AlfalfaGEDB | MS.gene059382

M. sativa cultivar XinJiangDaYe / MS.gene059382

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059382.t1	KEH26227.1	86	100	12	1	1	100	1	98	1.00E-38	170.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059382.t1	A0A072U992	86.0	100	12	1	1	100	1	98	7.4e-39	170.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049669	MS.gene059382	0.803916	2.77E-49	-1.69E-46
MS.gene050026	MS.gene059382	0.805439	1.33E-49	-1.69E-46
MS.gene050226	MS.gene059382	0.802564	5.28E-49	-1.69E-46
MS.gene050227	MS.gene059382	0.80546	1.32E-49	-1.69E-46
MS.gene050228	MS.gene059382	0.805418	1.35E-49	-1.69E-46
MS.gene050680	MS.gene059382	0.808597	2.86E-50	-1.69E-46
MS.gene050750	MS.gene059382	0.81885	1.58E-52	-1.69E-46
MS.gene050953	MS.gene059382	0.82691	2.09E-54	-1.69E-46
MS.gene052867	MS.gene059382	0.836379	9.69E-57	-1.69E-46
MS.gene05414	MS.gene059382	0.801683	8.02E-49	-1.69E-46
MS.gene05415	MS.gene059382	0.821712	3.49E-53	-1.69E-46
MS.gene054160	MS.gene059382	0.876914	9.56E-69	-1.69E-46
MS.gene054291	MS.gene059382	-0.805749	1.15E-49	-1.69E-46
MS.gene054405	MS.gene059382	0.822802	1.95E-53	-1.69E-46
MS.gene054658	MS.gene059382	0.806162	9.40E-50	-1.69E-46
MS.gene055227	MS.gene059382	0.801608	8.31E-49	-1.69E-46
MS.gene055356	MS.gene059382	0.802968	4.36E-49	-1.69E-46
MS.gene055701	MS.gene059382	0.825441	4.68E-54	-1.69E-46
MS.gene055818	MS.gene059382	0.826885	2.12E-54	-1.69E-46
MS.gene056506	MS.gene059382	0.822872	1.88E-53	-1.69E-46
MS.gene058146	MS.gene059382	0.8113	7.50E-51	-1.69E-46
MS.gene058979	MS.gene059382	0.823501	1.34E-53	-1.69E-46
MS.gene059382	MS.gene060683	0.809944	1.47E-50	-1.69E-46
MS.gene059382	MS.gene060685	0.813686	2.26E-51	-1.69E-46
MS.gene059382	MS.gene060998	0.811486	6.83E-51	-1.69E-46
MS.gene059382	MS.gene061333	0.804648	1.95E-49	-1.69E-46
MS.gene059382	MS.gene06269	0.800962	1.13E-48	-1.69E-46
MS.gene059382	MS.gene065904	0.800801	1.22E-48	-1.69E-46
MS.gene059382	MS.gene066320	0.811795	5.86E-51	-1.69E-46
MS.gene059382	MS.gene067151	0.806973	6.34E-50	-1.69E-46
MS.gene059382	MS.gene067173	0.804042	2.61E-49	-1.69E-46
MS.gene059382	MS.gene068385	0.821481	3.95E-53	-1.69E-46
MS.gene059382	MS.gene068526	0.815048	1.13E-51	-1.69E-46
MS.gene059382	MS.gene068924	0.803876	2.83E-49	-1.69E-46
MS.gene059382	MS.gene06927	0.804484	2.11E-49	-1.69E-46
MS.gene059382	MS.gene071059	0.827831	1.26E-54	-1.69E-46
MS.gene059382	MS.gene071441	0.808255	3.39E-50	-1.69E-46
MS.gene059382	MS.gene071442	0.829642	4.59E-55	-1.69E-46
