444 | None:intergenic | 35.0% | |
| CAAATACGTCAATCCAAACA+TGG | + | chr4.4:15312201-15312220 | None:intergenic | 35.0% | |
| CAAATGCAACTCCAAATGAA+AGG | - | chr4.4:15311976-15311995 | MS.gene09021:CDS | 35.0% | |
| CAACAGTACTGTCAGTATAT+TGG | - | chr4.4:15310653-15310672 | MS.gene09021:CDS | 35.0% | |
| CAAGACCTTAACTATCACAA+GGG | + | chr4.4:15312531-15312550 | None:intergenic | 35.0% | |
| CAAGTTCCTAAACTGCTAAT+AGG | - | chr4.4:15313761-15313780 | MS.gene09021:CDS | 35.0% | |
| CAGAACTTTAGATAAACCAG+AGG | + | chr4.4:15312098-15312117 | None:intergenic | 35.0% | |
| CCTGCATATTCAGAATTTGA+GGG | - | chr4.4:15314727-15314746 | MS.gene09021:intron | 35.0% | |
| CTTAACCTGCACTAATTACA+CGG | - | chr4.4:15313201-15313220 | MS.gene09021:intron | 35.0% | |
| CTTCTCAAATCAAATCGGTT+AGG | - | chr4.4:15311912-15311931 | MS.gene09021:CDS | 35.0% | |
| GAAAGGATTCAAGCAACTAA+TGG | - | chr4.4:15311993-15312012 | MS.gene09021:CDS | 35.0% | |
| GAACAATTTGAGAAGGAACA+AGG | - | chr4.4:15311332-15311351 | MS.gene09021:CDS | 35.0% | |
| GAACATAATTAGGCCATGTT+TGG | - | chr4.4:15312185-15312204 | MS.gene09021:CDS | 35.0% | |
| GAAGTTAATATTGCAGCACA+TGG | + | chr4.4:15313002-15313021 | None:intergenic | 35.0% | |
| GACAGCAGTAAAAGTAAAAG+TGG | + | chr4.4:15314644-15314663 | None:intergenic | 35.0% | |
| GATCAGGCAAAGATTGAATT+TGG | - | chr4.4:15313509-15313528 | MS.gene09021:CDS | 35.0% | |
| GCATAATCGTTCTTATGAAC+TGG | + | chr4.4:15311395-15311414 | None:intergenic | 35.0% | |
| GGAACAAGAGAACTCTAAAT+AGG | - | chr4.4:15315130-15315149 | MS.gene09021:CDS | 35.0% | |
| GGAGATTGTTCATTCTATAG+AGG | - | chr4.4:15314282-15314301 | MS.gene09021:intron | 35.0% | |
| GGATATTCAAATGCCAGAAA+TGG | - | chr4.4:15315344-15315363 | MS.gene09021:intron | 35.0% | |
| GTATCTTGTGCAAATATGAC+AGG | + | chr4.4:15311461-15311480 | None:intergenic | 35.0% | |
| GTATGGCTCAAATATATCAG+GGG | - | chr4.4:15312798-15312817 | MS.gene09021:intron | 35.0% | |
| GTTGCTTGAATCCTTTCATT+TGG | + | chr4.4:15311990-15312009 | None:intergenic | 35.0% | |
| TAAAAAGGTAGATGCATACC+TGG | + | chr4.4:15313163-15313182 | None:intergenic | 35.0% | |
| TAAAGTTGTTCGGCTTCAAA+TGG | + | chr4.4:15315877-15315896 | None:intergenic | 35.0% | |
| TAAGAACGATTATGCTGTAG+AGG | - | chr4.4:15311400-15311419 | MS.gene09021:CDS | 35.0% | |
| TATCATCACAAAACCACTCA+GGG | - | chr4.4:15315065-15315084 | MS.gene09021:CDS | 35.0% | |
| TATCTGACTAAAAGCCTGTT+TGG | + | chr4.4:15314119-15314138 | None:intergenic | 35.0% | |
| TATGGGAACAACTTATGACA+TGG | - | chr4.4:15312274-15312293 | MS.gene09021:CDS | 35.0% | |
| TCAAGACCTTAACTATCACA+AGG | + | chr4.4:15312532-15312551 | None:intergenic | 35.0% | |
| TCAAGTAAGTCAAACCAAAC+AGG | - | chr4.4:15314102-15314121 | MS.gene09021:intron | 35.0% | |
| TCACCTAAAACACCATTCAT+CGG | + | chr4.4:15313282-15313301 | None:intergenic | 35.0% | |
| TCAGGCTTCTCAAATCAAAT+CGG | - | chr4.4:15311907-15311926 | MS.gene09021:CDS | 35.0% | |
