Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28157.t1 | XP_003630119.1 | 98.1 | 209 | 4 | 0 | 1 | 209 | 1 | 209 | 3.10E-117 | 431 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28157.t1 | Q43463 | 79.0 | 205 | 42 | 1 | 6 | 209 | 2 | 206 | 2.7e-93 | 342.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28157.t1 | G7LBB5 | 98.1 | 209 | 4 | 0 | 1 | 209 | 1 | 209 | 2.2e-117 | 431.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene28157 | 0.801972 | 7.00E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene28157 | 0.807675 | 4.50E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene28157 | 0.823912 | 1.07E-53 | -1.69E-46 |
| MS.gene049910 | MS.gene28157 | 0.805176 | 1.51E-49 | -1.69E-46 |
| MS.gene049915 | MS.gene28157 | 0.800784 | 1.22E-48 | -1.69E-46 |
| MS.gene050128 | MS.gene28157 | 0.802662 | 5.04E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene28157 | 0.819481 | 1.14E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene28157 | 0.813423 | 2.58E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene28157 | 0.81134 | 7.35E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene28157 | 0.81579 | 7.72E-52 | -1.69E-46 |
| MS.gene050398 | MS.gene28157 | 0.81225 | 4.66E-51 | -1.69E-46 |
| MS.gene050516 | MS.gene28157 | 0.804061 | 2.59E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene28157 | -0.827374 | 1.62E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene28157 | 0.828846 | 7.17E-55 | -1.69E-46 |
| MS.gene050763 | MS.gene28157 | 0.80301 | 4.28E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene28157 | 0.819695 | 1.01E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene28157 | 0.825241 | 5.22E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene28157 | 0.809828 | 1.56E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene28157 | 0.809085 | 2.25E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene28157 | 0.831754 | 1.39E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene28157 | 0.84116 | 5.62E-58 | -1.69E-46 |
| MS.gene053928 | MS.gene28157 | 0.802838 | 4.64E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene28157 | 0.823547 | 1.31E-53 | -1.69E-46 |
| MS.gene054185 | MS.gene28157 | 0.820872 | 5.45E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene28157 | 0.811024 | 8.61E-51 | -1.69E-46 |
| MS.gene054983 | MS.gene28157 | 0.800921 | 1.15E-48 | -1.69E-46 |
| MS.gene055133 | MS.gene28157 | 0.804454 | 2.14E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene28157 | 0.80935 | 1.98E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene28157 | 0.802811 | 4.70E-49 | -1.69E-46 |
| MS.gene056447 | MS.gene28157 | 0.806317 | 8.72E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene28157 | 0.804761 | 1.85E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene28157 | 0.826112 | 3.24E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene28157 | 0.800826 | 1.20E-48 | -1.69E-46 |
| MS.gene057469 | MS.gene28157 | 0.805474 | 1.31E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene28157 | 0.827735 | 1.33E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene28157 | 0.826961 | 2.03E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene28157 | 0.853007 | 3.18E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene28157 | 0.804802 | 1.81E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene28157 | 0.805652 | 1.20E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene28157 | 0.80589 | 1.07E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene28157 | 0.83277 | 7.82E-56 | -1.69E-46 |
| MS.gene059294 | MS.gene28157 | 0.803147 | 4.00E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene28157 | 0.801442 | 8.99E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene28157 | 0.846825 | 1.70E-59 | -1.69E-46 |
| MS.gene059894 | MS.gene28157 | 0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene28157 | 0.806005 | 1.01E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene28157 | 0.830476 | 2.87E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28157.t1 | MTR_8g092020 | 98.086 | 209 | 4 | 0 | 1 | 209 | 1 | 209 | 6.16e-157 | 432 |
| MS.gene28157.t1 | MTR_1g097420 | 74.757 | 206 | 50 | 1 | 6 | 209 | 2 | 207 | 2.02e-115 | 327 |
| MS.gene28157.t1 | MTR_1g097420 | 66.094 | 233 | 50 | 2 | 6 | 209 | 2 | 234 | 3.51e-109 | 313 |
| MS.gene28157.t1 | MTR_2g101890 | 65.700 | 207 | 71 | 0 | 3 | 209 | 1 | 207 | 2.26e-102 | 294 |
| MS.gene28157.t1 | MTR_4g012940 | 65.686 | 204 | 70 | 0 | 6 | 209 | 2 | 205 | 1.26e-101 | 292 |
| MS.gene28157.t1 | MTR_4g069850 | 67.488 | 203 | 65 | 1 | 8 | 209 | 4 | 206 | 1.29e-100 | 290 |
| MS.gene28157.t1 | MTR_6g039490 | 69.652 | 201 | 61 | 0 | 9 | 209 | 5 | 205 | 7.57e-100 | 288 |
| MS.gene28157.t1 | MTR_1452s0010 | 75.789 | 95 | 23 | 0 | 32 | 126 | 1 | 95 | 4.04e-49 | 155 |
| MS.gene28157.t1 | MTR_4g079350 | 42.593 | 162 | 86 | 3 | 12 | 173 | 13 | 167 | 1.94e-38 | 132 |
