Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26351.t1 | XP_024638882.1 | 96.8 | 277 | 9 | 0 | 1 | 277 | 1 | 277 | 3.50E-148 | 534.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26351.t1 | A0A396I9U6 | 96.8 | 277 | 9 | 0 | 1 | 277 | 1 | 277 | 2.5e-148 | 534.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene26351 | 0.800789 | 1.22E-48 | -1.69E-46 |
| MS.gene049389 | MS.gene26351 | 0.809959 | 1.46E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene26351 | 0.853827 | 1.85E-61 | -1.69E-46 |
| MS.gene050128 | MS.gene26351 | 0.839206 | 1.82E-57 | -1.69E-46 |
| MS.gene050301 | MS.gene26351 | 0.839487 | 1.54E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene26351 | 0.804441 | 2.16E-49 | -1.69E-46 |
| MS.gene050398 | MS.gene26351 | 0.822012 | 2.97E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene26351 | 0.805307 | 1.42E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene26351 | 0.813273 | 2.78E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene26351 | 0.818976 | 1.48E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene26351 | 0.809369 | 1.96E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene26351 | 0.82359 | 1.28E-53 | -1.69E-46 |
| MS.gene05316 | MS.gene26351 | 0.801686 | 8.01E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene26351 | 0.82348 | 1.35E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene26351 | 0.836613 | 8.45E-57 | -1.69E-46 |
| MS.gene053928 | MS.gene26351 | 0.83813 | 3.45E-57 | -1.69E-46 |
| MS.gene054011 | MS.gene26351 | 0.802539 | 5.35E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene26351 | 0.804988 | 1.66E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene26351 | 0.813188 | 2.91E-51 | -1.69E-46 |
| MS.gene055133 | MS.gene26351 | 0.829265 | 5.67E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene26351 | 0.80091 | 1.15E-48 | -1.69E-46 |
| MS.gene055422 | MS.gene26351 | 0.821432 | 4.05E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene26351 | 0.810051 | 1.40E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene26351 | 0.822819 | 1.93E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene26351 | 0.805573 | 1.25E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene26351 | 0.81459 | 1.43E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene26351 | 0.831889 | 1.29E-55 | -1.69E-46 |
| MS.gene057794 | MS.gene26351 | 0.806589 | 7.64E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene26351 | 0.812751 | 3.62E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene26351 | 0.828746 | 7.58E-55 | -1.69E-46 |