| TGAAAGGGAACAATTTGAGA+AGG | - | chr4.4:15311325-15311344 | MS.gene09021:CDS | 35.0% | |
| TGGAAGATATCTCTTGTAGA+CGG | + | chr4.4:15311955-15311974 | None:intergenic | 35.0% | |
| TGTGAATCGTGATACTGTTT+GGG | - | chr4.4:15312245-15312264 | MS.gene09021:CDS | 35.0% | |
| TTCAAATGCCAGAAATGGAT+GGG | - | chr4.4:15315349-15315368 | MS.gene09021:intron | 35.0% | |
| TTGAAGCCGAACAACTTTAT+CGG | - | chr4.4:15315878-15315897 | MS.gene09021:CDS | 35.0% | |
| TTTATTTCCATGAGCTATCC+AGG | - | chr4.4:15312314-15312333 | MS.gene09021:intron | 35.0% | |
| TTTGCAAGTGAACCAAAAAC+TGG | - | chr4.4:15314616-15314635 | MS.gene09021:CDS | 35.0% | |
| ! | AACTGCATTCCCTTTGTTTA+TGG | + | chr4.4:15314869-15314888 | None:intergenic | 35.0% |
| ! | ACTTTTGCTCTAATAGGTCT+TGG | + | chr4.4:15314775-15314794 | None:intergenic | 35.0% |
| ! | ATCAAAGATTGTTCTAGGCA+AGG | - | chr4.4:15310985-15311004 | MS.gene09021:intron | 35.0% |
| ! | ATTTGAGGGTATGAATGCAT+TGG | - | chr4.4:15314741-15314760 | MS.gene09021:intron | 35.0% |
| ! | CTATTTTCTGATAAGTCCCA+AGG | - | chr4.4:15313593-15313612 | MS.gene09021:intron | 35.0% |
| ! | CTTTTGTTGACATGGGTATT+GGG | - | chr4.4:15310710-15310729 | MS.gene09021:CDS | 35.0% |
| ! | GAGAAAGCTTTTGTTGACAT+GGG | - | chr4.4:15310703-15310722 | MS.gene09021:CDS | 35.0% |
| ! | GGCTAAGAGACAAATTTTGA+AGG | + | chr4.4:15315158-15315177 | None:intergenic | 35.0% |
| ! | GTAAAAGTGGAACCAGTTTT+TGG | + | chr4.4:15314631-15314650 | None:intergenic | 35.0% |
| ! | TCATTTGGAGTTGCATTTGA+TGG | + | chr4.4:15311975-15311994 | None:intergenic | 35.0% |
| ! | TGAGACACTTTTGCTCTAAT+AGG | + | chr4.4:15314781-15314800 | None:intergenic | 35.0% |
| ! | TGTTGATATGCTTTCTGGAA+AGG | - | chr4.4:15311499-15311518 | MS.gene09021:CDS | 35.0% |
| !! | AAATGGTGGGAGAAGATTTT+AGG | - | chr4.4:15310611-15310630 | MS.gene09021:CDS | 35.0% |
| !! | AATGGTGGGAGAAGATTTTA+GGG | - | chr4.4:15310612-15310631 | MS.gene09021:CDS | 35.0% |
| !! | ATTTGATTTGAGAAGCCTGA+AGG | + | chr4.4:15311907-15311926 | None:intergenic | 35.0% |
| !! | TTTGATTTGAGAAGCCTGAA+GGG | + | chr4.4:15311906-15311925 | None:intergenic | 35.0% |
| !!! | AGTGGTTTTGTGATGATAGT+AGG | + | chr4.4:15315063-15315082 | None:intergenic | 35.0% |
| !!! | CTCATTTTTTCGATAGCACA+AGG | - | chr4.4:15314944-15314963 | MS.gene09021:intron | 35.0% |
| !!! | CTGAATATGCAGGTTTTGTT+TGG | + | chr4.4:15314720-15314739 | None:intergenic | 35.0% |
| !!! | TTCAACAGTTTTGAAGCTAC+AGG | - | chr4.4:15315709-15315728 | MS.gene09021:CDS | 35.0% |
| AAACATGGAGGAACTGGTAT+TGG | - | chr4.4:15314544-15314563 | MS.gene09021:CDS | 40.0% | |
| AAACTGCTAATAGGTGATCC+TGG | - | chr4.4:15313770-15313789 | MS.gene09021:CDS | 40.0% | |
| AAGCTTGAGCAAAGAGTGAA+CGG | + | chr4.4:15311678-15311697 | None:intergenic | 40.0% | |
| AATATTGCAGCACATGGCAA+AGG | + | chr4.4:15312996-15313015 | None:intergenic | 40.0% | |