| MS.gene28157.t1 | MTR_5g013900 | 37.019 | 208 | 108 | 6 | 14 | 209 | 11 | 207 | 2.45e-38 | 132 |
| MS.gene28157.t1 | MTR_1g052475 | 42.424 | 165 | 88 | 3 | 12 | 176 | 15 | 172 | 2.95e-38 | 132 |
| MS.gene28157.t1 | MTR_3g064390 | 36.598 | 194 | 116 | 4 | 14 | 207 | 12 | 198 | 6.01e-38 | 130 |
| MS.gene28157.t1 | MTR_2g014990 | 41.975 | 162 | 87 | 3 | 12 | 173 | 13 | 167 | 1.15e-37 | 130 |
| MS.gene28157.t1 | MTR_4g088090 | 41.975 | 162 | 87 | 3 | 12 | 173 | 13 | 167 | 1.53e-37 | 130 |
| MS.gene28157.t1 | MTR_7g405790 | 41.317 | 167 | 91 | 3 | 12 | 178 | 15 | 174 | 1.54e-37 | 130 |
| MS.gene28157.t1 | MTR_8g036220 | 41.718 | 163 | 88 | 3 | 12 | 174 | 16 | 171 | 1.70e-37 | 130 |
| MS.gene28157.t1 | MTR_2g096550 | 40.120 | 167 | 95 | 3 | 12 | 178 | 15 | 176 | 4.91e-37 | 128 |
| MS.gene28157.t1 | MTR_5g076590 | 36.082 | 194 | 117 | 4 | 14 | 207 | 12 | 198 | 1.33e-36 | 127 |
| MS.gene28157.t1 | MTR_0262s0050 | 41.212 | 165 | 90 | 3 | 12 | 176 | 15 | 172 | 2.27e-36 | 127 |
| MS.gene28157.t1 | MTR_8g089985 | 37.791 | 172 | 100 | 3 | 5 | 176 | 10 | 174 | 2.50e-36 | 127 |
| MS.gene28157.t1 | MTR_1686s0010 | 63.855 | 83 | 30 | 0 | 32 | 114 | 1 | 83 | 3.90e-36 | 122 |
| MS.gene28157.t1 | MTR_3g087160 | 33.498 | 203 | 121 | 4 | 14 | 209 | 11 | 206 | 4.95e-36 | 125 |
| MS.gene28157.t1 | MTR_1g068730 | 39.881 | 168 | 93 | 3 | 12 | 178 | 15 | 175 | 5.15e-36 | 126 |
| MS.gene28157.t1 | MTR_2g090865 | 40.606 | 165 | 91 | 3 | 12 | 176 | 11 | 168 | 5.41e-36 | 126 |
| MS.gene28157.t1 | MTR_1g115325 | 35.437 | 206 | 116 | 4 | 12 | 207 | 15 | 213 | 5.41e-36 | 126 |
| MS.gene28157.t1 | MTR_8g090215 | 33.824 | 204 | 120 | 4 | 14 | 209 | 11 | 207 | 6.23e-36 | 125 |
| MS.gene28157.t1 | MTR_6g021790 | 38.857 | 175 | 100 | 3 | 12 | 186 | 6 | 173 | 6.43e-36 | 125 |
| MS.gene28157.t1 | MTR_2g005510 | 40.123 | 162 | 90 | 3 | 12 | 173 | 15 | 169 | 7.40e-36 | 125 |
| MS.gene28157.t1 | MTR_4g064897 | 36.471 | 170 | 101 | 2 | 7 | 176 | 7 | 169 | 7.63e-36 | 125 |
| MS.gene28157.t1 | MTR_2g075950 | 34.848 | 198 | 112 | 4 | 12 | 209 | 13 | 193 | 1.58e-35 | 125 |
| MS.gene28157.t1 | MTR_1g068740 | 39.286 | 168 | 94 | 3 | 12 | 178 | 15 | 175 | 1.77e-35 | 124 |
| MS.gene28157.t1 | MTR_7g100020 | 38.202 | 178 | 102 | 3 | 12 | 188 | 15 | 185 | 2.37e-35 | 124 |
| MS.gene28157.t1 | MTR_3g086980 | 38.182 | 165 | 95 | 3 | 12 | 176 | 16 | 173 | 2.49e-35 | 124 |
| MS.gene28157.t1 | MTR_4g098950 | 35.096 | 208 | 111 | 7 | 14 | 209 | 11 | 206 | 6.41e-35 | 123 |
| MS.gene28157.t1 | MTR_8g103550 | 37.356 | 174 | 102 | 4 | 5 | 178 | 2 | 168 | 1.32e-34 | 122 |
| MS.gene28157.t1 | MTR_3g069510 | 36.364 | 165 | 98 | 2 | 12 | 176 | 12 | 169 | 2.52e-34 | 121 |
| MS.gene28157.t1 | MTR_7g051940 | 37.725 | 167 | 97 | 3 | 12 | 178 | 13 | 172 | 4.83e-34 | 120 |
| MS.gene28157.t1 | MTR_8g006970 | 38.554 | 166 | 95 | 3 | 12 | 177 | 8 | 166 | 5.24e-34 | 120 |
| MS.gene28157.t1 | MTR_2g027660 | 37.952 | 166 | 96 | 2 | 12 | 177 | 6 | 164 | 6.76e-34 | 120 |
| MS.gene28157.t1 | MTR_8g006970 | 38.554 | 166 | 95 | 3 | 12 | 177 | 22 | 180 | 1.02e-33 | 120 |
| MS.gene28157.t1 | MTR_2g083860 | 38.889 | 162 | 92 | 2 | 12 | 173 | 13 | 167 | 1.63e-33 | 119 |
| MS.gene28157.t1 | MTR_7g081700 | 37.952 | 166 | 96 | 3 | 12 | 177 | 8 | 166 | 4.73e-33 | 118 |
| MS.gene28157.t1 | MTR_1g078200 | 37.725 | 167 | 97 | 2 | 12 | 178 | 14 | 173 | 9.65e-33 | 117 |
| MS.gene28157.t1 | MTR_8g031680 | 37.427 | 171 | 100 | 2 | 13 | 183 | 7 | 170 | 1.34e-32 | 117 |
| MS.gene28157.t1 | MTR_8g027220 | 34.579 | 214 | 117 | 6 | 12 | 209 | 26 | 232 | 8.05e-32 | 115 |
| MS.gene28157.t1 | MTR_2g005500 | 36.416 | 173 | 103 | 3 | 5 | 177 | 2 | 167 | 9.80e-32 | 114 |
| MS.gene28157.t1 | MTR_4g063160 | 36.232 | 207 | 114 | 6 | 12 | 207 | 15 | 214 | 9.89e-32 | 115 |
| MS.gene28157.t1 | MTR_1663s0010 | 66.667 | 75 | 25 | 0 | 114 | 188 | 1 | 75 | 1.03e-31 | 110 |
| MS.gene28157.t1 | MTR_6g079550 | 39.264 | 163 | 92 | 4 | 12 | 174 | 12 | 167 | 1.20e-31 | 114 |
| MS.gene28157.t1 | MTR_8g031870 | 35.542 | 166 | 100 | 2 | 13 | 178 | 7 | 165 | 5.88e-31 | 112 |
| MS.gene28157.t1 | MTR_2g102060 | 35.758 | 165 | 99 | 2 | 14 | 178 | 12 | 169 | 1.16e-29 | 109 |
| MS.gene28157.t1 | MTR_8g107070 | 35.979 | 189 | 109 | 5 | 12 | 198 | 14 | 192 | 1.37e-29 | 110 |
| MS.gene28157.t1 | MTR_7g117910 | 38.514 | 148 | 83 | 3 | 12 | 159 | 20 | 159 | 2.85e-29 | 108 |
| MS.gene28157.t1 | MTR_3g064390 | 41.860 | 129 | 69 | 3 | 14 | 142 | 12 | 134 | 1.60e-28 | 105 |
| MS.gene28157.t1 | MTR_1g094220 | 34.503 | 171 | 104 | 5 | 9 | 178 | 28 | 191 | 1.10e-27 | 104 |
| MS.gene28157.t1 | MTR_8g031660 | 32.584 | 178 | 113 | 2 | 12 | 189 | 6 | 176 | 1.34e-27 | 104 |
| MS.gene28157.t1 | MTR_1g068730 | 41.985 | 131 | 68 | 3 | 12 | 141 | 15 | 138 | 1.97e-27 | 102 |
| MS.gene28157.t1 | MTR_1g068740 | 41.985 | 131 | 68 | 3 | 12 | 141 | 15 | 138 | 2.54e-27 | 103 |
| MS.gene28157.t1 | MTR_8g031830 | 32.275 | 189 | 115 | 6 | 13 | 201 | 7 | 182 | 8.23e-27 | 102 |
| MS.gene28157.t1 | MTR_7g103070 | 38.509 | 161 | 92 | 5 | 14 | 173 | 18 | 172 | 1.00e-26 | 102 |
