Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22983.t1 | AES61808.2 | 73.5 | 113 | 20 | 2 | 55 | 157 | 1 | 113 | 2.60E-31 | 145.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22983.t1 | Q8GW48 | 62.6 | 91 | 16 | 1 | 55 | 145 | 1 | 73 | 7.9e-21 | 101.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22983.t1 | G7IF89 | 73.5 | 113 | 20 | 2 | 55 | 157 | 1 | 113 | 1.9e-31 | 145.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene22983 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene050303 | MS.gene22983 | 0.831094 | 2.03E-55 | -1.69E-46 |
| MS.gene050330 | MS.gene22983 | -0.804333 | 2.27E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene22983 | 0.800448 | 1.43E-48 | -1.69E-46 |
| MS.gene050721 | MS.gene22983 | 0.801419 | 9.09E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene22983 | 0.83531 | 1.81E-56 | -1.69E-46 |
| MS.gene051063 | MS.gene22983 | 0.811912 | 5.52E-51 | -1.69E-46 |
| MS.gene051088 | MS.gene22983 | 0.801077 | 1.07E-48 | -1.69E-46 |
| MS.gene051330 | MS.gene22983 | 0.801123 | 1.04E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene22983 | 0.831627 | 1.50E-55 | -1.69E-46 |
| MS.gene052048 | MS.gene22983 | -0.833923 | 4.03E-56 | -1.69E-46 |
| MS.gene052256 | MS.gene22983 | 0.807464 | 4.99E-50 | -1.69E-46 |
| MS.gene052286 | MS.gene22983 | 0.805277 | 1.44E-49 | -1.69E-46 |
| MS.gene052302 | MS.gene22983 | 0.833435 | 5.34E-56 | -1.69E-46 |
| MS.gene052309 | MS.gene22983 | -0.81354 | 2.43E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene22983 | 0.842886 | 1.97E-58 | -1.69E-46 |
| MS.gene053132 | MS.gene22983 | 0.807264 | 5.50E-50 | -1.69E-46 |
| MS.gene056069 | MS.gene22983 | -0.811231 | 7.76E-51 | -1.69E-46 |
| MS.gene056631 | MS.gene22983 | 0.839756 | 1.31E-57 | -1.69E-46 |
| MS.gene057140 | MS.gene22983 | 0.807979 | 3.88E-50 | -1.69E-46 |
| MS.gene057260 | MS.gene22983 | 0.840295 | 9.48E-58 | -1.69E-46 |
| MS.gene058084 | MS.gene22983 | 0.815291 | 9.97E-52 | -1.69E-46 |
| MS.gene058182 | MS.gene22983 | 0.807008 | 6.23E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene22983 | 0.802899 | 4.51E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene22983 | 0.851438 | 8.87E-61 | -1.69E-46 |
| MS.gene059033 | MS.gene22983 | -0.804473 | 2.12E-49 | -1.69E-46 |
| MS.gene059898 | MS.gene22983 | 0.80052 | 1.39E-48 | -1.69E-46 |
| MS.gene06001 | MS.gene22983 | 0.847835 | 8.99E-60 | -1.69E-46 |
| MS.gene060429 | MS.gene22983 | 0.811717 | 6.09E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene22983 | 0.800907 | 1.16E-48 | -1.69E-46 |
| MS.gene061040 | MS.gene22983 | -0.809749 | 1.62E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22983.t1 | MTR_1g088760 | 72.277 | 101 | 18 | 2 | 55 | 145 | 1 | 101 | 7.22e-44 | 141 |