| MS.gene05811 | MS.gene26351 | 0.8607 | 1.72E-63 | -1.69E-46 |
| MS.gene058236 | MS.gene26351 | 0.801497 | 8.76E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene26351 | 0.816113 | 6.54E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene26351 | 0.848645 | 5.37E-60 | -1.69E-46 |
| MS.gene059294 | MS.gene26351 | 0.822106 | 2.83E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene26351 | 0.815564 | 8.67E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene26351 | 0.815105 | 1.10E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene26351 | 0.825592 | 4.31E-54 | -1.69E-46 |
| MS.gene059974 | MS.gene26351 | 0.811987 | 5.32E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene26351 | 0.873756 | 1.15E-67 | -1.69E-46 |
| MS.gene060476 | MS.gene26351 | 0.804366 | 2.24E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene26351 | 0.837292 | 5.67E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26351.t1 | MTR_4g088515 | 96.642 | 268 | 9 | 0 | 1 | 268 | 1 | 268 | 0.0 | 540 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26351.t1 | AT4G26415 | 44.872 | 234 | 62 | 10 | 3 | 192 | 7 | 217 | 1.04e-43 | 150 |
Find 60 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTCCTCAAGAACTCTT+TGG | 0.228130 | 4.1:+21490911 | MS.gene26351:CDS |
| TCAATGAATATAGTGGAATA+AGG | 0.272127 | 4.1:+21491180 | MS.gene26351:CDS |
| TGGTGTTGTGGCAAAGTTAA+TGG | 0.280238 | 4.1:+21491436 | MS.gene26351:CDS |
| GCCATTTGAGAGGCATGATT+TGG | 0.298125 | 4.1:+21491556 | MS.gene26351:CDS |
| TCCATGTATAGGTCATCTTT+TGG | 0.313265 | 4.1:+21491296 | MS.gene26351:CDS |
| TCTTATGCCTTTCTTCATCT+TGG | 0.319608 | 4.1:-21490937 | None:intergenic |
| TTTCTCCTCAAGAACTCTTT+GGG | 0.349291 | 4.1:+21490912 | MS.gene26351:CDS |
| AACCAACAAAATAGTACTAT+TGG | 0.366556 | 4.1:+21490996 | MS.gene26351:CDS |
| TGGATATTGTATTATGAAAC+CGG | 0.367697 | 4.1:+21491661 | MS.gene26351:CDS |
| GGATGAGTAGTGTTGATTGT+AGG | 0.385703 | 4.1:+21491513 | MS.gene26351:CDS |
| CAATGAATATAGTGGAATAA+GGG | 0.392950 | 4.1:+21491181 | MS.gene26351:CDS |
| AGAACCAAAGCTTGATGAAA+AGG | 0.407802 | 4.1:+21491361 | MS.gene26351:CDS |
| GCCATAGCTTCTAGAGAAAC+CGG | 0.424661 | 4.1:-21491680 | None:intergenic |
| GGTGTTGTGGCAAAGTTAAT+GGG | 0.432813 | 4.1:+21491437 | MS.gene26351:CDS |
| TGTGGCAAAGTTAATGGGTT+TGG | 0.433784 | 4.1:+21491442 | MS.gene26351:CDS |
| TCTTATAGTACAATTAGAAA+TGG | 0.439711 | 4.1:+21491130 | MS.gene26351:CDS |
| CTCCTTGGTTGCCAACTACT+AGG | 0.457255 | 4.1:-21491710 | None:intergenic |
| ACTATAAGATCTTCTAATGT+TGG | 0.471701 | 4.1:-21491116 | None:intergenic |
| GTTAGAAGAAGAAATAGGTC+TGG | 0.472977 | 4.1:+21491623 | MS.gene26351:CDS |
