AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47475


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47475.t1 MTR_8g066975 97.643 297 7 0 1 297 1 297 0.0 582
MS.gene47475.t1 MTR_5g030530 84.848 297 45 0 1 297 1 297 0.0 521
MS.gene47475.t1 MTR_4g012850 36.332 289 166 6 6 291 14 287 2.43e-46 158
MS.gene47475.t1 MTR_4g088545 34.516 310 181 9 1 297 1 301 5.88e-44 152
MS.gene47475.t1 MTR_2g102010 34.333 300 178 6 1 296 10 294 2.76e-43 150
MS.gene47475.t1 MTR_2g436930 29.467 319 184 9 9 296 16 324 1.03e-34 128
MS.gene47475.t1 MTR_5g009500 31.761 318 181 7 4 297 34 339 2.37e-33 125
MS.gene47475.t1 MTR_5g009500 29.412 204 128 4 100 296 30 224 4.26e-14 72.0
MS.gene47475.t1 MTR_4g088545 34.241 257 150 7 1 245 1 250 3.02e-33 123
MS.gene47475.t1 MTR_4g088545 27.461 193 128 4 106 293 10 195 1.99e-14 72.0
MS.gene47475.t1 MTR_8g027975 31.056 322 184 8 2 297 45 354 3.41e-31 119
MS.gene47475.t1 MTR_4g119770 27.554 323 191 8 7 296 13 325 4.12e-31 119
MS.gene47475.t1 MTR_7g109135 32.130 277 176 6 24 296 38 306 2.89e-29 114
MS.gene47475.t1 MTR_7g109135 32.738 168 106 2 111 276 25 187 5.24e-17 80.1
MS.gene47475.t1 MTR_3g025800 30.312 320 186 12 4 297 24 332 3.22e-28 111
MS.gene47475.t1 MTR_3g025800 27.727 220 121 6 101 295 21 227 1.03e-13 70.9
MS.gene47475.t1 MTR_4g088545 33.636 220 133 6 1 214 1 213 4.32e-28 108
MS.gene47475.t1 MTR_4g088545 27.461 193 128 4 106 293 10 195 8.74e-15 72.8
MS.gene47475.t1 MTR_1g087840 30.686 277 180 6 24 296 35 303 3.47e-27 108
MS.gene47475.t1 MTR_5g055410 30.851 282 173 9 24 296 37 305 4.46e-27 108
MS.gene47475.t1 MTR_5g055410 26.882 186 109 7 23 197 134 303 6.99e-12 65.5
MS.gene47475.t1 MTR_7g109135 32.627 236 147 6 65 296 1 228 1.27e-24 99.8
MS.gene47475.t1 MTR_7g109135 30.686 277 173 6 24 296 38 299 3.10e-24 100
MS.gene47475.t1 MTR_7g109135 30.357 168 103 3 111 276 25 180 3.01e-13 69.3
MS.gene47475.t1 MTR_1g090330 27.076 277 191 6 24 297 30 298 6.33e-24 99.0
MS.gene47475.t1 MTR_1g090330 27.179 195 134 4 4 197 108 295 9.57e-16 76.3
MS.gene47475.t1 MTR_6g034515 30.249 281 168 6 23 296 82 341 3.40e-23 98.2
MS.gene47475.t1 MTR_3g104600 28.758 306 196 7 6 297 33 330 3.76e-23 97.8
MS.gene47475.t1 MTR_7g109135 33.019 212 130 6 89 296 4 207 2.18e-21 90.5
MS.gene47475.t1 MTR_2g436930 28.395 243 142 7 76 296 2 234 4.38e-21 90.1
MS.gene47475.t1 MTR_2g436930 26.768 198 122 6 10 193 40 228 4.25e-13 67.8
MS.gene47475.t1 MTR_8g098240 28.866 291 180 8 10 297 322 588 4.80e-21 93.6
MS.gene47475.t1 MTR_7g084400 28.136 295 184 7 8 296 213 485 6.71e-21 92.8
MS.gene47475.t1 MTR_7g084400 26.633 199 130 2 99 294 204 389 5.71e-11 63.2
MS.gene47475.t1 MTR_4g114320 23.891 293 202 4 6 296 121 394 8.29e-21 92.0
MS.gene47475.t1 MTR_5g073040 30.667 300 169 12 8 294 39 312 1.02e-20 90.9
MS.gene47475.t1 MTR_5g073040 27.451 204 127 9 96 297 29 213 3.83e-11 63.2
MS.gene47475.t1 MTR_8g076760 26.552 290 172 11 23 290 29 299 1.19e-20 90.5
MS.gene47475.t1 MTR_8g076760 29.146 199 120 7 8 195 113 301 5.35e-15 74.3
MS.gene47475.t1 MTR_8g076760 30.857 175 111 5 124 296 30 196 4.47e-12 65.9
MS.gene47475.t1 MTR_6g091800 25.333 300 207 6 5 296 16 306 1.34e-20 90.1
MS.gene47475.t1 MTR_4g018750 29.808 208 130 4 1 206 110 303 2.21e-20 89.4
MS.gene47475.t1 MTR_4g018750 28.929 280 173 10 24 293 31 294 2.87e-19 86.3
MS.gene47475.t1 MTR_4g018750 27.861 201 139 3 100 296 7 205 3.95e-16 77.4
MS.gene47475.t1 MTR_1g012030 25.170 294 197 6 6 296 137 410 3.75e-20 90.1
MS.gene47475.t1 MTR_4g057850 28.571 287 178 10 10 286 24 293 9.92e-20 87.8
MS.gene47475.t1 MTR_4g057850 30.556 180 114 4 19 195 128 299 6.60e-15 73.9
MS.gene47475.t1 MTR_3g104500 26.490 302 202 11 2 293 28 319 1.09e-19 87.8
MS.gene47475.t1 MTR_3g107510 24.490 294 199 6 6 296 120 393 1.77e-19 88.2
MS.gene47475.t1 MTR_3g462140 29.856 278 174 7 24 293 31 295 2.07e-19 86.7
MS.gene47475.t1 MTR_3g462140 30.601 183 114 2 19 201 131 300 1.24e-18 84.3
MS.gene47475.t1 MTR_3g462140 30.693 202 131 5 101 296 8 206 2.26e-17 80.9
MS.gene47475.t1 MTR_4g119770 26.459 257 156 6 7 240 13 259 2.51e-19 85.9
MS.gene47475.t1 MTR_4g119770 29.688 192 119 6 111 290 17 204 9.44e-13 67.4
MS.gene47475.t1 MTR_7g066690 29.329 283 168 11 24 293 33 296 3.89e-19 85.9
MS.gene47475.t1 MTR_7g066690 27.835 194 127 2 4 197 117 297 3.21e-18 83.6
MS.gene47475.t1 MTR_7g066690 27.461 193 134 3 108 296 17 207 2.92e-15 75.1
MS.gene47475.t1 MTR_3g098460 27.425 299 190 8 5 296 202 480 5.21e-19 87.0
MS.gene47475.t1 MTR_5g081910 25.890 309 194 8 20 297 20 324 3.00e-17 81.3
MS.gene47475.t1 MTR_8g096050 25.850 294 195 6 8 296 227 502 4.22e-17 81.6