MS.gene059382	MS.gene071444	0.81861	1.79E-52	-1.69E-46
MS.gene059382	MS.gene072677	0.830896	2.27E-55	-1.69E-46
MS.gene059382	MS.gene073008	0.814603	1.42E-51	-1.69E-46
MS.gene059382	MS.gene07344	0.823673	1.22E-53	-1.69E-46
MS.gene059382	MS.gene073460	0.800514	1.39E-48	-1.69E-46
MS.gene059382	MS.gene073853	0.81353	2.44E-51	-1.69E-46
MS.gene059382	MS.gene09952	0.807519	4.86E-50	-1.69E-46
MS.gene059382	MS.gene20184	0.81347	2.52E-51	-1.69E-46
MS.gene059382	MS.gene20809	0.815394	9.46E-52	-1.69E-46
MS.gene059382	MS.gene22311	-0.810947	8.95E-51	-1.69E-46
MS.gene059382	MS.gene22731	0.809682	1.68E-50	-1.69E-46
MS.gene059382	MS.gene24067	0.812289	4.57E-51	-1.69E-46
MS.gene059382	MS.gene25151	0.803511	3.37E-49	-1.69E-46
MS.gene059382	MS.gene27008	0.808934	2.43E-50	-1.69E-46
MS.gene059382	MS.gene27775	0.804953	1.69E-49	-1.69E-46
MS.gene059382	MS.gene28498	0.818312	2.09E-52	-1.69E-46
MS.gene059382	MS.gene28659	0.807512	4.88E-50	-1.69E-46
MS.gene059382	MS.gene29000	0.803006	4.28E-49	-1.69E-46
MS.gene059382	MS.gene29756	0.834537	2.83E-56	-1.69E-46
MS.gene059382	MS.gene30706	0.976286	1.55E-141	-1.69E-46
MS.gene059382	MS.gene31283	0.827935	1.19E-54	-1.69E-46
MS.gene059382	MS.gene32231	0.813586	2.37E-51	-1.69E-46
MS.gene059382	MS.gene32874	0.809141	2.19E-50	-1.69E-46
MS.gene059382	MS.gene33127	-0.80127	9.74E-49	-1.69E-46
MS.gene059382	MS.gene34667	0.800859	1.18E-48	-1.69E-46
MS.gene059382	MS.gene35408	0.843008	1.82E-58	-1.69E-46
MS.gene059382	MS.gene38381	0.801763	7.72E-49	-1.69E-46
MS.gene059382	MS.gene41121	0.824313	8.64E-54	-1.69E-46
MS.gene059382	MS.gene43040	0.803903	2.79E-49	-1.69E-46
MS.gene059382	MS.gene43973	0.800188	1.62E-48	-1.69E-46
MS.gene059382	MS.gene44461	0.803109	4.08E-49	-1.69E-46
MS.gene059382	MS.gene44603	0.819694	1.02E-52	-1.69E-46
MS.gene059382	MS.gene45405	0.800887	1.17E-48	-1.69E-46
MS.gene059382	MS.gene48704	0.807995	3.85E-50	-1.69E-46
MS.gene059382	MS.gene49940	0.802989	4.32E-49	-1.69E-46
MS.gene059382	MS.gene52059	0.812535	4.04E-51	-1.69E-46
MS.gene059382	MS.gene52061	0.819282	1.26E-52	-1.69E-46
MS.gene059382	MS.gene52448	0.803643	3.16E-49	-1.69E-46
MS.gene059382	MS.gene52525	0.821772	3.38E-53	-1.69E-46
MS.gene059382	MS.gene53586	0.804746	1.86E-49	-1.69E-46
MS.gene059382	MS.gene53924	0.818626	1.78E-52	-1.69E-46
MS.gene059382	MS.gene53955	0.842801	2.07E-58	-1.69E-46
MS.gene059382	MS.gene56004	0.802749	4.84E-49	-1.69E-46
MS.gene059382	MS.gene56227	0.804316	2.29E-49	-1.69E-46
MS.gene059382	MS.gene56431	0.807932	3.97E-50	-1.69E-46