| TCCAAATCATGCCTCTCAAA+TGG | 0.478781 | 4.1:-21491557 | None:intergenic |
| TGCTGCTTGTGATGTCAACT+TGG | 0.485632 | 4.1:-21491040 | None:intergenic |
| ATCTAAACATATCTCCTCCT+TGG | 0.489207 | 4.1:-21491725 | None:intergenic |
| AGTACTATTGGCAATGGCAT+TGG | 0.489373 | 4.1:+21491008 | MS.gene26351:CDS |
| AAAACTAGCAATGGACATGC+AGG | 0.491726 | 4.1:+21491583 | MS.gene26351:CDS |
| CCCAAAAGATGACCTATACA+TGG | 0.498041 | 4.1:-21491297 | None:intergenic |
| TTGTGATGTCAACTTGGCTA+TGG | 0.503039 | 4.1:-21491034 | None:intergenic |
| TTCTCCCCAGCAACTGTTGG+TGG | 0.503702 | 4.1:-21491395 | None:intergenic |
| GTAGGAGACAAAATATAAGA+AGG | 0.511223 | 4.1:+21491531 | MS.gene26351:CDS |
| ATGGAAGAGATTCCATGTAT+AGG | 0.512387 | 4.1:+21491285 | MS.gene26351:CDS |
| ATTAACTTTGCCACAACACC+AGG | 0.513967 | 4.1:-21491434 | None:intergenic |
| TGGCAGGAGGTCCTAGTAGT+TGG | 0.521625 | 4.1:+21491699 | MS.gene26351:CDS |
| ACCGGTTTCTCTAGAAGCTA+TGG | 0.522607 | 4.1:+21491679 | MS.gene26351:CDS |
| TTGCTGGGGAGAACGTGGTT+TGG | 0.527912 | 4.1:+21491405 | MS.gene26351:CDS |
| ACATTGTTAGAAGAAGAAAT+AGG | 0.529346 | 4.1:+21491618 | MS.gene26351:CDS |
| ATGCTTTGAATCAATATCCA+AGG | 0.531501 | 4.1:+21491252 | MS.gene26351:CDS |
| AAATGGAGGAAGAGATGGCA+AGG | 0.533678 | 4.1:+21491147 | MS.gene26351:CDS |
| ATTAGAAATGGAGGAAGAGA+TGG | 0.541356 | 4.1:+21491142 | MS.gene26351:CDS |
| GAGTTCTTGAGGAGAAAGAA+TGG | 0.549925 | 4.1:-21490906 | None:intergenic |
| TTGGGAGCCAAGATGAAGAA+AGG | 0.561593 | 4.1:+21490930 | MS.gene26351:CDS |
| CAAAATAGTACTATTGGCAA+TGG | 0.563916 | 4.1:+21491002 | MS.gene26351:CDS |
| CTTCCATCAAGTGAAAACCT+TGG | 0.575355 | 4.1:-21491269 | None:intergenic |
| TATAGTACAATTAGAAATGG+AGG | 0.575642 | 4.1:+21491133 | MS.gene26351:CDS |
| GTCCTAGTAGTTGGCAACCA+AGG | 0.577078 | 4.1:+21491708 | MS.gene26351:CDS |
| AATGAATATAGTGGAATAAG+GGG | 0.579962 | 4.1:+21491182 | MS.gene26351:CDS |
| TGGCTCCCAAAGAGTTCTTG+AGG | 0.597986 | 4.1:-21490917 | None:intergenic |
| GAAGCTATTCCAGTGTCAGT+AGG | 0.605402 | 4.1:+21491464 | MS.gene26351:CDS |
| TTTGGAGAGAAAACTAGCAA+TGG | 0.605568 | 4.1:+21491574 | MS.gene26351:CDS |
| AACGTGGTTTGGTGTAAACC+TGG | 0.608504 | 4.1:+21491416 | MS.gene26351:CDS |
| GTTTCTCTAGAAGCTATGGC+AGG | 0.610709 | 4.1:+21491683 | MS.gene26351:CDS |
| AACAGTTGCTGGGGAGAACG+TGG | 0.612915 | 4.1:+21491400 | MS.gene26351:CDS |
| AATATAGTGGAATAAGGGGA+AGG | 0.620558 | 4.1:+21491186 | MS.gene26351:CDS |
| GGAGACAAAATATAAGAAGG+AGG | 0.626425 | 4.1:+21491534 | MS.gene26351:CDS |
| TAAGAAGGAGGCCATTTGAG+AGG | 0.627512 | 4.1:+21491546 | MS.gene26351:CDS |