| MS.gene22983.t1 | MTR_7g108610 | 98.182 | 55 | 1 | 0 | 105 | 159 | 4 | 58 | 8.33e-32 | 108 |
| MS.gene22983.t1 | MTR_7g108615 | 97.826 | 46 | 1 | 0 | 55 | 100 | 1 | 46 | 3.65e-26 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22983.t1 | AT4G15802 | 65.934 | 91 | 13 | 1 | 55 | 145 | 1 | 73 | 9.14e-36 | 119 |
Find 28 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTCCTTTGGCTTAAC+AGG | 0.188103 | 7.2:-6438577 | None:intergenic |
| TTCTTCAACTCTTCTTCCTT+TGG | 0.264374 | 7.2:-6438586 | None:intergenic |
| CTCCATTGCACTTGACGAAA+TGG | 0.318487 | 7.2:+6438471 | MS.gene22983:CDS |
| TATCAGCAGTGCTTTGCTTT+GGG | 0.323861 | 7.2:-6437093 | None:intergenic |
| TTTGCTCCAACTCATTTATA+CGG | 0.341193 | 7.2:-6438498 | None:intergenic |
| ATATCAGCAGTGCTTTGCTT+TGG | 0.352557 | 7.2:-6437094 | None:intergenic |
| AAGGATATTCTTTGAAATGA+TGG | 0.382548 | 7.2:-6437776 | None:intergenic |
| TGATGGAGTCAGACATTGTC+TGG | 0.417004 | 7.2:-6437759 | None:intergenic |
| GAAGAAGAGTTGAAGAAAGA+AGG | 0.438310 | 7.2:+6438592 | MS.gene22983:CDS |
| AGAGTTGAAGAAAGAAGGTT+CGG | 0.449130 | 7.2:+6438597 | MS.gene22983:CDS |
| CTTCTTCCTTTGGCTTAACA+GGG | 0.455044 | 7.2:-6438576 | None:intergenic |
| TCCATTGCACTTGACGAAAT+GGG | 0.463583 | 7.2:+6438472 | MS.gene22983:CDS |
| CGTTGTTCAAAATTCAATCA+TGG | 0.466642 | 7.2:+6436715 | MS.gene22983:CDS |
| TCCCATTTCGTCAAGTGCAA+TGG | 0.503588 | 7.2:-6438473 | None:intergenic |
| TTTGGCTTAACAGGGGCCAC+AGG | 0.519684 | 7.2:-6438568 | None:intergenic |
| AACAACGGACGCTTCAGGAA+TGG | 0.520693 | 7.2:-6436699 | None:intergenic |
| AATGATCTAAGAGCAGAGAT+AGG | 0.523528 | 7.2:+6438526 | MS.gene22983:CDS |
| TTAACAGGGGCCACAGGTGA+TGG | 0.536917 | 7.2:-6438562 | None:intergenic |
| GGGAAGCCGTATAAATGAGT+TGG | 0.537396 | 7.2:+6438492 | MS.gene22983:CDS |
| AATTTGAAGAATGTCTGAAA+AGG | 0.540946 | 7.2:-6437795 | None:intergenic |
| CGTCAAGTGCAATGGAGTCA+AGG | 0.574205 | 7.2:-6438465 | None:intergenic |
| CGGACGCTTCAGGAATGGAA+TGG | 0.576703 | 7.2:-6436694 | None:intergenic |
| GCAAAATCTTCTTCAGCAGA+TGG | 0.581242 | 7.2:+6437640 | MS.gene22983:CDS |
| TTCTTCCTTTGGCTTAACAG+GGG | 0.582674 | 7.2:-6438575 | None:intergenic |
| GCTTCAGGAATGGAATGGAA+TGG | 0.595190 | 7.2:-6436689 | None:intergenic |
| GGAGAGCTCTCCATCACCTG+TGG | 0.611676 | 7.2:+6438552 | MS.gene22983:CDS |
| TGTGGCCCCTGTTAAGCCAA+AGG | 0.613893 | 7.2:+6438570 | MS.gene22983:CDS |
| TCTAAGAGCAGAGATAGGTG+TGG | 0.632628 | 7.2:+6438531 | MS.gene22983:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAAAAAATGATATTTACA+GGG | - | chr7.2:6437908-6437927 | None:intergenic | 15.0% |
| !! | TAAAAAAATGATATTTACAG+GGG | - | chr7.2:6437907-6437926 | None:intergenic | 15.0% |
| !! | TCTAAAAAAATGATATTTAC+AGG | - | chr7.2:6437909-6437928 | None:intergenic | 15.0% |
