Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29751.t1 | XP_003616812.1 | 86.1 | 173 | 11 | 1 | 1 | 173 | 1 | 160 | 1.20E-21 | 113.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29751.t1 | Q09134 | 100.0 | 159 | 0 | 0 | 15 | 173 | 1 | 159 | 4.3e-20 | 99.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29751.t1 | G7K7E0 | 86.1 | 173 | 11 | 1 | 1 | 173 | 1 | 160 | 8.5e-22 | 113.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene29751 | 0.802746 | 4.85E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene29751 | 0.832465 | 9.31E-56 | -1.69E-46 |
| MS.gene050404 | MS.gene29751 | 0.890644 | 8.17E-74 | -1.69E-46 |
| MS.gene050406 | MS.gene29751 | 0.864231 | 1.41E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene29751 | 0.803776 | 2.97E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene29751 | 0.80087 | 1.18E-48 | -1.69E-46 |
| MS.gene051240 | MS.gene29751 | 0.804435 | 2.16E-49 | -1.69E-46 |
| MS.gene051242 | MS.gene29751 | 0.814545 | 1.46E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene29751 | 0.827639 | 1.40E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene29751 | 0.818218 | 2.20E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene29751 | 0.829139 | 6.08E-55 | -1.69E-46 |
| MS.gene052290 | MS.gene29751 | 0.844669 | 6.55E-59 | -1.69E-46 |
| MS.gene052340 | MS.gene29751 | 0.813043 | 3.13E-51 | -1.69E-46 |
| MS.gene053073 | MS.gene29751 | 0.817831 | 2.69E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene29751 | 0.827955 | 1.18E-54 | -1.69E-46 |
| MS.gene053907 | MS.gene29751 | 0.826369 | 2.82E-54 | -1.69E-46 |
| MS.gene053971 | MS.gene29751 | 0.848327 | 6.58E-60 | -1.69E-46 |
| MS.gene055254 | MS.gene29751 | 0.840347 | 9.19E-58 | -1.69E-46 |
| MS.gene055277 | MS.gene29751 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene055428 | MS.gene29751 | 0.810345 | 1.21E-50 | -1.69E-46 |
| MS.gene056451 | MS.gene29751 | 0.810655 | 1.03E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene29751 | 0.843327 | 1.50E-58 | -1.69E-46 |
| MS.gene056664 | MS.gene29751 | 0.836531 | 8.86E-57 | -1.69E-46 |
| MS.gene056772 | MS.gene29751 | 0.800229 | 1.59E-48 | -1.69E-46 |
| MS.gene05702 | MS.gene29751 | 0.840588 | 7.95E-58 | -1.69E-46 |
| MS.gene058233 | MS.gene29751 | 0.825544 | 4.42E-54 | -1.69E-46 |
| MS.gene058276 | MS.gene29751 | 0.81943 | 1.17E-52 | -1.69E-46 |
| MS.gene058746 | MS.gene29751 | 0.8179 | 2.59E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene29751 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene059894 | MS.gene29751 | 0.886945 | 2.20E-72 | -1.69E-46 |
| MS.gene060407 | MS.gene29751 | 0.82263 | 2.14E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene29751 | 0.862254 | 5.77E-64 | -1.69E-46 |