| ACGGTTTCAGATTTGAACCA+AGG | - | chr4.4:15314835-15314854 | MS.gene09021:intron | 40.0% | |
| ACTCATCCAATTGCCATGTA+TGG | - | chr4.4:15312781-15312800 | MS.gene09021:intron | 40.0% | |
| AGCATATTCTTCCTGAAGAG+GGG | + | chr4.4:15311438-15311457 | None:intergenic | 40.0% | |
| AGCATTAGCAAGTGTTTGGT+TGG | - | chr4.4:15314571-15314590 | MS.gene09021:CDS | 40.0% | |
| AGGGAATGCAGTTATCAACA+TGG | - | chr4.4:15314876-15314895 | MS.gene09021:intron | 40.0% | |
| AGGGATGATGCATATGCTTA+TGG | - | chr4.4:15313397-15313416 | MS.gene09021:CDS | 40.0% | |
| ATACTGTTTGGGAGAGCTTA+TGG | - | chr4.4:15312256-15312275 | MS.gene09021:CDS | 40.0% | |
| ATCCAATTTCGCCATTCATG+AGG | + | chr4.4:15314597-15314616 | None:intergenic | 40.0% | |
| ATGAATGGAGTGAAGATGAG+AGG | + | chr4.4:15314499-15314518 | None:intergenic | 40.0% | |
| ATGAGAGGTTGAGATTCTCT+AGG | + | chr4.4:15314484-15314503 | None:intergenic | 40.0% | |
| ATGGAAGAGAAAGAACCAAG+TGG | + | chr4.4:15314406-15314425 | None:intergenic | 40.0% | |
| ATTAGAACTGAGGAGTCCAT+TGG | + | chr4.4:15314671-15314690 | None:intergenic | 40.0% | |
| ATTATTTGCCGAAACCTTCC+AGG | + | chr4.4:15313791-15313810 | None:intergenic | 40.0% | |
| ATTGCATACCCATCCATTTC+TGG | + | chr4.4:15315360-15315379 | None:intergenic | 40.0% | |
| ATTTGGTAAGCTAGAGCTTG+AGG | - | chr4.4:15313526-15313545 | MS.gene09021:CDS | 40.0% | |
| CAAACAGTATCACGATTCAC+AGG | + | chr4.4:15312246-15312265 | None:intergenic | 40.0% | |
| CACTCTTTGCTCAAGCTTTA+GGG | - | chr4.4:15311680-15311699 | MS.gene09021:CDS | 40.0% | |
| CATGTCAGCACTCTTAACTT+TGG | - | chr4.4:15312832-15312851 | MS.gene09021:intron | 40.0% | |
| CCCTCAAATTCTGAATATGC+AGG | + | chr4.4:15314730-15314749 | None:intergenic | 40.0% | |
| CGATTATGCTGTAGAGGAAT+TGG | - | chr4.4:15311406-15311425 | MS.gene09021:CDS | 40.0% | |
| CGGTTTCAGATTTGAACCAA+GGG | - | chr4.4:15314836-15314855 | MS.gene09021:intron | 40.0% | |
| CTACACATGAGAAATGCCTA+AGG | - | chr4.4:15315824-15315843 | MS.gene09021:CDS | 40.0% | |
| CTATCATCACAAAACCACTC+AGG | - | chr4.4:15315064-15315083 | MS.gene09021:CDS | 40.0% | |
| CTCTTAGCCATCTTCTTGTT+GGG | - | chr4.4:15315169-15315188 | MS.gene09021:CDS | 40.0% | |
| CTCTTCCCTTGTGATAGTTA+AGG | - | chr4.4:15312523-15312542 | MS.gene09021:intron | 40.0% | |
| CTGAACATTAAGAAGGACAG+AGG | + | chr4.4:15312910-15312929 | None:intergenic | 40.0% | |
| CTGTGAATCGTGATACTGTT+TGG | - | chr4.4:15312244-15312263 | MS.gene09021:CDS | 40.0% | |
| GAAATCAGAACACCGATGAA+TGG | - | chr4.4:15313267-15313286 | MS.gene09021:CDS | 40.0% | |
| GAACAATCTCCTCAACAAGA+TGG | + | chr4.4:15314273-15314292 | None:intergenic | 40.0% | |
| GACATGTCCATAAACTCTCT+AGG | + | chr4.4:15314021-15314040 | None:intergenic | 40.0% | |
| GAGCATATTCTTCCTGAAGA+GGG | + | chr4.4:15311439-15311458 | None:intergenic | 40.0% | |
| GATGACTGCAGATGTAATTC+AGG | - | chr4.4:15315801-15315820 | MS.gene09021:CDS | 40.0% | |