| !! | AAATCACGAAAAATTCAAAA+TGG | - | chr7.2:6436967-6436986 | None:intergenic | 20.0% |
| !! | AAGAAACTAATTTCAGAAAA+TGG | + | chr7.2:6437855-6437874 | MS.gene22983:intron | 20.0% |
| !! | ATATAGTGTATCATGTATAT+TGG | + | chr7.2:6438280-6438299 | MS.gene22983:intron | 20.0% |
| !! | ATTGGTTGAATATTGAAATT+AGG | - | chr7.2:6436853-6436872 | None:intergenic | 20.0% |
| !! | ATTTCAATATTCAACCAATT+AGG | + | chr7.2:6436854-6436873 | MS.gene22983:intron | 20.0% |
| !! | GAGGAAAATAGTATAAAAAT+TGG | + | chr7.2:6437297-6437316 | MS.gene22983:intron | 20.0% |
| !! | TATATCGTAATCATTCAAAT+AGG | + | chr7.2:6437939-6437958 | MS.gene22983:intron | 20.0% |
| !! | TCAACAATATGAATAATAAC+AGG | - | chr7.2:6438434-6438453 | None:intergenic | 20.0% |
| !! | TTGGTTGAATATTGAAATTA+GGG | - | chr7.2:6436852-6436871 | None:intergenic | 20.0% |
| !! | TTTCAATATTCAACCAATTA+GGG | + | chr7.2:6436855-6436874 | MS.gene22983:intron | 20.0% |
| !!! | AAAAATATATTTAAGAGCAC+AGG | - | chr7.2:6438003-6438022 | None:intergenic | 20.0% |
| !!! | CAAATTTCAATTTTTCACAA+GGG | + | chr7.2:6436506-6436525 | MS.gene22983:CDS | 20.0% |
| !!! | TCAAATTTCAATTTTTCACA+AGG | + | chr7.2:6436505-6436524 | MS.gene22983:CDS | 20.0% |
| !!! | TTTTTTTCAAGGAATATCTT+TGG | + | chr7.2:6438020-6438039 | MS.gene22983:intron | 20.0% |
| ! | AATTTGAAGAATGTCTGAAA+AGG | - | chr7.2:6437798-6437817 | None:intergenic | 25.0% |
| ! | AGTGATACTAATTCTATTTC+AGG | + | chr7.2:6438320-6438339 | MS.gene22983:intron | 25.0% |
| ! | CCTAATATTACAAGACAAAA+TGG | + | chr7.2:6436543-6436562 | MS.gene22983:intron | 25.0% |
| ! | CTAGTATTAGTAACTTAGTT+GGG | + | chr7.2:6437202-6437221 | MS.gene22983:intron | 25.0% |
| ! | CTATCATCAAAAGAGAAAAA+AGG | - | chr7.2:6437053-6437072 | None:intergenic | 25.0% |
| ! | TAAATATGCCATTGTGTTAT+AGG | - | chr7.2:6438134-6438153 | None:intergenic | 25.0% |
| ! | TAACAACACTTTGTACAAAA+CGG | - | chr7.2:6437418-6437437 | None:intergenic | 25.0% |
| ! | TTCAAAATTCAATCATGGTA+AGG | + | chr7.2:6436720-6436739 | MS.gene22983:intron | 25.0% |
| ! | TTTGGTTATATGGTGTTTAA+AGG | + | chr7.2:6438060-6438079 | MS.gene22983:intron | 25.0% |
| !! | ACTAATTCTATTTCAGGTAT+CGG | + | chr7.2:6438326-6438345 | MS.gene22983:intron | 25.0% |
| !! | CATGATTGAATTTTGAACAA+CGG | - | chr7.2:6436717-6436736 | None:intergenic | 25.0% |
| !! | CCATTTTGTCTTGTAATATT+AGG | - | chr7.2:6436546-6436565 | None:intergenic | 25.0% |
| !! | TATCCTTTAACTTTACTTTG+TGG | + | chr7.2:6436587-6436606 | MS.gene22983:intron | 25.0% |
| !!! | AAGGATATTCTTTGAAATGA+TGG | - | chr7.2:6437779-6437798 | None:intergenic | 25.0% |
| !!! | CTTTTTTCTCTTTTGATGAT+AGG | + | chr7.2:6437051-6437070 | MS.gene22983:intron | 25.0% |
| AACATGATCAGAAATCAATG+TGG | - | chr7.2:6437231-6437250 | None:intergenic | 30.0% | |
| AACTCAAACCTATAACACAA+TGG | + | chr7.2:6438123-6438142 | MS.gene22983:intron | 30.0% | |