| MS.gene28157.t1 | MTR_1g029450 | 39.634 | 164 | 89 | 6 | 12 | 173 | 17 | 172 | 1.12e-26 | 102 |
| MS.gene28157.t1 | MTR_1g094220 | 34.337 | 166 | 101 | 5 | 9 | 173 | 28 | 186 | 1.29e-26 | 101 |
| MS.gene28157.t1 | MTR_8g093740 | 38.068 | 176 | 98 | 7 | 1 | 173 | 1 | 168 | 1.65e-26 | 101 |
| MS.gene28157.t1 | MTR_1g094220 | 34.337 | 166 | 101 | 5 | 9 | 173 | 28 | 186 | 2.56e-26 | 100 |
| MS.gene28157.t1 | MTR_3g107717 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 2.94e-26 | 100 |
| MS.gene28157.t1 | MTR_3g107707 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 2.97e-26 | 100 |
| MS.gene28157.t1 | MTR_4g099470 | 37.956 | 137 | 78 | 2 | 41 | 177 | 13 | 142 | 3.01e-26 | 99.8 |
| MS.gene28157.t1 | MTR_3g107713 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 3.37e-26 | 100 |
| MS.gene28157.t1 | MTR_1g094220 | 34.337 | 166 | 101 | 5 | 9 | 173 | 28 | 186 | 4.27e-26 | 100 |
| MS.gene28157.t1 | MTR_3g096350 | 37.143 | 175 | 100 | 6 | 1 | 173 | 1 | 167 | 8.57e-26 | 99.4 |
| MS.gene28157.t1 | MTR_1g062760 | 34.653 | 202 | 120 | 6 | 13 | 209 | 15 | 209 | 7.36e-25 | 97.1 |
| MS.gene28157.t1 | MTR_1812s0010 | 64.062 | 64 | 23 | 0 | 123 | 186 | 10 | 73 | 1.41e-24 | 92.4 |
| MS.gene28157.t1 | MTR_1g090717 | 35.821 | 201 | 117 | 6 | 13 | 207 | 16 | 210 | 9.44e-24 | 94.4 |
| MS.gene28157.t1 | MTR_3g096350 | 39.552 | 134 | 74 | 4 | 1 | 132 | 1 | 129 | 6.33e-23 | 90.5 |
| MS.gene28157.t1 | MTR_3g096350 | 39.552 | 134 | 74 | 4 | 1 | 132 | 1 | 129 | 6.59e-23 | 90.5 |
| MS.gene28157.t1 | MTR_4g113620 | 28.655 | 171 | 103 | 4 | 13 | 183 | 14 | 165 | 6.43e-20 | 84.3 |
| MS.gene28157.t1 | MTR_8g093740 | 38.346 | 133 | 73 | 5 | 43 | 173 | 10 | 135 | 1.28e-18 | 79.7 |
| MS.gene28157.t1 | MTR_4g088055 | 29.775 | 178 | 110 | 4 | 12 | 180 | 6 | 177 | 2.59e-18 | 79.7 |
| MS.gene28157.t1 | MTR_5g036990 | 55.714 | 70 | 30 | 1 | 43 | 111 | 32 | 101 | 3.29e-18 | 77.4 |
| MS.gene28157.t1 | MTR_6g087980 | 28.986 | 207 | 123 | 6 | 12 | 208 | 6 | 198 | 5.98e-18 | 79.0 |
| MS.gene28157.t1 | MTR_2g090875 | 29.944 | 177 | 109 | 4 | 12 | 179 | 6 | 176 | 6.84e-18 | 78.6 |
| MS.gene28157.t1 | MTR_5g022600 | 28.824 | 170 | 108 | 3 | 12 | 173 | 6 | 170 | 5.54e-16 | 73.6 |
| MS.gene28157.t1 | MTR_4g073250 | 28.249 | 177 | 112 | 4 | 12 | 179 | 6 | 176 | 6.15e-16 | 73.2 |
| MS.gene28157.t1 | MTR_7g103070 | 38.843 | 121 | 67 | 5 | 54 | 173 | 2 | 116 | 8.03e-16 | 72.0 |
| MS.gene28157.t1 | MTR_3g078260 | 29.825 | 171 | 105 | 4 | 12 | 173 | 8 | 172 | 1.85e-15 | 72.4 |
| MS.gene28157.t1 | MTR_8g075240 | 29.412 | 170 | 107 | 4 | 12 | 173 | 6 | 170 | 3.08e-15 | 71.2 |
| MS.gene28157.t1 | MTR_2g093510 | 65.306 | 49 | 17 | 0 | 141 | 189 | 779 | 827 | 3.74e-15 | 73.9 |
| MS.gene28157.t1 | MTR_3g078260 | 31.405 | 121 | 76 | 3 | 12 | 131 | 8 | 122 | 1.94e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28157.t1 | AT1G22740 | 75.490 | 204 | 48 | 1 | 6 | 209 | 2 | 203 | 5.31e-113 | 321 |
| MS.gene28157.t1 | AT4G09720 | 71.429 | 203 | 57 | 1 | 8 | 209 | 4 | 206 | 4.09e-110 | 314 |
| MS.gene28157.t1 | AT4G09720 | 70.192 | 208 | 56 | 3 | 8 | 209 | 4 | 211 | 1.27e-106 | 305 |
| MS.gene28157.t1 | AT4G09720 | 67.757 | 214 | 57 | 2 | 8 | 209 | 4 | 217 | 2.12e-106 | 305 |
| MS.gene28157.t1 | AT2G21880 | 70.000 | 210 | 57 | 2 | 6 | 209 | 3 | 212 | 6.38e-103 | 296 |
| MS.gene28157.t1 | AT1G52280 | 67.317 | 205 | 66 | 1 | 6 | 209 | 2 | 206 | 9.58e-103 | 295 |
| MS.gene28157.t1 | AT3G16100 | 66.341 | 205 | 68 | 1 | 6 | 209 | 2 | 206 | 1.73e-101 | 292 |
| MS.gene28157.t1 | AT3G18820 | 67.488 | 203 | 65 | 1 | 8 | 209 | 4 | 206 | 3.67e-100 | 289 |
| MS.gene28157.t1 | AT1G49300 | 66.176 | 204 | 68 | 1 | 7 | 209 | 3 | 206 | 1.13e-99 | 288 |
| MS.gene28157.t1 | AT1G49300 | 66.176 | 204 | 68 | 1 | 7 | 209 | 3 | 206 | 1.13e-99 | 288 |
| MS.gene28157.t1 | AT2G21880 | 66.190 | 210 | 57 | 3 | 6 | 209 | 3 | 204 | 4.12e-93 | 271 |
| MS.gene28157.t1 | AT2G21880 | 67.914 | 187 | 54 | 2 | 29 | 209 | 1 | 187 | 2.06e-88 | 258 |
| MS.gene28157.t1 | AT2G21880 | 67.914 | 187 | 54 | 2 | 29 | 209 | 1 | 187 | 2.06e-88 | 258 |
| MS.gene28157.t1 | AT4G09720 | 67.836 | 171 | 54 | 1 | 40 | 209 | 2 | 172 | 2.78e-87 | 255 |
| MS.gene28157.t1 | AT4G09720 | 67.836 | 171 | 54 | 1 | 40 | 209 | 2 | 172 | 2.78e-87 | 255 |
| MS.gene28157.t1 | AT4G09720 | 67.836 | 171 | 54 | 1 | 40 | 209 | 2 | 172 | 2.78e-87 | 255 |
| MS.gene28157.t1 | AT5G39620 | 53.695 | 203 | 92 | 1 | 9 | 209 | 2 | 204 | 8.55e-77 | 229 |
| MS.gene28157.t1 | AT3G12160 | 43.030 | 165 | 87 | 3 | 12 | 176 | 15 | 172 | 3.76e-39 | 134 |
| MS.gene28157.t1 | AT3G15060 | 41.111 | 180 | 95 | 4 | 12 | 187 | 13 | 185 | 1.39e-38 | 132 |
| MS.gene28157.t1 | AT5G60860 | 41.975 | 162 | 87 | 3 | 12 | 173 | 13 | 167 | 2.90e-38 | 132 |
| MS.gene28157.t1 | AT1G28550 | 41.975 | 162 | 87 | 3 | 12 | 173 | 13 | 167 | 5.04e-38 | 131 |
| MS.gene28157.t1 | AT2G33870 | 40.606 | 165 | 91 | 3 | 12 | 176 | 13 | 170 | 8.46e-38 | 130 |
