Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29756.t1 | XP_003616827.2 | 96.7 | 423 | 14 | 0 | 1 | 423 | 72 | 494 | 6.30E-234 | 819.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29756.t1 | Q9MAU5 | 60.1 | 416 | 164 | 2 | 2 | 417 | 70 | 483 | 8.5e-147 | 521.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29756.t1 | G7K7F5 | 96.7 | 423 | 14 | 0 | 1 | 423 | 72 | 494 | 4.5e-234 | 819.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene29756 | 0.829151 | 6.04E-55 | -1.69E-46 |
| MS.gene049230 | MS.gene29756 | 0.802325 | 5.92E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene29756 | 0.819089 | 1.39E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene29756 | 0.805022 | 1.63E-49 | -1.69E-46 |
| MS.gene049647 | MS.gene29756 | 0.800997 | 1.11E-48 | -1.69E-46 |
| MS.gene049801 | MS.gene29756 | 0.8064 | 8.38E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene29756 | 0.814316 | 1.64E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene29756 | 0.800076 | 1.71E-48 | -1.69E-46 |
| MS.gene050228 | MS.gene29756 | 0.808009 | 3.82E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene29756 | 0.817831 | 2.69E-52 | -1.69E-46 |
| MS.gene050605 | MS.gene29756 | 0.815371 | 9.57E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene29756 | -0.803118 | 4.06E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene29756 | 0.81415 | 1.78E-51 | -1.69E-46 |
| MS.gene050759 | MS.gene29756 | 0.801808 | 7.56E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene29756 | 0.825546 | 4.42E-54 | -1.69E-46 |
| MS.gene051210 | MS.gene29756 | 0.812671 | 3.77E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene29756 | 0.800896 | 1.16E-48 | -1.69E-46 |
| MS.gene052333 | MS.gene29756 | 0.807484 | 4.94E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene29756 | 0.821691 | 3.53E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene29756 | 0.800376 | 1.48E-48 | -1.69E-46 |
| MS.gene05415 | MS.gene29756 | 0.819144 | 1.35E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene29756 | 0.833017 | 6.79E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene29756 | 0.801196 | 1.01E-48 | -1.69E-46 |
| MS.gene054405 | MS.gene29756 | 0.82169 | 3.53E-53 | -1.69E-46 |
| MS.gene054467 | MS.gene29756 | 0.811107 | 8.26E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene29756 | 0.813303 | 2.74E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene29756 | 0.839589 | 1.45E-57 | -1.69E-46 |
| MS.gene055926 | MS.gene29756 | 0.802486 | 5.48E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene29756 | 0.803197 | 3.91E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene29756 | 0.810271 | 1.25E-50 | -1.69E-46 |
| MS.gene056873 | MS.gene29756 | 0.80775 | 4.34E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene29756 | 0.839143 | 1.89E-57 | -1.69E-46 |
| MS.gene058595 | MS.gene29756 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene29756 | 0.822767 | 1.99E-53 | -1.69E-46 |
| MS.gene059382 | MS.gene29756 | 0.834537 | 2.83E-56 | -1.69E-46 |
| MS.gene05973 | MS.gene29756 | 0.805424 | 1.34E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene29756 | 0.837574 | 4.80E-57 | -1.69E-46 |
| MS.gene060322 | MS.gene29756 | 0.824557 | 7.57E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene29756 | 0.837733 | 4.37E-57 | -1.69E-46 |
| MS.gene060683 | MS.gene29756 | 0.841774 | 3.88E-58 | -1.69E-46 |
| MS.gene060685 | MS.gene29756 | 0.842995 | 1.84E-58 | -1.69E-46 |
| MS.gene060802 | MS.gene29756 | 0.822696 | 2.06E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene29756 | 0.815079 | 1.11E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene29756 | 0.85988 | 3.05E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29756.t1 | MTR_5g084690 | 96.690 | 423 | 14 | 0 | 1 | 423 | 72 | 494 | 0.0 | 837 |
| MS.gene29756.t1 | MTR_5g093980 | 49.173 | 423 | 211 | 3 | 1 | 423 | 67 | 485 | 1.97e-145 | 423 |