| AAGGAATATCTTTGGTGAAT+TGG | + | chr7.2:6438028-6438047 | MS.gene22983:intron | 30.0% | |
| ATAAATCATGCACATCTGTA+AGG | - | chr7.2:6438234-6438253 | None:intergenic | 30.0% | |
| ATAGTTTGAAAGTTTGAGCA+CGG | - | chr7.2:6436926-6436945 | None:intergenic | 30.0% | |
| ATTCAAAATGGAAACCAACT+AGG | - | chr7.2:6436955-6436974 | None:intergenic | 30.0% | |
| CAATATCCATGTGATACAAT+TGG | - | chr7.2:6438403-6438422 | None:intergenic | 30.0% | |
| CGATAATAATTTACCATCAG+TGG | - | chr7.2:6438164-6438183 | None:intergenic | 30.0% | |
| CGTTGTTCAAAATTCAATCA+TGG | + | chr7.2:6436715-6436734 | MS.gene22983:CDS | 30.0% | |
| CTTTGTCAAATGTTACTATC+AGG | - | chr7.2:6437327-6437346 | None:intergenic | 30.0% | |
| GCTAGTATTAGTAACTTAGT+TGG | + | chr7.2:6437201-6437220 | MS.gene22983:intron | 30.0% | |
| GTGTCTTGAAAAGTTAAAGT+TGG | + | chr7.2:6438094-6438113 | MS.gene22983:intron | 30.0% | |
| GTTGTGTAAGTTTGGTTATA+TGG | + | chr7.2:6438050-6438069 | MS.gene22983:intron | 30.0% | |
| TTTGCTCCAACTCATTTATA+CGG | - | chr7.2:6438501-6438520 | None:intergenic | 30.0% | |
| ! | CACAAATCACATTAAGTTGT+AGG | - | chr7.2:6438259-6438278 | None:intergenic | 30.0% |
| ! | TTTATACTATTTTCCTCTCG+CGG | - | chr7.2:6437294-6437313 | None:intergenic | 30.0% |
| !! | AATTTTGTTTCCAGCAAACT+AGG | + | chr7.2:6437734-6437753 | MS.gene22983:intron | 30.0% |
| AAGACAAAATCAGTACACGA+TGG | - | chr7.2:6437546-6437565 | None:intergenic | 35.0% | |
| AATGATCTAAGAGCAGAGAT+AGG | + | chr7.2:6438526-6438545 | MS.gene22983:CDS | 35.0% | |
| ACAAGACAAAATGGTCCTTA+CGG | + | chr7.2:6436552-6436571 | MS.gene22983:intron | 35.0% | |
| AGAGTTGAAGAAAGAAGGTT+CGG | + | chr7.2:6438597-6438616 | MS.gene22983:CDS | 35.0% | |
| AGTTCTATACTCTAGGTTCA+TGG | + | chr7.2:6437665-6437684 | MS.gene22983:intron | 35.0% | |
| ATATTCATGCCAAATCCGTA+AGG | - | chr7.2:6436570-6436589 | None:intergenic | 35.0% | |
| ATTAGTATCACTACTCATCC+TGG | - | chr7.2:6438312-6438331 | None:intergenic | 35.0% | |
| CAAACTATGAGTAACCTAGT+TGG | + | chr7.2:6436938-6436957 | MS.gene22983:intron | 35.0% | |
| CTGATACCAATTGTATCACA+TGG | + | chr7.2:6438394-6438413 | MS.gene22983:intron | 35.0% | |
| GAAGAAGAGTTGAAGAAAGA+AGG | + | chr7.2:6438592-6438611 | MS.gene22983:CDS | 35.0% | |
| GGTCCACAAAGTAAAGTTAA+AGG | - | chr7.2:6436593-6436612 | None:intergenic | 35.0% | |
| GTGAATTGGTTGTGTAAGTT+TGG | + | chr7.2:6438042-6438061 | MS.gene22983:intron | 35.0% | |
| TATTTACACAACACCACTGA+TGG | + | chr7.2:6438148-6438167 | MS.gene22983:intron | 35.0% | |
| TTCTTCAACTCTTCTTCCTT+TGG | - | chr7.2:6438589-6438608 | None:intergenic | 35.0% | |
| ! | AGCTAGAGAGAGTCTTTTAT+TGG | + | chr7.2:6436615-6436634 | MS.gene22983:intron | 35.0% |
| ! | AGGCTTAACAAGCACATTTT+CGG | - | chr7.2:6436891-6436910 | None:intergenic | 35.0% |