MS.gene47475.t1 MTR_6g091800 23.457 324 207 6 5 296 16 330 5.57e-17 80.5
MS.gene47475.t1 MTR_4g018750 27.861 201 139 3 100 296 7 205 4.62e-16 77.0
MS.gene47475.t1 MTR_4g018750 30.769 143 97 1 1 141 110 252 1.69e-14 72.8
MS.gene47475.t1 MTR_4g018750 28.279 244 149 10 24 257 31 258 6.67e-13 68.2
MS.gene47475.t1 MTR_6g091800 26.141 241 164 5 5 240 16 247 8.45e-16 75.9
MS.gene47475.t1 MTR_6g091800 26.141 241 164 5 5 240 16 247 9.43e-16 75.9
MS.gene47475.t1 MTR_1g097890 27.715 267 152 8 10 273 53 281 2.94e-15 75.1
MS.gene47475.t1 MTR_1g097890 32.973 185 94 4 109 293 52 206 5.29e-15 74.3
MS.gene47475.t1 MTR_1g097890 31.088 193 114 5 8 200 132 305 9.25e-13 67.8
MS.gene47475.t1 MTR_6g034145 24.506 253 179 5 52 296 4 252 4.41e-15 73.9
MS.gene47475.t1 MTR_7g068340 25.448 279 179 8 24 297 103 357 7.22e-15 74.7
MS.gene47475.t1 MTR_8g092080 28.470 281 150 10 3 273 43 282 9.12e-15 73.9
MS.gene47475.t1 MTR_8g092080 31.646 158 96 4 142 293 56 207 9.72e-13 67.8
MS.gene47475.t1 MTR_5g081150 25.828 302 199 5 7 296 33 321 4.78e-14 71.6
MS.gene47475.t1 MTR_5g081150 31.683 202 123 5 3 200 132 322 1.68e-11 64.3
MS.gene47475.t1 MTR_6g091800 23.077 299 189 6 5 271 16 305 5.49e-14 71.6
MS.gene47475.t1 MTR_1g088995 27.660 282 180 8 21 297 46 308 6.87e-14 71.2
MS.gene47475.t1 MTR_5g081910 28.302 212 128 5 108 297 41 250 9.28e-14 70.1
MS.gene47475.t1 MTR_7g015870 27.241 290 174 13 23 293 40 311 1.50e-13 70.1
MS.gene47475.t1 MTR_7g015870 29.902 204 127 6 92 289 9 202 1.13e-12 67.8
MS.gene47475.t1 MTR_3g100570 27.805 205 121 6 4 197 120 308 2.66e-13 69.3
MS.gene47475.t1 MTR_7g015870 27.526 287 171 13 23 290 36 304 3.73e-13 69.3
MS.gene47475.t1 MTR_7g015870 30.319 188 115 6 108 289 21 198 1.02e-11 65.1
MS.gene47475.t1 MTR_7g064980 27.835 194 129 4 3 196 129 311 4.08e-13 68.9
MS.gene47475.t1 MTR_7g064980 25.566 309 204 9 1 296 19 314 3.68e-12 66.2
MS.gene47475.t1 MTR_6g092210 24.096 249 179 5 52 296 4 246 5.55e-13 67.8
MS.gene47475.t1 MTR_6g015860 24.739 287 185 9 23 293 32 303 1.73e-12 67.0
MS.gene47475.t1 MTR_6g015860 26.842 190 123 5 106 289 15 194 5.98e-11 62.8
MS.gene47475.t1 MTR_3g028590 26.667 285 184 9 7 279 96 367 1.90e-12 67.4
MS.gene47475.t1 MTR_3g028590 26.667 285 184 9 7 279 92 363 1.92e-12 67.4
MS.gene47475.t1 MTR_6g091800 23.774 265 164 5 5 240 16 271 2.39e-12 66.6
MS.gene47475.t1 MTR_2g032610 25.338 296 193 9 11 291 32 314 2.54e-12 66.6
MS.gene47475.t1 MTR_6g091800 23.774 265 164 5 5 240 16 271 3.26e-12 66.2
MS.gene47475.t1 MTR_8g036880 25.862 290 191 9 2 279 96 373 9.68e-12 65.5
MS.gene47475.t1 MTR_3g074490 25.651 269 167 8 48 296 148 403 1.24e-11 65.1
MS.gene47475.t1 MTR_5g032420 27.358 318 189 11 14 296 9 319 1.49e-11 64.3
MS.gene47475.t1 MTR_8g068890 25.962 312 194 9 14 296 9 312 1.71e-11 64.3
MS.gene47475.t1 MTR_3g090820 27.636 275 174 10 43 297 119 388 2.03e-11 64.3
MS.gene47475.t1 MTR_4g005330 24.581 179 122 2 119 296 121 287 4.48e-11 62.8
MS.gene47475.t1 MTR_8g090210 25.094 267 167 7 50 296 144 397 4.88e-11 63.2
MS.gene47475.t1 MTR_4g005330 24.581 179 122 2 119 296 187 353 6.28e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47475.t1 AT5G46800 79.667 300 58 1 1 297 1 300 1.32e-174 484
MS.gene47475.t1 AT5G46800 79.667 300 58 1 1 297 1 300 1.32e-174 484
MS.gene47475.t1 AT5G46800 79.667 300 58 1 1 297 1 300 1.32e-174 484
MS.gene47475.t1 AT2G33820 34.314 306 173 8 6 297 16 307 1.15e-49 167
MS.gene47475.t1 AT2G33820 33.439 314 173 9 6 297 16 315 7.59e-47 160
MS.gene47475.t1 AT1G79900 34.520 281 151 7 22 296 30 283 5.08e-42 147
MS.gene47475.t1 AT2G33820 31.890 254 144 8 6 243 16 256 2.22e-33 123
MS.gene47475.t1 AT2G33820 36.458 192 105 5 115 297 43 226 4.61e-33 121
MS.gene47475.t1 AT5G48970 28.615 325 186 9 7 296 21 334 2.06e-31 120
MS.gene47475.t1 AT4G01100 30.218 321 186 8 3 297 37 345 7.82e-31 119
MS.gene47475.t1 AT4G01100 30.333 300 171 8 24 297 8 295 2.02e-29 114
MS.gene47475.t1 AT4G01100 29.254 335 185 8 3 297 37 359 1.11e-28 113
MS.gene47475.t1 AT1G25380 31.752 274 172 8 24 291 37 301 8.04e-28 110
MS.gene47475.t1 AT1G25380 31.752 274 172 8 24 291 37 301 8.04e-28 110
MS.gene47475.t1 AT3G21390 27.673 318 187 7 7 291 18 325 9.97e-27 107
MS.gene47475.t1 AT3G21390 25.366 205 132 4 10 199 132 330 1.09e-11 65.1
MS.gene47475.t1 AT3G21390 27.673 318 187 7 7 291 40 347 1.31e-26 107
MS.gene47475.t1 AT3G21390 25.366 205 132 4 10 199 154 352 1.21e-11 65.1
MS.gene47475.t1 AT2G47490 30.686 277 179 7 24 296 33 300 2.08e-25 103
MS.gene47475.t1 AT2G47490 33.149 181 108 8 121 297 30 201 1.34e-11 64.7