| MS.gene28157.t1 | AT2G44610 | 36.364 | 209 | 109 | 6 | 14 | 209 | 11 | 208 | 1.74e-37 | 129 |
| MS.gene28157.t1 | AT5G10260 | 35.096 | 208 | 112 | 5 | 14 | 209 | 11 | 207 | 3.56e-37 | 129 |
| MS.gene28157.t1 | AT5G45750 | 39.655 | 174 | 95 | 3 | 12 | 185 | 13 | 176 | 7.21e-37 | 128 |
| MS.gene28157.t1 | AT5G47960 | 40.606 | 165 | 91 | 3 | 12 | 176 | 15 | 172 | 1.05e-36 | 128 |
| MS.gene28157.t1 | AT5G59840 | 39.326 | 178 | 100 | 3 | 12 | 188 | 15 | 185 | 1.10e-36 | 127 |
| MS.gene28157.t1 | AT3G53610 | 37.853 | 177 | 104 | 2 | 12 | 188 | 15 | 185 | 1.33e-36 | 127 |
| MS.gene28157.t1 | AT3G53610 | 37.853 | 177 | 104 | 2 | 12 | 188 | 15 | 185 | 1.33e-36 | 127 |
| MS.gene28157.t1 | AT3G53610 | 37.853 | 177 | 104 | 2 | 12 | 188 | 15 | 185 | 1.33e-36 | 127 |
| MS.gene28157.t1 | AT4G18430 | 38.788 | 165 | 94 | 3 | 12 | 176 | 13 | 170 | 3.27e-36 | 126 |
| MS.gene28157.t1 | AT1G05810 | 38.798 | 183 | 96 | 3 | 8 | 190 | 8 | 174 | 6.47e-36 | 125 |
| MS.gene28157.t1 | AT1G09630 | 38.788 | 165 | 94 | 3 | 12 | 176 | 12 | 169 | 7.32e-36 | 125 |
| MS.gene28157.t1 | AT2G43130 | 38.922 | 167 | 95 | 3 | 12 | 178 | 12 | 171 | 7.53e-36 | 125 |
| MS.gene28157.t1 | AT1G73640 | 38.043 | 184 | 98 | 5 | 12 | 186 | 13 | 189 | 1.08e-35 | 125 |
| MS.gene28157.t1 | AT5G59150 | 38.788 | 165 | 94 | 3 | 12 | 176 | 12 | 169 | 1.20e-35 | 125 |
| MS.gene28157.t1 | AT1G05810 | 38.798 | 183 | 96 | 3 | 8 | 190 | 54 | 220 | 1.78e-35 | 126 |
| MS.gene28157.t1 | AT5G45130 | 38.636 | 176 | 101 | 4 | 3 | 178 | 1 | 169 | 2.96e-35 | 124 |
| MS.gene28157.t1 | AT2G31680 | 38.323 | 167 | 96 | 2 | 12 | 178 | 12 | 171 | 4.90e-35 | 124 |
| MS.gene28157.t1 | AT3G46060 | 37.640 | 178 | 103 | 3 | 12 | 188 | 15 | 185 | 5.68e-35 | 123 |
| MS.gene28157.t1 | AT3G46060 | 37.640 | 178 | 103 | 3 | 12 | 188 | 15 | 185 | 5.68e-35 | 123 |
| MS.gene28157.t1 | AT3G46060 | 37.640 | 178 | 103 | 3 | 12 | 188 | 15 | 185 | 5.68e-35 | 123 |
| MS.gene28157.t1 | AT5G64990 | 37.321 | 209 | 107 | 8 | 14 | 209 | 9 | 206 | 8.23e-35 | 122 |
| MS.gene28157.t1 | AT5G65270 | 39.394 | 165 | 93 | 3 | 12 | 176 | 17 | 174 | 8.36e-35 | 123 |
| MS.gene28157.t1 | AT4G18800 | 38.889 | 162 | 92 | 2 | 12 | 173 | 13 | 167 | 1.05e-34 | 122 |
| MS.gene28157.t1 | AT2G22290 | 33.981 | 206 | 117 | 5 | 14 | 209 | 11 | 207 | 2.11e-34 | 121 |
| MS.gene28157.t1 | AT1G07410 | 35.882 | 170 | 102 | 3 | 7 | 176 | 7 | 169 | 2.79e-34 | 121 |
| MS.gene28157.t1 | AT4G35860 | 37.143 | 175 | 103 | 4 | 12 | 186 | 6 | 173 | 2.87e-34 | 121 |
| MS.gene28157.t1 | AT1G18200 | 39.394 | 165 | 93 | 4 | 12 | 176 | 13 | 170 | 4.32e-34 | 121 |
| MS.gene28157.t1 | AT1G16920 | 40.123 | 162 | 90 | 3 | 12 | 173 | 13 | 167 | 7.24e-34 | 120 |
| MS.gene28157.t1 | AT1G06400 | 38.889 | 162 | 92 | 2 | 12 | 173 | 13 | 167 | 7.48e-34 | 120 |
| MS.gene28157.t1 | AT4G17170 | 37.952 | 166 | 96 | 3 | 12 | 177 | 6 | 164 | 9.67e-34 | 120 |
| MS.gene28157.t1 | AT3G09900 | 36.683 | 199 | 118 | 3 | 12 | 208 | 15 | 207 | 9.96e-34 | 120 |
| MS.gene28157.t1 | AT4G19640 | 36.932 | 176 | 104 | 4 | 3 | 178 | 1 | 169 | 1.01e-33 | 119 |
| MS.gene28157.t1 | AT4G39990 | 37.654 | 162 | 94 | 3 | 12 | 173 | 17 | 171 | 1.04e-33 | 120 |
| MS.gene28157.t1 | AT4G39890 | 37.870 | 169 | 91 | 4 | 13 | 177 | 10 | 168 | 1.13e-33 | 120 |
| MS.gene28157.t1 | AT3G46830 | 36.364 | 165 | 98 | 3 | 12 | 176 | 12 | 169 | 1.66e-33 | 119 |
| MS.gene28157.t1 | AT3G46830 | 36.364 | 165 | 98 | 3 | 12 | 176 | 12 | 169 | 1.66e-33 | 119 |
| MS.gene28157.t1 | AT5G45130 | 39.264 | 163 | 92 | 4 | 16 | 178 | 22 | 177 | 6.66e-33 | 117 |
| MS.gene28157.t1 | AT4G17160 | 34.314 | 204 | 118 | 5 | 13 | 207 | 7 | 203 | 6.93e-33 | 117 |
| MS.gene28157.t1 | AT1G01200 | 38.650 | 163 | 94 | 3 | 12 | 174 | 28 | 184 | 6.94e-33 | 118 |
| MS.gene28157.t1 | AT1G02130 | 36.257 | 171 | 102 | 3 | 12 | 182 | 8 | 171 | 1.00e-32 | 117 |
| MS.gene28157.t1 | AT5G03520 | 38.542 | 192 | 100 | 5 | 12 | 202 | 15 | 189 | 1.09e-32 | 117 |
| MS.gene28157.t1 | AT3G07410 | 38.323 | 167 | 96 | 2 | 12 | 178 | 12 | 171 | 1.74e-32 | 117 |
| MS.gene28157.t1 | AT4G17530 | 36.970 | 165 | 97 | 2 | 12 | 176 | 8 | 165 | 1.90e-32 | 116 |
| MS.gene28157.t1 | AT5G47200 | 36.970 | 165 | 97 | 2 | 12 | 176 | 8 | 165 | 3.38e-32 | 115 |
| MS.gene28157.t1 | AT5G64990 | 36.111 | 216 | 107 | 9 | 14 | 209 | 9 | 213 | 3.99e-32 | 116 |
| MS.gene28157.t1 | AT3G11730 | 37.952 | 166 | 96 | 3 | 12 | 177 | 8 | 166 | 5.74e-32 | 115 |
| MS.gene28157.t1 | AT5G47520 | 35.329 | 167 | 101 | 3 | 12 | 178 | 14 | 173 | 1.33e-30 | 112 |
| MS.gene28157.t1 | AT4G19640 | 38.462 | 143 | 82 | 3 | 3 | 145 | 1 | 137 | 9.28e-29 | 105 |
| MS.gene28157.t1 | AT3G54840 | 35.714 | 168 | 100 | 5 | 9 | 175 | 30 | 190 | 1.74e-28 | 106 |
| MS.gene28157.t1 | AT4G19640 | 33.708 | 178 | 108 | 6 | 14 | 191 | 12 | 179 | 4.18e-28 | 105 |
| MS.gene28157.t1 | AT3G54840 | 35.088 | 171 | 103 | 5 | 9 | 178 | 30 | 193 | 7.83e-28 | 104 |
| MS.gene28157.t1 | AT3G54840 | 35.152 | 165 | 99 | 5 | 15 | 178 | 2 | 159 | 3.87e-27 | 102 |