| MS.gene061112 | MS.gene29751 | 0.85643 | 3.24E-62 | -1.69E-46 |
| MS.gene061265 | MS.gene29751 | 0.849357 | 3.41E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29751.t1 | MTR_5g084570 | 96.000 | 50 | 2 | 0 | 1 | 50 | 1 | 50 | 1.07e-28 | 104 |
| MS.gene29751.t1 | MTR_5g084540 | 100.000 | 26 | 0 | 0 | 148 | 173 | 135 | 160 | 1.22e-14 | 68.2 |
| MS.gene29751.t1 | MTR_5g084530 | 74.000 | 50 | 12 | 1 | 1 | 50 | 1 | 49 | 3.07e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 83 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTACCTCTGATGCCAAAA+AGG | 0.253882 | 5.3:-68389987 | MS.gene29751:CDS |
| GTTGTAACCTCCACCATATT+TGG | 0.288132 | 5.3:+68389810 | None:intergenic |
| GAAGTAAACGATGCCAAATA+TGG | 0.342429 | 5.3:-68389823 | MS.gene29751:CDS |
| ACCTGCCATGGCAATGGTAT+TGG | 0.432416 | 5.3:+68389512 | None:intergenic |
| GAACCATAGCCAAGAGGCCT+AGG | 0.443599 | 5.3:+68390050 | None:intergenic |
| CATCCTAGGCCTCTTGGCTA+TGG | 0.447886 | 5.3:-68390053 | MS.gene29751:CDS |
| AATCCTCATCCTAGGCCTCT+TGG | 0.458683 | 5.3:-68390059 | MS.gene29751:CDS |
| GCCAATACCATTGCCATGGC+AGG | 0.481585 | 5.3:-68389513 | MS.gene29751:CDS |
| AGTGTTGTCCTTAGCTTGCA+TGG | 0.498460 | 5.3:+68389465 | None:intergenic |
| GGTGGTTACAACCATGGTGG+AGG | 0.499176 | 5.3:-68389619 | MS.gene29751:CDS |
| GGTGGCTACAACCATGGTGG+AGG | 0.500815 | 5.3:-68389583 | MS.gene29751:CDS |
| GGATACAACCACGGTGGTGG+TGG | 0.504414 | 5.3:-68389721 | MS.gene29751:CDS |
| GGTGGATACAACCACGGTGG+TGG | 0.511490 | 5.3:-68389724 | MS.gene29751:CDS |
| AGAAAAGCAATCCTCATCCT+AGG | 0.516305 | 5.3:-68390067 | MS.gene29751:CDS |
| GGATACAACAATGGTGGAGG+TGG | 0.518813 | 5.3:-68389658 | MS.gene29751:CDS |
| GGATACAACAATGGTGGAGG+TGG | 0.518813 | 5.3:-68389700 | MS.gene29751:CDS |
| GGAGGTTACAACCACGGCGG+TGG | 0.523190 | 5.3:-68389799 | MS.gene29751:CDS |
| GGCTACAACCATGGTGGAGG+CGG | 0.523424 | 5.3:-68389580 | MS.gene29751:CDS |
| GGCGGTTACAACCACGGTGG+AGG | 0.523588 | 5.3:-68389541 | MS.gene29751:CDS |
| GGCGGTTACAACCACGGTGG+AGG | 0.523588 | 5.3:-68389562 | MS.gene29751:CDS |
| GGATACAACCACGGTGGTGG+TGG | 0.524452 | 5.3:-68389679 | MS.gene29751:CDS |
| GGTTACAACCACGGTGGTGG+TGG | 0.527779 | 5.3:-68389760 | MS.gene29751:CDS |
| TAGCCAAGAGGCCTAGGATG+AGG | 0.538496 | 5.3:+68390056 | None:intergenic |
| ATTTGTTGCCATGCAAGCTA+AGG | 0.539995 | 5.3:-68389473 | MS.gene29751:CDS |
| AATGGTGGTGGCTACAACCA+TGG | 0.544536 | 5.3:-68389589 | MS.gene29751:CDS |
| GGTTACAACCACGGCGGTGG+TGG | 0.544864 | 5.3:-68389796 | MS.gene29751:CDS |
| GGAGGTGGTTACAATGGTGG+TGG | 0.545650 | 5.3:-68389601 | MS.gene29751:CDS |
| GGTTACAACCATGGTGGAGG+TGG | 0.547395 | 5.3:-68389616 | MS.gene29751:CDS |
| GGAGGTTACAACCACGGTGG+TGG | 0.547932 | 5.3:-68389763 | MS.gene29751:CDS |
