AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26635


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26635.t1 MTR_4g086130 98.969 388 4 0 1 388 82 469 0.0 794
MS.gene26635.t1 MTR_4g086040 86.305 387 52 1 1 386 85 471 0.0 686
MS.gene26635.t1 MTR_1g019410 67.784 388 122 2 1 386 82 468 0.0 562
MS.gene26635.t1 MTR_8g072260 55.641 390 164 5 1 388 84 466 1.19e-158 454
MS.gene26635.t1 MTR_5g025610 54.522 387 167 5 1 385 82 461 1.35e-153 441
MS.gene26635.t1 MTR_8g072260 55.833 360 150 5 1 358 84 436 5.52e-145 419
MS.gene26635.t1 MTR_5g025610 54.098 366 159 5 1 364 82 440 2.63e-141 409
MS.gene26635.t1 MTR_1g037580 54.427 384 172 2 1 383 91 472 2.27e-137 400
MS.gene26635.t1 MTR_8g072260 52.812 320 142 5 1 318 84 396 6.18e-116 345
MS.gene26635.t1 MTR_5g025610 52.812 320 142 5 1 318 82 394 5.32e-115 341
MS.gene26635.t1 MTR_6g034940 30.591 389 257 5 2 381 91 475 3.46e-70 228
MS.gene26635.t1 MTR_2g031930 32.564 390 253 6 1 383 98 484 3.09e-68 223
MS.gene26635.t1 MTR_2g031930 33.425 365 233 6 1 358 94 455 9.77e-67 218
MS.gene26635.t1 MTR_2g031920 31.888 392 256 5 1 383 94 483 8.25e-66 217
MS.gene26635.t1 MTR_8g077810 33.417 398 235 10 6 383 89 476 2.07e-64 214
MS.gene26635.t1 MTR_0045s0070 32.564 390 253 8 1 387 95 477 2.95e-63 210
MS.gene26635.t1 MTR_0045s0060 30.769 390 260 8 1 387 13 395 1.42e-62 206
MS.gene26635.t1 MTR_5g082520 31.593 364 232 6 5 359 83 438 3.91e-62 207
MS.gene26635.t1 MTR_8g100135 30.052 386 257 6 9 385 94 475 9.50e-62 206
MS.gene26635.t1 MTR_0045s0060 31.008 387 257 8 1 384 95 474 2.64e-61 205
MS.gene26635.t1 MTR_3g112120 29.873 395 266 7 2 388 94 485 2.36e-60 203
MS.gene26635.t1 MTR_8g089800 32.973 370 239 5 1 362 96 464 3.91e-60 202
MS.gene26635.t1 MTR_3g467130 30.311 386 260 3 6 383 89 473 5.90e-60 201
MS.gene26635.t1 MTR_3g467140 30.729 384 257 3 6 381 89 471 4.60e-59 199
MS.gene26635.t1 MTR_5g092150 31.234 381 253 5 7 380 86 464 7.66e-59 198
MS.gene26635.t1 MTR_3g007320 30.052 386 257 8 5 384 83 461 2.62e-58 197
MS.gene26635.t1 MTR_8g016180 31.856 361 238 5 3 359 90 446 2.98e-58 197
MS.gene26635.t1 MTR_5g014250 32.242 397 255 8 1 387 98 490 1.09e-57 196
MS.gene26635.t1 MTR_3g467140 32.836 335 216 3 55 381 5 338 1.43e-56 189
MS.gene26635.t1 MTR_0045s0070 32.687 361 233 8 1 358 95 448 1.53e-56 192
MS.gene26635.t1 MTR_6g015910 30.311 386 256 8 5 384 83 461 2.75e-56 191
MS.gene26635.t1 MTR_5g020020 31.969 391 241 9 9 383 95 476 1.77e-55 190
MS.gene26635.t1 MTR_5g021220 31.172 401 252 6 3 383 89 485 7.90e-55 188
MS.gene26635.t1 MTR_3g070380 30.790 367 233 8 5 359 84 441 1.02e-54 188
MS.gene26635.t1 MTR_4g005230 32.031 384 247 7 1 376 96 473 1.10e-54 187
MS.gene26635.t1 MTR_8g076940 28.684 380 268 3 4 381 101 479 1.37e-54 187
MS.gene26635.t1 MTR_5g010750 29.041 365 252 5 3 362 84 446 1.70e-54 187
MS.gene26635.t1 MTR_5g091760 28.792 389 266 4 1 383 90 473 4.81e-54 186
MS.gene26635.t1 MTR_7g033040 31.250 368 248 5 6 370 89 454 4.91e-54 186
MS.gene26635.t1 MTR_7g016040 28.272 382 266 6 5 383 83 459 1.42e-53 184
MS.gene26635.t1 MTR_5g010750 29.086 361 249 5 3 358 84 442 2.25e-53 183
MS.gene26635.t1 MTR_5g014240 32.405 395 257 6 1 387 97 489 7.44e-53 183
MS.gene26635.t1 MTR_8g076510 30.052 386 258 7 3 381 92 472 1.12e-51 179
MS.gene26635.t1 MTR_8g012970 31.608 367 236 9 19 376 115 475 3.44e-51 178
MS.gene26635.t1 MTR_5g020020 32.738 336 202 8 63 383 76 402 1.13e-47 167
MS.gene26635.t1 MTR_8g089190 31.229 301 198 5 91 384 143 441 1.41e-47 168
MS.gene26635.t1 MTR_1g032950 29.504 383 248 5 1 376 96 463 5.66e-46 164
MS.gene26635.t1 MTR_8g016180 29.664 327 223 4 3 326 90 412 1.89e-45 161
MS.gene26635.t1 MTR_0045s0080 29.063 320 211 7 1 317 95 401 1.45e-41 151
MS.gene26635.t1 MTR_6g069000 28.455 369 242 8 3 358 93 452 8.66e-41 150
MS.gene26635.t1 MTR_6g069000 28.455 369 242 8 3 358 103 462 1.35e-40 149
MS.gene26635.t1 MTR_8g076940 28.049 328 232 3 4 328 101 427 4.74e-40 147
MS.gene26635.t1 MTR_8g100135 25.763 295 207 5 9 295 94 384 4.02e-31 122
MS.gene26635.t1 MTR_8g076940 27.368 285 203 3 4 286 101 383 1.39e-30 120
MS.gene26635.t1 MTR_8g076940 27.660 282 200 3 4 283 101 380 1.92e-30 120
MS.gene26635.t1 MTR_7g016040 26.071 280 202 4 5 283 83 358 5.73e-30 119
MS.gene26635.t1 MTR_8g008530 25.641 390 254 11 1 361 110 492 2.06e-23 102
MS.gene26635.t1 MTR_0147s0030 24.938 405 255 14 1 372 124 512 5.28e-23 100
MS.gene26635.t1 MTR_7g055793 25.672 409 247 17 1 372 62 450 7.33e-23 100
MS.gene26635.t1 MTR_7g055793 25.672 409 247 17 1 372 117 505 1.31e-22 99.8
MS.gene26635.t1 MTR_1g032980 26.016 246 176 2 12 251 79 324 3.98e-22 97.4
MS.gene26635.t1 MTR_8g006495 28.689 244 148 7 144 374 118 348 1.34e-20 92.8
MS.gene26635.t1 MTR_8g469360 27.041 392 217 19 14 361 31 397 2.45e-20 92.4
MS.gene26635.t1 MTR_8g006450 28.689 244 148 7 144 374 231 461 5.15e-20 92.0
MS.gene26635.t1 MTR_2g073440 23.457 405 278 10 1 387 79 469 2.00e-19 90.1
MS.gene26635.t1 MTR_8g089190 27.053 207 144 4 91 292 143 347 2.03e-19 89.0
MS.gene26635.t1 MTR_7g006900 26.349 315 205 11 66 361 139 445 2.41e-19 89.7
MS.gene26635.t1 MTR_1g031700 27.511 229 150 5 146 363 244 467 4.73e-19 89.0
MS.gene26635.t1 MTR_2g073480 23.210 405 279 10 1 387 12 402 5.89e-19 88.2
MS.gene26635.t1 MTR_0457s0020 27.500 200 138 6 19 215 17 212 6.97e-19 85.1
MS.gene26635.t1 MTR_3g093530 29.778 225 140 7 148 361 280 497 7.89e-19 88.6
MS.gene26635.t1 MTR_4g071710 27.237 257 153 7 135 361 229 481 3.90e-18 86.3
MS.gene26635.t1 MTR_4g029690 26.728 217 147 5 1 210 96 307 6.44e-18 84.3
MS.gene26635.t1 MTR_5g018980 24.691 405 248 15 1 361 83 474 7.68e-18 85.5
MS.gene26635.t1 MTR_2g437840 26.147 218 156 2 147 363 250 463 8.64e-18 85.1
MS.gene26635.t1 MTR_1g055325 26.296 270 173 7 130 387 252 507 1.95e-17 84.3
