Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057794.t1 | XP_003607121.1 | 96.1 | 76 | 3 | 0 | 1 | 76 | 1 | 76 | 2.50E-32 | 148.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057794.t1 | P33080 | 74.4 | 78 | 20 | 0 | 1 | 78 | 1 | 78 | 1.6e-27 | 123.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057794.t1 | G7JM95 | 96.1 | 76 | 3 | 0 | 1 | 76 | 1 | 76 | 1.8e-32 | 148.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049758 | MS.gene057794 | 0.810837 | 9.45E-51 | -1.69E-46 |
MS.gene050128 | MS.gene057794 | 0.827683 | 1.37E-54 | -1.69E-46 |
MS.gene052178 | MS.gene057794 | 0.817642 | 2.97E-52 | -1.69E-46 |
MS.gene054184 | MS.gene057794 | 0.816523 | 5.29E-52 | -1.69E-46 |
MS.gene054185 | MS.gene057794 | 0.824654 | 7.18E-54 | -1.69E-46 |
MS.gene055133 | MS.gene057794 | 0.856076 | 4.11E-62 | -1.69E-46 |
MS.gene057754 | MS.gene057794 | 0.830303 | 3.17E-55 | -1.69E-46 |
MS.gene057794 | MS.gene057796 | 0.822085 | 2.86E-53 | -1.69E-46 |
MS.gene057794 | MS.gene059894 | 0.801746 | 7.79E-49 | -1.69E-46 |
MS.gene057794 | MS.gene06037 | 0.815928 | 7.19E-52 | -1.69E-46 |
MS.gene057794 | MS.gene060476 | 0.801009 | 1.10E-48 | -1.69E-46 |
MS.gene057794 | MS.gene060495 | 0.801395 | 9.19E-49 | -1.69E-46 |
MS.gene057794 | MS.gene061049 | 0.821205 | 4.57E-53 | -1.69E-46 |
MS.gene057794 | MS.gene061284 | 0.842904 | 1.94E-58 | -1.69E-46 |
MS.gene057794 | MS.gene061679 | 0.8033 | 3.72E-49 | -1.69E-46 |
MS.gene057794 | MS.gene061788 | 0.805172 | 1.52E-49 | -1.69E-46 |
MS.gene057794 | MS.gene062252 | 0.802211 | 6.25E-49 | -1.69E-46 |
MS.gene057794 | MS.gene062975 | 0.931286 | 4.73E-94 | -1.69E-46 |
MS.gene057794 | MS.gene062978 | 0.834356 | 3.14E-56 | -1.69E-46 |
MS.gene057794 | MS.gene06367 | 0.801941 | 7.10E-49 | -1.69E-46 |
MS.gene057794 | MS.gene066337 | 0.829077 | 6.30E-55 | -1.69E-46 |
MS.gene057794 | MS.gene066856 | 0.806714 | 7.19E-50 | -1.69E-46 |
MS.gene057794 | MS.gene070491 | 0.81517 | 1.06E-51 | -1.69E-46 |
MS.gene057794 | MS.gene073925 | 0.810491 | 1.12E-50 | -1.69E-46 |
MS.gene057794 | MS.gene073926 | 0.832797 | 7.70E-56 | -1.69E-46 |
MS.gene057794 | MS.gene07407 | 0.807234 | 5.58E-50 | -1.69E-46 |
MS.gene057794 | MS.gene08514 | 0.809296 | 2.03E-50 | -1.69E-46 |
MS.gene057794 | MS.gene08664 | 0.810319 | 1.22E-50 | -1.69E-46 |
MS.gene057794 | MS.gene08665 | 0.811311 | 7.46E-51 | -1.69E-46 |
MS.gene057794 | MS.gene08691 | 0.830366 | 3.06E-55 | -1.69E-46 |
MS.gene057794 | MS.gene08753 | 0.826405 | 2.76E-54 | -1.69E-46 |
MS.gene057794 | MS.gene23251 | 0.800771 | 1.23E-48 | -1.69E-46 |
MS.gene057794 | MS.gene23318 | 0.823999 | 1.02E-53 | -1.69E-46 |
MS.gene057794 | MS.gene23887 | 0.808183 | 3.51E-50 | -1.69E-46 |
MS.gene057794 | MS.gene23923 | 0.82289 | 1.86E-53 | -1.69E-46 |
MS.gene057794 | MS.gene24039 | 0.804375 | 2.23E-49 | -1.69E-46 |
MS.gene057794 | MS.gene26351 | 0.806589 | 7.64E-50 | -1.69E-46 |
MS.gene057794 | MS.gene26990 | 0.817876 | 2.63E-52 | -1.69E-46 |
MS.gene057794 | MS.gene27217 | 0.824804 | 6.62E-54 | -1.69E-46 |
MS.gene057794 | MS.gene27725 | 0.811236 | 7.75E-51 | -1.69E-46 |
MS.gene057794 | MS.gene29146 | 0.805916 | 1.06E-49 | -1.69E-46 |
MS.gene057794 | MS.gene33248 | 0.855413 | 6.42E-62 | -1.69E-46 |
MS.gene057794 | MS.gene34187 | 0.816569 | 5.17E-52 | -1.69E-46 |
MS.gene057794 | MS.gene35391 | 0.803098 | 4.10E-49 | -1.69E-46 |
MS.gene057794 | MS.gene35514 | 0.801777 | 7.67E-49 | -1.69E-46 |
MS.gene057794 | MS.gene40169 | 0.80186 | 7.38E-49 | -1.69E-46 |
MS.gene057794 | MS.gene40511 | 0.810894 | 9.18E-51 | -1.69E-46 |
MS.gene057794 | MS.gene40923 | 0.802949 | 4.40E-49 | -1.69E-46 |
MS.gene057794 | MS.gene41915 | 0.815701 | 8.08E-52 | -1.69E-46 |
MS.gene057794 | MS.gene44273 | 0.816086 | 6.63E-52 | -1.69E-46 |
MS.gene057794 | MS.gene44274 | 0.802518 | 5.40E-49 | -1.69E-46 |
MS.gene057794 | MS.gene45085 | 0.814944 | 1.19E-51 | -1.69E-46 |