| MS.gene28157.t1 | AT1G43890 | 39.634 | 164 | 89 | 6 | 12 | 173 | 13 | 168 | 5.14e-27 | 102 |
| MS.gene28157.t1 | AT1G43890 | 39.634 | 164 | 89 | 6 | 12 | 173 | 13 | 168 | 5.14e-27 | 102 |
| MS.gene28157.t1 | AT1G43890 | 39.634 | 164 | 89 | 6 | 12 | 173 | 13 | 168 | 5.14e-27 | 102 |
| MS.gene28157.t1 | AT5G03530 | 34.826 | 201 | 119 | 6 | 14 | 209 | 15 | 208 | 9.28e-27 | 102 |
| MS.gene28157.t1 | AT5G03530 | 34.826 | 201 | 119 | 6 | 14 | 209 | 15 | 208 | 9.28e-27 | 102 |
| MS.gene28157.t1 | AT5G20010 | 30.688 | 189 | 115 | 5 | 13 | 201 | 14 | 186 | 2.65e-26 | 101 |
| MS.gene28157.t1 | AT5G55190 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 3.25e-26 | 100 |
| MS.gene28157.t1 | AT5G20020 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 3.65e-26 | 100 |
| MS.gene28157.t1 | AT5G03520 | 38.462 | 156 | 78 | 5 | 48 | 202 | 41 | 179 | 2.91e-25 | 98.2 |
| MS.gene28157.t1 | AT5G55080 | 28.994 | 169 | 104 | 4 | 13 | 178 | 14 | 169 | 2.94e-23 | 93.2 |
| MS.gene28157.t1 | AT4G35860 | 36.090 | 133 | 78 | 4 | 54 | 186 | 2 | 127 | 7.64e-22 | 88.2 |
| MS.gene28157.t1 | AT5G59150 | 38.017 | 121 | 68 | 3 | 56 | 176 | 5 | 118 | 2.42e-20 | 84.3 |
| MS.gene28157.t1 | AT3G09910 | 35.185 | 162 | 97 | 6 | 13 | 173 | 14 | 168 | 3.54e-19 | 82.0 |
| MS.gene28157.t1 | AT3G09910 | 35.185 | 162 | 97 | 6 | 13 | 173 | 14 | 168 | 3.54e-19 | 82.0 |
| MS.gene28157.t1 | AT3G09910 | 35.185 | 162 | 97 | 6 | 13 | 173 | 14 | 168 | 3.54e-19 | 82.0 |
| MS.gene28157.t1 | AT3G09910 | 34.286 | 175 | 107 | 5 | 13 | 186 | 14 | 181 | 4.13e-19 | 81.6 |
| MS.gene28157.t1 | AT3G09910 | 34.286 | 175 | 107 | 5 | 13 | 186 | 14 | 181 | 4.13e-19 | 81.6 |
| MS.gene28157.t1 | AT4G28950 | 28.922 | 204 | 126 | 6 | 12 | 208 | 6 | 197 | 1.80e-18 | 80.5 |
| MS.gene28157.t1 | AT5G45970 | 29.944 | 177 | 111 | 4 | 12 | 180 | 6 | 177 | 1.91e-18 | 80.1 |
| MS.gene28157.t1 | AT2G44690 | 29.825 | 171 | 105 | 4 | 12 | 173 | 18 | 182 | 4.28e-17 | 76.6 |
| MS.gene28157.t1 | AT1G20090 | 28.652 | 178 | 112 | 4 | 12 | 180 | 5 | 176 | 1.11e-16 | 75.1 |
| MS.gene28157.t1 | AT1G75840 | 28.652 | 178 | 112 | 4 | 12 | 180 | 6 | 177 | 1.64e-16 | 74.7 |
| MS.gene28157.t1 | AT3G51300 | 30.000 | 170 | 106 | 3 | 12 | 173 | 6 | 170 | 1.94e-16 | 74.7 |
| MS.gene28157.t1 | AT2G17800 | 30.000 | 170 | 106 | 3 | 12 | 173 | 6 | 170 | 2.48e-16 | 74.3 |
| MS.gene28157.t1 | AT2G17800 | 30.000 | 170 | 106 | 3 | 12 | 173 | 6 | 170 | 2.48e-16 | 74.3 |
| MS.gene28157.t1 | AT4G35950 | 30.000 | 170 | 106 | 3 | 12 | 173 | 6 | 170 | 3.15e-16 | 73.9 |
| MS.gene28157.t1 | AT4G35020 | 27.684 | 177 | 113 | 4 | 12 | 179 | 6 | 176 | 1.16e-15 | 72.8 |
| MS.gene28157.t1 | AT4G35020 | 27.684 | 177 | 113 | 4 | 12 | 179 | 6 | 176 | 1.16e-15 | 72.8 |
| MS.gene28157.t1 | AT4G35020 | 27.684 | 177 | 113 | 4 | 12 | 179 | 6 | 176 | 1.16e-15 | 72.8 |
| MS.gene28157.t1 | AT3G48040 | 29.775 | 178 | 110 | 4 | 12 | 180 | 8 | 179 | 1.53e-15 | 72.4 |
| MS.gene28157.t1 | AT5G62880 | 29.825 | 171 | 105 | 4 | 12 | 173 | 8 | 172 | 3.25e-15 | 71.6 |
| MS.gene28157.t1 | AT3G48040 | 29.444 | 180 | 110 | 5 | 12 | 182 | 8 | 179 | 6.91e-15 | 70.1 |
| MS.gene28157.t1 | AT5G62880 | 29.480 | 173 | 107 | 4 | 12 | 175 | 8 | 174 | 1.02e-14 | 70.1 |
| MS.gene28157.t1 | AT4G35020 | 29.752 | 121 | 78 | 3 | 12 | 131 | 6 | 120 | 2.37e-12 | 62.4 |
| MS.gene28157.t1 | AT4G35020 | 29.752 | 121 | 78 | 3 | 12 | 131 | 6 | 120 | 2.37e-12 | 62.4 |
Find 45 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCAGAGGTTTCAAAATA+TGG | 0.212498 | 4.4:+9691880 | None:intergenic |
| CTAGGGAATGGTGTGCTTCT+AGG | 0.247665 | 4.4:-9691912 | MS.gene28157:CDS |
| GCATTTCCCTTTGTATTACT+TGG | 0.328430 | 4.4:-9692096 | MS.gene28157:CDS |
| AGGGGCAGATTGTTGTGTTT+TGG | 0.341202 | 4.4:-9692673 | MS.gene28157:CDS |
| GTCATTGTCCTTGGAGATAG+TGG | 0.363454 | 4.4:-9693583 | MS.gene28157:CDS |
| TGATAAACTCGTAACCTTGC+AGG | 0.369262 | 4.4:-9692861 | MS.gene28157:intron |
| CAACAGTATAAAGCCACAAT+TGG | 0.380292 | 4.4:-9692917 | MS.gene28157:CDS |
| CATTTGATACATTAAACAAT+TGG | 0.385874 | 4.4:-9692626 | MS.gene28157:CDS |
| TAGATGGTGGAAACAGTAGA+AGG | 0.386136 | 4.4:-9692059 | MS.gene28157:CDS |
| AAAATGCAGCTCCAAGACTA+TGG | 0.389043 | 4.4:+9692700 | None:intergenic |
| TTGCTTAAGGTCATTGTCCT+TGG | 0.394981 | 4.4:-9693592 | MS.gene28157:CDS |
| AACAGTATAAAGCCACAATT+GGG | 0.408620 | 4.4:-9692916 | MS.gene28157:CDS |
| TAGGGAATGGTGTGCTTCTA+GGG | 0.415556 | 4.4:-9691911 | MS.gene28157:CDS |
| CAGAAAGAGAACTTTGCTTA+AGG | 0.420667 | 4.4:-9693605 | MS.gene28157:CDS |
| CAATTGTGGCTTTATACTGT+TGG | 0.421726 | 4.4:+9692918 | None:intergenic |
| CTTTGTATTACTTGGGAACA+AGG | 0.440726 | 4.4:-9692088 | MS.gene28157:CDS |
| CTTCGTTGTTCTGCTTCTGA+AGG | 0.452987 | 4.4:+9691643 | None:intergenic |
| TTCGTTGTTCTGCTTCTGAA+GGG | 0.456355 | 4.4:+9691644 | None:intergenic |
| GGGAACAAGGTTGATATAGA+TGG | 0.470323 | 4.4:-9692075 | MS.gene28157:CDS |
| CAGGAAAGGTTCCATAGTCT+TGG | 0.475873 | 4.4:-9692711 | MS.gene28157:CDS |