MS.gene26635.t1 MTR_7g079440 26.009 223 142 6 156 362 406 621 2.09e-17 84.3
MS.gene26635.t1 MTR_5g021390 23.367 398 260 11 2 361 91 481 4.56e-17 83.2
MS.gene26635.t1 MTR_2g019640 22.992 361 233 10 28 355 117 465 5.14e-17 82.8
MS.gene26635.t1 MTR_3g058060 23.892 406 250 15 1 363 85 474 7.95e-17 82.4
MS.gene26635.t1 MTR_2g073420 23.855 415 264 10 1 376 90 491 9.05e-17 82.0
MS.gene26635.t1 MTR_8g098565 29.231 260 160 8 138 375 236 493 9.20e-17 82.0
MS.gene26635.t1 MTR_1g103670 28.821 229 145 7 147 363 245 467 9.62e-17 82.0
MS.gene26635.t1 MTR_6g017325 28.049 246 157 8 125 361 246 480 1.13e-16 82.0
MS.gene26635.t1 MTR_4g095050 22.814 263 186 6 110 362 211 466 1.48e-16 81.6
MS.gene26635.t1 MTR_4g113650 23.022 417 277 15 2 384 110 516 1.54e-16 81.6
MS.gene26635.t1 MTR_0181s0030 22.613 398 264 13 3 363 82 472 2.18e-16 80.9
MS.gene26635.t1 MTR_7g098550 26.753 385 245 15 2 361 106 478 2.35e-16 80.9
MS.gene26635.t1 MTR_7g098550 26.190 378 248 14 2 361 106 470 3.06e-16 80.5
MS.gene26635.t1 MTR_1g035140 24.745 392 257 15 1 361 84 468 3.21e-16 80.5
MS.gene26635.t1 MTR_5g016410 23.288 219 163 2 146 363 249 463 3.44e-16 80.5
MS.gene26635.t1 MTR_8g063280 26.282 312 184 13 96 371 177 478 3.73e-16 80.5
MS.gene26635.t1 MTR_5g007460 29.817 218 142 6 151 361 231 444 5.20e-16 79.7
MS.gene26635.t1 MTR_6g035115 24.181 397 265 11 1 370 84 471 9.18e-16 79.0
MS.gene26635.t1 MTR_1g107295 23.858 394 248 14 6 368 117 489 1.02e-15 79.0
MS.gene26635.t1 MTR_1g062190 22.464 414 254 15 1 366 123 517 1.04e-15 79.0
MS.gene26635.t1 MTR_8g076290 21.859 398 267 9 2 361 82 473 1.19e-15 79.0
MS.gene26635.t1 MTR_5g009110 25.769 260 151 8 144 369 151 402 1.76e-15 77.8
MS.gene26635.t1 MTR_4g035330 27.103 214 147 3 148 360 243 448 1.76e-15 78.2
MS.gene26635.t1 MTR_0171s0010 22.222 405 266 12 1 363 83 480 1.91e-15 78.2
MS.gene26635.t1 MTR_5g072980 25.676 222 152 5 149 361 253 470 2.23e-15 77.8
MS.gene26635.t1 MTR_5g072930 25.676 222 152 5 149 361 253 470 2.23e-15 77.8
MS.gene26635.t1 MTR_1g085680 22.392 393 265 11 20 381 127 510 2.34e-15 77.8
MS.gene26635.t1 MTR_5g009110 25.769 260 151 8 144 369 299 550 2.37e-15 78.2
MS.gene26635.t1 MTR_1g022040 22.414 406 291 10 1 387 103 503 2.70e-15 77.8
MS.gene26635.t1 MTR_4g094772 27.570 214 146 3 148 360 246 451 2.84e-15 77.8
MS.gene26635.t1 MTR_7g092600 24.096 249 161 6 137 363 240 482 7.65e-15 76.3
MS.gene26635.t1 MTR_6g022450 28.804 184 119 4 186 361 301 480 9.39e-15 76.3
MS.gene26635.t1 MTR_8g046240 26.068 234 157 6 140 361 245 474 1.00e-14 75.9
MS.gene26635.t1 MTR_2g010380 29.032 248 145 9 138 361 240 480 1.15e-14 75.9
MS.gene26635.t1 MTR_5g007550 28.500 200 131 5 168 361 272 465 1.44e-14 75.5
MS.gene26635.t1 MTR_7g103450 24.537 216 150 3 154 361 275 485 2.03e-14 75.1
MS.gene26635.t1 MTR_5g014230 39.535 86 51 1 302 386 2 87 2.55e-14 68.9
MS.gene26635.t1 MTR_5g007450 28.500 200 131 5 168 361 272 465 2.74e-14 74.7
MS.gene26635.t1 MTR_0171s0020 24.885 217 148 5 158 363 266 478 3.16e-14 74.3
MS.gene26635.t1 MTR_1g107300 27.128 188 113 5 194 368 1 177 3.21e-14 71.6
MS.gene26635.t1 MTR_4g062510 25.000 256 160 5 140 368 241 491 3.38e-14 74.3
MS.gene26635.t1 MTR_5g016440 23.737 198 144 3 169 363 267 460 4.10e-14 73.9
MS.gene26635.t1 MTR_2g437880 25.389 193 139 2 169 360 277 465 5.47e-14 73.6
MS.gene26635.t1 MTR_4g062500 23.837 344 206 9 69 368 156 487 6.82e-14 73.6
MS.gene26635.t1 MTR_8g012590 28.804 184 119 5 186 361 290 469 7.81e-14 73.2
MS.gene26635.t1 MTR_4g094775 23.786 206 150 3 158 362 263 462 8.72e-14 73.2
MS.gene26635.t1 MTR_1g103680 28.696 230 146 7 146 363 245 468 9.24e-14 73.2
MS.gene26635.t1 MTR_8g080520 22.680 388 256 11 5 359 119 495 1.98e-13 72.0
MS.gene26635.t1 MTR_1g097240 26.087 230 151 5 147 361 239 464 2.18e-13 72.0
MS.gene26635.t1 MTR_1g015860 25.153 326 189 10 57 357 200 495 2.55e-13 71.6
MS.gene26635.t1 MTR_3g104560 25.200 250 168 7 121 357 260 503 2.67e-13 71.6
MS.gene26635.t1 MTR_5g026520 25.389 193 130 3 179 361 291 479 2.80e-13 71.6
MS.gene26635.t1 MTR_3g104560 24.803 254 164 7 121 357 125 368 3.11e-13 70.9
MS.gene26635.t1 MTR_6g084770 22.807 399 262 15 1 361 83 473 5.56e-13 70.5
MS.gene26635.t1 MTR_8g469300 25.463 216 147 4 158 363 266 477 6.89e-13 70.5
MS.gene26635.t1 MTR_8g466180 25.124 402 247 18 1 361 81 469 7.21e-13 70.1
MS.gene26635.t1 MTR_2g010320 28.800 250 143 9 138 361 234 474 8.97e-13 70.1
MS.gene26635.t1 MTR_5g034900 28.692 237 147 6 144 362 257 489 1.05e-12 69.7
MS.gene26635.t1 MTR_7g075600 26.250 240 161 7 134 361 235 470 1.47e-12 69.3
MS.gene26635.t1 MTR_7g092620 22.306 399 268 10 3 363 82 476 1.61e-12 69.3
MS.gene26635.t1 MTR_5g019010 22.980 396 263 15 1 361 83 471 1.78e-12 68.9
MS.gene26635.t1 MTR_7g075610 24.280 243 166 6 134 362 234 472 2.12e-12 68.9
MS.gene26635.t1 MTR_4g102280 20.455 396 274 12 1 361 90 479 2.50e-12 68.6
MS.gene26635.t1 MTR_4g104570 26.374 182 124 3 196 371 1 178 2.52e-12 65.9
MS.gene26635.t1 MTR_5g045250 23.454 388 257 14 3 359 108 486 2.82e-12 68.6
MS.gene26635.t1 MTR_3g020780 24.621 264 171 7 129 368 227 486 3.09e-12 68.2
MS.gene26635.t1 MTR_5g095290 23.136 389 263 12 1 361 88 468 4.10e-12 67.8
MS.gene26635.t1 MTR_8g073960 25.000 220 151 5 162 371 288 503 4.45e-12 67.8
MS.gene26635.t1 MTR_3g058230 22.423 388 262 14 1 359 12 389 4.91e-12 67.4
MS.gene26635.t1 MTR_5g095260 22.392 393 262 12 1 361 88 469 5.14e-12 67.8
MS.gene26635.t1 MTR_5g094560 22.481 387 270 13 1 361 86 468 5.97e-12 67.4
MS.gene26635.t1 MTR_3g057980 21.859 398 258 11 1 361 83 464 5.98e-12 67.4
MS.gene26635.t1 MTR_0025s0110 23.545 378 236 14 20 361 139 499 7.69e-12 67.0
MS.gene26635.t1 MTR_2g010530 20.960 396 260 9 1 359 81 460 9.39e-12 66.6