| MS.gene29756.t1 | MTR_3g054360 | 45.606 | 421 | 226 | 3 | 1 | 421 | 69 | 486 | 2.38e-126 | 374 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29756.t1 | AT1G04970 | 59.809 | 418 | 166 | 2 | 1 | 418 | 69 | 484 | 0.0 | 528 |
| MS.gene29756.t1 | AT1G04970 | 60.000 | 350 | 139 | 1 | 69 | 418 | 10 | 358 | 5.78e-157 | 447 |
| MS.gene29756.t1 | AT1G04970 | 60.000 | 350 | 139 | 1 | 69 | 418 | 10 | 358 | 5.78e-157 | 447 |
| MS.gene29756.t1 | AT3G20270 | 37.561 | 410 | 249 | 2 | 1 | 410 | 107 | 509 | 6.63e-102 | 313 |
| MS.gene29756.t1 | AT3G20270 | 37.561 | 410 | 249 | 2 | 1 | 410 | 107 | 509 | 6.63e-102 | 313 |
| MS.gene29756.t1 | AT3G20270 | 37.561 | 410 | 249 | 2 | 1 | 410 | 107 | 509 | 6.63e-102 | 313 |
| MS.gene29756.t1 | AT3G20270 | 37.561 | 410 | 249 | 2 | 1 | 410 | 314 | 716 | 7.10e-99 | 311 |
| MS.gene29756.t1 | AT3G20270 | 37.561 | 410 | 249 | 2 | 1 | 410 | 314 | 716 | 7.10e-99 | 311 |
| MS.gene29756.t1 | AT3G20270 | 37.326 | 359 | 218 | 2 | 1 | 359 | 107 | 458 | 7.32e-85 | 267 |
Find 89 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGAAATTGAACTTAAAT+TGG | 0.137028 | 5.3:+68478538 | MS.gene29756:CDS |
| TAAAGATATTTCAATAAAAT+TGG | 0.163549 | 5.3:+68478619 | MS.gene29756:CDS |
| TTCAAGTTCATTTCATGATT+TGG | 0.181512 | 5.3:-68479621 | None:intergenic |
| TCAGGTTTGGTCAAAATAAA+TGG | 0.203844 | 5.3:+68480389 | MS.gene29756:CDS |
| GGAATTGAGATTGTTGCTTC+TGG | 0.206164 | 5.3:+68477715 | MS.gene29756:CDS |
| GGAGAACCAGGAAGGATATT+TGG | 0.213932 | 5.3:+68478565 | MS.gene29756:CDS |
| TCTACGAATGTTCCTTATTC+AGG | 0.249285 | 5.3:+68480481 | MS.gene29756:CDS |
| CTTATGAGTATAGTAGTATT+TGG | 0.262312 | 5.3:+68477767 | MS.gene29756:CDS |
| TAAGGTGAAACCATGAATAA+TGG | 0.283240 | 5.3:-68481145 | None:intergenic |
| AATGCCTTCTCCAAGATTCT+TGG | 0.286219 | 5.3:-68478845 | None:intergenic |
| TCAATAATTGTCCACATAAC+TGG | 0.286728 | 5.3:-68481069 | None:intergenic |
| TCAAGTTCATTTCATGATTT+GGG | 0.290277 | 5.3:-68479620 | None:intergenic |
| AACATAAACCTACCTGAATA+AGG | 0.302925 | 5.3:-68480493 | None:intergenic |
| CCACAGATGATTCAAGCTTC+AGG | 0.313074 | 5.3:+68480371 | MS.gene29756:intron |
| CTTAGATGTGCATTTGCATA+TGG | 0.343364 | 5.3:-68481105 | None:intergenic |
| TGAGATCCAAATATCCTTCC+TGG | 0.345049 | 5.3:-68478571 | None:intergenic |
| GATGAATTTGTGCATAGAAT+TGG | 0.348442 | 5.3:-68479060 | None:intergenic |
| AAGTCTTCCGAAGGAGGTTC+CGG | 0.360461 | 5.3:+68478891 | MS.gene29756:CDS |
| CCTGTTAAGGTTTCTGATCA+AGG | 0.372849 | 5.3:+68477796 | MS.gene29756:CDS |
| ATGGAAATTGAACTTAAATT+GGG | 0.389137 | 5.3:+68478539 | MS.gene29756:CDS |
| TTACCCTTGCCCATTATTCA+TGG | 0.394754 | 5.3:+68481135 | MS.gene29756:CDS |
| AATTGAACTTAAATTGGGAT+TGG | 0.398273 | 5.3:+68478544 | MS.gene29756:CDS |
| GAATTGAGATTGTTGCTTCT+GGG | 0.399939 | 5.3:+68477716 | MS.gene29756:CDS |
| TATTTGGTTTGGTCCTGTTA+AGG | 0.399972 | 5.3:+68477783 | MS.gene29756:CDS |
| TTACTAAGTGAGTCGTCAAT+TGG | 0.401609 | 5.3:+68478958 | MS.gene29756:CDS |
| ACCATCAGATTGGGTGACTT+TGG | 0.403675 | 5.3:+68480428 | MS.gene29756:CDS |
| ATATTTGGATCTCAAACTTA+AGG | 0.406500 | 5.3:+68478580 | MS.gene29756:CDS |
| AATGCTATCACCAAGAATCT+TGG | 0.412923 | 5.3:+68478835 | MS.gene29756:CDS |
| GATTATCTCTGCGTCTTGTA+AGG | 0.416518 | 5.3:-68481163 | None:intergenic |
| TCAAGGTTCAGCACAAGTTC+AGG | 0.426430 | 5.3:+68477813 | MS.gene29756:CDS |
| TCATCGACCGGAACCTCCTT+CGG | 0.427115 | 5.3:-68478898 | None:intergenic |
| CCTTGATCAGAAACCTTAAC+AGG | 0.427898 | 5.3:-68477796 | None:intergenic |
| TTCAGGCGAAATTTATGCAT+TGG | 0.438077 | 5.3:+68479517 | MS.gene29756:intron |
| AAGGTGAAACCATGAATAAT+GGG | 0.440200 | 5.3:-68481144 | None:intergenic |
| GATGATTCAAGCTTCAGGTT+TGG | 0.443327 | 5.3:+68480376 | MS.gene29756:intron |
| GGTGCATCTTGGCTTTATCA+AGG | 0.447248 | 5.3:+68478647 | MS.gene29756:CDS |
| GTTGTAATTTGAGCTTGGAT+TGG | 0.452126 | 5.3:+68477743 | MS.gene29756:CDS |
| ACTTTGGAATGTCATTGAAA+TGG | 0.456473 | 5.3:+68480444 | MS.gene29756:CDS |
| TTATTATTCCTCAATTGTAC+AGG | 0.463170 | 5.3:+68479592 | MS.gene29756:CDS |
| CAATTGGGTTTGAAACGAAT+GGG | 0.463327 | 5.3:+68478974 | MS.gene29756:CDS |
| GGGTATTTCCTGTACAATTG+AGG | 0.465380 | 5.3:-68479600 | None:intergenic |