MS.gene057794 | MS.gene46039 | 0.806261 | 8.96E-50 | -1.69E-46 |
MS.gene057794 | MS.gene48438 | 0.823583 | 1.28E-53 | -1.69E-46 |
MS.gene057794 | MS.gene48796 | 0.825149 | 5.49E-54 | -1.69E-46 |
MS.gene057794 | MS.gene50651 | 0.874815 | 5.03E-68 | -1.69E-46 |
MS.gene057794 | MS.gene50653 | 0.801649 | 8.15E-49 | -1.69E-46 |
MS.gene057794 | MS.gene50741 | 0.808929 | 2.43E-50 | -1.69E-46 |
MS.gene057794 | MS.gene52238 | 0.810296 | 1.24E-50 | -1.69E-46 |
MS.gene057794 | MS.gene53556 | 0.815552 | 8.72E-52 | -1.69E-46 |
MS.gene057794 | MS.gene57299 | 0.809824 | 1.56E-50 | -1.69E-46 |
MS.gene057794 | MS.gene59376 | 0.807506 | 4.89E-50 | -1.69E-46 |
MS.gene057794 | MS.gene60321 | 0.810823 | 9.52E-51 | -1.69E-46 |
MS.gene057794 | MS.gene62645 | 0.817183 | 3.76E-52 | -1.69E-46 |
MS.gene057794 | MS.gene64923 | 0.807403 | 5.14E-50 | -1.69E-46 |
MS.gene057794 | MS.gene64994 | 0.815907 | 7.27E-52 | -1.69E-46 |
MS.gene057794 | MS.gene65851 | 0.818482 | 1.92E-52 | -1.69E-46 |
MS.gene057794 | MS.gene66532 | 0.810777 | 9.74E-51 | -1.69E-46 |
MS.gene057794 | MS.gene68393 | 0.82824 | 1.00E-54 | -1.69E-46 |
MS.gene057794 | MS.gene69083 | 0.815473 | 9.08E-52 | -1.69E-46 |
MS.gene057794 | MS.gene69174 | 0.807168 | 5.77E-50 | -1.69E-46 |
MS.gene057794 | MS.gene71024 | 0.828616 | 8.14E-55 | -1.69E-46 |
MS.gene057794 | MS.gene71604 | 0.841288 | 5.20E-58 | -1.69E-46 |
MS.gene057794 | MS.gene74587 | 0.806554 | 7.78E-50 | -1.69E-46 |
MS.gene057794 | MS.gene81086 | 0.803732 | 3.03E-49 | -1.69E-46 |
MS.gene057794 | MS.gene82256 | 0.817942 | 2.54E-52 | -1.69E-46 |
MS.gene057794 | MS.gene82811 | 0.80018 | 1.63E-48 | -1.69E-46 |
MS.gene057794 | MS.gene84560 | 0.827783 | 1.29E-54 | -1.69E-46 |
MS.gene057794 | MS.gene85579 | 0.800216 | 1.60E-48 | -1.69E-46 |
MS.gene057794 | MS.gene86932 | 0.819392 | 1.19E-52 | -1.69E-46 |
MS.gene057794 | MS.gene89238 | 0.837863 | 4.04E-57 | -1.69E-46 |
MS.gene057794 | MS.gene90015 | 0.800267 | 1.56E-48 | -1.69E-46 |
MS.gene057794 | MS.gene94333 | 0.820928 | 5.29E-53 | -1.69E-46 |
MS.gene057794 | MS.gene95864 | 0.817021 | 4.09E-52 | -1.69E-46 |
MS.gene057794 | MS.gene96284 | 0.81511 | 1.09E-51 | -1.69E-46 |
MS.gene057794 | MS.gene96705 | 0.829513 | 4.94E-55 | -1.69E-46 |
MS.gene057794 | MS.gene99375 | 0.80533 | 1.41E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057794.t1 | MTR_4g072480 | 94.805 | 77 | 4 | 0 | 1 | 77 | 1 | 77 | 9.09e-50 | 154 |
MS.gene057794.t1 | MTR_4g072680 | 96.053 | 76 | 3 | 0 | 1 | 76 | 1 | 76 | 1.36e-49 | 153 |
MS.gene057794.t1 | MTR_4g072460 | 93.421 | 76 | 5 | 0 | 1 | 76 | 1 | 76 | 2.75e-48 | 150 |
MS.gene057794.t1 | MTR_4g072620 | 89.610 | 77 | 8 | 0 | 1 | 77 | 1 | 77 | 1.01e-47 | 149 |
MS.gene057794.t1 | MTR_4g072730 | 85.714 | 77 | 11 | 0 | 1 | 77 | 1 | 77 | 2.01e-45 | 143 |
MS.gene057794.t1 | MTR_4g072570 | 80.263 | 76 | 15 | 0 | 1 | 76 | 1 | 76 | 6.78e-40 | 129 |
MS.gene057794.t1 | MTR_4g072660 | 80.519 | 77 | 10 | 1 | 1 | 77 | 1 | 72 | 1.34e-39 | 128 |
MS.gene057794.t1 | MTR_4g072530 | 77.922 | 77 | 17 | 0 | 1 | 77 | 1 | 77 | 2.73e-38 | 124 |
MS.gene057794.t1 | MTR_4g072500 | 77.922 | 77 | 17 | 0 | 1 | 77 | 1 | 77 | 2.80e-38 | 125 |
MS.gene057794.t1 | MTR_3g084150 | 73.684 | 76 | 20 | 0 | 1 | 76 | 1 | 76 | 7.89e-37 | 121 |
MS.gene057794.t1 | MTR_4g072640 | 72.727 | 77 | 21 | 0 | 1 | 77 | 1 | 77 | 4.12e-36 | 119 |
MS.gene057794.t1 | MTR_3g084180 | 72.368 | 76 | 21 | 0 | 1 | 76 | 1 | 76 | 4.69e-36 | 119 |
MS.gene057794.t1 | MTR_8g461410 | 72.368 | 76 | 21 | 0 | 1 | 76 | 1 | 76 | 4.85e-36 | 119 |
MS.gene057794.t1 | MTR_3g110042 | 73.684 | 76 | 20 | 0 | 1 | 76 | 1 | 76 | 1.90e-35 | 117 |
MS.gene057794.t1 | MTR_4g072310 | 70.130 | 77 | 22 | 1 | 1 | 76 | 1 | 77 | 1.20e-34 | 115 |
MS.gene057794.t1 | MTR_4g072240 | 68.831 | 77 | 23 | 1 | 1 | 76 | 1 | 77 | 1.53e-34 | 115 |
MS.gene057794.t1 | MTR_4g072870 | 68.831 | 77 | 23 | 1 | 1 | 76 | 1 | 77 | 1.99e-34 | 115 |