| CTGACATATTAAGATCTGCA+AGG | 0.639107 | 4.1:+21491228 | MS.gene26351:CDS |
| AGTTGACATCACAAGCAGCA+AGG | 0.656859 | 4.1:+21491043 | MS.gene26351:CDS |
| ACGTTCTCCCCAGCAACTGT+TGG | 0.657823 | 4.1:-21491398 | None:intergenic |
| TCTCTAGAAGCTATGGCAGG+AGG | 0.665560 | 4.1:+21491686 | MS.gene26351:CDS |
| TTGGTGTAAACCTGGTGTTG+TGG | 0.669247 | 4.1:+21491424 | MS.gene26351:CDS |
| AAACTAGCAATGGACATGCA+GGG | 0.676573 | 4.1:+21491584 | MS.gene26351:CDS |
| CTAGTAGTTGGCAACCAAGG+AGG | 0.699039 | 4.1:+21491711 | MS.gene26351:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTATAGTACAATTAGAAA+TGG | + | chr4.1:21491130-21491149 | MS.gene26351:CDS | 20.0% |
| ! | AACCAACAAAATAGTACTAT+TGG | + | chr4.1:21490996-21491015 | MS.gene26351:CDS | 25.0% |
| ! | ACATTGTTAGAAGAAGAAAT+AGG | + | chr4.1:21491618-21491637 | MS.gene26351:CDS | 25.0% |
| ! | ACTATAAGATCTTCTAATGT+TGG | - | chr4.1:21491119-21491138 | None:intergenic | 25.0% |
| ! | GAAAAACTCAATGAATATAG+TGG | + | chr4.1:21491173-21491192 | MS.gene26351:CDS | 25.0% |
| ! | TATAGTACAATTAGAAATGG+AGG | + | chr4.1:21491133-21491152 | MS.gene26351:CDS | 25.0% |
| ! | TGGATATTGTATTATGAAAC+CGG | + | chr4.1:21491661-21491680 | MS.gene26351:CDS | 25.0% |
| !! | AATGAATATAGTGGAATAAG+GGG | + | chr4.1:21491182-21491201 | MS.gene26351:CDS | 25.0% |
| !! | CAATGAATATAGTGGAATAA+GGG | + | chr4.1:21491181-21491200 | MS.gene26351:CDS | 25.0% |
| !! | TCAATGAATATAGTGGAATA+AGG | + | chr4.1:21491180-21491199 | MS.gene26351:CDS | 25.0% |
| AAAGATCTGACAAAAAAGAG+AGG | + | chr4.1:21491492-21491511 | MS.gene26351:CDS | 30.0% | |
| AGTTGTCACATTGCAAAAAA+GGG | - | chr4.1:21491076-21491095 | None:intergenic | 30.0% | |
| CAAAATAGTACTATTGGCAA+TGG | + | chr4.1:21491002-21491021 | MS.gene26351:CDS | 30.0% | |
| GTAGGAGACAAAATATAAGA+AGG | + | chr4.1:21491531-21491550 | MS.gene26351:CDS | 30.0% | |
| ! | ATAACCTTTTCATCAAGCTT+TGG | - | chr4.1:21491368-21491387 | None:intergenic | 30.0% |
| ! | ATGCTTTGAATCAATATCCA+AGG | + | chr4.1:21491252-21491271 | MS.gene26351:CDS | 30.0% |
| ! | TGCCAATAGTACTATTTTGT+TGG | - | chr4.1:21491001-21491020 | None:intergenic | 30.0% |
| !!! | ATTTTGTTGGTTTAGAGTTG+AGG | - | chr4.1:21490988-21491007 | None:intergenic | 30.0% |
| !!! | TCTGGTTTTTGCTCTAAAAA+TGG | + | chr4.1:21491641-21491660 | MS.gene26351:CDS | 30.0% |
| AGAACCAAAGCTTGATGAAA+AGG | + | chr4.1:21491361-21491380 | MS.gene26351:CDS | 35.0% | |
| ATGGAAGAGATTCCATGTAT+AGG | + | chr4.1:21491285-21491304 | MS.gene26351:CDS | 35.0% | |
| ATTAGAAATGGAGGAAGAGA+TGG | + | chr4.1:21491142-21491161 | MS.gene26351:CDS | 35.0% | |