| GGATACAACCACGGTGGTGG+TGG | 0.553440 | 5.3:-68389637 | MS.gene29751:CDS |
| TTCCTCAGAAGTCTCAGCTA+GGG | 0.554700 | 5.3:-68390020 | MS.gene29751:CDS |
| GGTGGATACAACCACGGTGG+TGG | 0.558361 | 5.3:-68389640 | MS.gene29751:CDS |
| GGTGGATACAACCACGGTGG+TGG | 0.558361 | 5.3:-68389682 | MS.gene29751:CDS |
| CATGTGAGCAGCACCTGCCA+TGG | 0.559419 | 5.3:+68389500 | None:intergenic |
| TTTCCTCAGAAGTCTCAGCT+AGG | 0.560253 | 5.3:-68390021 | MS.gene29751:CDS |
| CACGGCGGTGGTGGTTACAA+TGG | 0.571191 | 5.3:-68389787 | MS.gene29751:CDS |
| GGTTACAACCACGGTGGAGG+CGG | 0.572554 | 5.3:-68389538 | MS.gene29751:CDS |
| AACGATGCCAAATATGGTGG+AGG | 0.573315 | 5.3:-68389817 | MS.gene29751:CDS |
| GGTTACAACCACGGTGGAGG+CGG | 0.574574 | 5.3:-68389559 | MS.gene29751:CDS |
| GGTGGATACAACAATGGCGG+TGG | 0.583166 | 5.3:-68389742 | MS.gene29751:CDS |
| GGCGGTGGTGGTTACAATGG+TGG | 0.594919 | 5.3:-68389784 | MS.gene29751:CDS |
| GGTTGTAACCGCCTCCACCA+TGG | 0.597627 | 5.3:+68389572 | None:intergenic |
| CATGGTGGAGGTGGTTACAA+TGG | 0.597788 | 5.3:-68389607 | MS.gene29751:CDS |
| GGTGGATACAACAATGGTGG+AGG | 0.598383 | 5.3:-68389661 | MS.gene29751:CDS |
| GGTGGATACAACAATGGTGG+AGG | 0.598383 | 5.3:-68389703 | MS.gene29751:CDS |
| GGTGGTGGTTACAATGGTGG+AGG | 0.609526 | 5.3:-68389781 | MS.gene29751:CDS |
| GGTGGAGGTGGTTACAATGG+TGG | 0.613370 | 5.3:-68389604 | MS.gene29751:CDS |
| AGCAGCACCTGCCATGGCAA+TGG | 0.620983 | 5.3:+68389506 | None:intergenic |
| GGTGGTGGTGGTTACAACCA+TGG | 0.640243 | 5.3:-68389625 | MS.gene29751:CDS |
| GGTGGAGGCGGTTACAACCA+CGG | 0.641005 | 5.3:-68389568 | MS.gene29751:CDS |
| GGTTGCCAATACCATTGCCA+TGG | 0.642022 | 5.3:-68389517 | MS.gene29751:CDS |
| GTCCCTAGCTGAGACTTCTG+AGG | 0.645915 | 5.3:+68390018 | None:intergenic |
| CATTGTAACCACCACCGCCG+TGG | 0.646466 | 5.3:+68389788 | None:intergenic |
| GTAAACGATGCCAAATATGG+TGG | 0.647144 | 5.3:-68389820 | MS.gene29751:CDS |
| CATTGTAACCACCTCCACCA+TGG | 0.649002 | 5.3:+68389608 | None:intergenic |
| TAAGAAGAACCATAGCCAAG+AGG | 0.664133 | 5.3:+68390044 | None:intergenic |
| GGTGGTGGTGGATACAACAA+TGG | 0.666044 | 5.3:-68389748 | MS.gene29751:CDS |
| GGTGGAGGCGGTTACAACCA+CGG | 0.674017 | 5.3:-68389547 | MS.gene29751:CDS |
| GGTGGTGGATACAACAATGG+TGG | 0.676280 | 5.3:-68389664 | MS.gene29751:CDS |
| GGTGGTGGATACAACAATGG+TGG | 0.676280 | 5.3:-68389706 | MS.gene29751:CDS |
| ATTGGCAACCGCCTCCACCG+TGG | 0.678280 | 5.3:+68389530 | None:intergenic |
| GGTTGTAACCGCCTCCACCG+TGG | 0.681332 | 5.3:+68389551 | None:intergenic |
| GGTGGTGGTGGATACAACAA+TGG | 0.684345 | 5.3:-68389667 | MS.gene29751:CDS |
| GGTGGTGGTGGATACAACAA+TGG | 0.684345 | 5.3:-68389709 | MS.gene29751:CDS |
| TATGGTGGAGGTTACAACCA+CGG | 0.702708 | 5.3:-68389805 | MS.gene29751:CDS |