MS.gene47475.t1 AT5G48970 29.151 271 155 8 52 296 4 263 3.84e-25 101
MS.gene47475.t1 AT5G48970 26.500 200 127 4 8 193 64 257 2.33e-15 74.7
MS.gene47475.t1 AT3G54110 30.961 281 166 10 24 293 31 294 2.70e-23 97.4
MS.gene47475.t1 AT3G54110 31.156 199 123 3 1 197 109 295 2.48e-21 92.0
MS.gene47475.t1 AT3G54110 30.693 202 131 4 100 296 7 204 8.51e-19 85.1
MS.gene47475.t1 AT1G14140 26.812 276 192 6 21 293 29 297 1.50e-21 92.8
MS.gene47475.t1 AT1G14140 28.125 192 126 5 6 196 117 297 2.27e-13 69.7
MS.gene47475.t1 AT5G66380 26.667 300 192 9 6 290 8 294 1.83e-21 92.4
MS.gene47475.t1 AT5G66380 29.500 200 122 7 5 195 107 296 2.26e-17 81.3
MS.gene47475.t1 AT2G37890 27.575 301 197 5 6 296 43 332 7.34e-21 91.3
MS.gene47475.t1 AT2G37890 27.041 196 132 4 2 197 146 330 1.06e-12 67.8
MS.gene47475.t1 AT4G11440 27.797 295 184 9 10 297 332 604 8.97e-21 92.8
MS.gene47475.t1 AT4G11440 27.797 295 184 9 10 297 332 604 8.97e-21 92.8
MS.gene47475.t1 AT5G01340 28.521 284 183 8 10 286 19 289 2.51e-20 89.4
MS.gene47475.t1 AT5G01340 30.000 180 116 4 19 195 123 295 8.75e-14 70.9
MS.gene47475.t1 AT5G58970 30.466 279 176 7 24 296 32 298 5.19e-20 88.6
MS.gene47475.t1 AT5G58970 28.856 201 128 3 1 199 111 298 4.97e-19 85.9
MS.gene47475.t1 AT5G58970 28.780 205 138 4 97 296 5 206 1.53e-17 81.6
MS.gene47475.t1 AT5G42130 29.242 277 169 5 24 293 134 390 2.58e-19 87.8
MS.gene47475.t1 AT1G74240 28.797 316 187 11 4 294 32 334 3.48e-19 87.0
MS.gene47475.t1 AT1G14560 26.298 289 186 8 24 296 43 320 4.91e-19 86.3
MS.gene47475.t1 AT4G32400 26.531 294 193 7 6 296 112 385 8.67e-19 86.3
MS.gene47475.t1 AT1G74240 29.293 297 172 11 23 294 3 286 1.03e-18 85.1
MS.gene47475.t1 AT3G55640 30.570 193 123 4 7 199 144 325 3.40e-18 84.0
MS.gene47475.t1 AT3G55640 25.166 302 197 7 3 290 33 319 5.37e-17 80.5
MS.gene47475.t1 AT3G55640 30.348 201 128 5 100 294 30 224 3.90e-15 75.1
MS.gene47475.t1 AT3G55640 30.570 193 123 4 7 199 144 325 3.40e-18 84.0
MS.gene47475.t1 AT3G55640 25.166 302 197 7 3 290 33 319 5.37e-17 80.5
MS.gene47475.t1 AT3G55640 30.348 201 128 5 100 294 30 224 3.90e-15 75.1
MS.gene47475.t1 AT5G51050 28.082 292 184 9 10 296 225 495 3.81e-18 84.7
MS.gene47475.t1 AT5G51050 26.768 198 119 5 8 199 318 495 8.00e-12 65.9
MS.gene47475.t1 AT2G30160 27.362 307 174 11 8 294 42 319 6.95e-18 82.8
MS.gene47475.t1 AT5G58970 28.922 204 137 4 98 296 6 206 9.53e-18 81.6
MS.gene47475.t1 AT1G07030 27.946 297 182 10 8 294 40 314 2.03e-17 81.6
MS.gene47475.t1 AT5G56450 24.679 312 198 11 6 297 32 326 2.67e-17 81.3
MS.gene47475.t1 AT5G61810 26.936 297 186 8 5 296 62 332 1.27e-16 79.3
MS.gene47475.t1 AT5G61810 26.500 200 118 6 8 200 156 333 1.79e-12 67.4
MS.gene47475.t1 AT3G53940 25.249 301 204 5 6 296 71 360 1.38e-16 79.3
MS.gene47475.t1 AT4G26180 26.645 304 199 10 5 296 18 309 1.69e-16 79.0
MS.gene47475.t1 AT5G61810 26.936 297 186 8 5 296 205 475 7.40e-16 77.8
MS.gene47475.t1 AT5G61810 26.500 200 118 6 8 200 299 476 3.02e-12 67.0
MS.gene47475.t1 AT1G14560 26.136 264 168 8 24 271 43 295 8.27e-16 76.6
MS.gene47475.t1 AT3G55640 30.348 201 128 6 100 294 30 224 1.46e-15 75.1
MS.gene47475.t1 AT3G55640 30.348 201 128 6 100 294 30 224 1.46e-15 75.1
MS.gene47475.t1 AT4G39460 28.470 281 150 10 3 273 49 288 4.51e-15 74.7
MS.gene47475.t1 AT4G39460 30.319 188 101 4 103 290 53 210 3.59e-13 69.3
MS.gene47475.t1 AT4G39460 30.052 193 116 4 8 200 139 312 7.94e-13 68.2
MS.gene47475.t1 AT4G39460 28.470 281 150 10 3 273 49 288 4.51e-15 74.7
MS.gene47475.t1 AT4G39460 30.319 188 101 4 103 290 53 210 3.59e-13 69.3
MS.gene47475.t1 AT4G39460 30.052 193 116 4 8 200 139 312 7.94e-13 68.2
MS.gene47475.t1 AT4G39460 28.470 281 150 10 3 273 49 288 4.51e-15 74.7
MS.gene47475.t1 AT4G39460 30.319 188 101 4 103 290 53 210 3.59e-13 69.3
MS.gene47475.t1 AT4G39460 30.052 193 116 4 8 200 139 312 7.94e-13 68.2
MS.gene47475.t1 AT1G34065 33.684 190 107 5 8 197 156 326 5.59e-15 74.7
MS.gene47475.t1 AT1G34065 28.571 224 120 6 78 293 39 230 3.57e-13 69.3
MS.gene47475.t1 AT1G34065 27.407 270 144 11 14 273 78 305 1.07e-11 65.1
MS.gene47475.t1 AT1G34065 33.684 190 107 5 8 197 163 333 6.51e-15 74.3
MS.gene47475.t1 AT1G34065 28.571 224 120 6 78 293 46 237 3.82e-13 69.3
MS.gene47475.t1 AT1G34065 27.407 270 144 11 14 273 85 312 1.16e-11 65.1
MS.gene47475.t1 AT2G39970 25.987 304 184 11 20 290 20 315 7.64e-15 74.3
MS.gene47475.t1 AT5G01500 26.619 278 183 7 21 297 132 389 9.02e-15 74.3
MS.gene47475.t1 AT3G20240 22.642 318 193 8 5 296 49 339 9.27e-15 73.9
MS.gene47475.t1 AT1G14560 28.218 202 128 4 108 296 25 222 2.54e-14 71.2