| TTTGTCATCTCCTCCGGTTG+TGG | 0.473852 | 5.3:+68479650 | MS.gene29756:CDS |
| GGTTAGTTGTAATTTGAGCT+TGG | 0.473939 | 5.3:+68477738 | MS.gene29756:CDS |
| TATATCTTTGTCATCTCCTC+CGG | 0.474075 | 5.3:+68479644 | MS.gene29756:CDS |
| TGATCTGAAATCTCCACAAC+CGG | 0.477470 | 5.3:-68479663 | None:intergenic |
| TTGTGCCAGAGGTTAGGAAT+AGG | 0.480438 | 5.3:-68479024 | None:intergenic |
| CCCTGCCTATTCCTAACCTC+TGG | 0.480453 | 5.3:+68479019 | MS.gene29756:CDS |
| ACCAGTAGCATGCATCTCAT+TGG | 0.482084 | 5.3:+68479749 | MS.gene29756:CDS |
| GAGTATAGTAGTATTTGGTT+TGG | 0.487613 | 5.3:+68477772 | MS.gene29756:CDS |
| TCAATTGGGTTTGAAACGAA+TGG | 0.488508 | 5.3:+68478973 | MS.gene29756:CDS |
| CTCGTAGGTACCATCAGATT+GGG | 0.490558 | 5.3:+68480419 | MS.gene29756:CDS |
| TACTAAGTGAGTCGTCAATT+GGG | 0.490771 | 5.3:+68478959 | MS.gene29756:CDS |
| CCTCGTAGGTACCATCAGAT+TGG | 0.492012 | 5.3:+68480418 | MS.gene29756:CDS |
| GATTCTTCTATTGTTAAGCC+TGG | 0.493921 | 5.3:+68477685 | MS.gene29756:CDS |
| GGTACAAGAATTCCAATGTT+GGG | 0.495246 | 5.3:+68477613 | None:intergenic |
| ACCAATGAGATGCATGCTAC+TGG | 0.506928 | 5.3:-68479750 | None:intergenic |
| GATATTTCAATAAAATTGGA+TGG | 0.510412 | 5.3:+68478623 | MS.gene29756:CDS |
| GCAAATGCACATCTAAGTAA+AGG | 0.513079 | 5.3:+68481111 | MS.gene29756:CDS |
| GAAATTTATGCATTGGATTG+TGG | 0.522169 | 5.3:+68479524 | MS.gene29756:CDS |
| AATTGAGATTGTTGCTTCTG+GGG | 0.524103 | 5.3:+68477717 | MS.gene29756:CDS |
| CAATCTCTATTGAACACTGC+AGG | 0.538757 | 5.3:+68479561 | MS.gene29756:CDS |
| GCCAGAGGTTAGGAATAGGC+AGG | 0.539046 | 5.3:-68479020 | None:intergenic |
| GTGCATCTTGGCTTTATCAA+GGG | 0.540311 | 5.3:+68478648 | MS.gene29756:CDS |
| AATTGGATGGTGGTGCATCT+TGG | 0.543201 | 5.3:+68478636 | MS.gene29756:CDS |
| ATTGTTAAGCCTGGTGAGAG+TGG | 0.546066 | 5.3:+68477694 | MS.gene29756:CDS |
| TCATTGAAATGGAGCAACAT+TGG | 0.550438 | 5.3:+68480455 | MS.gene29756:CDS |
| TTTGAAAAGTCTTCCGAAGG+AGG | 0.555501 | 5.3:+68478885 | MS.gene29756:CDS |
| GTGTTCAATAGAGATTGATC+TGG | 0.560509 | 5.3:-68479555 | None:intergenic |
| GAGATTTCAGATCAGAAAGC+AGG | 0.576449 | 5.3:+68479672 | MS.gene29756:CDS |
| ATCTTGGAGAAGGCATTACA+AGG | 0.578899 | 5.3:+68478851 | MS.gene29756:CDS |
| CTCTATTGAACACTGCAGGA+TGG | 0.579439 | 5.3:+68479565 | MS.gene29756:CDS |
| ATCTCAATTCCACTCTCACC+AGG | 0.579964 | 5.3:-68477703 | None:intergenic |
| TAAATTGGGATTGGAGAACC+AGG | 0.581245 | 5.3:+68478553 | MS.gene29756:CDS |
| GAAACCATGAATAATGGGCA+AGG | 0.588237 | 5.3:-68481139 | None:intergenic |
| AACGAAGAGTGATCATCGAC+CGG | 0.595323 | 5.3:-68478910 | None:intergenic |
| TCCAAAGTCACCCAATCTGA+TGG | 0.597147 | 5.3:-68480429 | None:intergenic |
| ATCACCAAGAATCTTGGAGA+AGG | 0.605412 | 5.3:+68478841 | MS.gene29756:CDS |
| AAAACTTACATCATAATACA+AGG | 0.616369 | 5.3:-68479133 | None:intergenic |
| ATAAATGGAAATAACCTCGT+AGG | 0.618799 | 5.3:+68480404 | MS.gene29756:CDS |
| ATATTTGAAAAGTCTTCCGA+AGG | 0.620652 | 5.3:+68478882 | MS.gene29756:CDS |
| AAGTAAACACTACCCAACAT+TGG | 0.621139 | 5.3:-68477625 | None:intergenic |
| ATTTCAATAAAATTGGATGG+TGG | 0.629003 | 5.3:+68478626 | MS.gene29756:CDS |
| AAACCATGAATAATGGGCAA+GGG | 0.633824 | 5.3:-68481138 | None:intergenic |
| TTGGGATTGGAGAACCAGGA+AGG | 0.639874 | 5.3:+68478557 | MS.gene29756:CDS |
| CCAGAGGTTAGGAATAGGCA+GGG | 0.652423 | 5.3:-68479019 | None:intergenic |
| GATCTCAAACTTAAGGACTG+TGG | 0.659076 | 5.3:+68478587 | MS.gene29756:CDS |
| TCTGAAATCTCCACAACCGG+AGG | 0.673824 | 5.3:-68479660 | None:intergenic |
| GCTAGCAATCACTTTAGACG+AGG | 0.719991 | 5.3:+68479089 | MS.gene29756:CDS |
| CCAATCTGATGGTACCTACG+AGG | 0.737067 | 5.3:-68480418 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGATATTTCAATAAAAT+TGG | + | chr5.3:68478619-68478638 | MS.gene29756:CDS | 10.0% |
| !!! | AATATTTTTTTCTATATCAT+TGG | + | chr5.3:68479459-68479478 | MS.gene29756:intron | 10.0% |
| !!! | GATATAGAAAAAAATATTTT+AGG | - | chr5.3:68479457-68479476 | None:intergenic | 10.0% |
| !! | AAAAACATACACATAAATTA+TGG | - | chr5.3:68479810-68479829 | None:intergenic | 15.0% |