MS.gene26635.t1 MTR_4g104540 25.946 185 127 3 193 371 229 409 9.96e-12 66.6
MS.gene26635.t1 MTR_4g054920 28.235 255 154 9 148 385 272 514 1.06e-11 66.6
MS.gene26635.t1 MTR_3g058220 22.055 399 261 15 1 361 83 469 1.36e-11 66.2
MS.gene26635.t1 MTR_5g094520 22.194 392 265 14 1 361 12 394 1.45e-11 65.9
MS.gene26635.t1 MTR_7g079440 26.816 179 114 5 156 324 406 577 1.78e-11 66.2
MS.gene26635.t1 MTR_5g094520 22.194 392 265 14 1 361 117 499 2.46e-11 65.5
MS.gene26635.t1 MTR_4g078110 24.889 225 150 5 152 361 225 445 2.48e-11 65.5
MS.gene26635.t1 MTR_8g042020 23.861 373 242 12 23 361 132 496 3.03e-11 65.1
MS.gene26635.t1 MTR_6g008500 25.121 207 137 6 161 357 297 495 3.98e-11 65.1
MS.gene26635.t1 MTR_8g073950 24.545 220 152 5 162 371 284 499 4.08e-11 64.7
MS.gene26635.t1 MTR_6g462640 22.912 419 265 16 1 378 82 483 4.23e-11 64.7
MS.gene26635.t1 MTR_5g094840 21.939 392 267 12 1 361 91 474 4.34e-11 64.7
MS.gene26635.t1 MTR_7g075580 25.108 231 154 7 146 362 246 471 4.50e-11 64.7
MS.gene26635.t1 MTR_3g057800 20.918 392 273 12 1 361 82 467 4.82e-11 64.7
MS.gene26635.t1 MTR_5g070850 20.759 395 274 12 1 361 83 472 4.86e-11 64.7
MS.gene26635.t1 MTR_5g073320 22.129 357 243 13 32 361 121 469 5.78e-11 64.3
MS.gene26635.t1 MTR_7g027960 22.835 254 154 5 147 368 234 477 7.75e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26635.t1 AT3G19270 71.244 386 110 1 1 386 81 465 0.0 594
MS.gene26635.t1 AT3G19270 71.031 359 103 1 1 359 81 438 0.0 552
MS.gene26635.t1 AT4G19230 57.513 386 157 3 1 386 83 461 1.29e-167 477
MS.gene26635.t1 AT5G45340 56.736 386 160 4 1 386 83 461 7.15e-164 468
MS.gene26635.t1 AT4G19230 56.201 379 152 5 1 374 83 452 3.92e-155 446
MS.gene26635.t1 AT2G29090 54.948 384 171 2 1 383 1 383 4.71e-151 432
MS.gene26635.t1 AT5G45340 56.983 358 147 4 1 358 83 433 7.17e-151 434
MS.gene26635.t1 AT2G29090 54.948 384 171 2 1 383 96 478 1.20e-148 429
MS.gene26635.t1 AT2G29090 54.948 384 171 2 1 383 96 478 1.20e-148 429
MS.gene26635.t1 AT1G05160 34.184 392 246 7 1 383 98 486 1.13e-72 235
MS.gene26635.t1 AT1G05160 34.184 392 246 7 1 383 98 486 1.13e-72 235
MS.gene26635.t1 AT2G32440 34.772 394 245 8 1 386 97 486 5.51e-70 228
MS.gene26635.t1 AT2G32440 34.772 394 245 8 1 386 97 486 5.51e-70 228
MS.gene26635.t1 AT2G29090 49.115 226 113 2 1 225 96 320 5.25e-64 208
MS.gene26635.t1 AT1G19630 32.143 392 254 8 2 386 88 474 5.04e-61 204
MS.gene26635.t1 AT5G36110 32.405 395 244 9 1 383 89 472 4.53e-60 202
MS.gene26635.t1 AT5G05690 33.333 387 238 8 5 381 86 462 2.02e-58 197
MS.gene26635.t1 AT3G50660 31.765 425 234 10 9 387 98 512 1.96e-57 196
MS.gene26635.t1 AT1G19630 31.868 364 237 7 2 359 88 446 4.16e-56 191
MS.gene26635.t1 AT5G38970 28.763 372 256 6 6 374 4 369 7.48e-53 180
MS.gene26635.t1 AT5G38970 28.763 372 256 6 6 374 4 369 7.48e-53 180
MS.gene26635.t1 AT1G12740 29.620 368 246 4 3 362 90 452 8.57e-53 182
MS.gene26635.t1 AT1G12740 29.620 368 246 4 3 362 84 446 9.06e-53 182
MS.gene26635.t1 AT3G30180 29.640 361 248 5 6 363 85 442 1.27e-52 182
MS.gene26635.t1 AT5G38970 28.809 361 251 5 6 363 85 442 4.40e-52 180
MS.gene26635.t1 AT5G05690 32.670 352 217 8 40 381 2 343 5.40e-51 174
MS.gene26635.t1 AT2G42850 30.256 390 258 7 1 383 97 479 2.70e-50 176
MS.gene26635.t1 AT1G12740 29.144 374 246 5 3 362 84 452 3.30e-50 176
MS.gene26635.t1 AT3G13730 30.874 366 240 6 3 359 104 465 1.81e-49 174
MS.gene26635.t1 AT3G13730 30.685 365 240 6 3 358 104 464 5.10e-48 169
MS.gene26635.t1 AT4G36380 29.508 366 248 5 3 359 122 486 7.51e-48 170
MS.gene26635.t1 AT5G05690 33.125 320 199 6 5 318 86 396 5.80e-46 162
MS.gene26635.t1 AT1G55940 29.380 371 240 10 3 357 99 463 8.12e-45 161
MS.gene26635.t1 AT1G55940 28.723 376 246 10 3 362 99 468 2.09e-44 160
MS.gene26635.t1 AT5G14400 28.753 393 232 12 10 384 2 364 6.23e-44 156
MS.gene26635.t1 AT5G48000 29.231 390 266 8 1 383 86 472 6.63e-44 159
MS.gene26635.t1 AT5G48000 29.231 390 266 8 1 383 86 472 6.63e-44 159
MS.gene26635.t1 AT5G48000 29.231 390 266 8 1 383 86 472 6.63e-44 159
MS.gene26635.t1 AT5G48000 29.231 390 266 8 1 383 86 472 6.63e-44 159
MS.gene26635.t1 AT5G48000 29.231 390 266 8 1 383 86 472 6.63e-44 159
MS.gene26635.t1 AT5G48000 29.231 390 266 8 1 383 86 472 6.63e-44 159
MS.gene26635.t1 AT5G14400 28.715 397 235 12 6 384 52 418 1.61e-43 156
MS.gene26635.t1 AT1G19630 30.960 323 212 7 2 318 88 405 1.68e-43 157
MS.gene26635.t1 AT5G48000 29.231 390 266 8 1 383 127 513 1.90e-43 158
MS.gene26635.t1 AT1G73340 27.882 373 238 8 3 359 96 453 4.25e-42 154
MS.gene26635.t1 AT5G14400 29.155 367 218 10 6 359 52 389 1.48e-41 150
MS.gene26635.t1 AT5G38970 28.076 317 224 4 6 321 85 398 2.06e-41 151
MS.gene26635.t1 AT3G50660 30.029 343 198 8 9 318 98 431 3.21e-41 151
MS.gene26635.t1 AT1G78490 28.307 378 261 8 3 373 88 462 3.90e-38 143
MS.gene26635.t1 AT3G44970 26.870 361 249 6 11 361 96 451 5.02e-37 140
MS.gene26635.t1 AT4G15300 27.143 350 239 7 21 361 93 435 1.88e-35 135
MS.gene26635.t1 AT4G15300 27.143 350 239 7 21 361 103 445 2.13e-35 135
MS.gene26635.t1 AT4G15396 27.299 348 242 7 21 361 103 446 4.53e-35 135
MS.gene26635.t1 AT1G65670 28.286 350 231 7 21 361 103 441 8.42e-35 134
MS.gene26635.t1 AT4G15393 26.724 348 242 8 21 361 103 444 3.06e-34 132
MS.gene26635.t1 AT4G15396 27.168 346 241 7 21 359 103 444 1.51e-33 130
MS.gene26635.t1 AT5G36130 44.444 135 73 2 251 383 1 135 2.02e-32 119
MS.gene26635.t1 AT4G15300 26.374 364 238 9 21 361 101 457 5.44e-32 126
MS.gene26635.t1 AT5G36110 28.808 302 194 7 1 292 89 379 1.05e-29 118
MS.gene26635.t1 AT3G30290 25.360 347 249 7 21 361 33 375 1.58e-29 118
MS.gene26635.t1 AT4G15310 28.613 346 231 8 25 361 110 448 4.69e-28 115
MS.gene26635.t1 AT1G12740 25.347 288 205 3 3 285 84 366 5.03e-28 113