MS.gene47475.t1 AT4G26180 26.882 279 180 10 5 271 18 284 5.28e-14 71.2
MS.gene47475.t1 AT5G07320 24.460 278 181 8 24 297 225 477 3.51e-13 70.1
MS.gene47475.t1 AT5G07320 24.623 199 123 5 8 200 300 477 1.92e-11 64.7
MS.gene47475.t1 AT3G51870 24.820 278 188 7 21 297 104 361 5.22e-13 69.3
MS.gene47475.t1 AT2G22500 28.723 188 110 8 21 199 136 308 8.85e-13 68.2
MS.gene47475.t1 AT2G22500 25.484 310 188 11 14 293 9 305 6.87e-12 65.5
MS.gene47475.t1 AT5G15640 24.653 288 186 10 23 293 43 316 1.50e-12 67.4
MS.gene47475.t1 AT5G64970 26.568 271 158 9 50 296 45 298 1.67e-12 67.0
MS.gene47475.t1 AT5G15640 24.653 288 186 10 23 293 36 309 1.75e-12 67.0
MS.gene47475.t1 AT5G64970 26.568 271 158 9 50 296 169 422 3.55e-12 66.6
MS.gene47475.t1 AT1G72820 29.949 197 114 5 108 293 31 214 4.09e-12 66.2
MS.gene47475.t1 AT1G72820 29.949 197 114 5 108 293 31 214 4.09e-12 66.2
MS.gene47475.t1 AT5G13490 26.298 289 189 9 3 279 83 359 4.87e-12 66.2
MS.gene47475.t1 AT5G13490 26.298 289 189 9 3 279 83 359 4.87e-12 66.2
MS.gene47475.t1 AT4G24570 25.723 311 194 9 14 296 9 310 1.82e-11 64.3
MS.gene47475.t1 AT3G53940 32.653 147 85 4 157 294 118 259 3.79e-11 63.2
MS.gene47475.t1 AT5G09470 23.511 319 192 6 23 296 21 332 8.36e-11 62.4
MS.gene47475.t1 AT4G03115 27.368 190 112 6 114 296 41 211 8.37e-11 61.2
MS.gene47475.t1 AT4G03115 27.368 190 112 6 114 296 41 211 8.43e-11 61.2

Find 113 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGGCCGGTGCTTCTTTC+TGG -0.061490 8.4:+35385699 MS.gene47475:CDS
CTTGGCCGGTGCTTCTTTCT+GGG 0.241979 8.4:+35385700 MS.gene47475:CDS
GGTCAGCCTCCCAGGTATTC+TGG 0.246669 8.4:+35384408 MS.gene47475:CDS
TGCAAATGCAGCATGCTTCT+TGG 0.250480 8.4:+35385886 MS.gene47475:CDS
TATAAGAACCCTAAGTATTC+TGG 0.276831 8.4:+35385773 MS.gene47475:CDS
ATGCTGTCCTGTTTACAGTT+AGG 0.302096 8.4:+35384526 MS.gene47475:CDS
AAAGGCCTATACAAGGGTTT+TGG 0.323072 8.4:+35385839 MS.gene47475:CDS
GCAGCTGTGGCTGTTAAATA+TGG 0.323087 8.4:+35385476 MS.gene47475:CDS
CAACAGTTTGTTTGTGGAGC+TGG 0.331068 8.4:+35384603 MS.gene47475:CDS
CCAAACATTATCGCGTTTCC+AGG 0.344503 8.4:-35385593 None:intergenic
GCTTTGGAGCTTGACCTTGA+TGG 0.347593 8.4:-35384367 None:intergenic
AAGAAGCATGCTGCATTTGC+AGG 0.353862 8.4:-35385884 None:intergenic
TGCTGTCCTGTTTACAGTTA+GGG 0.360522 8.4:+35384527 MS.gene47475:CDS
CAAGCACAAAGTGCGCTTGC+TGG 0.375899 8.4:+35385443 MS.gene47475:CDS
GTATAAACCCCTTGGACCTT+CGG 0.379175 8.4:-35384463 None:intergenic
CAAGGTTCTCTGATTGTTGC+TGG 0.380140 8.4:+35385674 MS.gene47475:CDS
GGAGTGGTGTAGGTTGGCTT+TGG 0.381162 8.4:-35384383 None:intergenic
GTGAATCAACAGTTTGTTTG+TGG 0.384671 8.4:+35384597 MS.gene47475:CDS
CACTCCCTGGTCAGCCTCCC+AGG 0.390074 8.4:+35384400 MS.gene47475:CDS
CAAAGTGCGCTTGCTGGCAC+TGG 0.391167 8.4:+35385449 MS.gene47475:CDS
CTCCAACGGTACCGGCTGTT+AGG 0.393589 8.4:-35384308 None:intergenic
GGCTGACCAGGGAGTGGTGT+AGG 0.403164 8.4:-35384393 None:intergenic
CCTGGAAACGCGATAATGTT+TGG 0.416228 8.4:+35385593 MS.gene47475:CDS
GCAATAAAACAACAGTTTGC+AGG 0.420000 8.4:+35385626 MS.gene47475:CDS
ATTGTTGCTGGAGGCTTGGC+CGG 0.422785 8.4:+35385686 MS.gene47475:CDS
GGAACACTTCTGCCCATTGC+AGG 0.423868 8.4:-35385863 None:intergenic
TCTGATTGTTGCTGGAGGCT+TGG 0.427870 8.4:+35385682 MS.gene47475:CDS
GTTTACAGTTAGGGGACAAA+TGG 0.441339 8.4:+35384536 MS.gene47475:CDS
TCAAATGAACCAGAATACTT+AGG 0.441953 8.4:-35385782 None:intergenic
ATCAAATGCACCAGAATACC+TGG 0.442262 8.4:-35384418 None:intergenic
TTCAGTTGGACAAGCAAGAA+AGG 0.442283 8.4:-35384643 None:intergenic
GAATACCTGGGAGGCTGACC+AGG 0.446488 8.4:-35384405 None:intergenic
GAGATGACAAGATCAGCTTT+AGG 0.446594 8.4:+35385914 MS.gene47475:CDS
TTTGTTTGTGGAGCTGGAGC+TGG 0.446739 8.4:+35384609 MS.gene47475:CDS
CCTCTGATCGGAGAACTTGT+CGG 0.450931 8.4:-35385517 None:intergenic
AAAGGCTTGCTTCCCACAAT+GGG 0.455299 8.4:+35385560 MS.gene47475:CDS
CTCTGATCGGAGAACTTGTC+GGG 0.461891 8.4:-35385516 None:intergenic
CGCAGCCCCTCCAACGGTAC+CGG 0.466143 8.4:-35384316 None:intergenic
CAAATGAACCAGAATACTTA+GGG 0.470391 8.4:-35385781 None:intergenic
TTTGTCCCCTAACTGTAAAC+AGG 0.473371 8.4:-35384533 None:intergenic
CAGGACCAAAACCCTTGTAT+AGG 0.476463 8.4:-35385844 None:intergenic
AAGGGGTTTATACAAAGGTA+TGG 0.477080 8.4:+35384473 MS.gene47475:CDS
CTGGTGCATTTGATGCCGTC+AGG 0.479987 8.4:+35384427 MS.gene47475:CDS
TGTAAACAGGACAGCATTGA+AGG 0.482656 8.4:-35384520 None:intergenic
CTGCATTTGATTAATTCAGT+TGG 0.482770 8.4:-35384657 None:intergenic
CTTGACCTTGATGGTGTCAA+AGG 0.491589 8.4:-35384358 None:intergenic
CAAAGGCTTGCTTCCCACAA+TGG 0.495130 8.4:+35385559 MS.gene47475:CDS