MS.gene057794.t1 | MTR_4g072230 | 71.429 | 77 | 19 | 2 | 1 | 76 | 1 | 75 | 2.53e-34 | 114 |
MS.gene057794.t1 | MTR_3g084250 | 67.949 | 78 | 25 | 0 | 1 | 78 | 1 | 78 | 9.14e-34 | 113 |
MS.gene057794.t1 | MTR_4g072880 | 70.130 | 77 | 22 | 1 | 1 | 76 | 1 | 77 | 1.12e-33 | 113 |
MS.gene057794.t1 | MTR_4g072220 | 66.234 | 77 | 25 | 1 | 1 | 76 | 1 | 77 | 2.87e-33 | 112 |
MS.gene057794.t1 | MTR_4g072300 | 66.234 | 77 | 25 | 1 | 1 | 76 | 1 | 77 | 2.89e-33 | 112 |
MS.gene057794.t1 | MTR_3g117630 | 73.239 | 71 | 19 | 0 | 6 | 76 | 6 | 76 | 3.63e-33 | 112 |
MS.gene057794.t1 | MTR_4g072370 | 65.385 | 78 | 25 | 1 | 1 | 78 | 1 | 76 | 3.74e-33 | 112 |
MS.gene057794.t1 | MTR_3g084240 | 67.105 | 76 | 25 | 0 | 1 | 76 | 1 | 76 | 4.46e-33 | 111 |
MS.gene057794.t1 | MTR_4g072270 | 68.831 | 77 | 23 | 1 | 1 | 76 | 1 | 77 | 6.17e-33 | 111 |
MS.gene057794.t1 | MTR_4g072490 | 66.667 | 78 | 21 | 1 | 1 | 78 | 1 | 73 | 9.98e-33 | 110 |
MS.gene057794.t1 | MTR_4g072630 | 66.667 | 78 | 22 | 1 | 1 | 78 | 1 | 74 | 1.17e-32 | 110 |
MS.gene057794.t1 | MTR_4g072580 | 66.234 | 77 | 21 | 1 | 1 | 77 | 1 | 72 | 1.22e-32 | 110 |
MS.gene057794.t1 | MTR_3g084170 | 67.105 | 76 | 25 | 0 | 1 | 76 | 1 | 76 | 1.83e-32 | 110 |
MS.gene057794.t1 | MTR_4g072260 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 2.53e-32 | 109 |
MS.gene057794.t1 | MTR_4g072890 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 2.87e-32 | 109 |
MS.gene057794.t1 | MTR_4g072550 | 89.474 | 57 | 6 | 0 | 20 | 76 | 31 | 87 | 2.93e-32 | 110 |
MS.gene057794.t1 | MTR_5g008360 | 80.952 | 63 | 12 | 0 | 13 | 75 | 4 | 66 | 3.43e-32 | 109 |
MS.gene057794.t1 | MTR_4g072860 | 67.949 | 78 | 24 | 1 | 1 | 77 | 1 | 78 | 3.47e-32 | 109 |
MS.gene057794.t1 | MTR_4g072250 | 71.429 | 77 | 20 | 2 | 1 | 76 | 1 | 76 | 6.15e-32 | 108 |
MS.gene057794.t1 | MTR_3g084220 | 67.105 | 76 | 25 | 0 | 1 | 76 | 1 | 76 | 6.22e-32 | 108 |
MS.gene057794.t1 | MTR_3g084210 | 66.250 | 80 | 27 | 0 | 1 | 80 | 1 | 80 | 8.82e-32 | 108 |
MS.gene057794.t1 | MTR_4g072740 | 66.667 | 78 | 21 | 1 | 1 | 78 | 1 | 73 | 9.39e-32 | 108 |
MS.gene057794.t1 | MTR_8g461420 | 67.500 | 80 | 26 | 0 | 1 | 80 | 1 | 80 | 1.01e-31 | 108 |
MS.gene057794.t1 | MTR_3g110038 | 64.474 | 76 | 27 | 0 | 1 | 76 | 1 | 76 | 1.90e-31 | 107 |
MS.gene057794.t1 | MTR_4g072330 | 61.538 | 78 | 28 | 1 | 1 | 78 | 1 | 76 | 2.16e-31 | 107 |
MS.gene057794.t1 | MTR_3g084190 | 67.500 | 80 | 26 | 0 | 1 | 80 | 1 | 80 | 2.33e-31 | 107 |
MS.gene057794.t1 | MTR_4g072600 | 65.385 | 78 | 22 | 1 | 1 | 78 | 1 | 73 | 2.49e-31 | 107 |
MS.gene057794.t1 | MTR_3g084230 | 67.500 | 80 | 26 | 0 | 1 | 80 | 1 | 80 | 2.52e-31 | 107 |
MS.gene057794.t1 | MTR_4g072830 | 62.500 | 80 | 28 | 1 | 1 | 80 | 1 | 78 | 2.93e-31 | 107 |
MS.gene057794.t1 | MTR_3g110032 | 63.291 | 79 | 28 | 1 | 1 | 78 | 1 | 79 | 4.10e-31 | 107 |
MS.gene057794.t1 | MTR_4g072610 | 62.963 | 81 | 24 | 1 | 1 | 81 | 1 | 75 | 4.13e-31 | 106 |
MS.gene057794.t1 | MTR_3g084160 | 67.500 | 80 | 26 | 0 | 1 | 80 | 1 | 80 | 1.02e-30 | 105 |
MS.gene057794.t1 | MTR_4g072465 | 62.821 | 78 | 25 | 1 | 1 | 78 | 1 | 74 | 1.55e-30 | 105 |
MS.gene057794.t1 | MTR_4g072470 | 65.789 | 76 | 21 | 1 | 1 | 76 | 1 | 71 | 3.14e-30 | 104 |
MS.gene057794.t1 | MTR_3g084260 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 3.65e-30 | 104 |
MS.gene057794.t1 | MTR_4g072540 | 65.000 | 80 | 24 | 1 | 1 | 80 | 1 | 76 | 1.61e-29 | 102 |
MS.gene057794.t1 | MTR_4g072750 | 63.415 | 82 | 28 | 1 | 1 | 80 | 1 | 82 | 2.32e-29 | 102 |
MS.gene057794.t1 | MTR_4g050700 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 2.49e-29 | 102 |
MS.gene057794.t1 | MTR_2g012410 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 2.49e-29 | 102 |
MS.gene057794.t1 | MTR_4g072820 | 67.532 | 77 | 18 | 2 | 1 | 76 | 1 | 71 | 3.61e-29 | 101 |
MS.gene057794.t1 | MTR_5g008350 | 57.317 | 82 | 30 | 1 | 1 | 82 | 1 | 77 | 4.02e-29 | 101 |