| !! | AATAAAAAACACAAAAACAA+AGG | - | chr5.3:68477854-68477873 | None:intergenic | 15.0% |
| !! | TCATAAAAATGTAATGAAAA+GGG | + | chr5.3:68478480-68478499 | MS.gene29756:intron | 15.0% |
| !! | TTCATAAAAATGTAATGAAA+AGG | + | chr5.3:68478479-68478498 | MS.gene29756:intron | 15.0% |
| !! | TTGATTATGATGAATTATAT+GGG | + | chr5.3:68479891-68479910 | MS.gene29756:intron | 15.0% |
| !! | TTTGATTATGATGAATTATA+TGG | + | chr5.3:68479890-68479909 | MS.gene29756:intron | 15.0% |
| !!! | TGTTTTTGTGTTTTTTATTT+TGG | + | chr5.3:68477855-68477874 | MS.gene29756:intron | 15.0% |
| !! | AAAACTTACATCATAATACA+AGG | - | chr5.3:68479136-68479155 | None:intergenic | 20.0% |
| !! | AATATGGATAATGTAACTTA+TGG | + | chr5.3:68478390-68478409 | MS.gene29756:intron | 20.0% |
| !! | ACATAAATCATTATAAGTTC+AGG | + | chr5.3:68480579-68480598 | MS.gene29756:intron | 20.0% |
| !! | ACATAATCTATTTATGATTG+TGG | + | chr5.3:68477940-68477959 | MS.gene29756:intron | 20.0% |
| !! | AGTTTAAAAGATTAGATGTT+TGG | + | chr5.3:68480146-68480165 | MS.gene29756:intron | 20.0% |
| !! | ATATATTCAGAGAATAAGAA+TGG | - | chr5.3:68479840-68479859 | None:intergenic | 20.0% |
| !! | ATGGAAATTGAACTTAAATT+GGG | + | chr5.3:68478539-68478558 | MS.gene29756:CDS | 20.0% |
| !! | ATTCTCTGAATATATTACTT+TGG | + | chr5.3:68479845-68479864 | MS.gene29756:intron | 20.0% |
| !! | GATATTTCAATAAAATTGGA+TGG | + | chr5.3:68478623-68478642 | MS.gene29756:CDS | 20.0% |
| !! | TAAAAAGATAGCTTATACAT+AGG | - | chr5.3:68478037-68478056 | None:intergenic | 20.0% |
| !! | TAATTAAGTTTATTCTCTCA+AGG | - | chr5.3:68477972-68477991 | None:intergenic | 20.0% |
| !! | TCATAATCAAAATAACATTG+AGG | - | chr5.3:68479881-68479900 | None:intergenic | 20.0% |
| !! | TCATATTGATATTTAAACAC+AGG | - | chr5.3:68480626-68480645 | None:intergenic | 20.0% |
| !!! | AACATCTAATCTTTTAAACT+CGG | - | chr5.3:68480146-68480165 | None:intergenic | 20.0% |
| !!! | ATCATTAAATAAGTTGACAT+TGG | - | chr5.3:68478351-68478370 | None:intergenic | 20.0% |
| !!! | TTTTTAACAAAAGATAAGCA+GGG | + | chr5.3:68478051-68478070 | MS.gene29756:intron | 20.0% |
| !!! | TTTTTTCTATATCATTGGAT+TGG | + | chr5.3:68479464-68479483 | MS.gene29756:intron | 20.0% |
| ! | AAAACACTGTTTAAGTCATA+GGG | - | chr5.3:68479348-68479367 | None:intergenic | 25.0% |
| ! | AAATTTCTTTATGCTTTCAG+TGG | + | chr5.3:68480675-68480694 | MS.gene29756:intron | 25.0% |
| ! | AAGACGATTTAAAGATGATT+TGG | + | chr5.3:68478226-68478245 | MS.gene29756:intron | 25.0% |
| ! | AATAAGTTAAAAACAGCTTC+TGG | - | chr5.3:68480816-68480835 | None:intergenic | 25.0% |
| ! | AATTGAACTTAAATTGGGAT+TGG | + | chr5.3:68478544-68478563 | MS.gene29756:CDS | 25.0% |
| ! | AGAAATGACAACTTATTGTA+AGG | - | chr5.3:68480318-68480337 | None:intergenic | 25.0% |
| ! | ATATTTGGATCTCAAACTTA+AGG | + | chr5.3:68478580-68478599 | MS.gene29756:CDS | 25.0% |
| ! | ATTTCAATAAAATTGGATGG+TGG | + | chr5.3:68478626-68478645 | MS.gene29756:CDS | 25.0% |
| ! | CATGGAAATTGAACTTAAAT+TGG | + | chr5.3:68478538-68478557 | MS.gene29756:CDS | 25.0% |
| ! | CTTATGAGTATAGTAGTATT+TGG | + | chr5.3:68477767-68477786 | MS.gene29756:CDS | 25.0% |
| ! | TAAAACACTGTTTAAGTCAT+AGG | - | chr5.3:68479349-68479368 | None:intergenic | 25.0% |
| ! | TCAAGTTCATTTCATGATTT+GGG | - | chr5.3:68479623-68479642 | None:intergenic | 25.0% |
| ! | TCTATTTATGATTGTGGTTT+AGG | + | chr5.3:68477946-68477965 | MS.gene29756:intron | 25.0% |
| ! | TGTGACACATTTATTGATAT+TGG | + | chr5.3:68478179-68478198 | MS.gene29756:intron | 25.0% |
| ! | TTAGGAAAATTCATGCTTTA+CGG | - | chr5.3:68479439-68479458 | None:intergenic | 25.0% |
| ! | TTATGATGAATTATATGGGT+TGG | + | chr5.3:68479895-68479914 | MS.gene29756:intron | 25.0% |
| ! | TTATTATTCCTCAATTGTAC+AGG | + | chr5.3:68479592-68479611 | MS.gene29756:CDS | 25.0% |
| ! | TTATTCACAATAGTCATGTT+TGG | - | chr5.3:68480990-68481009 | None:intergenic | 25.0% |
| ! | TTGTATGTATATGTGTAGAA+TGG | + | chr5.3:68477880-68477899 | MS.gene29756:intron | 25.0% |
| !! | ACAGAAAACGAATGATTTTA+TGG | + | chr5.3:68478734-68478753 | MS.gene29756:intron | 25.0% |