GCAGGCGGCACCGATACCTC+TGG 0.499521 8.4:+35385644 MS.gene47475:CDS
TTGGCTTAGGCCAGAGGTAT+CGG 0.500077 8.4:-35385654 None:intergenic
GGTATCTCACGTCCCATTGT+GGG 0.504002 8.4:-35385572 None:intergenic
CGTTAGCGGCCGAAGGTCCA+AGG 0.505132 8.4:+35384454 MS.gene47475:CDS
GACCTAACAGCCGGTACCGT+TGG 0.510987 8.4:+35384306 MS.gene47475:CDS
GACCAGGGAGTGGTGTAGGT+TGG 0.511203 8.4:-35384389 None:intergenic
ATACCTTTGTATAAACCCCT+TGG 0.513759 8.4:-35384471 None:intergenic
TGGCACTGGAACAGCAGCTG+TGG 0.515388 8.4:+35385463 MS.gene47475:CDS
AGGCTGCAACCGTAGCAAGC+GGG 0.515933 8.4:-35384500 None:intergenic
TGCCGTCAGGCAGACGTTAG+CGG 0.518635 8.4:+35384440 MS.gene47475:CDS
TTGGCCGGTGCTTCTTTCTG+GGG 0.522148 8.4:+35385701 MS.gene47475:CDS
GGCTGCAACCGTAGCAAGCG+GGG 0.523372 8.4:-35384499 None:intergenic
TATGGGCGCCCCGCTTGCTA+CGG 0.523381 8.4:+35384491 MS.gene47475:CDS
ACTTGTCGGGCCACATCCAT+TGG 0.524980 8.4:-35385503 None:intergenic
CTAACAGCCGGTACCGTTGG+AGG 0.527372 8.4:+35384309 MS.gene47475:CDS
GGGGCTGCGCAATTGATAGT+TGG 0.530364 8.4:+35384330 MS.gene47475:CDS
CAATCAGAGAACCTTGGCTT+AGG 0.532063 8.4:-35385667 None:intergenic
CGACAAGTTCTCCGATCAGA+GGG 0.540590 8.4:+35385518 MS.gene47475:CDS
TAACAGCCGGTACCGTTGGA+GGG 0.542283 8.4:+35384310 MS.gene47475:CDS
AACAGCCGGTACCGTTGGAG+GGG 0.550048 8.4:+35384311 MS.gene47475:CDS
AGAAAGATTAAAGCCACTGA+GGG 0.552045 8.4:+35385812 MS.gene47475:CDS
AGGTATCTCACGTCCCATTG+TGG 0.554970 8.4:-35385573 None:intergenic
CAACTGAATTAATCAAATGC+AGG 0.556324 8.4:+35384658 MS.gene47475:CDS
CTGGGAGGCTGACCAGGGAG+TGG 0.557597 8.4:-35384399 None:intergenic
GATGCCCCAGAAAGAAGCAC+CGG 0.559324 8.4:-35385705 None:intergenic
GGGATTCAAAGGCCTATACA+AGG 0.561547 8.4:+35385832 MS.gene47475:CDS
GGTTCTCTGATTGTTGCTGG+AGG 0.565281 8.4:+35385677 MS.gene47475:CDS
TTCACTGTGAGGTGAGCACC+AGG 0.566575 8.4:-35384579 None:intergenic
ACAATGGGACGTGAGATACC+TGG 0.567569 8.4:+35385575 MS.gene47475:CDS
GGCCGCTAACGTCTGCCTGA+CGG 0.568359 8.4:-35384442 None:intergenic
ACATCCCTTTGACACCATCA+AGG 0.573529 8.4:+35384353 MS.gene47475:CDS
ATAGATGGGAGACGTGGCTA+AGG 0.574654 8.4:+35384284 None:intergenic
GTTAGCGGCCGAAGGTCCAA+GGG 0.574705 8.4:+35384455 MS.gene47475:CDS
CCGACAAGTTCTCCGATCAG+AGG 0.577088 8.4:+35385517 MS.gene47475:CDS
CTGTGAGGTGAGCACCAGGA+TGG 0.578425 8.4:-35384575 None:intergenic
AAAGCCACTGAGGGATTCAA+AGG 0.580482 8.4:+35385821 MS.gene47475:CDS
AGCCAACCTACACCACTCCC+TGG 0.582219 8.4:+35384387 MS.gene47475:CDS
TCATTAGTGAGGTCCCATCC+TGG 0.583140 8.4:+35384561 MS.gene47475:CDS
CAGCAACAATCAGAGAACCT+TGG 0.584834 8.4:-35385673 None:intergenic
AGGCAGACGTTAGCGGCCGA+AGG 0.586497 8.4:+35384447 MS.gene47475:CDS
AGGGGTTTATACAAAGGTAT+GGG 0.586855 8.4:+35384474 MS.gene47475:CDS
AAGGCTGCAACCGTAGCAAG+CGG 0.590188 8.4:-35384501 None:intergenic
ACAAGTTCTCCGATCAGAGG+GGG 0.595172 8.4:+35385520 MS.gene47475:CDS
ATATGGAGGACCAATGGATG+TGG 0.607442 8.4:+35385493 MS.gene47475:CDS
GATACCTCTGGCCTAAGCCA+AGG 0.607559 8.4:+35385656 MS.gene47475:CDS
TTGACCTTGATGGTGTCAAA+GGG 0.607728 8.4:-35384357 None:intergenic
AGAACCTTGGCTTAGGCCAG+AGG 0.608842 8.4:-35385660 None:intergenic
TGTGAGGTGAGCACCAGGAT+GGG 0.609525 8.4:-35384574 None:intergenic
GCTGTCCTGTTTACAGTTAG+GGG 0.610080 8.4:+35384528 MS.gene47475:CDS
CAATTGCGCAGCCCCTCCAA+CGG 0.617240 8.4:-35384322 None:intergenic
GACAAGTTCTCCGATCAGAG+GGG 0.621299 8.4:+35385519 MS.gene47475:CDS
GGTCCAAGGGGTTTATACAA+AGG 0.624894 8.4:+35384468 MS.gene47475:CDS
GTGGCTAAGGACCTAACAGC+CGG 0.639723 8.4:+35384297 MS.gene47475:CDS
GCTGTGGCTGTTAAATATGG+AGG 0.641249 8.4:+35385479 MS.gene47475:CDS
CAGAAAGATTAAAGCCACTG+AGG 0.646297 8.4:+35385811 MS.gene47475:CDS
TAGGCCTTTGAATCCCTCAG+TGG 0.646577 8.4:-35385825 None:intergenic
AATACCTGGGAGGCTGACCA+GGG 0.652600 8.4:-35384404 None:intergenic
CAAGTTCTCCGATCAGAGGG+GGG 0.661799 8.4:+35385521 MS.gene47475:CDS
TGTTAAATATGGAGGACCAA+TGG 0.664961 8.4:+35385487 MS.gene47475:CDS
GACAAATGGAATCATTAGTG+AGG 0.669383 8.4:+35384550 MS.gene47475:CDS
GGATTCAAAGGCCTATACAA+GGG 0.670176 8.4:+35385833 MS.gene47475:CDS
TCAAATGCACCAGAATACCT+GGG 0.678659 8.4:-35384417 None:intergenic
ATAAAACAACAGTTTGCAGG+CGG 0.699836 8.4:+35385629 MS.gene47475:CDS
TTAGCGGCCGAAGGTCCAAG+GGG 0.724026 8.4:+35384456 MS.gene47475:CDS
CAAACTGTTGATTCACTGTG+AGG 0.745264 8.4:-35384590 None:intergenic
AATGCACCAGAATACCTGGG+AGG 0.779847 8.4:-35384414 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAATGAAAATTTAATAA+AGG - chr8.4:35384759-35384778 None:intergenic 10.0%
!! ATCAATGAAAATTTAATAAA+GGG - chr8.4:35384758-35384777 None:intergenic 10.0%
!! TCAAAATTAAAATAAAAAAG+TGG - chr8.4:35385030-35385049 None:intergenic 10.0%