MS.gene057794.t1 | MTR_4g072720 | 65.000 | 80 | 24 | 1 | 1 | 80 | 1 | 76 | 7.26e-29 | 100 |
MS.gene057794.t1 | MTR_3g110045 | 66.667 | 78 | 26 | 0 | 3 | 80 | 62 | 139 | 9.07e-29 | 102 |
MS.gene057794.t1 | MTR_4g072850 | 65.823 | 79 | 25 | 1 | 1 | 77 | 1 | 79 | 1.18e-28 | 100 |
MS.gene057794.t1 | MTR_3g084200 | 61.111 | 72 | 28 | 0 | 1 | 72 | 1 | 72 | 4.10e-28 | 99.8 |
MS.gene057794.t1 | MTR_4g072380 | 55.102 | 98 | 33 | 3 | 1 | 97 | 1 | 88 | 8.40e-28 | 98.2 |
MS.gene057794.t1 | MTR_4g072650 | 61.538 | 78 | 24 | 1 | 1 | 78 | 1 | 72 | 8.94e-28 | 98.2 |
MS.gene057794.t1 | MTR_4g072590 | 65.385 | 78 | 22 | 1 | 1 | 78 | 1 | 73 | 1.36e-27 | 97.8 |
MS.gene057794.t1 | MTR_4g072670 | 61.250 | 80 | 27 | 1 | 1 | 80 | 1 | 76 | 1.92e-27 | 97.4 |
MS.gene057794.t1 | MTR_4g072510 | 62.500 | 80 | 26 | 1 | 1 | 80 | 1 | 76 | 4.45e-27 | 96.3 |
MS.gene057794.t1 | MTR_5g008370 | 75.000 | 60 | 15 | 0 | 18 | 77 | 18 | 77 | 6.73e-27 | 97.4 |
MS.gene057794.t1 | MTR_4g072940 | 77.193 | 57 | 13 | 0 | 21 | 77 | 53 | 109 | 8.43e-27 | 97.1 |
MS.gene057794.t1 | MTR_4g072770 | 59.740 | 77 | 21 | 1 | 1 | 77 | 1 | 67 | 4.32e-25 | 91.3 |
MS.gene057794.t1 | MTR_4g072980 | 55.696 | 79 | 29 | 2 | 1 | 78 | 8 | 81 | 3.84e-24 | 89.4 |
MS.gene057794.t1 | MTR_4g072690 | 61.250 | 80 | 26 | 1 | 1 | 80 | 1 | 75 | 4.36e-24 | 89.0 |
MS.gene057794.t1 | MTR_4g072280 | 54.667 | 75 | 33 | 1 | 1 | 74 | 1 | 75 | 7.32e-24 | 88.2 |
MS.gene057794.t1 | MTR_3g117640 | 74.545 | 55 | 13 | 1 | 25 | 78 | 34 | 88 | 2.87e-23 | 87.4 |
MS.gene057794.t1 | MTR_4g072560 | 54.054 | 74 | 33 | 1 | 8 | 80 | 15 | 88 | 6.51e-23 | 86.3 |
MS.gene057794.t1 | MTR_4g072450 | 60.256 | 78 | 26 | 1 | 1 | 78 | 1 | 73 | 7.75e-23 | 85.5 |
MS.gene057794.t1 | MTR_4g072910 | 54.054 | 74 | 33 | 1 | 9 | 81 | 18 | 91 | 1.19e-22 | 85.5 |
MS.gene057794.t1 | MTR_4g072290 | 51.948 | 77 | 22 | 2 | 1 | 76 | 1 | 63 | 6.21e-20 | 78.2 |
MS.gene057794.t1 | MTR_3g117610 | 60.714 | 56 | 21 | 1 | 23 | 78 | 43 | 97 | 6.05e-19 | 76.6 |
MS.gene057794.t1 | MTR_6g077850 | 50.877 | 57 | 28 | 0 | 24 | 80 | 33 | 89 | 6.42e-19 | 76.3 |
MS.gene057794.t1 | MTR_3g110035 | 60.000 | 55 | 22 | 0 | 26 | 80 | 72 | 126 | 1.32e-18 | 76.3 |
MS.gene057794.t1 | MTR_3g113310 | 58.182 | 55 | 22 | 1 | 23 | 77 | 40 | 93 | 1.93e-18 | 75.1 |
MS.gene057794.t1 | MTR_4g072190 | 55.000 | 60 | 26 | 1 | 19 | 78 | 30 | 88 | 5.68e-18 | 73.6 |
MS.gene057794.t1 | MTR_4g072930 | 54.237 | 59 | 23 | 1 | 27 | 81 | 43 | 101 | 9.07e-17 | 70.9 |
MS.gene057794.t1 | MTR_8g076040 | 57.407 | 54 | 22 | 1 | 24 | 77 | 40 | 92 | 1.11e-15 | 67.8 |
MS.gene057794.t1 | MTR_5g021820 | 50.000 | 58 | 28 | 1 | 24 | 81 | 39 | 95 | 1.39e-15 | 67.8 |
MS.gene057794.t1 | MTR_1g024085 | 38.318 | 107 | 58 | 3 | 24 | 129 | 36 | 135 | 6.00e-14 | 64.3 |
MS.gene057794.t1 | MTR_4g124750 | 44.156 | 77 | 40 | 2 | 4 | 78 | 46 | 121 | 2.15e-13 | 63.2 |
MS.gene057794.t1 | MTR_2g043960 | 54.545 | 55 | 24 | 1 | 24 | 78 | 75 | 128 | 2.67e-13 | 63.2 |
MS.gene057794.t1 | MTR_1g009150 | 53.571 | 56 | 25 | 1 | 25 | 80 | 71 | 125 | 2.01e-12 | 61.2 |
MS.gene057794.t1 | MTR_8g461210 | 40.260 | 77 | 45 | 1 | 4 | 80 | 14 | 89 | 5.13e-12 | 58.9 |
MS.gene057794.t1 | MTR_0388s0020 | 44.776 | 67 | 33 | 2 | 15 | 78 | 65 | 130 | 1.73e-11 | 58.2 |
MS.gene057794.t1 | MTR_7g118010 | 53.571 | 56 | 23 | 2 | 25 | 78 | 23 | 77 | 1.93e-11 | 57.0 |
MS.gene057794.t1 | MTR_4g025830 | 50.877 | 57 | 24 | 2 | 25 | 78 | 79 | 134 | 2.16e-11 | 58.2 |
MS.gene057794.t1 | MTR_3g092220 | 43.077 | 65 | 34 | 2 | 16 | 78 | 24 | 87 | 2.38e-11 | 57.0 |
MS.gene057794.t1 | MTR_4g005310 | 41.026 | 78 | 41 | 3 | 21 | 97 | 58 | 131 | 2.78e-11 | 57.8 |
MS.gene057794.t1 | MTR_4g005320 | 46.667 | 60 | 31 | 1 | 25 | 84 | 70 | 128 | 3.58e-11 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057794.t1 | AT2G21200 | 62.500 | 72 | 25 | 2 | 7 | 76 | 2 | 73 | 5.09e-26 | 94.0 |
MS.gene057794.t1 | AT4G34800 | 50.505 | 99 | 40 | 3 | 1 | 96 | 1 | 93 | 7.82e-26 | 93.6 |