| ! | CATGTATATTGGCTAAAACC+AGG | + | chr7.2:6438291-6438310 | MS.gene22983:intron | 35.0% |
| ! | TAAAAGACTCTCTCTAGCTT+AGG | - | chr7.2:6436614-6436633 | None:intergenic | 35.0% |
| ! | TTCAATTTTTCACAAGGGAG+CGG | + | chr7.2:6436511-6436530 | MS.gene22983:CDS | 35.0% |
| !!! | GCATTTGACAACACTGATTT+TGG | + | chr7.2:6437500-6437519 | MS.gene22983:intron | 35.0% |
| AAAAAGAGAGAGAGAGAGAG+AGG | - | chr7.2:6436749-6436768 | None:intergenic | 40.0% | |
| AAAAGAGAGAATGAGGGCAA+AGG | - | chr7.2:6437615-6437634 | None:intergenic | 40.0% | |
| AAAAGAGAGAGAGAGAGAGA+GGG | - | chr7.2:6436748-6436767 | None:intergenic | 40.0% | |
| ATATCAGCAGTGCTTTGCTT+TGG | - | chr7.2:6437097-6437116 | None:intergenic | 40.0% | |
| CAAAATGGTCCTTACGGATT+TGG | + | chr7.2:6436558-6436577 | MS.gene22983:intron | 40.0% | |
| CACCTGAAAAGAGAGAATGA+GGG | - | chr7.2:6437621-6437640 | None:intergenic | 40.0% | |
| GATGGTGAGTTCTATACTCT+AGG | + | chr7.2:6437658-6437677 | MS.gene22983:intron | 40.0% | |
| GCAAAATCTTCTTCAGCAGA+TGG | + | chr7.2:6437640-6437659 | MS.gene22983:CDS | 40.0% | |
| TATCAGCAGTGCTTTGCTTT+GGG | - | chr7.2:6437096-6437115 | None:intergenic | 40.0% | |
| TCCATTGCACTTGACGAAAT+GGG | + | chr7.2:6438472-6438491 | MS.gene22983:CDS | 40.0% | |
| TTGTACAAAACGGCGTATCA+CGG | - | chr7.2:6437408-6437427 | None:intergenic | 40.0% | |
| ! | CGGATTTTGCAAACCCTAAT+TGG | - | chr7.2:6436871-6436890 | None:intergenic | 40.0% |
| ! | CTTCTTCCTTTGGCTTAACA+GGG | - | chr7.2:6438579-6438598 | None:intergenic | 40.0% |
| ! | TCGTGAGAAAAGCATAAGCA+GGG | - | chr7.2:6436825-6436844 | None:intergenic | 40.0% |
| ! | TCTTCTTCCTTTGGCTTAAC+AGG | - | chr7.2:6438580-6438599 | None:intergenic | 40.0% |
| ! | TTCTTCCTTTGGCTTAACAG+GGG | - | chr7.2:6438578-6438597 | None:intergenic | 40.0% |
| !! | AAAGATTTTAGCCAGTGCTG+TGG | + | chr7.2:6437343-6437362 | MS.gene22983:intron | 40.0% |
| CTCCATTGCACTTGACGAAA+TGG | + | chr7.2:6438471-6438490 | MS.gene22983:CDS | 45.0% | |
| GAGCACGGTAAAGATTTACG+AGG | - | chr7.2:6436911-6436930 | None:intergenic | 45.0% | |
| GCACCTGAAAAGAGAGAATG+AGG | - | chr7.2:6437622-6437641 | None:intergenic | 45.0% | |
| GCTTCAGGAATGGAATGGAA+TGG | - | chr7.2:6436692-6436711 | None:intergenic | 45.0% | |
| GGGAAGCCGTATAAATGAGT+TGG | + | chr7.2:6438492-6438511 | MS.gene22983:CDS | 45.0% | |
| TCCCATTTCGTCAAGTGCAA+TGG | - | chr7.2:6438476-6438495 | None:intergenic | 45.0% | |
| TCTAAGAGCAGAGATAGGTG+TGG | + | chr7.2:6438531-6438550 | MS.gene22983:CDS | 45.0% | |
| TGATGGAGTCAGACATTGTC+TGG | - | chr7.2:6437762-6437781 | None:intergenic | 45.0% | |
| ! | ATACTATTTTCCTCTCGCGG+TGG | - | chr7.2:6437291-6437310 | None:intergenic | 45.0% |
| ! | CTCGTGAGAAAAGCATAAGC+AGG | - | chr7.2:6436826-6436845 | None:intergenic | 45.0% |