!!! TTTCATATATTATTTAAAAC+AGG + chr8.4:35385345-35385364 MS.gene47475:intron 10.0%
!! GTTTCATTATGAATATCATT+AGG + chr8.4:35385417-35385436 MS.gene47475:intron 20.0%
!! TACAAATTGATTGAAAGAAA+AGG - chr8.4:35384708-35384727 None:intergenic 20.0%
!!! AAATCTTGATTTTATAACCA+TGG + chr8.4:35385257-35385276 MS.gene47475:intron 20.0%
! AAAATACGCCTCATATTTAT+CGG - chr8.4:35384894-35384913 None:intergenic 25.0%
! AAATACATGTGCAAAATAGA+TGG - chr8.4:35384962-35384981 None:intergenic 25.0%
! AAGTTTAGGTAAGATTCATT+AGG - chr8.4:35384996-35385015 None:intergenic 25.0%
! AGTTTAGGTAAGATTCATTA+GGG - chr8.4:35384995-35385014 None:intergenic 25.0%
! TCAAGATTTATGTTGTGAAT+TGG - chr8.4:35385246-35385265 None:intergenic 25.0%
!! TCGACTTTGTACTTAATTTT+TGG + chr8.4:35385395-35385414 MS.gene47475:intron 25.0%
!!! TCATTGATTTTGATCTCTTT+AGG + chr8.4:35384770-35384789 MS.gene47475:intron 25.0%
AAACCAGATTGTCATAAGAT+TGG + chr8.4:35384855-35384874 MS.gene47475:intron 30.0%
AGTATCTTCCGATAAATATG+AGG + chr8.4:35384883-35384902 MS.gene47475:intron 30.0%
CAAATGAACCAGAATACTTA+GGG - chr8.4:35385784-35385803 None:intergenic 30.0%
CAACTGAATTAATCAAATGC+AGG + chr8.4:35384658-35384677 MS.gene47475:CDS 30.0%
CTGCATTTGATTAATTCAGT+TGG - chr8.4:35384660-35384679 None:intergenic 30.0%
TAACCAATCTTATGACAATC+TGG - chr8.4:35384861-35384880 None:intergenic 30.0%
TATAAGAACCCTAAGTATTC+TGG + chr8.4:35385773-35385792 MS.gene47475:CDS 30.0%
TCAAATGAACCAGAATACTT+AGG - chr8.4:35385785-35385804 None:intergenic 30.0%
TGAATTAATCAAATGCAGGT+AGG + chr8.4:35384662-35384681 MS.gene47475:intron 30.0%
! AAGCACACTTTTAACAACAT+CGG - chr8.4:35385741-35385760 None:intergenic 30.0%
!! ACTAAGGATTTGTATCGATT+GGG - chr8.4:35384937-35384956 None:intergenic 30.0%
AAGGGGTTTATACAAAGGTA+TGG + chr8.4:35384473-35384492 MS.gene47475:CDS 35.0%
AATCTGCTGCTGAATTCATT+CGG - chr8.4:35385296-35385315 None:intergenic 35.0%
AGAAAGATTAAAGCCACTGA+GGG + chr8.4:35385812-35385831 MS.gene47475:CDS 35.0%
ATAAAACAACAGTTTGCAGG+CGG + chr8.4:35385629-35385648 MS.gene47475:CDS 35.0%
ATACCTTTGTATAAACCCCT+TGG - chr8.4:35384474-35384493 None:intergenic 35.0%
GACAAATGGAATCATTAGTG+AGG + chr8.4:35384550-35384569 MS.gene47475:CDS 35.0%
GCAATAAAACAACAGTTTGC+AGG + chr8.4:35385626-35385645 MS.gene47475:CDS 35.0%
TCGGTTTATTCTTATGACCA+TGG - chr8.4:35385277-35385296 None:intergenic 35.0%
TGCAAAATAGATGGACACTA+AGG - chr8.4:35384953-35384972 None:intergenic 35.0%
TGGTTTATGTCAACTATGAG+AGG - chr8.4:35384841-35384860 None:intergenic 35.0%
TGTTAAATATGGAGGACCAA+TGG + chr8.4:35385487-35385506 MS.gene47475:CDS 35.0%
TTATGTCAACTATGAGAGGA+TGG - chr8.4:35384837-35384856 None:intergenic 35.0%
! ACACTTTTAACAACATCGGT+TGG - chr8.4:35385737-35385756 None:intergenic 35.0%
! AGGGGTTTATACAAAGGTAT+GGG + chr8.4:35384474-35384493 MS.gene47475:CDS 35.0%
! CACTAAGGATTTGTATCGAT+TGG - chr8.4:35384938-35384957 None:intergenic 35.0%
! GTGAATCAACAGTTTGTTTG+TGG + chr8.4:35384597-35384616 MS.gene47475:CDS 35.0%
!! CACTTTTAACAACATCGGTT+GGG - chr8.4:35385736-35385755 None:intergenic 35.0%
!! CTAAGGATTTGTATCGATTG+GGG - chr8.4:35384936-35384955 None:intergenic 35.0%
ATCAAATGCACCAGAATACC+TGG - chr8.4:35384421-35384440 None:intergenic 40.0%
ATGCTGTCCTGTTTACAGTT+AGG + chr8.4:35384526-35384545 MS.gene47475:CDS 40.0%
CAGAAAGATTAAAGCCACTG+AGG + chr8.4:35385811-35385830 MS.gene47475:CDS 40.0%
GAGATGACAAGATCAGCTTT+AGG + chr8.4:35385914-35385933 MS.gene47475:CDS 40.0%
GGATTCAAAGGCCTATACAA+GGG + chr8.4:35385833-35385852 MS.gene47475:CDS 40.0%
GTTTACAGTTAGGGGACAAA+TGG + chr8.4:35384536-35384555 MS.gene47475:CDS 40.0%
TCAAATGCACCAGAATACCT+GGG - chr8.4:35384420-35384439 None:intergenic 40.0%
TGCTGTCCTGTTTACAGTTA+GGG + chr8.4:35384527-35384546 MS.gene47475:CDS 40.0%
TGGACGAGTACACTAAGTTT+AGG - chr8.4:35385010-35385029 None:intergenic 40.0%
TTCAGTTGGACAAGCAAGAA+AGG - chr8.4:35384646-35384665 None:intergenic 40.0%
TTTGTCCCCTAACTGTAAAC+AGG - chr8.4:35384536-35384555 None:intergenic 40.0%
! AAAGGCCTATACAAGGGTTT+TGG + chr8.4:35385839-35385858 MS.gene47475:CDS 40.0%
! TGTAAACAGGACAGCATTGA+AGG - chr8.4:35384523-35384542 None:intergenic 40.0%
!! CAAACTGTTGATTCACTGTG+AGG - chr8.4:35384593-35384612 None:intergenic 40.0%
!! TTGACCTTGATGGTGTCAAA+GGG - chr8.4:35384360-35384379 None:intergenic 40.0%
AAAGCCACTGAGGGATTCAA+AGG + chr8.4:35385821-35385840 MS.gene47475:CDS 45.0%
ACATCCCTTTGACACCATCA+AGG + chr8.4:35384353-35384372 MS.gene47475:CDS 45.0%
ATATGGAGGACCAATGGATG+TGG + chr8.4:35385493-35385512 MS.gene47475:CDS 45.0%
CAAGGTTCTCTGATTGTTGC+TGG + chr8.4:35385674-35385693 MS.gene47475:CDS 45.0%