| CTGACATATTAAGATCTGCA+AGG | + | chr4.1:21491228-21491247 | MS.gene26351:CDS | 35.0% | |
| GAGTTGTCACATTGCAAAAA+AGG | - | chr4.1:21491077-21491096 | None:intergenic | 35.0% | |
| GGAGACAAAATATAAGAAGG+AGG | + | chr4.1:21491534-21491553 | MS.gene26351:CDS | 35.0% | |
| GTTAGAAGAAGAAATAGGTC+TGG | + | chr4.1:21491623-21491642 | MS.gene26351:CDS | 35.0% | |
| GTTGTCACATTGCAAAAAAG+GGG | - | chr4.1:21491075-21491094 | None:intergenic | 35.0% | |
| TCTTATGCCTTTCTTCATCT+TGG | - | chr4.1:21490940-21490959 | None:intergenic | 35.0% | |
| TTTCTCCTCAAGAACTCTTT+GGG | + | chr4.1:21490912-21490931 | MS.gene26351:CDS | 35.0% | |
| TTTGGAGAGAAAACTAGCAA+TGG | + | chr4.1:21491574-21491593 | MS.gene26351:CDS | 35.0% | |
| ! | AATATAGTGGAATAAGGGGA+AGG | + | chr4.1:21491186-21491205 | MS.gene26351:CDS | 35.0% |
| ! | CCATGTATAGGTCATCTTTT+GGG | + | chr4.1:21491297-21491316 | MS.gene26351:CDS | 35.0% |
| ! | TATCCAAGGTTTTCACTTGA+TGG | + | chr4.1:21491266-21491285 | MS.gene26351:CDS | 35.0% |
| ! | TCCATGTATAGGTCATCTTT+TGG | + | chr4.1:21491296-21491315 | MS.gene26351:CDS | 35.0% |
| !!! | TCATCTTTTGGGACTATAGA+AGG | + | chr4.1:21491308-21491327 | MS.gene26351:CDS | 35.0% |
| AAAACTAGCAATGGACATGC+AGG | + | chr4.1:21491583-21491602 | MS.gene26351:CDS | 40.0% | |
| AAACTAGCAATGGACATGCA+GGG | + | chr4.1:21491584-21491603 | MS.gene26351:CDS | 40.0% | |
| AGTACTATTGGCAATGGCAT+TGG | + | chr4.1:21491008-21491027 | MS.gene26351:CDS | 40.0% | |
| ATTAACTTTGCCACAACACC+AGG | - | chr4.1:21491437-21491456 | None:intergenic | 40.0% | |
| CCCAAAAGATGACCTATACA+TGG | - | chr4.1:21491300-21491319 | None:intergenic | 40.0% | |
| CTTCCATCAAGTGAAAACCT+TGG | - | chr4.1:21491272-21491291 | None:intergenic | 40.0% | |
| CTTTCTCCTCAAGAACTCTT+TGG | + | chr4.1:21490911-21490930 | MS.gene26351:CDS | 40.0% | |
| GAGTTCTTGAGGAGAAAGAA+TGG | - | chr4.1:21490909-21490928 | None:intergenic | 40.0% | |
| TCCAAATCATGCCTCTCAAA+TGG | - | chr4.1:21491560-21491579 | None:intergenic | 40.0% | |
| TTGTGATGTCAACTTGGCTA+TGG | - | chr4.1:21491037-21491056 | None:intergenic | 40.0% | |
| ! | CTTTTTCTACCTACTGACAC+TGG | - | chr4.1:21491476-21491495 | None:intergenic | 40.0% |
| ! | GGTGTTGTGGCAAAGTTAAT+GGG | + | chr4.1:21491437-21491456 | MS.gene26351:CDS | 40.0% |
| !! | GGATGAGTAGTGTTGATTGT+AGG | + | chr4.1:21491513-21491532 | MS.gene26351:CDS | 40.0% |
| !! | TGGTGTTGTGGCAAAGTTAA+TGG | + | chr4.1:21491436-21491455 | MS.gene26351:CDS | 40.0% |
| !! | TGTGGCAAAGTTAATGGGTT+TGG | + | chr4.1:21491442-21491461 | MS.gene26351:CDS | 40.0% |
| AAATGGAGGAAGAGATGGCA+AGG | + | chr4.1:21491147-21491166 | MS.gene26351:CDS | 45.0% | |