MS.gene059382	MS.gene59840	0.800183	1.62E-48	-1.69E-46
MS.gene059382	MS.gene60204	0.817335	3.48E-52	-1.69E-46
MS.gene059382	MS.gene60206	0.820072	8.32E-53	-1.69E-46
MS.gene059382	MS.gene61139	0.823027	1.73E-53	-1.69E-46
MS.gene059382	MS.gene62331	0.802159	6.40E-49	-1.69E-46
MS.gene059382	MS.gene63058	0.82792	1.20E-54	-1.69E-46
MS.gene059382	MS.gene63412	0.836084	1.15E-56	-1.69E-46
MS.gene059382	MS.gene64249	0.806336	8.64E-50	-1.69E-46
MS.gene059382	MS.gene67117	0.805931	1.05E-49	-1.69E-46
MS.gene059382	MS.gene67152	0.817031	4.07E-52	-1.69E-46
MS.gene059382	MS.gene69794	0.824144	9.46E-54	-1.69E-46
MS.gene059382	MS.gene70534	0.822959	1.79E-53	-1.69E-46
MS.gene059382	MS.gene71871	0.812275	4.60E-51	-1.69E-46
MS.gene059382	MS.gene72268	0.809782	1.60E-50	-1.69E-46
MS.gene059382	MS.gene73596	0.829644	4.59E-55	-1.69E-46
MS.gene059382	MS.gene73820	0.814168	1.77E-51	-1.69E-46
MS.gene059382	MS.gene76356	0.823603	1.27E-53	-1.69E-46
MS.gene059382	MS.gene77015	0.800469	1.42E-48	-1.69E-46
MS.gene059382	MS.gene77371	0.812075	5.09E-51	-1.69E-46
MS.gene059382	MS.gene77579	0.800587	1.34E-48	-1.69E-46
MS.gene059382	MS.gene77781	0.809174	2.16E-50	-1.69E-46
MS.gene059382	MS.gene78234	0.822533	2.25E-53	-1.69E-46
MS.gene059382	MS.gene80770	0.818381	2.02E-52	-1.69E-46
MS.gene059382	MS.gene82699	0.801393	9.20E-49	-1.69E-46
MS.gene059382	MS.gene83734	0.810036	1.41E-50	-1.69E-46
MS.gene059382	MS.gene84326	0.833087	6.52E-56	-1.69E-46
MS.gene059382	MS.gene84931	0.805341	1.40E-49	-1.69E-46
MS.gene059382	MS.gene87697	0.802495	5.46E-49	-1.69E-46
MS.gene059382	MS.gene88091	0.812921	3.32E-51	-1.69E-46
MS.gene059382	MS.gene88112	0.810587	1.07E-50	-1.69E-46
MS.gene059382	MS.gene90022	0.802527	5.38E-49	-1.69E-46
MS.gene059382	MS.gene91676	0.813011	3.18E-51	-1.69E-46
MS.gene059382	MS.gene91907	0.801267	9.76E-49	-1.69E-46
MS.gene059382	MS.gene93041	0.810895	9.18E-51	-1.69E-46
MS.gene059382	MS.gene93764	0.80664	7.46E-50	-1.69E-46
MS.gene059382	MS.gene97534	0.80805	3.75E-50	-1.69E-46
MS.gene059382	MS.gene98087	0.814237	1.71E-51	-1.69E-46
MS.gene059382	MS.gene98088	0.805572	1.25E-49	-1.69E-46
MS.gene059382	MS.gene99746	0.814522	1.48E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059382.t1	MTR_6g048070	86.000	100	12	1	1	100	1	98	1.01e-53	168
MS.gene059382.t1	MTR_6g013220	39.610	154	65	2	93	218	55	208	1.54e-25	99.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 53 sgRNAs with CRISPR-Local