MS.gene057794.t1 | AT4G38840 | 76.364 | 55 | 12 | 1 | 24 | 77 | 32 | 86 | 3.96e-25 | 92.0 |
MS.gene057794.t1 | AT4G34770 | 56.098 | 82 | 34 | 1 | 4 | 83 | 14 | 95 | 7.75e-25 | 91.3 |
MS.gene057794.t1 | AT4G38825 | 56.757 | 74 | 28 | 2 | 7 | 76 | 2 | 75 | 3.33e-24 | 89.4 |
MS.gene057794.t1 | AT2G21210 | 53.086 | 81 | 33 | 2 | 1 | 76 | 1 | 81 | 4.32e-24 | 89.4 |
MS.gene057794.t1 | AT2G21210 | 53.086 | 81 | 33 | 2 | 1 | 76 | 68 | 148 | 1.91e-23 | 89.7 |
MS.gene057794.t1 | AT4G38850 | 57.692 | 78 | 29 | 2 | 7 | 80 | 2 | 79 | 2.01e-23 | 87.4 |
MS.gene057794.t1 | AT5G18020 | 54.545 | 77 | 33 | 2 | 1 | 76 | 1 | 76 | 6.97e-23 | 85.9 |
MS.gene057794.t1 | AT3G03840 | 59.211 | 76 | 26 | 2 | 3 | 76 | 8 | 80 | 1.13e-22 | 85.5 |
MS.gene057794.t1 | AT5G18080 | 55.844 | 77 | 32 | 2 | 1 | 76 | 1 | 76 | 1.85e-22 | 84.7 |
MS.gene057794.t1 | AT4G34810 | 64.407 | 59 | 17 | 1 | 24 | 78 | 47 | 105 | 1.88e-22 | 85.5 |
MS.gene057794.t1 | AT3G03850 | 61.039 | 77 | 23 | 3 | 3 | 77 | 8 | 79 | 2.38e-22 | 84.7 |
MS.gene057794.t1 | AT4G13790 | 48.193 | 83 | 41 | 1 | 1 | 81 | 1 | 83 | 2.40e-22 | 84.7 |
MS.gene057794.t1 | AT5G18060 | 54.667 | 75 | 29 | 2 | 7 | 76 | 2 | 76 | 2.53e-22 | 84.3 |
MS.gene057794.t1 | AT5G18050 | 53.333 | 75 | 30 | 2 | 7 | 76 | 2 | 76 | 1.20e-21 | 82.8 |
MS.gene057794.t1 | AT5G18030 | 54.795 | 73 | 30 | 2 | 7 | 76 | 2 | 74 | 1.51e-21 | 82.4 |
MS.gene057794.t1 | AT3G03820 | 61.111 | 72 | 22 | 2 | 8 | 76 | 13 | 81 | 1.77e-21 | 82.4 |
MS.gene057794.t1 | AT3G03830 | 55.263 | 76 | 25 | 2 | 3 | 75 | 8 | 77 | 8.88e-21 | 80.5 |
MS.gene057794.t1 | AT5G18010 | 51.948 | 77 | 35 | 2 | 1 | 76 | 1 | 76 | 2.75e-20 | 79.3 |
MS.gene057794.t1 | AT4G34790 | 62.500 | 56 | 19 | 1 | 25 | 78 | 39 | 94 | 5.73e-19 | 76.6 |
MS.gene057794.t1 | AT4G38860 | 58.929 | 56 | 23 | 0 | 23 | 78 | 38 | 93 | 1.57e-18 | 75.1 |
MS.gene057794.t1 | AT1G75580 | 60.714 | 56 | 21 | 1 | 23 | 78 | 42 | 96 | 8.97e-18 | 73.6 |
MS.gene057794.t1 | AT2G21220 | 58.929 | 56 | 22 | 1 | 23 | 78 | 38 | 92 | 9.02e-18 | 73.2 |
MS.gene057794.t1 | AT4G34760 | 58.182 | 55 | 22 | 1 | 23 | 77 | 41 | 94 | 3.38e-17 | 72.0 |
MS.gene057794.t1 | AT4G34780 | 60.345 | 58 | 20 | 1 | 23 | 77 | 26 | 83 | 3.56e-17 | 72.0 |
MS.gene057794.t1 | AT1G19830 | 57.143 | 56 | 23 | 1 | 23 | 78 | 46 | 100 | 2.69e-16 | 69.7 |
MS.gene057794.t1 | AT4G36110 | 55.556 | 54 | 23 | 1 | 24 | 77 | 39 | 91 | 1.14e-14 | 65.5 |
MS.gene057794.t1 | AT2G16580 | 50.847 | 59 | 28 | 1 | 23 | 81 | 42 | 99 | 1.15e-14 | 65.5 |
MS.gene057794.t1 | AT2G18010 | 51.724 | 58 | 27 | 1 | 24 | 81 | 47 | 103 | 2.13e-14 | 64.7 |
MS.gene057794.t1 | AT3G43120 | 47.692 | 65 | 33 | 1 | 14 | 78 | 68 | 131 | 9.07e-14 | 64.3 |
MS.gene057794.t1 | AT5G20810 | 54.545 | 55 | 24 | 1 | 24 | 78 | 78 | 131 | 1.71e-12 | 61.2 |
MS.gene057794.t1 | AT5G20810 | 50.000 | 62 | 30 | 1 | 17 | 78 | 71 | 131 | 1.94e-12 | 61.6 |
MS.gene057794.t1 | AT3G20220 | 45.070 | 71 | 33 | 3 | 11 | 80 | 37 | 102 | 2.01e-12 | 60.1 |
MS.gene057794.t1 | AT1G75590 | 35.606 | 132 | 75 | 5 | 4 | 129 | 16 | 143 | 4.58e-12 | 59.7 |
MS.gene057794.t1 | AT5G66260 | 49.123 | 57 | 28 | 1 | 25 | 81 | 34 | 89 | 1.04e-11 | 57.8 |
MS.gene057794.t1 | AT3G51200 | 50.980 | 51 | 24 | 1 | 26 | 76 | 41 | 90 | 1.32e-11 | 57.4 |
MS.gene057794.t1 | AT5G10990 | 37.037 | 108 | 55 | 4 | 24 | 129 | 40 | 136 | 2.60e-11 | 57.8 |
MS.gene057794.t1 | AT3G09870 | 47.619 | 63 | 30 | 2 | 24 | 84 | 44 | 105 | 2.81e-11 | 57.0 |
MS.gene057794.t1 | AT3G12830 | 43.836 | 73 | 39 | 2 | 4 | 76 | 30 | 100 | 5.57e-11 | 56.6 |
Find 27 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCAACAAGTCTTGAAATGA+AGG | 0.342172 | 4.4:+36667201 | None:intergenic |
AGTCAAGCCGAGGAAGAGTT+TGG | 0.367159 | 4.4:-36667180 | MS.gene057794:CDS |
TTACATGGAATTAGCAAAAC+AGG | 0.383422 | 4.4:+36666698 | None:intergenic |
CTCTTAGAATAGAGTTTAAA+CGG | 0.400936 | 4.4:+36667343 | None:intergenic |