| !! | CTTTTTAACAAAAGATAAGC+AGG | + | chr5.3:68478050-68478069 | MS.gene29756:intron | 25.0% |
| !! | TAAATAAGTTGACATTGGTA+GGG | - | chr5.3:68478346-68478365 | None:intergenic | 25.0% |
| !! | TTAAATAAGTTGACATTGGT+AGG | - | chr5.3:68478347-68478366 | None:intergenic | 25.0% |
| !! | TTCAAGTTCATTTCATGATT+TGG | - | chr5.3:68479624-68479643 | None:intergenic | 25.0% |
| !! | TTTTATTGCTGCACTAAATA+TGG | + | chr5.3:68478374-68478393 | MS.gene29756:intron | 25.0% |
| !!! | AATTTGATAAGTGCTGATTT+TGG | + | chr5.3:68478503-68478522 | MS.gene29756:intron | 25.0% |
| !!! | ATGATGTAAGTTTTGATGTT+TGG | + | chr5.3:68479142-68479161 | MS.gene29756:intron | 25.0% |
| !!! | CATTTTTTTATTCAACTGCA+TGG | - | chr5.3:68479228-68479247 | None:intergenic | 25.0% |
| !!! | GATAAATTGAAAAGTGCTTA+TGG | + | chr5.3:68478135-68478154 | MS.gene29756:intron | 25.0% |
| AAACACTGTTTAAGTCATAG+GGG | - | chr5.3:68479347-68479366 | None:intergenic | 30.0% | |
| AAATGAGCTAGAATCTGATA+TGG | - | chr5.3:68478688-68478707 | None:intergenic | 30.0% | |
| AACATAAACCTACCTGAATA+AGG | - | chr5.3:68480496-68480515 | None:intergenic | 30.0% | |
| AAGGTGAAACCATGAATAAT+GGG | - | chr5.3:68481147-68481166 | None:intergenic | 30.0% | |
| ATAAATGGAAATAACCTCGT+AGG | + | chr5.3:68480404-68480423 | MS.gene29756:CDS | 30.0% | |
| ATACACACATCAGTTAATCT+CGG | - | chr5.3:68478290-68478309 | None:intergenic | 30.0% | |
| ATATTTGAAAAGTCTTCCGA+AGG | + | chr5.3:68478882-68478901 | MS.gene29756:CDS | 30.0% | |
| GAAATTTATGCATTGGATTG+TGG | + | chr5.3:68479524-68479543 | MS.gene29756:CDS | 30.0% | |
| GAGTATAGTAGTATTTGGTT+TGG | + | chr5.3:68477772-68477791 | MS.gene29756:CDS | 30.0% | |
| GATGAATTTGTGCATAGAAT+TGG | - | chr5.3:68479063-68479082 | None:intergenic | 30.0% | |
| TAAGATGTCTCATTGATGAA+GGG | + | chr5.3:68481022-68481041 | MS.gene29756:intron | 30.0% | |
| TAAGGTGAAACCATGAATAA+TGG | - | chr5.3:68481148-68481167 | None:intergenic | 30.0% | |
| TACAAGTTGTTGTCAATTAC+CGG | + | chr5.3:68480030-68480049 | MS.gene29756:intron | 30.0% | |
| TATGCTATGCTACAATACTA+TGG | - | chr5.3:68480067-68480086 | None:intergenic | 30.0% | |
| TCAATAATTGTCCACATAAC+TGG | - | chr5.3:68481072-68481091 | None:intergenic | 30.0% | |
| TGGATAATGTAACTTATGGA+TGG | + | chr5.3:68478394-68478413 | MS.gene29756:intron | 30.0% | |
| TTAAGATGTCTCATTGATGA+AGG | + | chr5.3:68481021-68481040 | MS.gene29756:intron | 30.0% | |
| ! | TCAGGTTTGGTCAAAATAAA+TGG | + | chr5.3:68480389-68480408 | MS.gene29756:CDS | 30.0% |
| ! | TGTGAGATTGAGAGATTTTA+TGG | + | chr5.3:68480772-68480791 | MS.gene29756:intron | 30.0% |
| ! | TTTTATTCAACTGCATGGTT+CGG | - | chr5.3:68479223-68479242 | None:intergenic | 30.0% |
| ! | TTTTCGTATAAGCTATAAGC+TGG | + | chr5.3:68478082-68478101 | MS.gene29756:intron | 30.0% |
| !! | ACTTTGGAATGTCATTGAAA+TGG | + | chr5.3:68480444-68480463 | MS.gene29756:CDS | 30.0% |
| !! | CTTCATCACTGATTTAAGAT+CGG | - | chr5.3:68478209-68478228 | None:intergenic | 30.0% |
| !!! | AGTTTTGATTCATACCTAAC+AGG | + | chr5.3:68478770-68478789 | MS.gene29756:intron | 30.0% |
| !!! | CTGCATGTTTTTTTAGATAC+CGG | + | chr5.3:68478310-68478329 | MS.gene29756:intron | 30.0% |
| !!! | GGTTTTAATTTGGATTGGTT+CGG | + | chr5.3:68479283-68479302 | MS.gene29756:intron | 30.0% |
| !!! | GGTTTTTTGCGGTTTTAATT+TGG | + | chr5.3:68479273-68479292 | MS.gene29756:intron | 30.0% |
| !!! | GTTTTTCTATTGGATTGGTT+CGG | + | chr5.3:68479312-68479331 | MS.gene29756:intron | 30.0% |
| !!! | TGCATGTTTTTTTAGATACC+GGG | + | chr5.3:68478311-68478330 | MS.gene29756:intron | 30.0% |
| !!! | TTTGCGGTTTTAATTTGGAT+TGG | + | chr5.3:68479278-68479297 | MS.gene29756:intron | 30.0% |
| AATCATCTGTGGAAACAAGA+TGG | - | chr5.3:68480363-68480382 | None:intergenic | 35.0% | |
| AATGCTATCACCAAGAATCT+TGG | + | chr5.3:68478835-68478854 | MS.gene29756:CDS | 35.0% | |
| ATTGTAAGGTGTACAAAGAC+AGG | - | chr5.3:68480304-68480323 | None:intergenic | 35.0% | |
| CACATAGGGTATGTTTGAAT+TGG | + | chr5.3:68480717-68480736 | MS.gene29756:intron | 35.0% | |