Find 65 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAAATGCTTTGAAAATTTA+TGG	0.103412	6.3:-42890715	None:intergenic
AGGAATTATTATGAATATTT+TGG	0.109615	6.3:+42890157	None:intergenic
ACCAAGAGCCATCTCTTATT+TGG	0.186353	6.3:-42890491	None:intergenic
CCATACGCCCGTTTGTTCTT+AGG	0.263802	6.3:+42890276	MS.gene059382:CDS
CTCACTGAGGAAACGGTTAA+AGG	0.312213	6.3:+42890344	MS.gene059382:CDS
GGATTACTTGGTTTGGAAAC+AGG	0.343584	6.3:+42890195	MS.gene059382:CDS
GAAGACAATTTCAAATCCTT+TGG	0.353154	6.3:+42890622	MS.gene059382:CDS
GTCACACGGATTACTTGGTT+TGG	0.363011	6.3:+42890188	MS.gene059382:CDS
GTTCGGAAATGGTTGGGATC+AGG	0.375886	6.3:+42890740	MS.gene059382:CDS
TTCAAATCCTTTGGTGGTGA+TGG	0.384513	6.3:+42890631	MS.gene059382:CDS
GTAAAGAGAGAGATAATTTA+CGG	0.394352	6.3:+42890579	MS.gene059382:CDS
ACTTGGTTTGGAAACAGGTT+GGG	0.398496	6.3:+42890200	MS.gene059382:CDS
GTCTACAAAATACTCAAAAT+CGG	0.406722	6.3:-42890693	None:intergenic
TGAATGTCACACGGATTACT+TGG	0.411945	6.3:+42890183	MS.gene059382:CDS
GGGTTGATTCGGTTAGGACC+AGG	0.413078	6.3:+42890221	MS.gene059382:CDS
ACCAAATAAGAGATGGCTCT+TGG	0.414703	6.3:+42890490	MS.gene059382:CDS
TCCACCAATCCCATCACAAC+TGG	0.419830	6.3:-42890305	None:intergenic
GAAACAGGTTGGGGTTGATT+CGG	0.433871	6.3:+42890210	MS.gene059382:CDS
TTTAAGGTTCGGAAATGGTT+GGG	0.445226	6.3:+42890734	MS.gene059382:CDS
GGAGTGATTTGCTGAACTTA+AGG	0.461995	6.3:+42890600	MS.gene059382:CDS
GACAATTTCAAATCCTTTGG+TGG	0.464703	6.3:+42890625	MS.gene059382:CDS
GGATTATACCTAAGAACAAA+CGG	0.466483	6.3:-42890284	None:intergenic
AAGAGATGGCTCTTGGTTGA+AGG	0.467671	6.3:+42890497	MS.gene059382:CDS
TCATAACAATGAAGCACTAA+AGG	0.476464	6.3:-42890785	None:intergenic
CATAACAATGAAGCACTAAA+GGG	0.476728	6.3:-42890784	None:intergenic
AGGTTGGGGTTGATTCGGTT+AGG	0.490838	6.3:+42890215	MS.gene059382:CDS
TCAAATCCTTTGGTGGTGAT+GGG	0.493046	6.3:+42890632	MS.gene059382:CDS
AGAAGGAAGACAATTTAAGC+TGG	0.499740	6.3:+42890375	MS.gene059382:CDS
TAGGTATAATCCAGTTGTGA+TGG	0.501054	6.3:+42890295	MS.gene059382:CDS
CTTGGTTTGGAAACAGGTTG+GGG	0.501383	6.3:+42890201	MS.gene059382:CDS
TACTTGGTTTGGAAACAGGT+TGG	0.506523	6.3:+42890199	MS.gene059382:CDS
TTCGGAAATGGTTGGGATCA+GGG	0.508284	6.3:+42890741	MS.gene059382:CDS
TCTCTCTCTTTACGACAACT+TGG	0.508403	6.3:-42890569	None:intergenic
GGGGAAAGTATTACTCAGTC+AGG	0.520760	6.3:+42890242	MS.gene059382:CDS
TTCGAAGCTCACTGAGGAAA+CGG	0.521223	6.3:+42890337	MS.gene059382:CDS
CCTAAGAACAAACGGGCGTA+TGG	0.530528	6.3:-42890276	None:intergenic
GGTTAAAGGATGTTTGAAGA+AGG	0.530922	6.3:+42890358	MS.gene059382:CDS