GGTTTGTTCAAGTATGATAC+AGG | 0.410295 | 4.4:+36667222 | None:intergenic |
CGTTTAAACTCTATTCTAAG+AGG | 0.413979 | 4.4:-36667342 | MS.gene057794:CDS |
CGTGTATGTTGGAGAGAAAC+TGG | 0.417120 | 4.4:-36667259 | MS.gene057794:CDS |
AAAATCAGTAGAAGTGAGAA+AGG | 0.471464 | 4.4:-36667292 | MS.gene057794:CDS |
AAAATCTATGGGCGTTCCAA+AGG | 0.472091 | 4.4:+36665571 | None:intergenic |
AAATCTATGGGCGTTCCAAA+GGG | 0.529875 | 4.4:+36665572 | None:intergenic |
TACACAGCTAGATATCCCTT+TGG | 0.531737 | 4.4:-36665587 | MS.gene057794:CDS |
ATCATATCCAAACTCTTCCT+CGG | 0.532636 | 4.4:+36667173 | None:intergenic |
GGCTATGTTGCCGTGTATGT+TGG | 0.537170 | 4.4:-36667270 | MS.gene057794:CDS |
GACATCTTCCGTACAAGGAA+TGG | 0.540589 | 4.4:+36667131 | None:intergenic |
AAACTCTATTCTAAGAGGAT+CGG | 0.556160 | 4.4:-36667337 | MS.gene057794:CDS |
GTTTGGATATGATCATCCCA+TGG | 0.570301 | 4.4:-36667163 | MS.gene057794:CDS |
AAATCAGTAGAAGTGAGAAA+GGG | 0.578349 | 4.4:-36667291 | MS.gene057794:CDS |
AGGAATGGTGAGGCCACCCA+TGG | 0.587754 | 4.4:+36667146 | None:intergenic |
CAGTTTCTCTCCAACATACA+CGG | 0.594831 | 4.4:+36667260 | None:intergenic |
GGATATGATCATCCCATGGG+TGG | 0.600402 | 4.4:-36667159 | MS.gene057794:CDS |
AGACTTGTTGAGTCAAGCCG+AGG | 0.633253 | 4.4:-36667190 | MS.gene057794:CDS |
TTTGGATATGATCATCCCAT+GGG | 0.641263 | 4.4:-36667162 | MS.gene057794:CDS |
GGAATGGTGAGGCCACCCAT+GGG | 0.648249 | 4.4:+36667147 | None:intergenic |
CTTCCGTACAAGGAATGGTG+AGG | 0.686019 | 4.4:+36667136 | None:intergenic |
GTTTGTTCAAGTATGATACA+GGG | 0.688837 | 4.4:+36667223 | None:intergenic |
GGATATCTAGCTGTGTACGT+AGG | 0.696914 | 4.4:+36665593 | None:intergenic |
ATGTTGGAGAGAAACTGGCG+CGG | 0.774668 | 4.4:-36667254 | MS.gene057794:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTCATATTTATAAATAAG+GGG | - | chr4.4:36666970-36666989 | MS.gene057794:intron | 10.0% |
!! | ATAATTTAGCCAAATTAATT+AGG | - | chr4.4:36666288-36666307 | MS.gene057794:intron | 15.0% |
!!! | AAGAATTTTAATTACTTACA+TGG | + | chr4.4:36666247-36666266 | None:intergenic | 15.0% |
!!! | AGTTTTTCAAATTATTTTGA+AGG | + | chr4.4:36666542-36666561 | None:intergenic | 15.0% |
!!! | TTTGCTTTAAATATGATATA+GGG | - | chr4.4:36667287-36667306 | MS.gene057794:CDS | 15.0% |
!!! | TTTTGCTTTAAATATGATAT+AGG | - | chr4.4:36667286-36667305 | MS.gene057794:CDS | 15.0% |
!! | ATATTTCACATTTATTCAGA+AGG | - | chr4.4:36666364-36666383 | MS.gene057794:intron | 20.0% |
!! | TATCTCTAATACTAGATAAT+TGG | - | chr4.4:36666695-36666714 | MS.gene057794:intron | 20.0% |
!! | TATTTCACATTTATTCAGAA+GGG | - | chr4.4:36666365-36666384 | MS.gene057794:intron | 20.0% |
!!! | AACTAATTTGCTACAAAAAT+TGG | - | chr4.4:36667099-36667118 | MS.gene057794:intron | 20.0% |
!!! | GTTGTTTTGTAAAAAAACAA+TGG | + | chr4.4:36666762-36666781 | None:intergenic | 20.0% |
!!! | TTTCTATTTTTTTTGCAACA+GGG | - | chr4.4:36666868-36666887 | MS.gene057794:intron | 20.0% |
!!! | TTTGAGACAATTTTCATTAT+AGG | - | chr4.4:36665891-36665910 | MS.gene057794:intron | 20.0% |
!!! | TTTTTTTACAAAACAACAAC+AGG | - | chr4.4:36666765-36666784 | MS.gene057794:intron | 20.0% |
! | AAACTAGATGTTATGAAACA+TGG | - | chr4.4:36666557-36666576 | MS.gene057794:intron | 25.0% |
! | AAAGAACTAACTATTGTAGT+AGG | + | chr4.4:36666136-36666155 | None:intergenic | 25.0% |
! | AAGTAGTATTAGTACTATAG+TGG | + | chr4.4:36666663-36666682 | None:intergenic | 25.0% |
! | AATGGAGAAAATTTACTATC+TGG | - | chr4.4:36665952-36665971 | MS.gene057794:intron | 25.0% |
! | ACGAATTTACTTCTAATGTT+TGG | - | chr4.4:36666494-36666513 | MS.gene057794:intron | 25.0% |
! | CATATAATTTCTTCCTTGAA+TGG | - | chr4.4:36665825-36665844 | MS.gene057794:intron | 25.0% |
! | CATATTTATAAATAAGGGGA+AGG | - | chr4.4:36666974-36666993 | MS.gene057794:intron | 25.0% |
! | CTCTTAGAATAGAGTTTAAA+CGG | + | chr4.4:36665587-36665606 | None:intergenic | 25.0% |
! | GTCATTAAACAAGAAAAAAG+AGG | + | chr4.4:36666002-36666021 | None:intergenic | 25.0% |