| AATGGTGGAGGTTACAACCA+CGG | 0.710899 | 5.3:-68389769 | MS.gene29751:CDS |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.3:+68389671 | None:intergenic |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.3:+68389713 | None:intergenic |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.3:+68389752 | None:intergenic |
| GGTGGTGGCTACAACCATGG+TGG | 0.723784 | 5.3:-68389586 | MS.gene29751:CDS |
| GGTGGAGGTGGATACAACCA+CGG | 0.728168 | 5.3:-68389646 | MS.gene29751:CDS |
| GGTGGAGGTGGATACAACCA+CGG | 0.728168 | 5.3:-68389688 | MS.gene29751:CDS |
| GGTGGTGGTTACAACCATGG+TGG | 0.730633 | 5.3:-68389622 | MS.gene29751:CDS |
| AATGGCGGTGGATACAACCA+CGG | 0.732761 | 5.3:-68389730 | MS.gene29751:CDS |
| GGTGGTGGATACAACAATGG+CGG | 0.734675 | 5.3:-68389745 | MS.gene29751:CDS |
| GGTTGTAACCACCACCACCG+TGG | 0.740537 | 5.3:+68389629 | None:intergenic |
| GGCGGTGGATACAACCACGG+TGG | 0.764343 | 5.3:-68389727 | MS.gene29751:CDS |
| GGAGGCGGTTACAACCACGG+TGG | 0.788813 | 5.3:-68389565 | MS.gene29751:CDS |
| GGAGGCGGTTACAACCACGG+TGG | 0.797498 | 5.3:-68389544 | MS.gene29751:CDS |
| GGTGGAGGTTACAACCACGG+TGG | 0.812517 | 5.3:-68389766 | MS.gene29751:CDS |
| GGAGGTGGATACAACCACGG+TGG | 0.823069 | 5.3:-68389643 | MS.gene29751:CDS |
| GGAGGTGGATACAACCACGG+TGG | 0.823069 | 5.3:-68389685 | MS.gene29751:CDS |
| GGTGGAGGTTACAACCACGG+CGG | 0.825418 | 5.3:-68389802 | MS.gene29751:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATATATAGCTCACCCTTTT+TGG | + | chr5.3:68389562-68389581 | None:intergenic | 30.0% |
| GAAGTAAACGATGCCAAATA+TGG | - | chr5.3:68389709-68389728 | MS.gene29751:CDS | 35.0% | |
| AACTACCTCTGATGCCAAAA+AGG | - | chr5.3:68389545-68389564 | MS.gene29751:CDS | 40.0% | |
| ACTACCTCTGATGCCAAAAA+GGG | - | chr5.3:68389546-68389565 | MS.gene29751:CDS | 40.0% | |
| AGAAAAGCAATCCTCATCCT+AGG | - | chr5.3:68389465-68389484 | MS.gene29751:CDS | 40.0% | |
| GTAAACGATGCCAAATATGG+TGG | - | chr5.3:68389712-68389731 | MS.gene29751:CDS | 40.0% | |
| GTTGTAACCTCCACCATATT+TGG | + | chr5.3:68389725-68389744 | None:intergenic | 40.0% | |
| TAAGAAGAACCATAGCCAAG+AGG | + | chr5.3:68389491-68389510 | None:intergenic | 40.0% | |
| ! | ATTTGTTGCCATGCAAGCTA+AGG | - | chr5.3:68390059-68390078 | MS.gene29751:CDS | 40.0% |
| AACGATGCCAAATATGGTGG+AGG | - | chr5.3:68389715-68389734 | MS.gene29751:CDS | 45.0% | |
| TTCCTCAGAAGTCTCAGCTA+GGG | - | chr5.3:68389512-68389531 | MS.gene29751:CDS | 45.0% | |
| TTTCCTCAGAAGTCTCAGCT+AGG | - | chr5.3:68389511-68389530 | MS.gene29751:CDS | 45.0% | |
| ! | AATGGTGGAGGTTACAACCA+CGG | - | chr5.3:68389763-68389782 | MS.gene29751:CDS | 45.0% |
| ! | TATGGTGGAGGTTACAACCA+CGG | - | chr5.3:68389727-68389746 | MS.gene29751:CDS | 45.0% |
| !! | AGTGTTGTCCTTAGCTTGCA+TGG | + | chr5.3:68390070-68390089 | None:intergenic | 45.0% |