TCCAGTTGTGATGGGATTGG+TGG	0.539138	6.3:+42890304	MS.gene059382:CDS
AGGTATAATCCAGTTGTGAT+GGG	0.541100	6.3:+42890296	MS.gene059382:CDS
GATTATACCTAAGAACAAAC+GGG	0.541259	6.3:-42890283	None:intergenic
TTCAAAGACAAGAAAAGTGG+GGG	0.560074	6.3:+42890419	MS.gene059382:CDS
GGATCAGGGAGAGTCCGCTC+AGG	0.570190	6.3:+42890755	MS.gene059382:CDS
AACTTACCCATCACCACCAA+AGG	0.574656	6.3:-42890638	None:intergenic
GTTGATTCGGTTAGGACCAG+GGG	0.579094	6.3:+42890223	MS.gene059382:CDS
GGTTGATTCGGTTAGGACCA+GGG	0.584355	6.3:+42890222	MS.gene059382:CDS
GAAGGAAGACAATTTAAGCT+GGG	0.584879	6.3:+42890376	MS.gene059382:CDS
GACTGAGTAATACTTTCCCC+TGG	0.585428	6.3:-42890239	None:intergenic
AAACTTTACCAAATAAGAGA+TGG	0.585590	6.3:+42890483	MS.gene059382:CDS
TAATCCAGTTGTGATGGGAT+TGG	0.599371	6.3:+42890301	MS.gene059382:CDS
TTTCAAAGACAAGAAAAGTG+GGG	0.614665	6.3:+42890418	MS.gene059382:CDS
AACGGGCGTATGGACTGTGA+TGG	0.658353	6.3:-42890266	None:intergenic
CTAAAGGGCGCTGACCTGAG+CGG	0.669360	6.3:-42890769	None:intergenic
AAGACGTTCGAAGCTCACTG+AGG	0.781877	6.3:+42890331	MS.gene059382:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAAATGCTTTGAAAATTTA+TGG	-	chr6.3:42890718-42890737	None:intergenic	15.0%
!!!	TAAATTTTCAAAGCATTTTA+AGG	+	chr6.3:42890718-42890737	MS.gene059382:CDS	15.0%
!!!	TTGTCTTTGAAAAATGATTT+TGG	-	chr6.3:42890410-42890429	None:intergenic	20.0%
!	AAACTTTACCAAATAAGAGA+TGG	+	chr6.3:42890483-42890502	MS.gene059382:CDS	25.0%
!	GTAAAGAGAGAGATAATTTA+CGG	+	chr6.3:42890579-42890598	MS.gene059382:CDS	25.0%
!	GTCTACAAAATACTCAAAAT+CGG	-	chr6.3:42890696-42890715	None:intergenic	25.0%
!!	TATTGATGTGTCTTTTCTTT+TGG	+	chr6.3:42890538-42890557	MS.gene059382:CDS	25.0%
!!	TTTTCAAAGACAAGAAAAGT+GGG	+	chr6.3:42890417-42890436	MS.gene059382:CDS	25.0%
!!!	TTTCAAAGCATTTTAAGGTT+CGG	+	chr6.3:42890723-42890742	MS.gene059382:CDS	25.0%
!!!	TTTTTCAAAGACAAGAAAAG+TGG	+	chr6.3:42890416-42890435	MS.gene059382:CDS	25.0%
	GAAGACAATTTCAAATCCTT+TGG	+	chr6.3:42890622-42890641	MS.gene059382:CDS	30.0%
	GATTATACCTAAGAACAAAC+GGG	-	chr6.3:42890286-42890305	None:intergenic	30.0%
	GGATTATACCTAAGAACAAA+CGG	-	chr6.3:42890287-42890306	None:intergenic	30.0%
	TTTCAAAGACAAGAAAAGTG+GGG	+	chr6.3:42890418-42890437	MS.gene059382:CDS	30.0%
!	CATAACAATGAAGCACTAAA+GGG	-	chr6.3:42890787-42890806	None:intergenic	30.0%
!	TCATAACAATGAAGCACTAA+AGG	-	chr6.3:42890788-42890807	None:intergenic	30.0%
!!	AAAATCGGCTTCTTTTTCTT+CGG	-	chr6.3:42890681-42890700	None:intergenic	30.0%
	AGAAGGAAGACAATTTAAGC+TGG	+	chr6.3:42890375-42890394	MS.gene059382:CDS	35.0%