MS.gene26635.t1 AT4G15396 25.429 350 225 8 21 361 103 425 2.08e-27 113
MS.gene26635.t1 AT1G78490 26.250 320 230 6 3 318 88 405 6.99e-27 111
MS.gene26635.t1 AT4G15396 25.249 301 219 5 21 318 103 400 6.27e-24 102
MS.gene26635.t1 AT2G42850 28.763 299 199 7 1 292 97 388 1.23e-23 101
MS.gene26635.t1 AT4G15393 25.413 303 214 7 21 318 103 398 1.75e-23 101
MS.gene26635.t1 AT5G14400 26.897 290 189 8 6 283 52 330 5.40e-23 99.0
MS.gene26635.t1 AT4G36380 25.175 286 208 4 3 283 122 406 2.35e-21 95.5
MS.gene26635.t1 AT4G37370 24.545 220 161 2 147 365 247 462 1.06e-20 94.0
MS.gene26635.t1 AT3G28740 25.346 217 157 2 147 362 256 468 1.14e-20 94.0
MS.gene26635.t1 AT2G26710 23.469 392 254 12 29 387 137 515 4.67e-20 92.4
MS.gene26635.t1 AT4G37400 26.531 245 163 5 132 366 228 465 7.17e-20 91.7
MS.gene26635.t1 AT4G37320 23.182 220 164 2 147 365 248 463 1.74e-19 90.5
MS.gene26635.t1 AT2G46960 23.373 415 272 14 2 381 108 511 3.95e-19 89.4
MS.gene26635.t1 AT1G74110 23.415 410 252 15 3 363 115 511 5.59e-19 89.0
MS.gene26635.t1 AT2G23190 23.853 218 161 2 147 363 292 505 6.33e-19 89.0
MS.gene26635.t1 AT1G11680 28.627 255 156 7 133 374 222 463 1.02e-18 88.2
MS.gene26635.t1 AT5G24910 22.525 404 274 12 17 386 133 531 1.14e-18 88.2
MS.gene26635.t1 AT5G57220 28.780 205 139 3 161 362 255 455 1.43e-18 87.8
MS.gene26635.t1 AT5G04330 22.362 398 269 10 1 361 78 472 1.51e-18 87.8
MS.gene26635.t1 AT2G46960 23.773 387 250 13 29 381 20 395 1.65e-18 87.0
MS.gene26635.t1 AT1G66540 25.229 218 155 3 149 365 81 291 3.20e-18 85.1
MS.gene26635.t1 AT1G66540 25.229 218 155 3 149 365 140 350 3.95e-18 85.5
MS.gene26635.t1 AT4G37360 26.768 198 140 2 169 365 270 463 6.67e-18 85.5
MS.gene26635.t1 AT4G15393 25.909 220 154 4 103 318 151 365 7.70e-18 84.7
MS.gene26635.t1 AT4G15110 26.154 260 150 7 144 369 307 558 1.06e-17 85.1
MS.gene26635.t1 AT4G37340 24.434 221 161 3 147 365 247 463 1.12e-17 85.1
MS.gene26635.t1 AT5G36140 26.271 236 158 6 1 226 85 314 4.34e-17 81.6
MS.gene26635.t1 AT3G20940 23.836 365 241 12 32 363 122 482 4.52e-17 83.2
MS.gene26635.t1 AT4G37430 21.988 332 224 10 45 362 154 464 5.90e-17 82.8
MS.gene26635.t1 AT4G37410 25.523 239 163 5 132 362 230 461 7.03e-17 82.4
MS.gene26635.t1 AT2G28860 22.409 357 246 8 28 362 114 461 7.08e-17 82.4
MS.gene26635.t1 AT2G34500 22.543 346 232 10 28 349 113 446 1.20e-16 82.0
MS.gene26635.t1 AT2G28850 22.409 357 246 7 28 362 114 461 3.13e-16 80.5
MS.gene26635.t1 AT2G27010 22.692 260 181 6 132 375 214 469 3.47e-16 80.5
MS.gene26635.t1 AT4G37330 24.771 218 159 2 147 363 245 458 3.71e-16 80.5
MS.gene26635.t1 AT5G24900 26.961 204 133 5 189 383 210 406 4.19e-16 79.7
MS.gene26635.t1 AT4G36220 22.195 401 267 8 2 361 87 483 4.25e-16 80.1
MS.gene26635.t1 AT5G24900 26.961 204 133 5 189 383 327 523 7.32e-16 79.7
MS.gene26635.t1 AT2G23220 21.818 220 167 2 147 365 263 478 9.68e-16 79.3
MS.gene26635.t1 AT3G61040 24.181 397 265 9 1 368 79 468 1.58e-15 78.6
MS.gene26635.t1 AT5G67310 28.571 224 134 7 148 360 261 469 2.34e-15 77.8
MS.gene26635.t1 AT2G46660 23.604 394 245 16 4 359 122 497 3.29e-15 77.4
MS.gene26635.t1 AT4G31940 27.604 192 120 6 165 342 283 469 3.56e-15 77.4
MS.gene26635.t1 AT2G34490 21.867 375 266 10 28 379 114 484 3.88e-15 77.4
MS.gene26635.t1 AT1G64930 29.268 205 117 6 178 365 291 484 4.05e-15 77.4
MS.gene26635.t1 AT3G53130 23.171 410 256 14 1 366 123 517 5.85e-15 76.6
MS.gene26635.t1 AT5G25120 26.961 204 135 4 168 361 262 461 6.12e-15 76.6
MS.gene26635.t1 AT4G31950 26.484 219 136 7 144 342 244 457 9.50e-15 76.3
MS.gene26635.t1 AT4G37310 24.314 255 176 6 140 381 238 488 1.26e-14 75.9
MS.gene26635.t1 AT2G42250 25.463 216 142 4 165 365 274 485 2.13e-14 75.1
MS.gene26635.t1 AT5G36220 19.315 321 239 5 45 363 165 467 2.70e-14 74.7
MS.gene26635.t1 AT3G61880 23.990 396 245 14 4 359 118 497 3.65e-14 74.3
MS.gene26635.t1 AT5G36220 20.611 262 195 3 103 363 72 321 5.72e-14 73.2
MS.gene26635.t1 AT3G61880 23.990 396 245 14 4 359 118 497 5.92e-14 73.9
MS.gene26635.t1 AT5G47990 23.077 377 245 16 24 363 113 481 6.53e-14 73.6
MS.gene26635.t1 AT5G42580 20.216 371 251 11 24 363 110 466 8.00e-14 73.2
MS.gene26635.t1 AT2G26170 27.155 232 156 5 132 353 173 401 1.23e-13 72.4
MS.gene26635.t1 AT2G26170 27.039 233 157 5 131 353 255 484 1.27e-13 72.8
MS.gene26635.t1 AT1G50560 24.096 249 169 6 131 363 241 485 1.31e-13 72.8
MS.gene26635.t1 AT5G25140 26.857 175 118 3 193 361 291 461 1.59e-13 72.4
MS.gene26635.t1 AT2G45580 23.770 244 164 5 140 368 90 326 1.79e-13 71.6
MS.gene26635.t1 AT5G09970 23.559 399 249 17 3 359 120 504 2.04e-13 72.0
MS.gene26635.t1 AT2G40890 24.938 405 242 17 1 359 73 461 2.51e-13 71.6
MS.gene26635.t1 AT5G25130 27.174 184 124 3 184 361 282 461 2.68e-13 71.6
MS.gene26635.t1 AT2G45580 23.770 244 164 5 140 368 244 480 3.18e-13 71.2
MS.gene26635.t1 AT1G11600 27.083 192 125 3 179 359 291 478 9.33e-13 70.1
MS.gene26635.t1 AT2G46950 22.074 376 266 10 6 358 169 540 1.98e-12 68.9
MS.gene26635.t1 AT1G28430 21.941 237 167 5 147 369 253 485 2.46e-12 68.6
MS.gene26635.t1 AT4G12330 25.676 222 154 4 146 361 265 481 4.61e-12 67.8
MS.gene26635.t1 AT1G34540 22.359 407 264 14 1 365 78 474 5.48e-12 67.4
MS.gene26635.t1 AT5G05260 23.043 230 163 5 152 371 277 502 1.52e-11 66.2
MS.gene26635.t1 AT3G10560 24.603 252 162 6 139 371 250 492 1.56e-11 66.2
MS.gene26635.t1 AT2G22330 22.273 220 158 5 159 369 320 535 2.25e-11 65.9
MS.gene26635.t1 AT1G75130 24.189 339 220 12 29 342 131 457 2.67e-11 65.5
MS.gene26635.t1 AT2G22330 22.273 220 158 5 159 369 297 512 2.73e-11 65.5
MS.gene26635.t1 AT3G26170 23.902 205 143 4 167 361 268 469 3.64e-11 65.1
MS.gene26635.t1 AT3G26270 21.963 214 154 4 158 361 260 470 8.25e-11 63.9