| CTTAGATGTGCATTTGCATA+TGG | - | chr5.3:68481108-68481127 | None:intergenic | 35.0% | |
| GAGAAATTGTTTCGATGTTC+AGG | + | chr5.3:68479500-68479519 | MS.gene29756:intron | 35.0% | |
| GATTCTTCTATTGTTAAGCC+TGG | + | chr5.3:68477685-68477704 | MS.gene29756:CDS | 35.0% | |
| GCAAATGCACATCTAAGTAA+AGG | + | chr5.3:68481111-68481130 | MS.gene29756:CDS | 35.0% | |
| GTGTTCAATAGAGATTGATC+TGG | - | chr5.3:68479558-68479577 | None:intergenic | 35.0% | |
| GTTGTAATTTGAGCTTGGAT+TGG | + | chr5.3:68477743-68477762 | MS.gene29756:CDS | 35.0% | |
| TACTAAGTGAGTCGTCAATT+GGG | + | chr5.3:68478959-68478978 | MS.gene29756:CDS | 35.0% | |
| TATATCTTTGTCATCTCCTC+CGG | + | chr5.3:68479644-68479663 | MS.gene29756:CDS | 35.0% | |
| TCAGAGAATAAGAATGGTGA+AGG | - | chr5.3:68479834-68479853 | None:intergenic | 35.0% | |
| TCATTGAAATGGAGCAACAT+TGG | + | chr5.3:68480455-68480474 | MS.gene29756:CDS | 35.0% | |
| TCTACGAATGTTCCTTATTC+AGG | + | chr5.3:68480481-68480500 | MS.gene29756:CDS | 35.0% | |
| TGATGTTTGGTCATGATCTT+TGG | + | chr5.3:68479155-68479174 | MS.gene29756:intron | 35.0% | |
| TGTAAATTCTAGCGCACATA+GGG | + | chr5.3:68480703-68480722 | MS.gene29756:intron | 35.0% | |
| TGTACTTGACAACAATGTCT+TGG | - | chr5.3:68479945-68479964 | None:intergenic | 35.0% | |
| TTACTAAGTGAGTCGTCAAT+TGG | + | chr5.3:68478958-68478977 | MS.gene29756:CDS | 35.0% | |
| TTCAGGCGAAATTTATGCAT+TGG | + | chr5.3:68479517-68479536 | MS.gene29756:intron | 35.0% | |
| TTGTAAATTCTAGCGCACAT+AGG | + | chr5.3:68480702-68480721 | MS.gene29756:intron | 35.0% | |
| TTTGGTCATGATCTTTGGTT+TGG | + | chr5.3:68479160-68479179 | MS.gene29756:intron | 35.0% | |
| ! | AAAGCATCAAGAATCCTGTT+AGG | - | chr5.3:68478787-68478806 | None:intergenic | 35.0% |
| ! | AATTGAGATTGTTGCTTCTG+GGG | + | chr5.3:68477717-68477736 | MS.gene29756:CDS | 35.0% |
| ! | AGGATTCTTGATGCTTTTGA+AGG | + | chr5.3:68478790-68478809 | MS.gene29756:intron | 35.0% |
| ! | CAATTGGGTTTGAAACGAAT+GGG | + | chr5.3:68478974-68478993 | MS.gene29756:CDS | 35.0% |
| ! | CTTATTTCCATTAGCTCTCT+AGG | + | chr5.3:68480830-68480849 | MS.gene29756:intron | 35.0% |
| ! | GAATTGAGATTGTTGCTTCT+GGG | + | chr5.3:68477716-68477735 | MS.gene29756:CDS | 35.0% |
| ! | GGATTCTTGATGCTTTTGAA+GGG | + | chr5.3:68478791-68478810 | MS.gene29756:intron | 35.0% |
| ! | GGTTAGTTGTAATTTGAGCT+TGG | + | chr5.3:68477738-68477757 | MS.gene29756:CDS | 35.0% |
| ! | TCAATTGGGTTTGAAACGAA+TGG | + | chr5.3:68478973-68478992 | MS.gene29756:CDS | 35.0% |
| ! | TTGCGGTTTTTCTATTGGAT+TGG | + | chr5.3:68479307-68479326 | MS.gene29756:intron | 35.0% |
| !! | AAACCATGAATAATGGGCAA+GGG | - | chr5.3:68481141-68481160 | None:intergenic | 35.0% |
| !! | ATCACTGATTTAAGATCGGA+CGG | - | chr5.3:68478205-68478224 | None:intergenic | 35.0% |
| !! | ATCTTTGGTTTGGTTTGGTT+CGG | + | chr5.3:68479170-68479189 | MS.gene29756:intron | 35.0% |
| !! | ATGAATTATATGGGTTGGTG+TGG | + | chr5.3:68479900-68479919 | MS.gene29756:intron | 35.0% |
| !! | GATGCTTTTGAAGGGAATAT+TGG | + | chr5.3:68478799-68478818 | MS.gene29756:CDS | 35.0% |
| !! | TATTTGGTTTGGTCCTGTTA+AGG | + | chr5.3:68477783-68477802 | MS.gene29756:CDS | 35.0% |
| !! | TCATGATCTTTGGTTTGGTT+TGG | + | chr5.3:68479165-68479184 | MS.gene29756:intron | 35.0% |
| !!! | CATTTTGACTAAACAGTGTC+TGG | - | chr5.3:68480245-68480264 | None:intergenic | 35.0% |
| !!! | GATAAGTGCTGATTTTGGAA+AGG | + | chr5.3:68478508-68478527 | MS.gene29756:intron | 35.0% |
| !!! | TTTTTTAGATACCGGGAATC+TGG | + | chr5.3:68478318-68478337 | MS.gene29756:intron | 35.0% |
| AAACCGCAAAAAACCGCATT+TGG | - | chr5.3:68479268-68479287 | None:intergenic | 40.0% | |
| AAGAACTCTGGATCATGGTT+CGG | - | chr5.3:68479381-68479400 | None:intergenic | 40.0% | |
| AAGCTATCATACAGAACTCG+TGG | + | chr5.3:68478111-68478130 | MS.gene29756:intron | 40.0% | |
| AAGCTATCCTAGAGAGCTAA+TGG | - | chr5.3:68480840-68480859 | None:intergenic | 40.0% | |
| AATGCCTTCTCCAAGATTCT+TGG | - | chr5.3:68478848-68478867 | None:intergenic | 40.0% | |
| AGCCGAGCAATATCAATCAA+TGG | + | chr5.3:68478264-68478283 | MS.gene29756:intron | 40.0% | |