| GATGGAGCTTAAAAAACGTG+CGG | - | chr4.4:15313115-15313134 | MS.gene09021:intron | 40.0% | |
| GCATCTCATGTTTCCTGAAA+GGG | + | chr4.4:15312861-15312880 | None:intergenic | 40.0% | |
| GGATCACCTATTAGCAGTTT+AGG | + | chr4.4:15313770-15313789 | None:intergenic | 40.0% | |
| GGGTGTCAACCATAAACAAA+GGG | - | chr4.4:15314857-15314876 | MS.gene09021:intron | 40.0% | |
| GGTGAGTTCTCTAATGTCTA+TGG | - | chr4.4:15313297-15313316 | MS.gene09021:intron | 40.0% | |
| GGTTTCAGATTTGAACCAAG+GGG | - | chr4.4:15314837-15314856 | MS.gene09021:intron | 40.0% | |
| GTTTACAAGCTACTGAGAAG+AGG | - | chr4.4:15310771-15310790 | MS.gene09021:CDS | 40.0% | |
| GTTTGAACCTGGGTAAGAAT+CGG | + | chr4.4:15312965-15312984 | None:intergenic | 40.0% | |
| TACAGCGAGAGATGAATGTT+AGG | - | chr4.4:15315109-15315128 | MS.gene09021:CDS | 40.0% | |
| TACAGGTAGAATCAGAGAGA+TGG | - | chr4.4:15315726-15315745 | MS.gene09021:CDS | 40.0% | |
| TACTGTTTGGGAGAGCTTAT+GGG | - | chr4.4:15312257-15312276 | MS.gene09021:CDS | 40.0% | |
| TCACTCTTTGCTCAAGCTTT+AGG | - | chr4.4:15311679-15311698 | MS.gene09021:CDS | 40.0% | |
| TCGAGTCAGATAGGACTATA+TGG | - | chr4.4:15311765-15311784 | MS.gene09021:CDS | 40.0% | |
| TCTCATGGGCAACTCAATTA+AGG | - | chr4.4:15313817-15313836 | MS.gene09021:CDS | 40.0% | |
| TCTCTTAGCCATCTTCTTGT+TGG | - | chr4.4:15315168-15315187 | MS.gene09021:CDS | 40.0% | |
| TCTGATAAGTCCCAAGGAAA+AGG | - | chr4.4:15313599-15313618 | MS.gene09021:intron | 40.0% | |
| TCTGATTTCATGGGAAACAG+TGG | + | chr4.4:15313256-15313275 | None:intergenic | 40.0% | |
| TCTGCAAGAGTCGAATTGAT+CGG | + | chr4.4:15311028-15311047 | None:intergenic | 40.0% | |
| TCTGCAGTCATCGCTAAAAT+CGG | + | chr4.4:15315793-15315812 | None:intergenic | 40.0% | |
| TCTGTTGAAGATACAGGTGA+CGG | - | chr4.4:15314454-15314473 | MS.gene09021:intron | 40.0% | |
| TCTTACAACTCTGTCACACA+TGG | - | chr4.4:15311070-15311089 | MS.gene09021:intron | 40.0% | |
| TCTTGTAGACGGCAAATGTA+AGG | + | chr4.4:15311944-15311963 | None:intergenic | 40.0% | |
| TGAAGCCGAACAACTTTATC+GGG | - | chr4.4:15315879-15315898 | MS.gene09021:CDS | 40.0% | |
| TGCATCTCATGTTTCCTGAA+AGG | + | chr4.4:15312862-15312881 | None:intergenic | 40.0% | |
| TGCTAAACAGGTATCTTGGT+GGG | - | chr4.4:15312665-15312684 | MS.gene09021:intron | 40.0% | |
| TGCTAGCATGTGTGATGAAA+GGG | - | chr4.4:15310805-15310824 | MS.gene09021:intron | 40.0% | |
| TGTCGTGTACGATGTCATAT+TGG | - | chr4.4:15311145-15311164 | MS.gene09021:intron | 40.0% | |
| TGTCTCTACAGTTGTACACA+AGG | + | chr4.4:15311739-15311758 | None:intergenic | 40.0% | |
| TGTGACTATCCATCTTGTTG+AGG | - | chr4.4:15314261-15314280 | MS.gene09021:intron | 40.0% | |
| TTCAAGGCTTTCAGTCAAGA+TGG | - | chr4.4:15314379-15314398 | MS.gene09021:intron | 40.0% | |
| TTCACTCCATTCATGCAAGT+AGG | - | chr4.4:15314505-15314524 | MS.gene09021:intron | 40.0% | |
| TTGCACGCAACACATTATCA+CGG | + | chr4.4:15311854-15311873 | None:intergenic | 40.0% | |