| GCATGATGACTTTCTTAAGC+AGG | 0.480067 | 4.4:-9692604 | MS.gene28157:intron |
| AATTGATCTCAGGCAGATAC+AGG | 0.484106 | 4.4:-9692129 | MS.gene28157:intron |
| CATTTCCCTTTGTATTACTT+GGG | 0.485534 | 4.4:-9692095 | MS.gene28157:CDS |
| AGGTTACAGAGAAGAAAGCT+AGG | 0.511353 | 4.4:-9691930 | MS.gene28157:CDS |
| AATACAAAGGGAAATGCCTC+AGG | 0.512303 | 4.4:+9692102 | None:intergenic |
| TTTAAAATTACTCACCTGCA+AGG | 0.529499 | 4.4:+9692847 | None:intergenic |
| TTTGAAACCTCTGCAAAAGA+GGG | 0.539597 | 4.4:-9691874 | MS.gene28157:CDS |
| GATTTGGGATACTGCAGGAC+AGG | 0.541113 | 4.4:-9692730 | MS.gene28157:CDS |
| AACAAAATCAGCCCCAATTG+TGG | 0.543201 | 4.4:+9692904 | None:intergenic |
| CTTGTTCCCAAGTAATACAA+AGG | 0.556095 | 4.4:+9692089 | None:intergenic |
| TTTCTTGGCAGTTATTTCCG+TGG | 0.558899 | 4.4:-9691679 | MS.gene28157:intron |
| AACAAGGTTGATATAGATGG+TGG | 0.570432 | 4.4:-9692072 | MS.gene28157:CDS |
| CAGAGAAGAAAGCTAGGGAA+TGG | 0.574138 | 4.4:-9691924 | MS.gene28157:CDS |
| TTGTTCCCAAGTAATACAAA+GGG | 0.581722 | 4.4:+9692090 | None:intergenic |
| TCGTTGTTCTGCTTCTGAAG+GGG | 0.584150 | 4.4:+9691645 | None:intergenic |
| TGGCAGATTTGGGATACTGC+AGG | 0.587071 | 4.4:-9692735 | MS.gene28157:intron |
| GGGATACTGCAGGACAGGAA+AGG | 0.587274 | 4.4:-9692725 | MS.gene28157:CDS |
| AAGGGGTTTCAGATATTCCA+CGG | 0.600915 | 4.4:+9691662 | None:intergenic |
| GGTTACAGAGAAGAAAGCTA+GGG | 0.611053 | 4.4:-9691929 | MS.gene28157:CDS |
| TCATTGTCCTTGGAGATAGT+GGG | 0.622102 | 4.4:-9693582 | MS.gene28157:intron |
| AGATGGTGGAAACAGTAGAA+GGG | 0.623050 | 4.4:-9692058 | MS.gene28157:intron |
| TAACATACCCACTATCTCCA+AGG | 0.630039 | 4.4:+9693575 | None:intergenic |
| GGCAGATACAGGCAATCCTG+AGG | 0.655656 | 4.4:-9692118 | MS.gene28157:CDS |
| AGGGAATGGTGTGCTTCTAG+GGG | 0.665067 | 4.4:-9691910 | MS.gene28157:CDS |
| ACAGTATAAAGCCACAATTG+GGG | 0.725981 | 4.4:-9692915 | MS.gene28157:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAGTACTTTTATTTTT+AGG | - | chr4.4:9692462-9692481 | MS.gene28157:intron | 10.0% |
| !!! | TTATAGTACTTTTATTTTTA+GGG | - | chr4.4:9692463-9692482 | MS.gene28157:intron | 10.0% |
| !! | ATTTACATTATCCTAAAAAA+AGG | + | chr4.4:9692094-9692113 | None:intergenic | 15.0% |
| !! | CAATTATAGAAAATATATTG+TGG | - | chr4.4:9692270-9692289 | MS.gene28157:intron | 15.0% |
| !!! | TATAGTACTTTTATTTTTAG+GGG | - | chr4.4:9692464-9692483 | MS.gene28157:intron | 15.0% |
| !!! | TTCCAAATGATTAATTTTTT+TGG | - | chr4.4:9691932-9691951 | MS.gene28157:intron | 15.0% |
| !! | AAAAAAGGAACAAAACAAAA+GGG | + | chr4.4:9691974-9691993 | None:intergenic | 20.0% |
| !! | AAAAATTGCATACTCAAAAT+CGG | + | chr4.4:9693066-9693085 | None:intergenic | 20.0% |
| !! | AACAAAAATTTACAATGGTA+TGG | - | chr4.4:9692497-9692516 | MS.gene28157:intron | 20.0% |
| !! | ATGATGTTATTATTACTTGA+TGG | - | chr4.4:9691738-9691757 | MS.gene28157:intron | 20.0% |
| !! | CATTTGATACATTAAACAAT+TGG | - | chr4.4:9692626-9692645 | MS.gene28157:CDS | 20.0% |
| !! | CTCCAAAAAAATTAATCATT+TGG | + | chr4.4:9691937-9691956 | None:intergenic | 20.0% |
| !! | GAATGAACAAAAATTTACAA+TGG | - | chr4.4:9692492-9692511 | MS.gene28157:intron | 20.0% |
| !! | TAAAAAAGGAACAAAACAAA+AGG | + | chr4.4:9691975-9691994 | None:intergenic | 20.0% |
| !! | TAAGTTCACACAAAAAAATT+AGG | - | chr4.4:9693506-9693525 | MS.gene28157:intron | 20.0% |
| !!! | AAATTCTGATATTTTGTTTC+AGG | - | chr4.4:9691788-9691807 | MS.gene28157:intron | 20.0% |
| !!! | AAATTTGGTCGTTTTAAAAA+AGG | + | chr4.4:9691989-9692008 | None:intergenic | 20.0% |
| !!! | AATTCTGATATTTTGTTTCA+GGG | - | chr4.4:9691789-9691808 | MS.gene28157:intron | 20.0% |
| !!! | TAACTTTCTTTTTTCTTGTT+AGG | - | chr4.4:9693479-9693498 | MS.gene28157:intron | 20.0% |
| !!! | TTTTTTAAAACGACCAAATT+TGG | - | chr4.4:9691988-9692007 | MS.gene28157:intron | 20.0% |
| ! | AACTTGTACAAATAGAAAAG+TGG | + | chr4.4:9692714-9692733 | None:intergenic | 25.0% |
| ! | ATAAAAAATCCAAATCCTGT+TGG | - | chr4.4:9693535-9693554 | MS.gene28157:intron | 25.0% |
| ! | ATCCTAAAAAAAGGATCTAT+TGG | + | chr4.4:9692085-9692104 | None:intergenic | 25.0% |
| ! | GTTTAGATTGCATGTAAATT+TGG | + | chr4.4:9692180-9692199 | None:intergenic | 25.0% |
| !! | AGAGAAATGTTTAAAATCGT+TGG | - | chr4.4:9692806-9692825 | MS.gene28157:intron | 25.0% |
| !! | TTTAAAATCGTTGGATCAAA+TGG | - | chr4.4:9692815-9692834 | MS.gene28157:intron | 25.0% |
| !!! | GATCTTAAGTGATTTGTTTT+AGG | - | chr4.4:9691898-9691917 | MS.gene28157:CDS | 25.0% |
| !!! | GTTTTATTGAAAATGCCAAA+TGG | + | chr4.4:9691844-9691863 | None:intergenic | 25.0% |
| !!! | TGACCAATATTGTTATTTCT+TGG | - | chr4.4:9693558-9693577 | MS.gene28157:intron | 25.0% |
| AAATTATGGTATCTCGCATT+TGG | - | chr4.4:9692243-9692262 | MS.gene28157:intron | 30.0% | |
| AACAGTATAAAGCCACAATT+GGG | - | chr4.4:9692336-9692355 | MS.gene28157:intron | 30.0% | |
| AAGATTGTAAGCCAAACAAA+GGG | + | chr4.4:9692744-9692763 | None:intergenic | 30.0% | |
| ATCTAAACGTATGCTGAAAT+TGG | - | chr4.4:9692192-9692211 | MS.gene28157:intron | 30.0% | |