| ATCACCAAGAATCTTGGAGA+AGG | + | chr5.3:68478841-68478860 | MS.gene29756:CDS | 40.0% | |
| CAATCTCTATTGAACACTGC+AGG | + | chr5.3:68479561-68479580 | MS.gene29756:CDS | 40.0% | |
| CATCAAACAGACAAGAACTC+TGG | - | chr5.3:68479393-68479412 | None:intergenic | 40.0% | |
| CCTGTTAAGGTTTCTGATCA+AGG | + | chr5.3:68477796-68477815 | MS.gene29756:CDS | 40.0% | |
| CCTTGATCAGAAACCTTAAC+AGG | - | chr5.3:68477799-68477818 | None:intergenic | 40.0% | |
| CGAATGTTCCTTATTCAGGT+AGG | + | chr5.3:68480485-68480504 | MS.gene29756:intron | 40.0% | |
| GAATACATCCGAACCAAATG+CGG | + | chr5.3:68479252-68479271 | MS.gene29756:intron | 40.0% | |
| GAGATTTCAGATCAGAAAGC+AGG | + | chr5.3:68479672-68479691 | MS.gene29756:CDS | 40.0% | |
| GATCTCAAACTTAAGGACTG+TGG | + | chr5.3:68478587-68478606 | MS.gene29756:CDS | 40.0% | |
| GATTATCTCTGCGTCTTGTA+AGG | - | chr5.3:68481166-68481185 | None:intergenic | 40.0% | |
| GCAAAAAACCGCATTTGGTT+CGG | - | chr5.3:68479263-68479282 | None:intergenic | 40.0% | |
| GGGTATTTCCTGTACAATTG+AGG | - | chr5.3:68479603-68479622 | None:intergenic | 40.0% | |
| GTTCTTGTCTGTTTGATGTC+TGG | + | chr5.3:68479395-68479414 | MS.gene29756:intron | 40.0% | |
| TAAATTGGGATTGGAGAACC+AGG | + | chr5.3:68478553-68478572 | MS.gene29756:CDS | 40.0% | |
| TAGCATGCATCTCATTGGTA+GGG | + | chr5.3:68479754-68479773 | MS.gene29756:intron | 40.0% | |
| TGAGATCCAAATATCCTTCC+TGG | - | chr5.3:68478574-68478593 | None:intergenic | 40.0% | |
| TGTCTGTTTGATGTCTGGTT+CGG | + | chr5.3:68479400-68479419 | MS.gene29756:intron | 40.0% | |
| TTACCCTTGCCCATTATTCA+TGG | + | chr5.3:68481135-68481154 | MS.gene29756:CDS | 40.0% | |
| TTTGAAAAGTCTTCCGAAGG+AGG | + | chr5.3:68478885-68478904 | MS.gene29756:CDS | 40.0% | |
| ! | CCACTATTTTCTGCAATCTG+CGG | + | chr5.3:68480097-68480116 | MS.gene29756:intron | 40.0% |
| ! | GATGATTCAAGCTTCAGGTT+TGG | + | chr5.3:68480376-68480395 | MS.gene29756:intron | 40.0% |
| ! | GGAATTGAGATTGTTGCTTC+TGG | + | chr5.3:68477715-68477734 | MS.gene29756:CDS | 40.0% |
| ! | GGCCATTGATTGATATTGCT+CGG | - | chr5.3:68478269-68478288 | None:intergenic | 40.0% |
| ! | TGATCTGAAATCTCCACAAC+CGG | - | chr5.3:68479666-68479685 | None:intergenic | 40.0% |
| !! | ATCTTGGAGAAGGCATTACA+AGG | + | chr5.3:68478851-68478870 | MS.gene29756:CDS | 40.0% |
| !! | ATTTGGATTGGTTCGGTTTG+CGG | + | chr5.3:68479290-68479309 | MS.gene29756:intron | 40.0% |
| !! | GAAACCATGAATAATGGGCA+AGG | - | chr5.3:68481142-68481161 | None:intergenic | 40.0% |
| !! | GCTGATTTTGGAAAGGTTGA+AGG | + | chr5.3:68478515-68478534 | MS.gene29756:intron | 40.0% |
| !! | GTGCATCTTGGCTTTATCAA+GGG | + | chr5.3:68478648-68478667 | MS.gene29756:CDS | 40.0% |
| !! | TCGGTTTGCGGTTTTTCTAT+TGG | + | chr5.3:68479302-68479321 | MS.gene29756:intron | 40.0% |
| !! | TCTTGGCTTTATCAAGGGTA+TGG | + | chr5.3:68478653-68478672 | MS.gene29756:intron | 40.0% |
| !! | TTTTGGAAAGGTTGAAGGCA+TGG | + | chr5.3:68478520-68478539 | MS.gene29756:intron | 40.0% |
| !!! | GAACCAAATGCGGTTTTTTG+CGG | + | chr5.3:68479262-68479281 | MS.gene29756:intron | 40.0% |
| !!! | GTTTTGAGTTTTTGTGCCAG+AGG | - | chr5.3:68479038-68479057 | None:intergenic | 40.0% |
| AACGAAGAGTGATCATCGAC+CGG | - | chr5.3:68478913-68478932 | None:intergenic | 45.0% | |
| ACCAATGAGATGCATGCTAC+TGG | - | chr5.3:68479753-68479772 | None:intergenic | 45.0% | |
| ACCAGTAGCATGCATCTCAT+TGG | + | chr5.3:68479749-68479768 | MS.gene29756:CDS | 45.0% | |
| ACCATCAGATTGGGTGACTT+TGG | + | chr5.3:68480428-68480447 | MS.gene29756:CDS | 45.0% | |
| ATCTCAATTCCACTCTCACC+AGG | - | chr5.3:68477706-68477725 | None:intergenic | 45.0% | |
| ATTGTTAAGCCTGGTGAGAG+TGG | + | chr5.3:68477694-68477713 | MS.gene29756:CDS | 45.0% | |
| CAGACAAGAACTCTGGATCA+TGG | - | chr5.3:68479386-68479405 | None:intergenic | 45.0% | |
| CCACAGATGATTCAAGCTTC+AGG | + | chr5.3:68480371-68480390 | MS.gene29756:intron | 45.0% | |
| CCGCAGATTGCAGAAAATAG+TGG | - | chr5.3:68480100-68480119 | None:intergenic | 45.0% | |
| CCTGAAGCTTGAATCATCTG+TGG | - | chr5.3:68480374-68480393 | None:intergenic | 45.0% | |