Find 96 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTAAATTTACCTAAATT+TGG 0.175919 4.1:+23617862 None:intergenic
CGCTTTCCATGAAATGAAAA+AGG 0.175957 4.1:-23619692 MS.gene26635:intron
ATCAATTTCTTGATTGATTC+AGG 0.185642 4.1:+23619781 None:intergenic
AATAAGCTTCTCTTTGCTTT+TGG 0.189516 4.1:+23619879 None:intergenic
GATGTTCCGGGTATCTTATT+TGG 0.196265 4.1:+23619208 None:intergenic
CTTAAGCTGTTCTCTATAAT+TGG 0.196410 4.1:+23619270 None:intergenic
AAAAGCAAAGAGAAGCTTAT+TGG 0.203855 4.1:-23619877 MS.gene26635:CDS
TAAAATCAACATGTTCAATT+TGG 0.206623 4.1:+23617901 None:intergenic
CTAAACTACAAGGATGAAAA+AGG 0.227377 4.1:-23618932 MS.gene26635:CDS
TTATGGCGTCAAGAAGTTTC+TGG 0.232222 4.1:+23618798 None:intergenic
GGATTGGGAATGGGCTATAT+TGG 0.245695 4.1:+23617710 None:intergenic
TTGTATTGTGTAGGTAATAT+TGG 0.249201 4.1:-23618447 MS.gene26635:intron
GCATCATATCATTCACGTTT+AGG 0.258699 4.1:-23618406 MS.gene26635:CDS
ATCATACTCCAAAGCTCTTT+TGG 0.265661 4.1:-23619188 MS.gene26635:intron
TGAGGAGCAGGGTAGAATTC+TGG 0.289769 4.1:+23618180 None:intergenic
CATCATATCATTCACGTTTA+GGG 0.289792 4.1:-23618405 MS.gene26635:CDS
GTTTGGCAGGTGGGAGGTAG+TGG 0.304492 4.1:-23617749 MS.gene26635:intron
AGCTTTGGAGTATGATGTTC+CGG 0.315647 4.1:+23619195 None:intergenic
CCAAATGGCATAAAAGTATT+GGG 0.318496 4.1:+23617959 None:intergenic
ATCATCTAGTAACCAAATTT+AGG 0.324641 4.1:-23617874 MS.gene26635:intron
CTACAGCTAGTGTTCTTACT+TGG 0.327558 4.1:-23618844 MS.gene26635:CDS
CCTCTCTGTCTTTGGTAACT+TGG 0.334282 4.1:-23619296 MS.gene26635:CDS
ATGTTCCGGGTATCTTATTT+GGG 0.340127 4.1:+23619209 None:intergenic
AAGGTCTACCCACAAGATTT+TGG 0.363059 4.1:-23617681 MS.gene26635:CDS
AATTTGGCTAGCTCATTTCC+TGG 0.372245 4.1:+23617917 None:intergenic
GTCGGGATCCTCTCTGTCTT+TGG 0.372445 4.1:-23619304 MS.gene26635:CDS
GGCAGTTCTCTTTCAATGTC+GGG 0.378579 4.1:-23619321 MS.gene26635:intron
GGCATAAAAGTATTGGGCTT+TGG 0.388055 4.1:+23617965 None:intergenic
GGCATTACTTTCCAACCCTT+TGG 0.388434 4.1:+23618228 None:intergenic
TTGAATGAGAAGGATCTATT+AGG 0.391625 4.1:-23618962 MS.gene26635:CDS
TAAATTTGGTTACTAGATGA+TGG 0.399270 4.1:+23617876 None:intergenic
GCCAAATGGCATAAAAGTAT+TGG 0.401232 4.1:+23617958 None:intergenic
GGTAGACCTTGCTGAGGGAT+TGG 0.409632 4.1:+23617694 None:intergenic
TAGTATACCTCAAATCTTGA+TGG 0.414171 4.1:+23618147 None:intergenic
CATCCTTGTAGTTTAGCAAA+TGG 0.417428 4.1:+23618939 None:intergenic
TCATTTCCTCACTAGAATCC+TGG 0.422005 4.1:-23619738 MS.gene26635:CDS
GCAGCTTACCAAAAGAGCTT+TGG 0.423797 4.1:+23619180 None:intergenic
TTTGGCAGGTGGGAGGTAGT+GGG 0.445491 4.1:-23617748 MS.gene26635:intron
AAATATGCCACTTACTCATA+AGG 0.449078 4.1:-23618597 MS.gene26635:intron
TTTATCTGACCCCATGTCAA+TGG 0.449977 4.1:+23618620 None:intergenic
TGGAATCTTCCCTCCATCAT+TGG 0.450558 4.1:+23618640 None:intergenic
GTAGACCTTGCTGAGGGATT+GGG 0.450729 4.1:+23617695 None:intergenic
GCTTTGGAGTATGATGTTCC+GGG 0.462286 4.1:+23619196 None:intergenic
GGGTCAAAATTATGAGGAGC+AGG 0.462427 4.1:+23618168 None:intergenic
TGGCAGTTCTCTTTCAATGT+CGG 0.465740 4.1:-23619322 MS.gene26635:intron
ATATGATGCTTGACATCCTT+AGG 0.466886 4.1:+23618420 None:intergenic
CATTTCCTCACTAGAATCCT+GGG 0.467464 4.1:-23619737 MS.gene26635:CDS
TTTGATTCTCCAAAATCTTG+TGG 0.468913 4.1:+23617672 None:intergenic
TGAGATAATTTGCAAGAGAA+AGG 0.471556 4.1:-23618993 MS.gene26635:CDS
AACACAAATCTTGCAGCCTC+AGG 0.480772 4.1:+23619937 None:intergenic
CAATTATAGAGAACAGCTTA+AGG 0.481085 4.1:-23619269 MS.gene26635:CDS
GAAGTTGCTGATAATGTGAT+TGG 0.485666 4.1:-23618890 MS.gene26635:CDS
CCTTGCTGAGGGATTGGGAA+TGG 0.487232 4.1:+23617700 None:intergenic
TACCATACCTTATGAGTAAG+TGG 0.488143 4.1:+23618590 None:intergenic
GATATTTAATACCAAAGGGT+TGG 0.489000 4.1:-23618239 MS.gene26635:CDS
TTGATTCTCCAAAATCTTGT+GGG 0.489166 4.1:+23617673 None:intergenic
CTTGCTGAGGGATTGGGAAT+GGG 0.490233 4.1:+23617701 None:intergenic
CTTGATGGGTCAAAATTATG+AGG 0.491919 4.1:+23618162 None:intergenic
TCAAGGATATTTAATACCAA+AGG 0.499241 4.1:-23618244 MS.gene26635:intron
CAAGGATATTTAATACCAAA+GGG 0.500893 4.1:-23618243 MS.gene26635:intron
GAGATTACCACACTCGTATC+CGG 0.502340 4.1:-23619828 MS.gene26635:CDS
AATGGAGTGCACTCATGTCC+AGG 0.511845 4.1:-23617935 MS.gene26635:CDS
TACGAGTGTGGTAATCTCCT+TGG 0.519185 4.1:+23619833 None:intergenic
CATATTACAGGCTGAGCAGA+TGG 0.524207 4.1:-23618675 MS.gene26635:intron
GGTAGAATTCTGGATTATGA+TGG 0.525486 4.1:+23618190 None:intergenic
AGGCCATTTGCTAAACTACA+AGG 0.540203 4.1:-23618942 MS.gene26635:CDS
GAGTGCACTCCATTGCCAAA+TGG 0.545280 4.1:+23617944 None:intergenic
GCAGTATGTGATACCAATGA+TGG 0.565788 4.1:-23618653 MS.gene26635:CDS
TGAGGCTGCAAGATTTGTGT+TGG 0.565849 4.1:-23619935 MS.gene26635:CDS
AGGTAATATTGGAAAGCCTA+AGG 0.566695 4.1:-23618436 MS.gene26635:CDS
GAGGGAAGATTCCATTGACA+TGG 0.569287 4.1:-23618631 MS.gene26635:CDS
AGGGAAAATGTTAAGTGATG+AGG 0.570322 4.1:-23618912 MS.gene26635:CDS
GGAGCAGAGATTGAATGAGA+AGG 0.573774 4.1:-23618972 MS.gene26635:CDS
AATTACTGCATAGTAGAGAA+AGG 0.574763 4.1:-23619244 MS.gene26635:CDS
AGTATACCTCAAATCTTGAT+GGG 0.581207 4.1:+23618148 None:intergenic
TGTGGTTGATGTGGTATACA+AGG 0.599457 4.1:-23618378 MS.gene26635:CDS
CGAGTTTCCGGATACGAGTG+TGG 0.617194 4.1:+23619821 None:intergenic
GTATGTGATACCAATGATGG+AGG 0.619371 4.1:-23618650 MS.gene26635:CDS
ATTCACGTTTAGGGAAGCTG+TGG 0.619792 4.1:-23618396 MS.gene26635:CDS
TAGGGAAGCTGTGGTTGATG+TGG 0.623756 4.1:-23618387 MS.gene26635:CDS
TCTTTCCCAAATAAGATACC+CGG 0.625072 4.1:-23619214 MS.gene26635:CDS
AGGGAAGATTCCATTGACAT+GGG 0.626500 4.1:-23618630 MS.gene26635:CDS
TTGTGGGTAGACCTTGCTGA+GGG 0.629302 4.1:+23617689 None:intergenic
GAGGTAGTGGGATATCAAAG+TGG 0.640983 4.1:-23617736 MS.gene26635:CDS
ATATTTGTTTGGCAGGTGGG+AGG 0.645744 4.1:-23617755 MS.gene26635:intron
TCTGCATTATTCTTTCACCA+AGG 0.653614 4.1:-23619850 MS.gene26635:CDS