| CATTTCCCTTTGTATTACTT+GGG | - | chr4.4:9693157-9693176 | MS.gene28157:intron | 30.0% | |
| CTGCCAAGAAATAACAATAT+TGG | + | chr4.4:9693564-9693583 | None:intergenic | 30.0% | |
| GACATGAAAACATATGAAGA+AGG | + | chr4.4:9691712-9691731 | None:intergenic | 30.0% | |
| GCAACAATTAAAAAGGCAAA+TGG | + | chr4.4:9693302-9693321 | None:intergenic | 30.0% | |
| GTAACCTGCAACAATTAAAA+AGG | + | chr4.4:9693309-9693328 | None:intergenic | 30.0% | |
| GTATGCTGAAATTGGTTATA+CGG | - | chr4.4:9692200-9692219 | MS.gene28157:intron | 30.0% | |
| TAAGATTGTAAGCCAAACAA+AGG | + | chr4.4:9692745-9692764 | None:intergenic | 30.0% | |
| TAGATTGCATGTAAATTTGG+TGG | + | chr4.4:9692177-9692196 | None:intergenic | 30.0% | |
| TTGTTCCCAAGTAATACAAA+GGG | + | chr4.4:9693165-9693184 | None:intergenic | 30.0% | |
| TTTATCTTCCGATAGAATCT+TGG | - | chr4.4:9692993-9693012 | MS.gene28157:intron | 30.0% | |
| TTTGATGTGAAATTGATCTC+AGG | - | chr4.4:9693113-9693132 | MS.gene28157:intron | 30.0% | |
| TTTGCAGAGGTTTCAAAATA+TGG | + | chr4.4:9693375-9693394 | None:intergenic | 30.0% | |
| ! | TTGGCAATCTTTTTACTTGT+GGG | - | chr4.4:9692019-9692038 | MS.gene28157:intron | 30.0% |
| ! | TTTAAAATTACTCACCTGCA+AGG | + | chr4.4:9692408-9692427 | None:intergenic | 30.0% |
| !! | CATGGTTCAATTGATTTGAT+CGG | + | chr4.4:9693024-9693043 | None:intergenic | 30.0% |
| !! | TGATATTTTGTTTCAGGGTT+GGG | - | chr4.4:9691794-9691813 | MS.gene28157:intron | 30.0% |
| !! | TTTGCCTTTTTAATTGTTGC+AGG | - | chr4.4:9693302-9693321 | MS.gene28157:intron | 30.0% |
| !!! | GTCCAATAGATCCTTTTTTT+AGG | - | chr4.4:9692080-9692099 | MS.gene28157:CDS | 30.0% |
| AATCGTTGGATCAAATGGAA+CGG | - | chr4.4:9692820-9692839 | MS.gene28157:intron | 35.0% | |
| ACAGTATAAAGCCACAATTG+GGG | - | chr4.4:9692337-9692356 | MS.gene28157:intron | 35.0% | |
| ATCCAAGTTTCATTGCAGTT+GGG | - | chr4.4:9692877-9692896 | MS.gene28157:CDS | 35.0% | |
| CAACAGTATAAAGCCACAAT+TGG | - | chr4.4:9692335-9692354 | MS.gene28157:intron | 35.0% | |
| CAGAAAGAGAACTTTGCTTA+AGG | - | chr4.4:9691647-9691666 | MS.gene28157:CDS | 35.0% | |
| CTTGTTCCCAAGTAATACAA+AGG | + | chr4.4:9693166-9693185 | None:intergenic | 35.0% | |
| CTTTGTATTACTTGGGAACA+AGG | - | chr4.4:9693164-9693183 | MS.gene28157:intron | 35.0% | |
| GCATTTCCCTTTGTATTACT+TGG | - | chr4.4:9693156-9693175 | MS.gene28157:intron | 35.0% | |
| GTGAACACTTTGCATGAAAA+AGG | + | chr4.4:9693280-9693299 | None:intergenic | 35.0% | |
| TAACAATATTGGTCACCAAC+AGG | + | chr4.4:9693553-9693572 | None:intergenic | 35.0% | |
| TACAATGGTATGGCAGATTT+GGG | - | chr4.4:9692507-9692526 | MS.gene28157:intron | 35.0% | |
| TGAAAATGCCAAATGGATAC+TGG | + | chr4.4:9691837-9691856 | None:intergenic | 35.0% | |
| TTACAATGGTATGGCAGATT+TGG | - | chr4.4:9692506-9692525 | MS.gene28157:intron | 35.0% | |
| TTGATGAACCAGTATCCATT+TGG | - | chr4.4:9691826-9691845 | MS.gene28157:CDS | 35.0% | |
| TTGCATACTCAAAATCGGAT+CGG | + | chr4.4:9693061-9693080 | None:intergenic | 35.0% | |
| ! | GTTGGCAATCTTTTTACTTG+TGG | - | chr4.4:9692018-9692037 | MS.gene28157:intron | 35.0% |
| ! | TGGCAATCTTTTTACTTGTG+GGG | - | chr4.4:9692020-9692039 | MS.gene28157:intron | 35.0% |
| ! | TTTGAAACCTCTGCAAAAGA+GGG | - | chr4.4:9693378-9693397 | MS.gene28157:intron | 35.0% |
| !! | AACAAGGTTGATATAGATGG+TGG | - | chr4.4:9693180-9693199 | MS.gene28157:intron | 35.0% |
| !! | CAATTGTGGCTTTATACTGT+TGG | + | chr4.4:9692337-9692356 | None:intergenic | 35.0% |
| !! | CTGATATTTTGTTTCAGGGT+TGG | - | chr4.4:9691793-9691812 | MS.gene28157:intron | 35.0% |
| !! | TAACTAGCTTTCGTTTCAAC+CGG | + | chr4.4:9692851-9692870 | None:intergenic | 35.0% |
| !!! | AGTTGTTTTTGCCCTTTGTT+TGG | - | chr4.4:9692730-9692749 | MS.gene28157:CDS | 35.0% |
| !!! | TTTTGAAACCTCTGCAAAAG+AGG | - | chr4.4:9693377-9693396 | MS.gene28157:intron | 35.0% |
| AAAATGCAGCTCCAAGACTA+TGG | + | chr4.4:9692555-9692574 | None:intergenic | 40.0% | |
| AACAAAATCAGCCCCAATTG+TGG | + | chr4.4:9692351-9692370 | None:intergenic | 40.0% | |
| AACCCAACTGCAATGAAACT+TGG | + | chr4.4:9692882-9692901 | None:intergenic | 40.0% | |
| AAGGGGTTTCAGATATTCCA+CGG | + | chr4.4:9693593-9693612 | None:intergenic | 40.0% | |
| AATACAAAGGGAAATGCCTC+AGG | + | chr4.4:9693153-9693172 | None:intergenic | 40.0% | |
| AATTGATCTCAGGCAGATAC+AGG | - | chr4.4:9693123-9693142 | MS.gene28157:intron | 40.0% | |
| AGGTTACAGAGAAGAAAGCT+AGG | - | chr4.4:9693322-9693341 | MS.gene28157:intron | 40.0% | |
| ATCAAATGGAACGGCTTAAC+CGG | - | chr4.4:9692829-9692848 | MS.gene28157:intron | 40.0% | |
| CGGTTCAACCAAGATTCTAT+CGG | + | chr4.4:9693004-9693023 | None:intergenic | 40.0% | |
| GATCCAAGTTTCATTGCAGT+TGG | - | chr4.4:9692876-9692895 | MS.gene28157:CDS | 40.0% | |
| GCATGATGACTTTCTTAAGC+AGG | - | chr4.4:9692648-9692667 | MS.gene28157:CDS | 40.0% | |
| GGTTACAGAGAAGAAAGCTA+GGG | - | chr4.4:9693323-9693342 | MS.gene28157:intron | 40.0% | |
| TAACATACCCACTATCTCCA+AGG | + | chr4.4:9691680-9691699 | None:intergenic | 40.0% | |
| TATTGGTCACCAACAGGATT+TGG | + | chr4.4:9693547-9693566 | None:intergenic | 40.0% | |