| ! | TGCCCTCATTCTCTCTTTTC+AGG | + | chr7.2:6437616-6437635 | MS.gene22983:intron | 45.0% |
| ! | TTGTCTGGAACCTAGTTTGC+TGG | - | chr7.2:6437747-6437766 | None:intergenic | 45.0% |
| ! | TTTTGAACAACGGACGCTTC+AGG | - | chr7.2:6436707-6436726 | None:intergenic | 45.0% |
| !!! | TTAAATATATTTTTTTTTCA+AGG | + | chr7.2:6438009-6438028 | MS.gene22983:intron | 5.0% |
| AACAACGGACGCTTCAGGAA+TGG | - | chr7.2:6436702-6436721 | None:intergenic | 50.0% | |
| CGTCAAGTGCAATGGAGTCA+AGG | - | chr7.2:6438468-6438487 | None:intergenic | 50.0% | |
| ACACTACAGCACCACAGCAC+TGG | - | chr7.2:6437357-6437376 | None:intergenic | 55.0% | |
| CGGACGCTTCAGGAATGGAA+TGG | - | chr7.2:6436697-6436716 | None:intergenic | 55.0% | |
| TGTGGCCCCTGTTAAGCCAA+AGG | + | chr7.2:6438570-6438589 | MS.gene22983:CDS | 55.0% | |
| TTAACAGGGGCCACAGGTGA+TGG | - | chr7.2:6438565-6438584 | None:intergenic | 55.0% | |
| ! | TTTGGCTTAACAGGGGCCAC+AGG | - | chr7.2:6438571-6438590 | None:intergenic | 55.0% |
| !! | GCTGTGGTGCTGTAGTGTAG+CGG | + | chr7.2:6437359-6437378 | MS.gene22983:intron | 55.0% |
| GGAGAGCTCTCCATCACCTG+TGG | + | chr7.2:6438552-6438571 | MS.gene22983:CDS | 60.0% | |
| CCTATGCTGTCCACCGCGAG+AGG | + | chr7.2:6437278-6437297 | MS.gene22983:intron | 65.0% | |
| CCTCTCGCGGTGGACAGCAT+AGG | - | chr7.2:6437281-6437300 | None:intergenic | 65.0% | |
| CGCGGTGGACAGCATAGGCT+TGG | - | chr7.2:6437276-6437295 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 6436488 | 6438624 | 6436488 | ID=MS.gene22983 |
| chr7.2 | mRNA | 6436488 | 6438624 | 6436488 | ID=MS.gene22983.t1;Parent=MS.gene22983 |
| chr7.2 | exon | 6436488 | 6436532 | 6436488 | ID=MS.gene22983.t1.exon1;Parent=MS.gene22983.t1 |
| chr7.2 | CDS | 6436488 | 6436532 | 6436488 | ID=cds.MS.gene22983.t1;Parent=MS.gene22983.t1 |
| chr7.2 | exon | 6436617 | 6436736 | 6436617 | ID=MS.gene22983.t1.exon2;Parent=MS.gene22983.t1 |
| chr7.2 | CDS | 6436617 | 6436736 | 6436617 | ID=cds.MS.gene22983.t1;Parent=MS.gene22983.t1 |
| chr7.2 | exon | 6437073 | 6437126 | 6437073 | ID=MS.gene22983.t1.exon3;Parent=MS.gene22983.t1 |
| chr7.2 | CDS | 6437073 | 6437126 | 6437073 | ID=cds.MS.gene22983.t1;Parent=MS.gene22983.t1 |
| chr7.2 | exon | 6437638 | 6437661 | 6437638 | ID=MS.gene22983.t1.exon4;Parent=MS.gene22983.t1 |
| chr7.2 | CDS | 6437638 | 6437661 | 6437638 | ID=cds.MS.gene22983.t1;Parent=MS.gene22983.t1 |
| chr7.2 | exon | 6437748 | 6437817 | 6437748 | ID=MS.gene22983.t1.exon5;Parent=MS.gene22983.t1 |
| chr7.2 | CDS | 6437748 | 6437817 | 6437748 | ID=cds.MS.gene22983.t1;Parent=MS.gene22983.t1 |
| chr7.2 | exon | 6438455 | 6438624 | 6438455 | ID=MS.gene22983.t1.exon6;Parent=MS.gene22983.t1 |
| chr7.2 | CDS | 6438455 | 6438624 | 6438455 | ID=cds.MS.gene22983.t1;Parent=MS.gene22983.t1 |
| Gene Sequence |
| Protein sequence |