| TTGCTAAACAGGTATCTTGG+TGG | - | chr4.4:15312664-15312683 | MS.gene09021:intron | 40.0% | |
| TTGCTAGCATGTGTGATGAA+AGG | - | chr4.4:15310804-15310823 | MS.gene09021:intron | 40.0% | |
| TTGTGAAAAGTTGCCTGAGT+TGG | - | chr4.4:15314350-15314369 | MS.gene09021:intron | 40.0% | |
| TTTAAGTCCGATTCTTACCC+AGG | - | chr4.4:15312955-15312974 | MS.gene09021:CDS | 40.0% | |
| TTTGAGCCATACATGGCAAT+TGG | + | chr4.4:15312790-15312809 | None:intergenic | 40.0% | |
| ! | AAAAGTTGCCTGAGTTGGAA+AGG | - | chr4.4:15314355-15314374 | MS.gene09021:intron | 40.0% |
| ! | AACGGATTCAGATTATCACC+AGG | + | chr4.4:15311660-15311679 | None:intergenic | 40.0% |
| ! | ACACCGATGAATGGTGTTTT+AGG | - | chr4.4:15313276-15313295 | MS.gene09021:intron | 40.0% |
| ! | CAGAAAGAACAGCTTTTGAG+AGG | - | chr4.4:15311258-15311277 | MS.gene09021:CDS | 40.0% |
| ! | CATCGGTGTTCTGATTTCAT+GGG | + | chr4.4:15313265-15313284 | None:intergenic | 40.0% |
| ! | CATGTCACTTAGGCAATGTT+TGG | - | chr4.4:15313860-15313879 | MS.gene09021:intron | 40.0% |
| ! | GAAAAAGTATGGAGCAGATG+TGG | - | chr4.4:15315251-15315270 | MS.gene09021:CDS | 40.0% |
| ! | GAATGGAGTGTTTAGTTGCT+TGG | + | chr4.4:15312135-15312154 | None:intergenic | 40.0% |
| ! | GATATGCTTTCTGGAAAGGT+AGG | - | chr4.4:15311503-15311522 | MS.gene09021:CDS | 40.0% |
| ! | GCTTTTGTTGACATGGGTAT+TGG | - | chr4.4:15310709-15310728 | MS.gene09021:CDS | 40.0% |
| ! | GGAGAAAGCTTTTGTTGACA+TGG | - | chr4.4:15310702-15310721 | MS.gene09021:CDS | 40.0% |
| ! | GTTTTGCAGTTCACAGACAA+AGG | - | chr4.4:15314229-15314248 | MS.gene09021:intron | 40.0% |
| ! | TACCAGTTCCTCCATGTTTT+CGG | + | chr4.4:15314543-15314562 | None:intergenic | 40.0% |
| ! | TATAGTTTAGCTTACGCCTC+TGG | - | chr4.4:15312079-15312098 | MS.gene09021:CDS | 40.0% |
| ! | TCAGGCAACTTTTCACAACA+GGG | + | chr4.4:15314348-15314367 | None:intergenic | 40.0% |
| ! | TCATCGGTGTTCTGATTTCA+TGG | + | chr4.4:15313266-15313285 | None:intergenic | 40.0% |
| ! | TTAACTTTGGTGACCCTTTC+AGG | - | chr4.4:15312845-15312864 | MS.gene09021:intron | 40.0% |
| ! | TTTTCCTCCCAACAAGAAGA+TGG | + | chr4.4:15315179-15315198 | None:intergenic | 40.0% |
| ! | TTTTGCAATTCGATTCACGG+TGG | + | chr4.4:15313072-15313091 | None:intergenic | 40.0% |
| !! | CTTGTTATTGCTCTCCTTGT+TGG | - | chr4.4:15313032-15313051 | MS.gene09021:CDS | 40.0% |
| !! | GCTGGTGCTTTGAAAAAGTA+TGG | - | chr4.4:15315240-15315259 | MS.gene09021:CDS | 40.0% |
| AAACATGCGTCGAACTGATG+AGG | + | chr4.4:15315321-15315340 | None:intergenic | 45.0% | |
| AAGTACCTGATCAATGGCTG+AGG | + | chr4.4:15310921-15310940 | None:intergenic | 45.0% | |
| AGAGAGTGAAGAGAGAGTTG+TGG | - | chr4.4:15310681-15310700 | MS.gene09021:CDS | 45.0% | |
| AGCACAAGGAAAATCAGCCA+CGG | - | chr4.4:15314958-15314977 | MS.gene09021:intron | 45.0% | |
| AGCAGATGTTGCAAAATCCC+AGG | - | chr4.4:15313142-15313161 | MS.gene09021:intron | 45.0% | |