| AGTTGACATCACAAGCAGCA+AGG | + | chr4.1:21491043-21491062 | MS.gene26351:CDS | 45.0% | |
| GAAGCTATTCCAGTGTCAGT+AGG | + | chr4.1:21491464-21491483 | MS.gene26351:CDS | 45.0% | |
| TAAGAAGGAGGCCATTTGAG+AGG | + | chr4.1:21491546-21491565 | MS.gene26351:CDS | 45.0% | |
| TTGGGAGCCAAGATGAAGAA+AGG | + | chr4.1:21490930-21490949 | MS.gene26351:CDS | 45.0% | |
| ! | ACCGGTTTCTCTAGAAGCTA+TGG | + | chr4.1:21491679-21491698 | MS.gene26351:CDS | 45.0% |
| ! | GCCATAGCTTCTAGAGAAAC+CGG | - | chr4.1:21491683-21491702 | None:intergenic | 45.0% |
| ! | GCCATTTGAGAGGCATGATT+TGG | + | chr4.1:21491556-21491575 | MS.gene26351:CDS | 45.0% |
| ! | GTTTCTCTAGAAGCTATGGC+AGG | + | chr4.1:21491683-21491702 | MS.gene26351:CDS | 45.0% |
| ! | GTTTTCCACCAACAGTTGCT+GGG | + | chr4.1:21491390-21491409 | MS.gene26351:CDS | 45.0% |
| ! | TGCTGCTTGTGATGTCAACT+TGG | - | chr4.1:21491043-21491062 | None:intergenic | 45.0% |
| ! | TGTTTTCCACCAACAGTTGC+TGG | + | chr4.1:21491389-21491408 | MS.gene26351:CDS | 45.0% |
| ! | TTGGTGTAAACCTGGTGTTG+TGG | + | chr4.1:21491424-21491443 | MS.gene26351:CDS | 45.0% |
| ! | TTTTCCACCAACAGTTGCTG+GGG | + | chr4.1:21491391-21491410 | MS.gene26351:CDS | 45.0% |
| !! | AACGTGGTTTGGTGTAAACC+TGG | + | chr4.1:21491416-21491435 | MS.gene26351:CDS | 45.0% |
| CTAGTAGTTGGCAACCAAGG+AGG | + | chr4.1:21491711-21491730 | MS.gene26351:CDS | 50.0% | |
| CTCCTTGGTTGCCAACTACT+AGG | - | chr4.1:21491713-21491732 | None:intergenic | 50.0% | |
| GTCCTAGTAGTTGGCAACCA+AGG | + | chr4.1:21491708-21491727 | MS.gene26351:CDS | 50.0% | |
| TGGCTCCCAAAGAGTTCTTG+AGG | - | chr4.1:21490920-21490939 | None:intergenic | 50.0% | |
| ! | TCTCTAGAAGCTATGGCAGG+AGG | + | chr4.1:21491686-21491705 | MS.gene26351:CDS | 50.0% |
| AACAGTTGCTGGGGAGAACG+TGG | + | chr4.1:21491400-21491419 | MS.gene26351:CDS | 55.0% | |
| ACGTTCTCCCCAGCAACTGT+TGG | - | chr4.1:21491401-21491420 | None:intergenic | 55.0% | |
| TGGCAGGAGGTCCTAGTAGT+TGG | + | chr4.1:21491699-21491718 | MS.gene26351:CDS | 55.0% | |
| TTCTCCCCAGCAACTGTTGG+TGG | - | chr4.1:21491398-21491417 | None:intergenic | 55.0% | |
| TTGCTGGGGAGAACGTGGTT+TGG | + | chr4.1:21491405-21491424 | MS.gene26351:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 21490903 | 21491745 | 21490903 | ID=MS.gene26351 |
| chr4.1 | mRNA | 21490903 | 21491745 | 21490903 | ID=MS.gene26351.t1;Parent=MS.gene26351 |
| chr4.1 | exon | 21490903 | 21491745 | 21490903 | ID=MS.gene26351.t1.exon1;Parent=MS.gene26351.t1 |
| chr4.1 | CDS | 21490903 | 21491745 | 21490903 | ID=cds.MS.gene26351.t1;Parent=MS.gene26351.t1 |
| Gene Sequence |
| Protein sequence |