CTTGTGGGTAGACCTTGCTG+AGG 0.655922 4.1:+23617688 None:intergenic
TATGTGATACCAATGATGGA+GGG 0.670681 4.1:-23618649 MS.gene26635:CDS
GGTCAAAATTATGAGGAGCA+GGG 0.673511 4.1:+23618169 None:intergenic
CCATTCCCAATCCCTCAGCA+AGG 0.677459 4.1:-23617700 MS.gene26635:CDS
TGATGGATGTTTCTGAACAG+TGG 0.679204 4.1:+23618207 None:intergenic
CCAAGTTACCAAAGACAGAG+AGG 0.687120 4.1:+23619296 None:intergenic
ATTGTCTAAATTAGGCGAGG+CGG 0.689320 4.1:-23619036 MS.gene26635:intron
GGGAAGATTCCATTGACATG+GGG 0.697651 4.1:-23618629 MS.gene26635:CDS
TGTGATGTTAACAAGTCCTG+AGG 0.742960 4.1:-23619953 None:intergenic
GTGGTTGATGTGGTATACAA+GGG 0.754107 4.1:-23618377 MS.gene26635:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTATATAT+AGG - chr4.1:23618089-23618108 MS.gene26635:intron 0.0%
!! AATTTAAATTTACCTAAATT+TGG + chr4.1:23619759-23619778 None:intergenic 10.0%
!!! TTTTTTTTTATATATAGGAT+CGG - chr4.1:23618094-23618113 MS.gene26635:intron 10.0%
!! AATATAACTTGACTAAAAAT+TGG - chr4.1:23618555-23618574 MS.gene26635:intron 15.0%
!! ATATATATACATATATGACT+AGG + chr4.1:23619531-23619550 None:intergenic 15.0%
!! ATTGCATTATGAATAAAATA+TGG + chr4.1:23619810-23619829 None:intergenic 15.0%
!! TACGATATATAAACATATAA+AGG - chr4.1:23618123-23618142 MS.gene26635:intron 15.0%
!! TATTTATGCTTATGAATATA+TGG - chr4.1:23619610-23619629 MS.gene26635:intron 15.0%
!!! TTAATCTTTTGTACATTTAT+AGG - chr4.1:23619281-23619300 MS.gene26635:CDS 15.0%
!! GATGAAATATATTGTCTTAT+TGG - chr4.1:23618166-23618185 MS.gene26635:CDS 20.0%
!! TAAAATCAACATGTTCAATT+TGG + chr4.1:23619720-23619739 None:intergenic 20.0%
!! TAATAAACTGTACATATTAC+AGG - chr4.1:23618931-23618950 MS.gene26635:CDS 20.0%
!! TTGGTTAAATTGTCTAAATT+AGG - chr4.1:23618574-23618593 MS.gene26635:intron 20.0%
!!! AATACATCAACTTTTTTTGA+AGG + chr4.1:23618026-23618045 None:intergenic 20.0%
!!! AATATTGATTTTCAACACTA+AGG + chr4.1:23618893-23618912 None:intergenic 20.0%
!!! ATATTGATTTTCAACACTAA+GGG + chr4.1:23618892-23618911 None:intergenic 20.0%
!!! TGAATTTTGTTTTCATTTGT+CGG - chr4.1:23618207-23618226 MS.gene26635:CDS 20.0%
! AATCATGAATTTATTGTCAC+TGG - chr4.1:23618234-23618253 MS.gene26635:CDS 25.0%
! ATCATCTAGTAACCAAATTT+AGG - chr4.1:23619744-23619763 MS.gene26635:CDS 25.0%
! ATCATGAATTTATTGTCACT+GGG - chr4.1:23618235-23618254 MS.gene26635:CDS 25.0%
! CAAGGATATTTAATACCAAA+GGG - chr4.1:23619375-23619394 MS.gene26635:intron 25.0%
! GTGACAATAAATTCATGATT+AGG + chr4.1:23618234-23618253 None:intergenic 25.0%
! TAAACTACAAGGATGAAAAA+GGG - chr4.1:23618687-23618706 MS.gene26635:intron 25.0%
! TAAATTTGGTTACTAGATGA+TGG + chr4.1:23619745-23619764 None:intergenic 25.0%
! TATATACATATATGACTAGG+CGG + chr4.1:23619528-23619547 None:intergenic 25.0%
! TCAAGGATATTTAATACCAA+AGG - chr4.1:23619374-23619393 MS.gene26635:intron 25.0%
! TTGTATTGTGTAGGTAATAT+TGG - chr4.1:23619171-23619190 MS.gene26635:intron 25.0%
!! ATCAATTTCTTGATTGATTC+AGG + chr4.1:23617840-23617859 None:intergenic 25.0%
!! ATGACTTCATTTTCAATATC+AGG + chr4.1:23617864-23617883 None:intergenic 25.0%
!! CTTATGAATATATGGATTGA+TGG - chr4.1:23619618-23619637 MS.gene26635:intron 25.0%
!! GTAAATAACTTGTATTGTGT+AGG - chr4.1:23619162-23619181 MS.gene26635:intron 25.0%
!! TGACTTCATTTTCAATATCA+GGG + chr4.1:23617863-23617882 None:intergenic 25.0%
!!! AACAAACCTTTTTCATTTCA+TGG + chr4.1:23617935-23617954 None:intergenic 25.0%
!!! GACAAAAACACTTACTTTTA+TGG + chr4.1:23618840-23618859 None:intergenic 25.0%
!!! TTTTTTATATATAGGATCGG+AGG - chr4.1:23618097-23618116 MS.gene26635:intron 25.0%
AAAAGCAAAGAGAAGCTTAT+TGG - chr4.1:23617741-23617760 MS.gene26635:CDS 30.0%
AATTACTGCATAGTAGAGAA+AGG - chr4.1:23618374-23618393 MS.gene26635:intron 30.0%
ACCAAACCAAACAATAATGA+AGG + chr4.1:23618268-23618287 None:intergenic 30.0%
AGTATACCTCAAATCTTGAT+GGG + chr4.1:23619473-23619492 None:intergenic 30.0%
ATGGATTTCCTATTCCTTAT+TGG - chr4.1:23618866-23618885 MS.gene26635:CDS 30.0%
CAATTATAGAGAACAGCTTA+AGG - chr4.1:23618349-23618368 MS.gene26635:intron 30.0%
CATCATATCATTCACGTTTA+GGG - chr4.1:23619213-23619232 MS.gene26635:CDS 30.0%
CTAAACTACAAGGATGAAAA+AGG - chr4.1:23618686-23618705 MS.gene26635:intron 30.0%
CTTAAGCTGTTCTCTATAAT+TGG + chr4.1:23618351-23618370 None:intergenic 30.0%
GATATTTAATACCAAAGGGT+TGG - chr4.1:23619379-23619398 MS.gene26635:intron 30.0%
GGTTGTGTTCAATATTTGTT+TGG - chr4.1:23619852-23619871 MS.gene26635:CDS 30.0%
TAAATTGTCTAAATTAGGCG+AGG - chr4.1:23618579-23618598 MS.gene26635:intron 30.0%
TACTATATACTTTGCATGCA+TGG - chr4.1:23619062-23619081 MS.gene26635:intron 30.0%
TAGTATACCTCAAATCTTGA+TGG + chr4.1:23619474-23619493 None:intergenic 30.0%
TCCTTCATTATTGTTTGGTT+TGG - chr4.1:23618264-23618283 MS.gene26635:intron 30.0%
TTGAATGAGAAGGATCTATT+AGG - chr4.1:23618656-23618675 MS.gene26635:CDS 30.0%
TTGATTCTCCAAAATCTTGT+GGG + chr4.1:23619948-23619967 None:intergenic 30.0%
TTTGATTCTCCAAAATCTTG+TGG + chr4.1:23619949-23619968 None:intergenic 30.0%
! AAATATGCCACTTACTCATA+AGG - chr4.1:23619021-23619040 MS.gene26635:CDS 30.0%
! AATAAGCTTCTCTTTGCTTT+TGG + chr4.1:23617742-23617761 None:intergenic 30.0%
! ACAAGGGTAAGAATTTTAGA+CGG - chr4.1:23619257-23619276 MS.gene26635:CDS 30.0%
! TGAGATAATTTGCAAGAGAA+AGG - chr4.1:23618625-23618644 MS.gene26635:CDS 30.0%
!! ATAAGCTTCTCTTTGCTTTT+GGG + chr4.1:23617741-23617760 None:intergenic 30.0%
!! CCAAATGGCATAAAAGTATT+GGG + chr4.1:23619662-23619681 None:intergenic 30.0%
!! GTTTGGTTTGGTTTGATTAT+TGG - chr4.1:23618276-23618295 MS.gene26635:intron 30.0%
AAGGAATAGGAAATCCATGA+TGG + chr4.1:23618864-23618883 None:intergenic 35.0%
AGGGAAAATGTTAAGTGATG+AGG - chr4.1:23618706-23618725 MS.gene26635:intron 35.0%
AGGTAATATTGGAAAGCCTA+AGG - chr4.1:23619182-23619201 MS.gene26635:intron 35.0%
ATATGATGCTTGACATCCTT+AGG + chr4.1:23619201-23619220 None:intergenic 35.0%