| AATCCTCATCCTAGGCCTCT+TGG | - | chr5.3:68389473-68389492 | MS.gene29751:CDS | 50.0% | |
| AATGGCGGTGGATACAACCA+CGG | - | chr5.3:68389802-68389821 | MS.gene29751:CDS | 50.0% | |
| ACCTGCCATGGCAATGGTAT+TGG | + | chr5.3:68390023-68390042 | None:intergenic | 50.0% | |
| CATTGTAACCACCTCCACCA+TGG | + | chr5.3:68389927-68389946 | None:intergenic | 50.0% | |
| GGTGGATACAACAATGGTGG+AGG | - | chr5.3:68389829-68389848 | MS.gene29751:CDS | 50.0% | |
| GGTTGCCAATACCATTGCCA+TGG | - | chr5.3:68390015-68390034 | MS.gene29751:CDS | 50.0% | |
| ! | CATGGTGGAGGTGGTTACAA+TGG | - | chr5.3:68389925-68389944 | MS.gene29751:intron | 50.0% |
| ! | GGATACAACAATGGTGGAGG+TGG | - | chr5.3:68389832-68389851 | MS.gene29751:CDS | 50.0% |
| !! | AATGGTGGTGGCTACAACCA+TGG | - | chr5.3:68389943-68389962 | MS.gene29751:intron | 50.0% |
| !! | CTCACCCTTTTTGGCATCAG+AGG | + | chr5.3:68389553-68389572 | None:intergenic | 50.0% |
| !! | GGTGGTGGATACAACAATGG+CGG | - | chr5.3:68389787-68389806 | MS.gene29751:CDS | 50.0% |
| !! | GGTGGTGGATACAACAATGG+TGG | - | chr5.3:68389787-68389806 | MS.gene29751:CDS | 50.0% |
| !! | GGTGGTGGTGGATACAACAA+TGG | - | chr5.3:68389784-68389803 | MS.gene29751:CDS | 50.0% |
| CATCCTAGGCCTCTTGGCTA+TGG | - | chr5.3:68389479-68389498 | MS.gene29751:CDS | 55.0% | |
| GAACCATAGCCAAGAGGCCT+AGG | + | chr5.3:68389485-68389504 | None:intergenic | 55.0% | |
| GCCAATACCATTGCCATGGC+AGG | - | chr5.3:68390019-68390038 | MS.gene29751:CDS | 55.0% | |
| GGAGGTGGTTACAATGGTGG+TGG | - | chr5.3:68389931-68389950 | MS.gene29751:intron | 55.0% | |
| GGTGGAGGTGGATACAACCA+CGG | - | chr5.3:68389844-68389863 | MS.gene29751:CDS | 55.0% | |
| GGTGGAGGTGGTTACAATGG+TGG | - | chr5.3:68389928-68389947 | MS.gene29751:intron | 55.0% | |
| GGTGGATACAACAATGGCGG+TGG | - | chr5.3:68389790-68389809 | MS.gene29751:CDS | 55.0% | |
| GGTGGTTACAACCATGGTGG+AGG | - | chr5.3:68389913-68389932 | MS.gene29751:intron | 55.0% | |
| GTCCCTAGCTGAGACTTCTG+AGG | + | chr5.3:68389517-68389536 | None:intergenic | 55.0% | |
| TAGCCAAGAGGCCTAGGATG+AGG | + | chr5.3:68389479-68389498 | None:intergenic | 55.0% | |
| TGTTGTATCCACCACCACCG+TGG | + | chr5.3:68389783-68389802 | None:intergenic | 55.0% | |
| ! | GGTGGTGGTTACAACCATGG+TGG | - | chr5.3:68389910-68389929 | MS.gene29751:intron | 55.0% |
| ! | GGTGGTGGTTACAATGGTGG+AGG | - | chr5.3:68389751-68389770 | MS.gene29751:CDS | 55.0% |
| ! | GGTTACAACCATGGTGGAGG+TGG | - | chr5.3:68389916-68389935 | MS.gene29751:intron | 55.0% |
| !! | GGTGGTGGTGGTTACAACCA+TGG | - | chr5.3:68389907-68389926 | MS.gene29751:intron | 55.0% |
| AGCAGCACCTGCCATGGCAA+TGG | + | chr5.3:68390029-68390048 | None:intergenic | 60.0% | |
| CATGTGAGCAGCACCTGCCA+TGG | + | chr5.3:68390035-68390054 | None:intergenic | 60.0% | |
| CATTGTAACCACCACCGCCG+TGG | + | chr5.3:68389747-68389766 | None:intergenic | 60.0% | |