! | GTTATTTATTCTTCATAAGC+AGG | + | chr4.4:36666091-36666110 | None:intergenic | 25.0% |
! | TATTTAACCAAACTAACCAA+TGG | + | chr4.4:36666347-36666366 | None:intergenic | 25.0% |
! | TCAAGGAAGAAATTATATGT+TGG | + | chr4.4:36665824-36665843 | None:intergenic | 25.0% |
! | TTAGCCAAATTAATTAGGTT+CGG | - | chr4.4:36666293-36666312 | MS.gene057794:intron | 25.0% |
! | TTGAATCAACTTCAAACTAT+AGG | + | chr4.4:36666402-36666421 | None:intergenic | 25.0% |
!! | CAAAAGAGAAAATCTTTTGA+AGG | - | chr4.4:36667071-36667090 | MS.gene057794:intron | 25.0% |
!! | GTAAATATTACCCTTTTCAT+GGG | - | chr4.4:36665928-36665947 | MS.gene057794:intron | 25.0% |
!! | TGTAAATATTACCCTTTTCA+TGG | - | chr4.4:36665927-36665946 | MS.gene057794:intron | 25.0% |
!!! | GTTTCTATTTTTTTTGCAAC+AGG | - | chr4.4:36666867-36666886 | MS.gene057794:intron | 25.0% |
!!! | TCTTTTGTTGTTATCATACT+TGG | + | chr4.4:36667058-36667077 | None:intergenic | 25.0% |
!!! | TTCTATTTTTTTTGCAACAG+GGG | - | chr4.4:36666869-36666888 | MS.gene057794:intron | 25.0% |
AAAATCAGTAGAAGTGAGAA+AGG | - | chr4.4:36665635-36665654 | MS.gene057794:intron | 30.0% | |
AAATCAGTAGAAGTGAGAAA+GGG | - | chr4.4:36665636-36665655 | MS.gene057794:intron | 30.0% | |
AATTGTAGGTGACAAGTAAA+TGG | - | chr4.4:36666729-36666748 | MS.gene057794:intron | 30.0% | |
ATTTGAGTATGATCATCCAA+TGG | + | chr4.4:36667230-36667249 | None:intergenic | 30.0% | |
CAAATTTCACTAGCTATAGT+TGG | - | chr4.4:36666050-36666069 | MS.gene057794:intron | 30.0% | |
CGTTTAAACTCTATTCTAAG+AGG | - | chr4.4:36665585-36665604 | MS.gene057794:CDS | 30.0% | |
GTTTGTTCAAGTATGATACA+GGG | + | chr4.4:36665707-36665726 | None:intergenic | 30.0% | |
TAAGATTCATAGTCCATTCA+AGG | + | chr4.4:36665841-36665860 | None:intergenic | 30.0% | |
TTACATGGAATTAGCAAAAC+AGG | + | chr4.4:36666232-36666251 | None:intergenic | 30.0% | |
TTTACTTCTAATGTTTGGCA+TGG | - | chr4.4:36666499-36666518 | MS.gene057794:intron | 30.0% | |
TTTGAGTATGATCATCCAAT+GGG | + | chr4.4:36667229-36667248 | None:intergenic | 30.0% | |
! | AAACTCTATTCTAAGAGGAT+CGG | - | chr4.4:36665590-36665609 | MS.gene057794:CDS | 30.0% |
!!! | TCTATTTTTTTTGCAACAGG+GGG | - | chr4.4:36666870-36666889 | MS.gene057794:intron | 30.0% |
AAACTAACCAATGGAAGCAA+AGG | + | chr4.4:36666338-36666357 | None:intergenic | 35.0% | |
AAGAAAACTTCTTCTCTGCA+AGG | - | chr4.4:36667190-36667209 | MS.gene057794:CDS | 35.0% | |
ACTCAAATTGTTCCTCACTT+TGG | - | chr4.4:36667242-36667261 | MS.gene057794:CDS | 35.0% | |
ATCATATCCAAACTCTTCCT+CGG | + | chr4.4:36665757-36665776 | None:intergenic | 35.0% | |
CTCAACAAGTCTTGAAATGA+AGG | + | chr4.4:36665729-36665748 | None:intergenic | 35.0% | |
GACTATGAATCTTACACTGT+AGG | - | chr4.4:36665847-36665866 | MS.gene057794:intron | 35.0% | |
TAGGCCGAACCTAATTAATT+TGG | + | chr4.4:36666300-36666319 | None:intergenic | 35.0% | |
TTCTCCATTTCCCATGAAAA+GGG | + | chr4.4:36665941-36665960 | None:intergenic | 35.0% | |
TTTCTCCATTTCCCATGAAA+AGG | + | chr4.4:36665942-36665961 | None:intergenic | 35.0% | |
TTTGGATATGATCATCCCAT+GGG | - | chr4.4:36665765-36665784 | MS.gene057794:intron | 35.0% | |
! | ATTACCCTTTTCATGGGAAA+TGG | - | chr4.4:36665934-36665953 | MS.gene057794:intron | 35.0% |
! | GGTTTGTTCAAGTATGATAC+AGG | + | chr4.4:36665708-36665727 | None:intergenic | 35.0% |
! | TTTGCTTCCATTGGTTAGTT+TGG | - | chr4.4:36666337-36666356 | MS.gene057794:intron | 35.0% |
!!! | CAAAACAGGTTTTGTTGCAT+AGG | + | chr4.4:36666218-36666237 | None:intergenic | 35.0% |
!!! | CTATTTTTTTTGCAACAGGG+GGG | - | chr4.4:36666871-36666890 | MS.gene057794:intron | 35.0% |
!!! | TATTTTTTTTGCAACAGGGG+GGG | - | chr4.4:36666872-36666891 | MS.gene057794:intron | 35.0% |
AAAGAGCCATAAGATACAGC+AGG | + | chr4.4:36666437-36666456 | None:intergenic | 40.0% | |
AAGAGCCATAAGATACAGCA+GGG | + | chr4.4:36666436-36666455 | None:intergenic | 40.0% | |
CAGTTTCTCTCCAACATACA+CGG | + | chr4.4:36665670-36665689 | None:intergenic | 40.0% | |