CATCCTTGTAGTTTAGCAAA+TGG + chr4.1:23618682-23618701 None:intergenic 35.0%
CCAAACAATAATGAAGGAGA+AGG + chr4.1:23618262-23618281 None:intergenic 35.0%
CCTTCTCCTTCATTATTGTT+TGG - chr4.1:23618259-23618278 MS.gene26635:intron 35.0%
CGCTTTCCATGAAATGAAAA+AGG - chr4.1:23617926-23617945 MS.gene26635:CDS 35.0%
GCATCATATCATTCACGTTT+AGG - chr4.1:23619212-23619231 MS.gene26635:CDS 35.0%
GGTAGAATTCTGGATTATGA+TGG + chr4.1:23619431-23619450 None:intergenic 35.0%
GTGTTCAATATTTGTTTGGC+AGG - chr4.1:23619856-23619875 MS.gene26635:CDS 35.0%
GTTCTTTGATGCAACTATCA+AGG - chr4.1:23619357-23619376 MS.gene26635:intron 35.0%
TACCATACCTTATGAGTAAG+TGG + chr4.1:23619031-23619050 None:intergenic 35.0%
TCAATATTTGTTTGGCAGGT+GGG - chr4.1:23619860-23619879 MS.gene26635:CDS 35.0%
TCTGCATTATTCTTTCACCA+AGG - chr4.1:23617768-23617787 MS.gene26635:intron 35.0%
TCTTTCCCAAATAAGATACC+CGG - chr4.1:23618404-23618423 MS.gene26635:CDS 35.0%
TTCAATATTTGTTTGGCAGG+TGG - chr4.1:23619859-23619878 MS.gene26635:CDS 35.0%
! ATCATACTCCAAAGCTCTTT+TGG - chr4.1:23618430-23618449 MS.gene26635:CDS 35.0%
! ATGTTCCGGGTATCTTATTT+GGG + chr4.1:23618412-23618431 None:intergenic 35.0%
! CCCAATACTTTTATGCCATT+TGG - chr4.1:23619659-23619678 MS.gene26635:intron 35.0%
! CTAGAATCCTGGGTTTTTAT+TGG - chr4.1:23617891-23617910 MS.gene26635:CDS 35.0%
! CTTGATGGGTCAAAATTATG+AGG + chr4.1:23619459-23619478 None:intergenic 35.0%
! GAAGTTGCTGATAATGTGAT+TGG - chr4.1:23618728-23618747 MS.gene26635:intron 35.0%
! GCCAAATGGCATAAAAGTAT+TGG + chr4.1:23619663-23619682 None:intergenic 35.0%
! TATGTGATACCAATGATGGA+GGG - chr4.1:23618969-23618988 MS.gene26635:CDS 35.0%
! TTTTGACCCATCAAGATTTG+AGG - chr4.1:23619464-23619483 MS.gene26635:intron 35.0%
!! AAGTGTTTTTGTCTCCATCA+TGG - chr4.1:23618847-23618866 MS.gene26635:CDS 35.0%
!! ACTTTTATGCCATTTGGCAA+TGG - chr4.1:23619665-23619684 MS.gene26635:intron 35.0%
!!! TCTTTGCTTTTGGGATATGT+AGG + chr4.1:23617732-23617751 None:intergenic 35.0%
AAAAACCCAGGATTCTAGTG+AGG + chr4.1:23617889-23617908 None:intergenic 40.0%
ACTAAGGGCCAATAAGGAAT+AGG + chr4.1:23618877-23618896 None:intergenic 40.0%
AGGGAAGATTCCATTGACAT+GGG - chr4.1:23618988-23619007 MS.gene26635:CDS 40.0%
ATACATATATGACTAGGCGG+TGG + chr4.1:23619525-23619544 None:intergenic 40.0%
ATTGTCTAAATTAGGCGAGG+CGG - chr4.1:23618582-23618601 MS.gene26635:intron 40.0%
CATTTCCTCACTAGAATCCT+GGG - chr4.1:23617881-23617900 MS.gene26635:CDS 40.0%
CTACAGCTAGTGTTCTTACT+TGG - chr4.1:23618774-23618793 MS.gene26635:intron 40.0%
GACTTGTCCAATAAAAACCC+AGG + chr4.1:23617901-23617920 None:intergenic 40.0%
GATGTTCCGGGTATCTTATT+TGG + chr4.1:23618413-23618432 None:intergenic 40.0%
GCAGTATGTGATACCAATGA+TGG - chr4.1:23618965-23618984 MS.gene26635:CDS 40.0%
GGTCAAAATTATGAGGAGCA+GGG + chr4.1:23619452-23619471 None:intergenic 40.0%
GTATGTGATACCAATGATGG+AGG - chr4.1:23618968-23618987 MS.gene26635:CDS 40.0%
TCATTTCCTCACTAGAATCC+TGG - chr4.1:23617880-23617899 MS.gene26635:CDS 40.0%
TCGATCACTAACTGCAATTG+CGG - chr4.1:23618509-23618528 MS.gene26635:intron 40.0%
TGGCAGTTCTCTTTCAATGT+CGG - chr4.1:23618296-23618315 MS.gene26635:intron 40.0%
TTATGGCGTCAAGAAGTTTC+TGG + chr4.1:23618823-23618842 None:intergenic 40.0%
TTCAACACTAAGGGCCAATA+AGG + chr4.1:23618883-23618902 None:intergenic 40.0%
TTTATCTGACCCCATGTCAA+TGG + chr4.1:23619001-23619020 None:intergenic 40.0%
! AAGGTCTACCCACAAGATTT+TGG - chr4.1:23619937-23619956 MS.gene26635:CDS 40.0%
! AATTTGGCTAGCTCATTTCC+TGG + chr4.1:23619704-23619723 None:intergenic 40.0%
! AGGCCATTTGCTAAACTACA+AGG - chr4.1:23618676-23618695 MS.gene26635:intron 40.0%
! GTGGTTGATGTGGTATACAA+GGG - chr4.1:23619241-23619260 MS.gene26635:CDS 40.0%
! TCAAGATCAGAGTGCTCATT+TGG - chr4.1:23619831-23619850 MS.gene26635:CDS 40.0%
! TGATGGATGTTTCTGAACAG+TGG + chr4.1:23619414-23619433 None:intergenic 40.0%
! TGCCACTTACTCATAAGGTA+TGG - chr4.1:23619026-23619045 MS.gene26635:intron 40.0%
! TGTGGTTGATGTGGTATACA+AGG - chr4.1:23619240-23619259 MS.gene26635:CDS 40.0%
!! AGCTTTGGAGTATGATGTTC+CGG + chr4.1:23618426-23618445 None:intergenic 40.0%
!! GAGAGTTTTGTACGAGTTTC+CGG + chr4.1:23617812-23617831 None:intergenic 40.0%
!! GGCATAAAAGTATTGGGCTT+TGG + chr4.1:23619656-23619675 None:intergenic 40.0%
AACACAAATCTTGCAGCCTC+AGG + chr4.1:23617684-23617703 None:intergenic 45.0%
ATATTTGTTTGGCAGGTGGG+AGG - chr4.1:23619863-23619882 MS.gene26635:CDS 45.0%
ATTCACGTTTAGGGAAGCTG+TGG - chr4.1:23619222-23619241 MS.gene26635:CDS 45.0%
CATATTACAGGCTGAGCAGA+TGG - chr4.1:23618943-23618962 MS.gene26635:CDS 45.0%
CCAAGTTACCAAAGACAGAG+AGG + chr4.1:23618325-23618344 None:intergenic 45.0%
GAGATTACCACACTCGTATC+CGG - chr4.1:23617790-23617809 MS.gene26635:intron 45.0%
GAGGGAAGATTCCATTGACA+TGG - chr4.1:23618987-23619006 MS.gene26635:CDS 45.0%
GCAGCTTACCAAAAGAGCTT+TGG + chr4.1:23618441-23618460 None:intergenic 45.0%
GGAGCAGAGATTGAATGAGA+AGG - chr4.1:23618646-23618665 MS.gene26635:CDS 45.0%
GGCAGTTCTCTTTCAATGTC+GGG - chr4.1:23618297-23618316 MS.gene26635:intron 45.0%
GGCATTACTTTCCAACCCTT+TGG + chr4.1:23619393-23619412 None:intergenic 45.0%
GGGAAGATTCCATTGACATG+GGG - chr4.1:23618989-23619008 MS.gene26635:CDS 45.0%
GGGTCAAAATTATGAGGAGC+AGG + chr4.1:23619453-23619472 None:intergenic 45.0%
TACGAGTGTGGTAATCTCCT+TGG + chr4.1:23617788-23617807 None:intergenic 45.0%
TGAGGCTGCAAGATTTGTGT+TGG - chr4.1:23617683-23617702 MS.gene26635:CDS 45.0%
TGGAATCTTCCCTCCATCAT+TGG + chr4.1:23618981-23619000 None:intergenic 45.0%
! CCTCTCTGTCTTTGGTAACT+TGG - chr4.1:23618322-23618341 MS.gene26635:intron 45.0%
!! GAGGTAGTGGGATATCAAAG+TGG - chr4.1:23619882-23619901 MS.gene26635:CDS 45.0%
!! GCTTTGGAGTATGATGTTCC+GGG + chr4.1:23618425-23618444 None:intergenic 45.0%
!! GGATTGGGAATGGGCTATAT+TGG + chr4.1:23619911-23619930 None:intergenic 45.0%