| AGTACCTGATCAATGGCTGA+GGG | + | chr4.4:15310920-15310939 | None:intergenic | 45.0% | |
| CAAGTCCGTGTAATTAGTGC+AGG | + | chr4.4:15313209-15313228 | None:intergenic | 45.0% | |
| CAATATCACATCCAACGCCT+TGG | - | chr4.4:15314799-15314818 | MS.gene09021:intron | 45.0% | |
| CAATTCGACTCTTGCAGATC+AGG | - | chr4.4:15311030-15311049 | MS.gene09021:intron | 45.0% | |
| CATGAGAAATGCCTAAGGTG+TGG | - | chr4.4:15315829-15315848 | MS.gene09021:CDS | 45.0% | |
| CCTTGAATCCTTTCCAACTC+AGG | + | chr4.4:15314366-15314385 | None:intergenic | 45.0% | |
| CCTTGGCATTCACGTTGAAA+CGG | - | chr4.4:15314816-15314835 | MS.gene09021:intron | 45.0% | |
| CTGCAAGAGTCGAATTGATC+GGG | + | chr4.4:15311027-15311046 | None:intergenic | 45.0% | |
| GAAATGCCTAAGGTGTGGAA+TGG | - | chr4.4:15315834-15315853 | MS.gene09021:CDS | 45.0% | |
| GACGAACCTACTTGCATGAA+TGG | + | chr4.4:15314514-15314533 | None:intergenic | 45.0% | |
| GCTAAACAGGTATCTTGGTG+GGG | - | chr4.4:15312666-15312685 | MS.gene09021:intron | 45.0% | |
| GGAAACATGAGATGCATTGC+AGG | - | chr4.4:15312866-15312885 | MS.gene09021:intron | 45.0% | |
| GGAATATGTCAGAACAGCAC+AGG | - | chr4.4:15313445-15313464 | MS.gene09021:CDS | 45.0% | |
| GGAGCATATTCTTCCTGAAG+AGG | + | chr4.4:15311440-15311459 | None:intergenic | 45.0% | |
| GTGCAAGAGAATCAGGCAAA+GGG | - | chr4.4:15311868-15311887 | MS.gene09021:CDS | 45.0% | |
| GTTGGACTGTAGTGTCTTTG+TGG | - | chr4.4:15310732-15310751 | MS.gene09021:CDS | 45.0% | |
| TAGGTGATCCTGGAAGGTTT+CGG | - | chr4.4:15313780-15313799 | MS.gene09021:CDS | 45.0% | |
| TATTCTTCCTGAAGAGGGGA+TGG | + | chr4.4:15311434-15311453 | None:intergenic | 45.0% | |
| TCAGTTCGACGCATGTTTCA+TGG | - | chr4.4:15315323-15315342 | MS.gene09021:intron | 45.0% | |
| TGAAAGGGCTAGGATTGTTC+AGG | - | chr4.4:15310820-15310839 | MS.gene09021:intron | 45.0% | |
| TGCAAGAGAATCAGGCAAAG+GGG | - | chr4.4:15311869-15311888 | MS.gene09021:CDS | 45.0% | |
| TGCTAATAGGTGATCCTGGA+AGG | - | chr4.4:15313774-15313793 | MS.gene09021:CDS | 45.0% | |
| TGTTTATGGTTGACACCCCT+TGG | + | chr4.4:15314855-15314874 | None:intergenic | 45.0% | |
| TTAGCCATCTTCTTGTTGGG+AGG | - | chr4.4:15315172-15315191 | MS.gene09021:CDS | 45.0% | |
| TTCAGTCAAGATGGACCACT+TGG | - | chr4.4:15314388-15314407 | MS.gene09021:intron | 45.0% | |
| TTTACTGCTGTCTTCGCCAA+TGG | - | chr4.4:15314652-15314671 | MS.gene09021:CDS | 45.0% | |
| TTTGAGAGGCCTCTAACAAG+TGG | - | chr4.4:15311272-15311291 | MS.gene09021:CDS | 45.0% | |
| ! | ACAACTTTGGAGGAAAACCG+TGG | + | chr4.4:15314978-15314997 | None:intergenic | 45.0% |
| ! | ACCAGTTCCTCCATGTTTTC+GGG | + | chr4.4:15314542-15314561 | None:intergenic | 45.0% |
| ! | CCTGAGTTGGAAAGGATTCA+AGG | - | chr4.4:15314363-15314382 | MS.gene09021:intron | 45.0% |
| ! | CTCAGGCAACTTTTCACAAC+AGG | + | chr4.4:15314349-15314368 | None:intergenic | 45.0% |
| ! | GATGTGGTTTGTGTTAGCAG+TGG | - | chr4.4:15315267-15315286 | MS.gene09021:CDS | 45.0% |