GTTATGAAACATGGCATCCA+TGG | - | chr4.4:36666566-36666585 | MS.gene057794:intron | 40.0% | |
GTTGCATAGGAAGATTTAGC+TGG | + | chr4.4:36666205-36666224 | None:intergenic | 40.0% | |
GTTTGGATATGATCATCCCA+TGG | - | chr4.4:36665764-36665783 | MS.gene057794:intron | 40.0% | |
TAATGTTTGGCATGGAGTTC+TGG | - | chr4.4:36666507-36666526 | MS.gene057794:intron | 40.0% | |
TACACAGCTAGATATCCCTT+TGG | - | chr4.4:36667340-36667359 | MS.gene057794:CDS | 40.0% | |
! | AAGGCAGTTTCTGAAGACAT+AGG | + | chr4.4:36666319-36666338 | None:intergenic | 40.0% |
! | TGGCAACTGTCTGAAATTGT+AGG | - | chr4.4:36666715-36666734 | MS.gene057794:CDS | 40.0% |
AACTGCCCTGCTGTATCTTA+TGG | - | chr4.4:36666428-36666447 | MS.gene057794:intron | 45.0% | |
AGAATTGCTGAGCCAAAGTG+AGG | + | chr4.4:36667257-36667276 | None:intergenic | 45.0% | |
ATGGCATCCATGGAAGGAAT+GGG | - | chr4.4:36666576-36666595 | MS.gene057794:intron | 45.0% | |
CGTGTATGTTGGAGAGAAAC+TGG | - | chr4.4:36665668-36665687 | MS.gene057794:intron | 45.0% | |
GAAACTGCCTTTGCTTCCAT+TGG | - | chr4.4:36666328-36666347 | MS.gene057794:intron | 45.0% | |
GACATCTTCCGTACAAGGAA+TGG | + | chr4.4:36665799-36665818 | None:intergenic | 45.0% | |
GAGTATGATCATCCAATGGG+TGG | + | chr4.4:36667226-36667245 | None:intergenic | 45.0% | |
GGATATCTAGCTGTGTACGT+AGG | + | chr4.4:36667337-36667356 | None:intergenic | 45.0% | |
TGAAACATGGCATCCATGGA+AGG | - | chr4.4:36666570-36666589 | MS.gene057794:intron | 45.0% | |
TGGAAGACATCTTCCGTACA+AGG | + | chr4.4:36665804-36665823 | None:intergenic | 45.0% | |
! | CACTTTGGCTCAGCAATTCT+TGG | - | chr4.4:36667257-36667276 | MS.gene057794:CDS | 45.0% |
! | GTTTTCTCCCATTCCTTCCA+TGG | + | chr4.4:36666586-36666605 | None:intergenic | 45.0% |
!!! | ATTTTCATATTTATAAATAA+GGG | - | chr4.4:36666969-36666988 | MS.gene057794:intron | 5.0% |
!!! | TATTTTCATATTTATAAATA+AGG | - | chr4.4:36666968-36666987 | MS.gene057794:intron | 5.0% |
AGTCAAGCCGAGGAAGAGTT+TGG | - | chr4.4:36665747-36665766 | MS.gene057794:intron | 50.0% | |
ATGTTGGAGAGAAACTGGCG+CGG | - | chr4.4:36665673-36665692 | MS.gene057794:intron | 50.0% | |
CATGGCATCCATGGAAGGAA+TGG | - | chr4.4:36666575-36666594 | MS.gene057794:intron | 50.0% | |
CTTCCGTACAAGGAATGGTG+AGG | + | chr4.4:36665794-36665813 | None:intergenic | 50.0% | |
GGAATAGTGAGACCACCCAT+TGG | - | chr4.4:36667211-36667230 | MS.gene057794:CDS | 50.0% | |
GGATATGATCATCCCATGGG+TGG | - | chr4.4:36665768-36665787 | MS.gene057794:intron | 50.0% | |
GGCTATGTTGCCGTGTATGT+TGG | - | chr4.4:36665657-36665676 | MS.gene057794:intron | 50.0% | |
TGGCCTCACCATTCCTTGTA+CGG | - | chr4.4:36665788-36665807 | MS.gene057794:intron | 50.0% | |
!! | AGACTTGTTGAGTCAAGCCG+AGG | - | chr4.4:36665737-36665756 | MS.gene057794:intron | 50.0% |
AGGAATGGTGAGGCCACCCA+TGG | + | chr4.4:36665784-36665803 | None:intergenic | 60.0% | |
GGAATGGTGAGGCCACCCAT+GGG | + | chr4.4:36665783-36665802 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 36665576 | 36667373 | 36665576 | ID=MS.gene057794 |
chr4.4 | mRNA | 36665576 | 36667373 | 36665576 | ID=MS.gene057794.t1;Parent=MS.gene057794 |
chr4.4 | exon | 36667145 | 36667373 | 36667145 | ID=MS.gene057794.t1.exon1;Parent=MS.gene057794.t1 |
chr4.4 | CDS | 36667145 | 36667373 | 36667145 | ID=cds.MS.gene057794.t1;Parent=MS.gene057794.t1 |
chr4.4 | exon | 36666702 | 36666743 | 36666702 | ID=MS.gene057794.t1.exon2;Parent=MS.gene057794.t1 |
chr4.4 | CDS | 36666702 | 36666743 | 36666702 | ID=cds.MS.gene057794.t1;Parent=MS.gene057794.t1 |
chr4.4 | exon | 36665857 | 36665909 | 36665857 | ID=MS.gene057794.t1.exon3;Parent=MS.gene057794.t1 |
chr4.4 | CDS | 36665857 | 36665909 | 36665857 | ID=cds.MS.gene057794.t1;Parent=MS.gene057794.t1 |
chr4.4 | exon | 36665576 | 36665641 | 36665576 | ID=MS.gene057794.t1.exon4;Parent=MS.gene057794.t1 |
chr4.4 | CDS | 36665576 | 36665641 | 36665576 | ID=cds.MS.gene057794.t1;Parent=MS.gene057794.t1 |
Gene Sequence |
Protein sequence |