| GGAGGTGGATACAACCACGG+TGG | - | chr5.3:68389847-68389866 | MS.gene29751:intron | 60.0% | |
| GGAGGTTACAACCACGGTGG+TGG | - | chr5.3:68389769-68389788 | MS.gene29751:CDS | 60.0% | |
| GGTGGAGGCGGTTACAACCA+CGG | - | chr5.3:68389964-68389983 | MS.gene29751:intron | 60.0% | |
| GGTGGAGGTTACAACCACGG+CGG | - | chr5.3:68389730-68389749 | MS.gene29751:CDS | 60.0% | |
| GGTGGAGGTTACAACCACGG+TGG | - | chr5.3:68389730-68389749 | MS.gene29751:CDS | 60.0% | |
| GGTGGATACAACCACGGTGG+TGG | - | chr5.3:68389808-68389827 | MS.gene29751:CDS | 60.0% | |
| GGTGGCTACAACCATGGTGG+AGG | - | chr5.3:68389949-68389968 | MS.gene29751:intron | 60.0% | |
| GGTTACAACCACGGTGGAGG+CGG | - | chr5.3:68389973-68389992 | MS.gene29751:intron | 60.0% | |
| GGTTGTAACCACCACCACCG+TGG | + | chr5.3:68389906-68389925 | None:intergenic | 60.0% | |
| GGTTGTAACCGCCTCCACCA+TGG | + | chr5.3:68389963-68389982 | None:intergenic | 60.0% | |
| ! | CACGGCGGTGGTGGTTACAA+TGG | - | chr5.3:68389745-68389764 | MS.gene29751:CDS | 60.0% |
| ! | GGATACAACCACGGTGGTGG+TGG | - | chr5.3:68389811-68389830 | MS.gene29751:CDS | 60.0% |
| ! | GGCGGTGGTGGTTACAATGG+TGG | - | chr5.3:68389748-68389767 | MS.gene29751:CDS | 60.0% |
| ! | GGCTACAACCATGGTGGAGG+CGG | - | chr5.3:68389952-68389971 | MS.gene29751:intron | 60.0% |
| ! | GGTGGTGGCTACAACCATGG+TGG | - | chr5.3:68389946-68389965 | MS.gene29751:intron | 60.0% |
| ! | GGTTACAACCACGGTGGTGG+TGG | - | chr5.3:68389772-68389791 | MS.gene29751:CDS | 60.0% |
| ATTGGCAACCGCCTCCACCG+TGG | + | chr5.3:68390005-68390024 | None:intergenic | 65.0% | |
| GGAGGCGGTTACAACCACGG+TGG | - | chr5.3:68389967-68389986 | MS.gene29751:intron | 65.0% | |
| GGAGGTTACAACCACGGCGG+TGG | - | chr5.3:68389733-68389752 | MS.gene29751:CDS | 65.0% | |
| GGCGGTGGATACAACCACGG+TGG | - | chr5.3:68389805-68389824 | MS.gene29751:CDS | 65.0% | |
| GGCGGTTACAACCACGGTGG+AGG | - | chr5.3:68389970-68389989 | MS.gene29751:intron | 65.0% | |
| GGTTACAACCACGGCGGTGG+TGG | - | chr5.3:68389736-68389755 | MS.gene29751:CDS | 65.0% | |
| GGTTGTAACCGCCTCCACCG+TGG | + | chr5.3:68389984-68390003 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 68389456 | 68390098 | 68389456 | ID=MS.gene29751 |
| chr5.3 | mRNA | 68389456 | 68390098 | 68389456 | ID=MS.gene29751.t1;Parent=MS.gene29751 |
| chr5.3 | exon | 68389987 | 68390098 | 68389987 | ID=MS.gene29751.t1.exon1;Parent=MS.gene29751.t1 |
| chr5.3 | CDS | 68389987 | 68390098 | 68389987 | ID=cds.MS.gene29751.t1;Parent=MS.gene29751.t1 |
| chr5.3 | exon | 68389456 | 68389865 | 68389456 | ID=MS.gene29751.t1.exon2;Parent=MS.gene29751.t1 |
| chr5.3 | CDS | 68389456 | 68389865 | 68389456 | ID=cds.MS.gene29751.t1;Parent=MS.gene29751.t1 |
| Gene Sequence |
| Protein sequence |