| ! | GGGGTGTCAACCATAAACAA+AGG | - | chr4.4:15314856-15314875 | MS.gene09021:intron | 45.0% |
| ! | TACCTCGACTCCTTTTCCTT+GGG | + | chr4.4:15313612-15313631 | None:intergenic | 45.0% |
| ! | TATGCCACACCACTTGTTAG+AGG | + | chr4.4:15311284-15311303 | None:intergenic | 45.0% |
| ! | TTACCTCGACTCCTTTTCCT+TGG | + | chr4.4:15313613-15313632 | None:intergenic | 45.0% |
| !! | TGTTGACATGGGTATTGGGT+TGG | - | chr4.4:15310714-15310733 | MS.gene09021:CDS | 45.0% |
| !! | TGTTTGGTTGGCCTCATGAA+TGG | - | chr4.4:15314583-15314602 | MS.gene09021:CDS | 45.0% |
| !! | ATTTATTAAACAAATTAAAA+AGG | + | chr4.4:15313178-15313197 | None:intergenic | 5.0% |
| !!! | TTTTAATTTGTTTAATAAAT+TGG | - | chr4.4:15313178-15313197 | MS.gene09021:intron | 5.0% |
| AAGCTGTCCTGGATAGCTCA+TGG | + | chr4.4:15312324-15312343 | None:intergenic | 50.0% | |
| ACCCATCCATTCCACACCTT+AGG | + | chr4.4:15315843-15315862 | None:intergenic | 50.0% | |
| ACGACACTGACACGTCAACA+CGG | + | chr4.4:15311131-15311150 | None:intergenic | 50.0% | |
| AGGCGGTTTCTGTTTGAACC+TGG | + | chr4.4:15312976-15312995 | None:intergenic | 50.0% | |
| ATTGCAGCACATGGCAAAGG+CGG | + | chr4.4:15312993-15313012 | None:intergenic | 50.0% | |
| CCGTTTCAACGTGAATGCCA+AGG | + | chr4.4:15314819-15314838 | None:intergenic | 50.0% | |
| CGTGCAAGAGAATCAGGCAA+AGG | - | chr4.4:15311867-15311886 | MS.gene09021:CDS | 50.0% | |
| GCATGTGTGATGAAAGGGCT+AGG | - | chr4.4:15310810-15310829 | MS.gene09021:intron | 50.0% | |
| GCCTAAGGTGTGGAATGGAT+GGG | - | chr4.4:15315839-15315858 | MS.gene09021:CDS | 50.0% | |
| GGAGCTTAAAAAACGTGCGG+AGG | - | chr4.4:15313118-15313137 | MS.gene09021:intron | 50.0% | |
| GGCCTCATGAATGGCGAAAT+TGG | - | chr4.4:15314592-15314611 | MS.gene09021:CDS | 50.0% | |
| GGCGGTTTCTGTTTGAACCT+GGG | + | chr4.4:15312975-15312994 | None:intergenic | 50.0% | |
| GTCAGAACAGCACAGGAAAG+TGG | - | chr4.4:15313452-15313471 | MS.gene09021:CDS | 50.0% | |
| GTGTTGCGTGCAAGAGAATC+AGG | - | chr4.4:15311861-15311880 | MS.gene09021:CDS | 50.0% | |
| TCCCGAAAACATGGAGGAAC+TGG | - | chr4.4:15314538-15314557 | MS.gene09021:CDS | 50.0% | |
| TCGATCTCCCGAAAACATGG+AGG | - | chr4.4:15314532-15314551 | MS.gene09021:CDS | 50.0% | |
| TCGTCGATCTCCCGAAAACA+TGG | - | chr4.4:15314529-15314548 | MS.gene09021:CDS | 50.0% | |
| TCTAGGCAAGGTTCGAAAGC+CGG | - | chr4.4:15310997-15311016 | MS.gene09021:intron | 50.0% | |
| TGCCTAAGGTGTGGAATGGA+TGG | - | chr4.4:15315838-15315857 | MS.gene09021:CDS | 50.0% | |
| ! | GTCGAATTGATCGGGAGTAC+CGG | + | chr4.4:15311019-15311038 | None:intergenic | 50.0% |
| !!! | GGGTTTTAACTGCACCCTTC+AGG | - | chr4.4:15311889-15311908 | MS.gene09021:CDS | 50.0% |
| ATTGGAGCCATCCCCTCTTC+AGG | - | chr4.4:15311424-15311443 | MS.gene09021:CDS | 55.0% | |
| CAACGTGAATGCCAAGGCGT+TGG | + | chr4.4:15314813-15314832 | None:intergenic | 55.0% | |
| CATGCGTCGAACTGATGAGG+TGG | + | chr4.4:15315318-15315337 | None:intergenic | 55.0% | |