| TCATTGTCCTTGGAGATAGT+GGG | - | chr4.4:9691670-9691689 | MS.gene28157:CDS | 40.0% | |
| TGATAAACTCGTAACCTTGC+AGG | - | chr4.4:9692391-9692410 | MS.gene28157:intron | 40.0% | |
| TTCGTTGTTCTGCTTCTGAA+GGG | + | chr4.4:9693611-9693630 | None:intergenic | 40.0% | |
| TTGCTTAAGGTCATTGTCCT+TGG | - | chr4.4:9691660-9691679 | MS.gene28157:CDS | 40.0% | |
| ! | ATCCATCATAATTTGCCAGC+TGG | + | chr4.4:9692060-9692079 | None:intergenic | 40.0% |
| ! | TTGGAGCTGCATTTTACAGA+GGG | - | chr4.4:9692560-9692579 | MS.gene28157:intron | 40.0% |
| ! | TTTCTTGGCAGTTATTTCCG+TGG | - | chr4.4:9693573-9693592 | MS.gene28157:intron | 40.0% |
| ! | TTTTTACTTGTGGGGAACAG+TGG | - | chr4.4:9692028-9692047 | MS.gene28157:intron | 40.0% |
| !! | ACCAAATTTGGTGCATGAGT+TGG | - | chr4.4:9692000-9692019 | MS.gene28157:intron | 40.0% |
| !! | AGATGGTGGAAACAGTAGAA+GGG | - | chr4.4:9693194-9693213 | MS.gene28157:intron | 40.0% |
| !! | GGGAACAAGGTTGATATAGA+TGG | - | chr4.4:9693177-9693196 | MS.gene28157:intron | 40.0% |
| !! | TAGATGGTGGAAACAGTAGA+AGG | - | chr4.4:9693193-9693212 | MS.gene28157:intron | 40.0% |
| !! | TGGGGCTGATTTTGTTACAA+AGG | - | chr4.4:9692355-9692374 | MS.gene28157:intron | 40.0% |
| AATCGGATCGGTGAGACTTT+CGG | + | chr4.4:9693049-9693068 | None:intergenic | 45.0% | |
| CAGAGAAGAAAGCTAGGGAA+TGG | - | chr4.4:9693328-9693347 | MS.gene28157:intron | 45.0% | |
| CAGGAAAGGTTCCATAGTCT+TGG | - | chr4.4:9692541-9692560 | MS.gene28157:intron | 45.0% | |
| CTTCGTTGTTCTGCTTCTGA+AGG | + | chr4.4:9693612-9693631 | None:intergenic | 45.0% | |
| GCCAACTCATGCACCAAATT+TGG | + | chr4.4:9692004-9692023 | None:intergenic | 45.0% | |
| GTCATTGTCCTTGGAGATAG+TGG | - | chr4.4:9691669-9691688 | MS.gene28157:CDS | 45.0% | |
| GTCCAGCTGGCAAATTATGA+TGG | - | chr4.4:9692055-9692074 | MS.gene28157:intron | 45.0% | |
| TAGGGAATGGTGTGCTTCTA+GGG | - | chr4.4:9693341-9693360 | MS.gene28157:intron | 45.0% | |
| ! | AGGGGCAGATTGTTGTGTTT+TGG | - | chr4.4:9692579-9692598 | MS.gene28157:intron | 45.0% |
| ! | ATTGTAGCCCTCTTTTGCAG+AGG | + | chr4.4:9693388-9693407 | None:intergenic | 45.0% |
| ! | CTTGGAGCTGCATTTTACAG+AGG | - | chr4.4:9692559-9692578 | MS.gene28157:intron | 45.0% |
| ! | TCGTTGTTCTGCTTCTGAAG+GGG | + | chr4.4:9693610-9693629 | None:intergenic | 45.0% |
| ! | TGGAGCTGCATTTTACAGAG+GGG | - | chr4.4:9692561-9692580 | MS.gene28157:intron | 45.0% |
| !! | AATAATTGTAAAAAATAAAA+AGG | + | chr4.4:9693235-9693254 | None:intergenic | 5.0% |
| !!! | AAATTTTTAACATAAAATTA+TGG | - | chr4.4:9692229-9692248 | MS.gene28157:intron | 5.0% |
| AGGGAATGGTGTGCTTCTAG+GGG | - | chr4.4:9693342-9693361 | MS.gene28157:intron | 50.0% | |
| ATCGGATCGGTGAGACTTTC+GGG | + | chr4.4:9693048-9693067 | None:intergenic | 50.0% | |
| CTAGGGAATGGTGTGCTTCT+AGG | - | chr4.4:9693340-9693359 | MS.gene28157:intron | 50.0% | |
| ! | GATTTGGGATACTGCAGGAC+AGG | - | chr4.4:9692522-9692541 | MS.gene28157:intron | 50.0% |
| ! | TGGCAGATTTGGGATACTGC+AGG | - | chr4.4:9692517-9692536 | MS.gene28157:intron | 50.0% |
| GAACAGTGGTTCAGTCCAGC+TGG | - | chr4.4:9692042-9692061 | MS.gene28157:intron | 55.0% | |
| GGCAGATACAGGCAATCCTG+AGG | - | chr4.4:9693134-9693153 | MS.gene28157:intron | 55.0% | |
| GGGATACTGCAGGACAGGAA+AGG | - | chr4.4:9692527-9692546 | MS.gene28157:intron | 55.0% | |
| ! | TCGGTGAGACTTTCGGGTCA+TGG | + | chr4.4:9693042-9693061 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9691627 | 9693647 | 9691627 | ID=MS.gene28157 |
| chr4.4 | mRNA | 9691627 | 9693647 | 9691627 | ID=MS.gene28157.t1;Parent=MS.gene28157 |
| chr4.4 | exon | 9693583 | 9693647 | 9693583 | ID=MS.gene28157.t1.exon1;Parent=MS.gene28157.t1 |
| chr4.4 | CDS | 9693583 | 9693647 | 9693583 | ID=cds.MS.gene28157.t1;Parent=MS.gene28157.t1 |
| chr4.4 | exon | 9693438 | 9693464 | 9693438 | ID=MS.gene28157.t1.exon2;Parent=MS.gene28157.t1 |
| chr4.4 | CDS | 9693438 | 9693464 | 9693438 | ID=cds.MS.gene28157.t1;Parent=MS.gene28157.t1 |
| chr4.4 | exon | 9692862 | 9692961 | 9692862 | ID=MS.gene28157.t1.exon3;Parent=MS.gene28157.t1 |
| chr4.4 | CDS | 9692862 | 9692961 | 9692862 | ID=cds.MS.gene28157.t1;Parent=MS.gene28157.t1 |
| chr4.4 | exon | 9692605 | 9692751 | 9692605 | ID=MS.gene28157.t1.exon4;Parent=MS.gene28157.t1 |
| chr4.4 | CDS | 9692605 | 9692751 | 9692605 | ID=cds.MS.gene28157.t1;Parent=MS.gene28157.t1 |
| chr4.4 | exon | 9692059 | 9692139 | 9692059 | ID=MS.gene28157.t1.exon5;Parent=MS.gene28157.t1 |
| chr4.4 | CDS | 9692059 | 9692139 | 9692059 | ID=cds.MS.gene28157.t1;Parent=MS.gene28157.t1 |
| chr4.4 | exon | 9691805 | 9691950 | 9691805 | ID=MS.gene28157.t1.exon6;Parent=MS.gene28157.t1 |
| chr4.4 | CDS | 9691805 | 9691950 | 9691805 | ID=cds.MS.gene28157.t1;Parent=MS.gene28157.t1 |
| chr4.4 | exon | 9691627 | 9691690 | 9691627 | ID=MS.gene28157.t1.exon7;Parent=MS.gene28157.t1 |
| chr4.4 | CDS | 9691627 | 9691690 | 9691627 | ID=cds.MS.gene28157.t1;Parent=MS.gene28157.t1 |
| Gene Sequence |
| Protein sequence |