AATGGAGTGCACTCATGTCC+AGG - chr4.1:23619683-23619702 MS.gene26635:intron 50.0%
CTTGCTGAGGGATTGGGAAT+GGG + chr4.1:23619920-23619939 None:intergenic 50.0%
GAGTGCACTCCATTGCCAAA+TGG + chr4.1:23619677-23619696 None:intergenic 50.0%
GTAGACCTTGCTGAGGGATT+GGG + chr4.1:23619926-23619945 None:intergenic 50.0%
TGAGGAGCAGGGTAGAATTC+TGG + chr4.1:23619441-23619460 None:intergenic 50.0%
TTGTGGGTAGACCTTGCTGA+GGG + chr4.1:23619932-23619951 None:intergenic 50.0%
! CTGCACTGCAGTGCAACTTT+TGG - chr4.1:23618457-23618476 MS.gene26635:intron 50.0%
! TAGGGAAGCTGTGGTTGATG+TGG - chr4.1:23619231-23619250 MS.gene26635:CDS 50.0%
CCATTCCCAATCCCTCAGCA+AGG - chr4.1:23619918-23619937 MS.gene26635:CDS 55.0%
CCTTGCTGAGGGATTGGGAA+TGG + chr4.1:23619921-23619940 None:intergenic 55.0%
CGAGTTTCCGGATACGAGTG+TGG + chr4.1:23617800-23617819 None:intergenic 55.0%
CTTGTGGGTAGACCTTGCTG+AGG + chr4.1:23619933-23619952 None:intergenic 55.0%
GGTAGACCTTGCTGAGGGAT+TGG + chr4.1:23619927-23619946 None:intergenic 55.0%
GTCGGGATCCTCTCTGTCTT+TGG - chr4.1:23618314-23618333 MS.gene26635:intron 55.0%
TTTGGCAGGTGGGAGGTAGT+GGG - chr4.1:23619870-23619889 MS.gene26635:CDS 55.0%
GTTTGGCAGGTGGGAGGTAG+TGG - chr4.1:23619869-23619888 MS.gene26635:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 23617669 23619971 23617669 ID=MS.gene26635
chr4.1 mRNA 23617669 23619971 23617669 ID=MS.gene26635.t1;Parent=MS.gene26635
chr4.1 exon 23619693 23619971 23619693 ID=MS.gene26635.t1.exon1;Parent=MS.gene26635.t1
chr4.1 CDS 23619693 23619971 23619693 ID=cds.MS.gene26635.t1;Parent=MS.gene26635.t1
chr4.1 exon 23619189 23619338 23619189 ID=MS.gene26635.t1.exon2;Parent=MS.gene26635.t1
chr4.1 CDS 23619189 23619338 23619189 ID=cds.MS.gene26635.t1;Parent=MS.gene26635.t1
chr4.1 exon 23618796 23619044 23618796 ID=MS.gene26635.t1.exon3;Parent=MS.gene26635.t1
chr4.1 CDS 23618796 23619044 23618796 ID=cds.MS.gene26635.t1;Parent=MS.gene26635.t1
chr4.1 exon 23618598 23618687 23618598 ID=MS.gene26635.t1.exon4;Parent=MS.gene26635.t1
chr4.1 CDS 23618598 23618687 23618598 ID=cds.MS.gene26635.t1;Parent=MS.gene26635.t1
chr4.1 exon 23618378 23618456 23618378 ID=MS.gene26635.t1.exon5;Parent=MS.gene26635.t1
chr4.1 CDS 23618378 23618456 23618378 ID=cds.MS.gene26635.t1;Parent=MS.gene26635.t1
chr4.1 exon 23618155 23618261 23618155 ID=MS.gene26635.t1.exon6;Parent=MS.gene26635.t1
chr4.1 CDS 23618155 23618261 23618155 ID=cds.MS.gene26635.t1;Parent=MS.gene26635.t1
chr4.1 exon 23617875 23617993 23617875 ID=MS.gene26635.t1.exon7;Parent=MS.gene26635.t1
chr4.1 CDS 23617875 23617993 23617875 ID=cds.MS.gene26635.t1;Parent=MS.gene26635.t1
chr4.1 exon 23617669 23617762 23617669 ID=MS.gene26635.t1.exon8;Parent=MS.gene26635.t1
chr4.1 CDS 23617669 23617762 23617669 ID=cds.MS.gene26635.t1;Parent=MS.gene26635.t1
Gene Sequence

>MS.gene26635

ATGTTAACAAGTCCTGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTTAAGCCTACATATCCCAAAAGCAAAGAGAAGCTTATTGGTTCTTCTGCATTATTCTTTCACCAAGGAGATTACCACACTCGTATCCGGAAACTCGTACAAAACTCTCTTGCTCCTGAATCAATCAAGAAATTGATCCCTGATATTGAAAATGAAGTCATTTCCTCACTAGAATCCTGGGTTTTTATTGGACAAGTCATCAACGCTTTCCATGAAATGAAAAAGGTTTGTTTTGAAATTAAATTAATATAATAAAAGAATTATCTTGACAAATTTAAATCAACAAAAGTTGATGTATTTCCTTCAAAAAAAGTTGATGTATTAAGACAAAATTTTAGACGAAATACATAAATTTTTGTTGATTTAATTTTTTTTTTTTTATATATAGGATCGGAGGTAGTACGATATATAAACATATAAAGGTTATATTTTCTAGAAGCAACGATGAAATATATTGTCTTATTGGATACTGTTTGAATAGCGTTGAATTTTGTTTTCATTTGTCGGTCCTAATCATGAATTTATTGTCACTGGGTCCTTCTCCTTCATTATTGTTTGGTTTGGTTTGATTATTGGCAGTTCTCTTTCAATGTCGGGATCCTCTCTGTCTTTGGTAACTTGGAAGCCAATTATAGAGAACAGCTTAAGGAGAATTACTGCATAGTAGAGAAAGGTTACAATTCTTTCCCAAATAAGATACCCGGAACATCATACTCCAAAGCTCTTTTGGTAAGCTGCACTGCAGTGCAACTTTTGGTTTATATATGATTTTAGTAGTTCTAAATTTCGATCACTAACTGCAATTGCGGTCGCAATATAAAAGTTTTAGAATAATATAACTTGACTAAAAATTGGTTAAATTGTCTAAATTAGGCGAGGCGGCGAATTCAAGAGATTATAAGTGAGATAATTTGCAAGAGAAAGGAGCAGAGATTGAATGAGAAGGATCTATTAGGCCATTTGCTAAACTACAAGGATGAAAAAGGGAAAATGTTAAGTGATGAGGAAGTTGCTGATAATGTGATTGGAGTACTATTTGCAGCTCAAGATACTACAGCTAGTGTTCTTACTTGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGACGCCATAAAAGTAAGTGTTTTTGTCTCCATCATGGATTTCCTATTCCTTATTGGCCCTTAGTGTTGAAAATCAATATTCATGAATGAGTCAAATCATAATAAACTGTACATATTACAGGCTGAGCAGATGGCAGTATGTGATACCAATGATGGAGGGAAGATTCCATTGACATGGGGTCAGATAAAAAATATGCCACTTACTCATAAGGTATGGTATATAATATATATACTATATACTTTGCATGCATGGTAAATGCTATGCAAAAAAAAAAAAAAAAAAAAAATACTTCTTTTAATTTGAATGCAGCTTCATGAATACATTAAGTAGTAAATAACTTGTATTGTGTAGGTAATATTGGAAAGCCTAAGGATGTCAAGCATCATATCATTCACGTTTAGGGAAGCTGTGGTTGATGTGGTATACAAGGGTAAGAATTTTAGACGGATTAATCTTTTGTACATTTATAGGAAATTTCATTTTCAAAAGCTATTACTATTTATTTCATGATTAATTTGTCAAATGTTCTTTGATGCAACTATCAAGGATATTTAATACCAAAGGGTTGGAAAGTAATGCCACTGTTCAGAAACATCCATCATAATCCAGAATTCTACCCTGCTCCTCATAATTTTGACCCATCAAGATTTGAGGTATACTATTGCTATGCTTGACATTAACGACTTTGTCCACCGCCTAGTCATATATGTATATATATATATATATATATATATATATATATATATATATATATATATATAACAAAAAATAAAAAATTATTTATGCTTATGAATATATGGATTGATGGTTGCAGTTTGCTCCAAAGCCCAATACTTTTATGCCATTTGGCAATGGAGTGCACTCATGTCCAGGAAATGAGCTAGCCAAATTGAACATGTTGATTTTAATCCATCATCTAGTAACCAAATTTAGGTAAATTTAAATTTTGACTTCATTTTGTCAATTTTTTTCTTCCATATTTTATTCATAATGCAATATCAAGATCAGAGTGCTCATTTGGTTGTGTTCAATATTTGTTTGGCAGGTGGGAGGTAGTGGGATATCAAAGTGGAATCCAATATAGCCCATTCCCAATCCCTCAGCAAGGTCTACCCACAAGATTTTGGAGAATCAAATAG

Protein sequence

>MS.gene26635.t1

MLTSPEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGDYHTRIRKLVQNSLAPESIKKLIPDIENEVISSLESWVFIGQVINAFHEMKKFSFNVGILSVFGNLEANYREQLKENYCIVEKGYNSFPNKIPGTSYSKALLARRRIQEIISEIICKRKEQRLNEKDLLGHLLNYKDEKGKMLSDEEVADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLDAIKAEQMAVCDTNDGGKIPLTWGQIKNMPLTHKVILESLRMSSIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHNFDPSRFEFAPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVGYQSGIQYSPFPIPQQGLPTRFWRIK