CAATCAGAGAACCTTGGCTT+AGG - chr8.4:35385670-35385689 None:intergenic 45.0%
CAGCAACAATCAGAGAACCT+TGG - chr8.4:35385676-35385695 None:intergenic 45.0%
CAGGACCAAAACCCTTGTAT+AGG - chr8.4:35385847-35385866 None:intergenic 45.0%
CCAAACATTATCGCGTTTCC+AGG - chr8.4:35385596-35385615 None:intergenic 45.0%
CCTGGAAACGCGATAATGTT+TGG + chr8.4:35385593-35385612 MS.gene47475:CDS 45.0%
GCAGCTGTGGCTGTTAAATA+TGG + chr8.4:35385476-35385495 MS.gene47475:CDS 45.0%
GCTGTCCTGTTTACAGTTAG+GGG + chr8.4:35384528-35384547 MS.gene47475:CDS 45.0%
GCTGTGGCTGTTAAATATGG+AGG + chr8.4:35385479-35385498 MS.gene47475:CDS 45.0%
GGGATTCAAAGGCCTATACA+AGG + chr8.4:35385832-35385851 MS.gene47475:CDS 45.0%
GGTCCAAGGGGTTTATACAA+AGG + chr8.4:35384468-35384487 MS.gene47475:CDS 45.0%
GTATAAACCCCTTGGACCTT+CGG - chr8.4:35384466-35384485 None:intergenic 45.0%
TGCAAATGCAGCATGCTTCT+TGG + chr8.4:35385886-35385905 MS.gene47475:CDS 45.0%
! AAAGGCTTGCTTCCCACAAT+GGG + chr8.4:35385560-35385579 MS.gene47475:CDS 45.0%
! AAGAAGCATGCTGCATTTGC+AGG - chr8.4:35385887-35385906 None:intergenic 45.0%
! CAACAGTTTGTTTGTGGAGC+TGG + chr8.4:35384603-35384622 MS.gene47475:CDS 45.0%
!! AAGGGTTTTGGTCCTGCAAT+GGG + chr8.4:35385851-35385870 MS.gene47475:CDS 45.0%
!! CTTGACCTTGATGGTGTCAA+AGG - chr8.4:35384361-35384380 None:intergenic 45.0%
AATGCACCAGAATACCTGGG+AGG - chr8.4:35384417-35384436 None:intergenic 50.0%
ACAAGTTCTCCGATCAGAGG+GGG + chr8.4:35385520-35385539 MS.gene47475:CDS 50.0%
ACAATGGGACGTGAGATACC+TGG + chr8.4:35385575-35385594 MS.gene47475:CDS 50.0%
AGGTATCTCACGTCCCATTG+TGG - chr8.4:35385576-35385595 None:intergenic 50.0%
CCTCTGATCGGAGAACTTGT+CGG - chr8.4:35385520-35385539 None:intergenic 50.0%
CGACAAGTTCTCCGATCAGA+GGG + chr8.4:35385518-35385537 MS.gene47475:CDS 50.0%
CTCTGATCGGAGAACTTGTC+GGG - chr8.4:35385519-35385538 None:intergenic 50.0%
GACAAGTTCTCCGATCAGAG+GGG + chr8.4:35385519-35385538 MS.gene47475:CDS 50.0%
GGTATCTCACGTCCCATTGT+GGG - chr8.4:35385575-35385594 None:intergenic 50.0%
GGTTCTCTGATTGTTGCTGG+AGG + chr8.4:35385677-35385696 MS.gene47475:CDS 50.0%
TAGGCCTTTGAATCCCTCAG+TGG - chr8.4:35385828-35385847 None:intergenic 50.0%
TCATTAGTGAGGTCCCATCC+TGG + chr8.4:35384561-35384580 MS.gene47475:CDS 50.0%
TCTGATTGTTGCTGGAGGCT+TGG + chr8.4:35385682-35385701 MS.gene47475:CDS 50.0%
TTTGTTTGTGGAGCTGGAGC+TGG + chr8.4:35384609-35384628 MS.gene47475:CDS 50.0%
! CAAAGGCTTGCTTCCCACAA+TGG + chr8.4:35385559-35385578 MS.gene47475:CDS 50.0%
! GGCGTGAGAGGTCTTTTCAA+AGG + chr8.4:35385542-35385561 MS.gene47475:CDS 50.0%
! TTGGCTTAGGCCAGAGGTAT+CGG - chr8.4:35385657-35385676 None:intergenic 50.0%
!! CAAGGGTTTTGGTCCTGCAA+TGG + chr8.4:35385850-35385869 MS.gene47475:CDS 50.0%
!! GCTTTGGAGCTTGACCTTGA+TGG - chr8.4:35384370-35384389 None:intergenic 50.0%
AAGGCTGCAACCGTAGCAAG+CGG - chr8.4:35384504-35384523 None:intergenic 55.0%
AATACCTGGGAGGCTGACCA+GGG - chr8.4:35384407-35384426 None:intergenic 55.0%
ACTTGTCGGGCCACATCCAT+TGG - chr8.4:35385506-35385525 None:intergenic 55.0%
AGAACCTTGGCTTAGGCCAG+AGG - chr8.4:35385663-35385682 None:intergenic 55.0%
ATTGTTGCTGGAGGCTTGGC+CGG + chr8.4:35385686-35385705 MS.gene47475:CDS 55.0%
CAAGCACAAAGTGCGCTTGC+TGG + chr8.4:35385443-35385462 MS.gene47475:CDS 55.0%
CAAGTTCTCCGATCAGAGGG+GGG + chr8.4:35385521-35385540 MS.gene47475:CDS 55.0%
CCGACAAGTTCTCCGATCAG+AGG + chr8.4:35385517-35385536 MS.gene47475:CDS 55.0%
CTGGTGCATTTGATGCCGTC+AGG + chr8.4:35384427-35384446 MS.gene47475:CDS 55.0%
CTTGGCCGGTGCTTCTTTCT+GGG + chr8.4:35385700-35385719 MS.gene47475:CDS 55.0%
GATACCTCTGGCCTAAGCCA+AGG + chr8.4:35385656-35385675 MS.gene47475:CDS 55.0%
GGAACACTTCTGCCCATTGC+AGG - chr8.4:35385866-35385885 None:intergenic 55.0%
GTGGCTAAGGACCTAACAGC+CGG + chr8.4:35384297-35384316 MS.gene47475:CDS 55.0%
TAACAGCCGGTACCGTTGGA+GGG + chr8.4:35384310-35384329 MS.gene47475:CDS 55.0%
TGTGAGGTGAGCACCAGGAT+GGG - chr8.4:35384577-35384596 None:intergenic 55.0%
TTCACTGTGAGGTGAGCACC+AGG - chr8.4:35384582-35384601 None:intergenic 55.0%
TTGGCCGGTGCTTCTTTCTG+GGG + chr8.4:35385701-35385720 MS.gene47475:CDS 55.0%
! GATGCCCCAGAAAGAAGCAC+CGG - chr8.4:35385708-35385727 None:intergenic 55.0%
! GGGGCTGCGCAATTGATAGT+TGG + chr8.4:35384330-35384349 MS.gene47475:CDS 55.0%
!! GGAGTGGTGTAGGTTGGCTT+TGG - chr8.4:35384386-35384405 None:intergenic 55.0%
AACAGCCGGTACCGTTGGAG+GGG + chr8.4:35384311-35384330 MS.gene47475:CDS 60.0%
AGCCAACCTACACCACTCCC+TGG + chr8.4:35384387-35384406 MS.gene47475:CDS 60.0%
AGGCTGCAACCGTAGCAAGC+GGG - chr8.4:35384503-35384522 None:intergenic 60.0%
CAATTGCGCAGCCCCTCCAA+CGG - chr8.4:35384325-35384344 None:intergenic 60.0%