	AGGTATAATCCAGTTGTGAT+GGG	+	chr6.3:42890296-42890315	MS.gene059382:CDS	35.0%
	GAAGGAAGACAATTTAAGCT+GGG	+	chr6.3:42890376-42890395	MS.gene059382:CDS	35.0%
	GACAATTTCAAATCCTTTGG+TGG	+	chr6.3:42890625-42890644	MS.gene059382:CDS	35.0%
	GGTTAAAGGATGTTTGAAGA+AGG	+	chr6.3:42890358-42890377	MS.gene059382:CDS	35.0%
	TAGGTATAATCCAGTTGTGA+TGG	+	chr6.3:42890295-42890314	MS.gene059382:CDS	35.0%
	TTCAAAGACAAGAAAAGTGG+GGG	+	chr6.3:42890419-42890438	MS.gene059382:CDS	35.0%
!	TTTAAGGTTCGGAAATGGTT+GGG	+	chr6.3:42890734-42890753	MS.gene059382:CDS	35.0%
!!!	AGCATTTTAAGGTTCGGAAA+TGG	+	chr6.3:42890729-42890748	MS.gene059382:CDS	35.0%
!!!	GTGATGGGTAAGTTTTATGA+TGG	+	chr6.3:42890647-42890666	MS.gene059382:CDS	35.0%
!!!	TTTTAAGGTTCGGAAATGGT+TGG	+	chr6.3:42890733-42890752	MS.gene059382:CDS	35.0%
!!!	TTTTGGGTTTGAATGTCACA+CGG	+	chr6.3:42890174-42890193	MS.gene059382:CDS	35.0%
	ACCAAATAAGAGATGGCTCT+TGG	+	chr6.3:42890490-42890509	MS.gene059382:CDS	40.0%
	ACCAAGAGCCATCTCTTATT+TGG	-	chr6.3:42890494-42890513	None:intergenic	40.0%
	TCTCTCTCTTTACGACAACT+TGG	-	chr6.3:42890572-42890591	None:intergenic	40.0%
!	TAATCCAGTTGTGATGGGAT+TGG	+	chr6.3:42890301-42890320	MS.gene059382:CDS	40.0%
!	TGAATGTCACACGGATTACT+TGG	+	chr6.3:42890183-42890202	MS.gene059382:CDS	40.0%
!!	ACTTGGTTTGGAAACAGGTT+GGG	+	chr6.3:42890200-42890219	MS.gene059382:CDS	40.0%
!!	GGAGTGATTTGCTGAACTTA+AGG	+	chr6.3:42890600-42890619	MS.gene059382:CDS	40.0%
!!	GGATTACTTGGTTTGGAAAC+AGG	+	chr6.3:42890195-42890214	MS.gene059382:CDS	40.0%
!!	TACTTGGTTTGGAAACAGGT+TGG	+	chr6.3:42890199-42890218	MS.gene059382:CDS	40.0%
!!	TCAAATCCTTTGGTGGTGAT+GGG	+	chr6.3:42890632-42890651	MS.gene059382:CDS	40.0%
!!	TTCAAATCCTTTGGTGGTGA+TGG	+	chr6.3:42890631-42890650	MS.gene059382:CDS	40.0%
	AACTTACCCATCACCACCAA+AGG	-	chr6.3:42890641-42890660	None:intergenic	45.0%
	AAGAGATGGCTCTTGGTTGA+AGG	+	chr6.3:42890497-42890516	MS.gene059382:CDS	45.0%
	CTCACTGAGGAAACGGTTAA+AGG	+	chr6.3:42890344-42890363	MS.gene059382:CDS	45.0%
	GACTGAGTAATACTTTCCCC+TGG	-	chr6.3:42890242-42890261	None:intergenic	45.0%
	TTCGAAGCTCACTGAGGAAA+CGG	+	chr6.3:42890337-42890356	MS.gene059382:CDS	45.0%
	TTCGGAAATGGTTGGGATCA+GGG	+	chr6.3:42890741-42890760	MS.gene059382:CDS	45.0%
!	GAAACAGGTTGGGGTTGATT+CGG	+	chr6.3:42890210-42890229	MS.gene059382:CDS	45.0%
!	GTCACACGGATTACTTGGTT+TGG	+	chr6.3:42890188-42890207	MS.gene059382:CDS	45.0%
!	TCGGCTTCTTTTTCTTCGGA+TGG	-	chr6.3:42890677-42890696	None:intergenic	45.0%
!!	CTTGGTTTGGAAACAGGTTG+GGG	+	chr6.3:42890201-42890220	MS.gene059382:CDS	45.0%