| CGACACTGACACGTCAACAC+GGG | + | chr4.4:15311130-15311149 | None:intergenic | 55.0% | |
| GAGGCCTCTAACAAGTGGTG+TGG | - | chr4.4:15311277-15311296 | MS.gene09021:CDS | 55.0% | |
| GAGTCCCTCAGCCATTGATC+AGG | - | chr4.4:15310913-15310932 | MS.gene09021:intron | 55.0% | |
| GTCCCAAGGAAAAGGAGTCG+AGG | - | chr4.4:15313607-15313626 | MS.gene09021:intron | 55.0% | |
| GTGAATCGTGCAGTAGCAGC+TGG | - | chr4.4:15315222-15315241 | MS.gene09021:CDS | 55.0% | |
| GCAAGCATGCTTGCCCTGAG+TGG | + | chr4.4:15315081-15315100 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 15310602 | 15315930 | 15310602 | ID=MS.gene09021 |
| chr4.4 | mRNA | 15310602 | 15315930 | 15310602 | ID=MS.gene09021.t1;Parent=MS.gene09021 |
| chr4.4 | exon | 15315598 | 15315930 | 15315598 | ID=MS.gene09021.t1.exon1;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15315598 | 15315930 | 15315598 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| chr4.4 | exon | 15315012 | 15315293 | 15315012 | ID=MS.gene09021.t1.exon2;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15315012 | 15315293 | 15315012 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| chr4.4 | exon | 15314517 | 15314686 | 15314517 | ID=MS.gene09021.t1.exon3;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15314517 | 15314686 | 15314517 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| chr4.4 | exon | 15313645 | 15313857 | 15313645 | ID=MS.gene09021.t1.exon4;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15313645 | 15313857 | 15313645 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| chr4.4 | exon | 15313369 | 15313555 | 15313369 | ID=MS.gene09021.t1.exon5;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15313369 | 15313555 | 15313369 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| chr4.4 | exon | 15313235 | 15313286 | 15313235 | ID=MS.gene09021.t1.exon6;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15313235 | 15313286 | 15313235 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| chr4.4 | exon | 15312904 | 15313133 | 15312904 | ID=MS.gene09021.t1.exon7;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15312904 | 15313133 | 15312904 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| chr4.4 | exon | 15312694 | 15312792 | 15312694 | ID=MS.gene09021.t1.exon8;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15312694 | 15312792 | 15312694 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| chr4.4 | exon | 15311162 | 15312294 | 15311162 | ID=MS.gene09021.t1.exon9;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15311162 | 15312294 | 15311162 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| chr4.4 | exon | 15310602 | 15310815 | 15310602 | ID=MS.gene09021.t1.exon10;Parent=MS.gene09021.t1 |
| chr4.4 | CDS | 15310602 | 15310815 | 15310602 | ID=cds.MS.gene09021.t1;Parent=MS.gene09021.t1 |
| Gene Sequence |
| Protein sequence |