CTAACAGCCGGTACCGTTGG+AGG + chr8.4:35384309-35384328 MS.gene47475:CDS 60.0%
CTGTGAGGTGAGCACCAGGA+TGG - chr8.4:35384578-35384597 None:intergenic 60.0%
GAATACCTGGGAGGCTGACC+AGG - chr8.4:35384408-35384427 None:intergenic 60.0%
GACCAGGGAGTGGTGTAGGT+TGG - chr8.4:35384392-35384411 None:intergenic 60.0%
GACCTAACAGCCGGTACCGT+TGG + chr8.4:35384306-35384325 MS.gene47475:CDS 60.0%
GCTTGGCCGGTGCTTCTTTC+TGG + chr8.4:35385699-35385718 MS.gene47475:CDS 60.0%
GGTCAGCCTCCCAGGTATTC+TGG + chr8.4:35384408-35384427 MS.gene47475:CDS 60.0%
GTTAGCGGCCGAAGGTCCAA+GGG + chr8.4:35384455-35384474 MS.gene47475:CDS 60.0%
TGCCGTCAGGCAGACGTTAG+CGG + chr8.4:35384440-35384459 MS.gene47475:CDS 60.0%
TTAGCGGCCGAAGGTCCAAG+GGG + chr8.4:35384456-35384475 MS.gene47475:CDS 60.0%
! CAAAGTGCGCTTGCTGGCAC+TGG + chr8.4:35385449-35385468 MS.gene47475:CDS 60.0%
! TGGCACTGGAACAGCAGCTG+TGG + chr8.4:35385463-35385482 MS.gene47475:CDS 60.0%
!! CTCCAACGGTACCGGCTGTT+AGG - chr8.4:35384311-35384330 None:intergenic 60.0%
AGGCAGACGTTAGCGGCCGA+AGG + chr8.4:35384447-35384466 MS.gene47475:CDS 65.0%
CGTTAGCGGCCGAAGGTCCA+AGG + chr8.4:35384454-35384473 MS.gene47475:CDS 65.0%
CTCTCACGCCCCCCTCTGAT+CGG - chr8.4:35385532-35385551 None:intergenic 65.0%
GGCCGCTAACGTCTGCCTGA+CGG - chr8.4:35384445-35384464 None:intergenic 65.0%
GGCTGACCAGGGAGTGGTGT+AGG - chr8.4:35384396-35384415 None:intergenic 65.0%
GGCTGCAACCGTAGCAAGCG+GGG - chr8.4:35384502-35384521 None:intergenic 65.0%
! TATGGGCGCCCCGCTTGCTA+CGG + chr8.4:35384491-35384510 MS.gene47475:CDS 65.0%
CACTCCCTGGTCAGCCTCCC+AGG + chr8.4:35384400-35384419 MS.gene47475:CDS 70.0%
CGCAGCCCCTCCAACGGTAC+CGG - chr8.4:35384319-35384338 None:intergenic 70.0%
CTGGGAGGCTGACCAGGGAG+TGG - chr8.4:35384402-35384421 None:intergenic 70.0%
! CGATCAGAGGGGGGCGTGAG+AGG + chr8.4:35385530-35385549 MS.gene47475:CDS 70.0%
!! GCAGGCGGCACCGATACCTC+TGG + chr8.4:35385644-35385663 MS.gene47475:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 35384288 35385940 35384288 ID=MS.gene47475
chr8.4 mRNA 35384288 35385940 35384288 ID=MS.gene47475.t1;Parent=MS.gene47475
chr8.4 exon 35384288 35384679 35384288 ID=MS.gene47475.t1.exon1;Parent=MS.gene47475.t1
chr8.4 CDS 35384288 35384679 35384288 ID=cds.MS.gene47475.t1;Parent=MS.gene47475.t1
chr8.4 exon 35385439 35385940 35385439 ID=MS.gene47475.t1.exon2;Parent=MS.gene47475.t1
chr8.4 CDS 35385439 35385940 35385439 ID=cds.MS.gene47475.t1;Parent=MS.gene47475.t1
Gene Sequence

>MS.gene47475

ATGGGAGACGTGGCTAAGGACCTAACAGCCGGTACCGTTGGAGGGGCTGCGCAATTGATAGTTGGACATCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAACCTACACCACTCCCTGGTCAGCCTCCCAGGTATTCTGGTGCATTTGATGCCGTCAGGCAGACGTTAGCGGCCGAAGGTCCAAGGGGTTTATACAAAGGTATGGGCGCCCCGCTTGCTACGGTTGCAGCCTTCAATGCTGTCCTGTTTACAGTTAGGGGACAAATGGAATCATTAGTGAGGTCCCATCCTGGTGCTCACCTCACAGTGAATCAACAGTTTGTTTGTGGAGCTGGAGCTGGTGTCGCTGTTTCCTTTCTTGCTTGTCCAACTGAATTAATCAAATGCAGGTAGGTCAGCTGTTCTAATTTTCTTCCTTTTCTTTCAATCAATTTGTATAGATTTTTAACGTTCTTTATTCTCTTCCCTTTATTAAATTTTCATTGATTTTGATCTCTTTAGGAAAGAATAGAACTTTTTAGTTTTTATTTGTTTCTCTACAAACCATCCTCTCATAGTTGACATAAACCAGATTGTCATAAGATTGGTTATCAGTATCTTCCGATAAATATGAGGCGTATTTTGATTTGATTAAAAATTGAACCCCAATCGATACAAATCCTTAGTGTCCATCTATTTTGCACATGTATTTCGTCTTGAATCCCTAATGAATCTTACCTAAACTTAGTGTACTCGTCCACTTTTTTATTTTAATTTTGAATAGTCAGTCACTTTTCTTTTGTCATTTGATTCAAAACTTAATTCTTGAATTATTTTGAAATTCATACATGATATATCAGCTCATGATTTTGCTACGTCACTTGTTTTTTTTACGTAAAATGTCTTATTTTAATCAGTAATGTATCATATGATTCATAATAAGATTCGATTCACATTTCAGAAAATAGTTCTTCCAATTCACAACATAAATCTTGATTTTATAACCATGGTCATAAGAATAAACCGAATGAATTCAGCAGCAGATTAGTCATATGATTAGCTATTGCTTATGATTTTTCATATATTATTTAAAACAGGTACTCTCTCTGATACTCAAACTATGTATCGACTTTGTACTTAATTTTTGGTTTCATTATGAATATCATTAGGTTGCAAGCACAAAGTGCGCTTGCTGGCACTGGAACAGCAGCTGTGGCTGTTAAATATGGAGGACCAATGGATGTGGCCCGACAAGTTCTCCGATCAGAGGGGGGCGTGAGAGGTCTTTTCAAAGGCTTGCTTCCCACAATGGGACGTGAGATACCTGGAAACGCGATAATGTTTGGTGTATATGAAGCAATAAAACAACAGTTTGCAGGCGGCACCGATACCTCTGGCCTAAGCCAAGGTTCTCTGATTGTTGCTGGAGGCTTGGCCGGTGCTTCTTTCTGGGGCATCGTTTACCCAACCGATGTTGTTAAAAGTGTGCTTCAAGTAGATGATTATAAGAACCCTAAGTATTCTGGTTCATTTGATGCTTTCAGAAAGATTAAAGCCACTGAGGGATTCAAAGGCCTATACAAGGGTTTTGGTCCTGCAATGGGCAGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTTTAGGATGA

Protein sequence

>MS.gene47475.t1

MGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQPPRYSGAFDAVRQTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMESLVRSHPGAHLTVNQQFVCGAGAGVAVSFLACPTELIKCRLQAQSALAGTGTAAVAVKYGGPMDVARQVLRSEGGVRGLFKGLLPTMGREIPGNAIMFGVYEAIKQQFAGGTDTSGLSQGSLIVAGGLAGASFWGIVYPTDVVKSVLQVDDYKNPKYSGSFDAFRKIKATEGFKGLYKGFGPAMGRSVPANAACFLAYEMTRSALG