!!	GGGGAAAGTATTACTCAGTC+AGG	+	chr6.3:42890242-42890261	MS.gene059382:CDS	45.0%
	AAGACGTTCGAAGCTCACTG+AGG	+	chr6.3:42890331-42890350	MS.gene059382:CDS	50.0%
	CCATACGCCCGTTTGTTCTT+AGG	+	chr6.3:42890276-42890295	MS.gene059382:CDS	50.0%
	CCTAAGAACAAACGGGCGTA+TGG	-	chr6.3:42890279-42890298	None:intergenic	50.0%
	GTTCGGAAATGGTTGGGATC+AGG	+	chr6.3:42890740-42890759	MS.gene059382:CDS	50.0%
	TCCACCAATCCCATCACAAC+TGG	-	chr6.3:42890308-42890327	None:intergenic	50.0%
!	TCCAGTTGTGATGGGATTGG+TGG	+	chr6.3:42890304-42890323	MS.gene059382:CDS	50.0%
!!	AGGTTGGGGTTGATTCGGTT+AGG	+	chr6.3:42890215-42890234	MS.gene059382:CDS	50.0%
!!	GGTTGATTCGGTTAGGACCA+GGG	+	chr6.3:42890222-42890241	MS.gene059382:CDS	50.0%
!!	GTTGATTCGGTTAGGACCAG+GGG	+	chr6.3:42890223-42890242	MS.gene059382:CDS	50.0%
!	AACGGGCGTATGGACTGTGA+TGG	-	chr6.3:42890269-42890288	None:intergenic	55.0%
!!	GGGTTGATTCGGTTAGGACC+AGG	+	chr6.3:42890221-42890240	MS.gene059382:CDS	55.0%
	GTGGGGGAATCATGTTCGCG+TGG	+	chr6.3:42890435-42890454	MS.gene059382:CDS	60.0%
!!	CTAAAGGGCGCTGACCTGAG+CGG	-	chr6.3:42890772-42890791	None:intergenic	60.0%
	GGATCAGGGAGAGTCCGCTC+AGG	+	chr6.3:42890755-42890774	MS.gene059382:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	42890167	42890823	42890167	ID=MS.gene059382
chr6.3	mRNA	42890167	42890823	42890167	ID=MS.gene059382.t1;Parent=MS.gene059382
chr6.3	exon	42890167	42890823	42890167	ID=MS.gene059382.t1.exon1;Parent=MS.gene059382.t1
chr6.3	CDS	42890167	42890823	42890167	ID=cds.MS.gene059382.t1;Parent=MS.gene059382.t1

Gene Sequence

>MS.gene059382

ATGAATATTTTGGGTTTGAATGTCACACGGATTACTTGGTTTGGAAACAGGTTGGGGTTGATTCGGTTAGGACCAGGGGAAAGTATTACTCAGTCAGGACCATCACAGTCCATACGCCCGTTTGTTCTTAGGTATAATCCAGTTGTGATGGGATTGGTGGATACAAGACGTTCGAAGCTCACTGAGGAAACGGTTAAAGGATGTTTGAAGAAGGAAGACAATTTAAGCTGGGTAGATGTTCCAAAATCATTTTTCAAAGACAAGAAAAGTGGGGGAATCATGTTCGCGTGGAATGAACTTTATTTTACGATATCAAAAACTTTACCAAATAAGAGATGGCTCTTGGTTGAAGGTAATTTGATAAAAGAACGTATTGATGTGTCTTTTCTTTTGGTTTCTGAACCAAGTTGTCGTAAAGAGAGAGATAATTTACGGAGTGATTTGCTGAACTTAAGGAAGACAATTTCAAATCCTTTGGTGGTGATGGGTAAGTTTTATGATGGTGTACCATCCGAAGAAAAAGAAGCCGATTTTGAGTATTTTGTAGACCATAAATTTTCAAAGCATTTTAAGGTTCGGAAATGGTTGGGATCAGGGAGAGTCCGCTCAGGTCAGCGCCCTTTAGTGCTTCATTGTTATGAACAAGATGATATTTGA

Protein sequence

>MS.gene059382.t1

MNILGLNVTRITWFGNRLGLIRLGPGESITQSGPSQSIRPFVLRYNPVVMGLVDTRRSKLTEETVKGCLKKEDNLSWVDVPKSFFKDKKSGGIMFAWNELYFTISKTLPNKRWLLVEGNLIKERIDVSFLLVSEPSCRKERDNLRSDLLNLRKTISNPLVVMGKFYDGVPSEEKEADFEYFVDHKFSKHFKVRKWLGSGRVRSGQRPLVLHCYEQDDI