| CTCGTAGGTACCATCAGATT+GGG | + | chr5.3:68480419-68480438 | MS.gene29756:CDS | 45.0% | |
| CTCTATTGAACACTGCAGGA+TGG | + | chr5.3:68479565-68479584 | MS.gene29756:CDS | 45.0% | |
| GCTAGCAATCACTTTAGACG+AGG | + | chr5.3:68479089-68479108 | MS.gene29756:CDS | 45.0% | |
| GGAGAACCAGGAAGGATATT+TGG | + | chr5.3:68478565-68478584 | MS.gene29756:CDS | 45.0% | |
| GTAGCATGCATCTCATTGGT+AGG | + | chr5.3:68479753-68479772 | MS.gene29756:intron | 45.0% | |
| TACTATGGCGCTACAATAGC+CGG | - | chr5.3:68480052-68480071 | None:intergenic | 45.0% | |
| TCAAGGTTCAGCACAAGTTC+AGG | + | chr5.3:68477813-68477832 | MS.gene29756:CDS | 45.0% | |
| TCCAAAGTCACCCAATCTGA+TGG | - | chr5.3:68480432-68480451 | None:intergenic | 45.0% | |
| TTGTGCCAGAGGTTAGGAAT+AGG | - | chr5.3:68479027-68479046 | None:intergenic | 45.0% | |
| ! | AATTGGATGGTGGTGCATCT+TGG | + | chr5.3:68478636-68478655 | MS.gene29756:CDS | 45.0% |
| ! | GAGTTTTTGTGCCAGAGGTT+AGG | - | chr5.3:68479033-68479052 | None:intergenic | 45.0% |
| ! | TTTTCCTGCAGCCAGTTATG+TGG | + | chr5.3:68481058-68481077 | MS.gene29756:intron | 45.0% |
| !! | GGTGCATCTTGGCTTTATCA+AGG | + | chr5.3:68478647-68478666 | MS.gene29756:CDS | 45.0% |
| !! | TTCAACTGCATGGTTCGGTT+CGG | - | chr5.3:68479218-68479237 | None:intergenic | 45.0% |
| !! | TTGGTTTGGTTTGGTTCGGT+TGG | + | chr5.3:68479174-68479193 | MS.gene29756:intron | 45.0% |
| AAGTCTTCCGAAGGAGGTTC+CGG | + | chr5.3:68478891-68478910 | MS.gene29756:CDS | 50.0% | |
| ACTATAGCGCTACAACGCAG+CGG | + | chr5.3:68479966-68479985 | MS.gene29756:intron | 50.0% | |
| CCAATCTGATGGTACCTACG+AGG | - | chr5.3:68480421-68480440 | None:intergenic | 50.0% | |
| CCAGAGGTTAGGAATAGGCA+GGG | - | chr5.3:68479022-68479041 | None:intergenic | 50.0% | |
| CCTCGTAGGTACCATCAGAT+TGG | + | chr5.3:68480418-68480437 | MS.gene29756:CDS | 50.0% | |
| TTGGGATTGGAGAACCAGGA+AGG | + | chr5.3:68478557-68478576 | MS.gene29756:CDS | 50.0% | |
| TTGGTAGGGATCCAGATTCC+CGG | - | chr5.3:68478332-68478351 | None:intergenic | 50.0% | |
| TTGTCCACATAACTGGCTGC+AGG | - | chr5.3:68481065-68481084 | None:intergenic | 50.0% | |
| TTTGTCATCTCCTCCGGTTG+TGG | + | chr5.3:68479650-68479669 | MS.gene29756:CDS | 50.0% | |
| ! | TCTGAAATCTCCACAACCGG+AGG | - | chr5.3:68479663-68479682 | None:intergenic | 50.0% |
| CCCTGCCTATTCCTAACCTC+TGG | + | chr5.3:68479019-68479038 | MS.gene29756:CDS | 55.0% | |
| GCCAGAGGTTAGGAATAGGC+AGG | - | chr5.3:68479023-68479042 | None:intergenic | 55.0% | |
| TCATCGACCGGAACCTCCTT+CGG | - | chr5.3:68478901-68478920 | None:intergenic | 55.0% | |
| !! | GCATGGTTCGGTTCGGTTTG+CGG | - | chr5.3:68479211-68479230 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 68477628 | 68481263 | 68477628 | ID=MS.gene29756 |
| chr5.3 | mRNA | 68477628 | 68481263 | 68477628 | ID=MS.gene29756.t1;Parent=MS.gene29756 |
| chr5.3 | exon | 68477628 | 68477834 | 68477628 | ID=MS.gene29756.t1.exon1;Parent=MS.gene29756.t1 |
| chr5.3 | CDS | 68477628 | 68477834 | 68477628 | ID=cds.MS.gene29756.t1;Parent=MS.gene29756.t1 |
| chr5.3 | exon | 68478530 | 68478669 | 68478530 | ID=MS.gene29756.t1.exon2;Parent=MS.gene29756.t1 |
| chr5.3 | CDS | 68478530 | 68478669 | 68478530 | ID=cds.MS.gene29756.t1;Parent=MS.gene29756.t1 |
| chr5.3 | exon | 68478792 | 68479146 | 68478792 | ID=MS.gene29756.t1.exon3;Parent=MS.gene29756.t1 |
| chr5.3 | CDS | 68478792 | 68479146 | 68478792 | ID=cds.MS.gene29756.t1;Parent=MS.gene29756.t1 |
| chr5.3 | exon | 68479522 | 68479770 | 68479522 | ID=MS.gene29756.t1.exon4;Parent=MS.gene29756.t1 |
| chr5.3 | CDS | 68479522 | 68479770 | 68479522 | ID=cds.MS.gene29756.t1;Parent=MS.gene29756.t1 |
| chr5.3 | exon | 68480377 | 68480502 | 68480377 | ID=MS.gene29756.t1.exon5;Parent=MS.gene29756.t1 |
| chr5.3 | CDS | 68480377 | 68480502 | 68480377 | ID=cds.MS.gene29756.t1;Parent=MS.gene29756.t1 |
| chr5.3 | exon | 68481069 | 68481263 | 68481069 | ID=MS.gene29756.t1.exon6;Parent=MS.gene29756.t1 |
| chr5.3 | CDS | 68481069 | 68481263 | 68481069 | ID=cds.MS.gene29756.t1;Parent=MS.gene29756.t1 |
| Gene Sequence |
| Protein sequence |
