Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29850.t1 | AAB42144.1 | 84.6 | 898 | 88 | 3 | 1 | 857 | 1354 | 2242 | 0.00E+00 | 1488.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29850.t1 | Q38970 | 66.0 | 897 | 254 | 4 | 1 | 856 | 1352 | 2238 | 0.0e+00 | 1183.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29850.t1 | Q40326 | 84.6 | 898 | 88 | 3 | 1 | 857 | 1354 | 2242 | 0.0e+00 | 1488.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene29850 | 0.80958 | 1.76E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene29850 | 0.818213 | 2.20E-52 | -1.69E-46 |
| MS.gene049452 | MS.gene29850 | 0.801742 | 7.80E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene29850 | 0.825195 | 5.35E-54 | -1.69E-46 |
| MS.gene050273 | MS.gene29850 | 0.806357 | 8.55E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene29850 | 0.804647 | 1.95E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene29850 | 0.804315 | 2.29E-49 | -1.69E-46 |
| MS.gene050562 | MS.gene29850 | 0.80335 | 3.64E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene29850 | 0.835706 | 1.44E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene29850 | 0.845376 | 4.22E-59 | -1.69E-46 |
| MS.gene051744 | MS.gene29850 | 0.803316 | 3.70E-49 | -1.69E-46 |
| MS.gene052037 | MS.gene29850 | 0.809714 | 1.65E-50 | -1.69E-46 |
| MS.gene052447 | MS.gene29850 | 0.800411 | 1.46E-48 | -1.69E-46 |
| MS.gene052534 | MS.gene29850 | 0.806116 | 9.61E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene29850 | 0.821478 | 3.95E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene29850 | 0.815541 | 8.77E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene29850 | 0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene29850 | 0.869085 | 4.03E-66 | -1.69E-46 |
| MS.gene055228 | MS.gene29850 | 0.815778 | 7.77E-52 | -1.69E-46 |
| MS.gene05531 | MS.gene29850 | 0.805436 | 1.34E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene29850 | 0.821807 | 3.32E-53 | -1.69E-46 |
| MS.gene056252 | MS.gene29850 | 0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene29850 | 0.816691 | 4.85E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene29850 | 0.822828 | 1.92E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene29850 | 0.802283 | 6.04E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene29850 | 0.817298 | 3.55E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene29850 | 0.81269 | 3.73E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene29850 | 0.808176 | 3.52E-50 | -1.69E-46 |
| MS.gene058294 | MS.gene29850 | 0.827686 | 1.36E-54 | -1.69E-46 |
| MS.gene058625 | MS.gene29850 | 0.813007 | 3.18E-51 | -1.69E-46 |
| MS.gene059272 | MS.gene29850 | 0.817573 | 3.07E-52 | -1.69E-46 |
| MS.gene059276 | MS.gene29850 | 0.820198 | 7.78E-53 | -1.69E-46 |
| MS.gene059584 | MS.gene29850 | 0.828643 | 8.02E-55 | -1.69E-46 |
| MS.gene060011 | MS.gene29850 | 0.80854 | 2.95E-50 | -1.69E-46 |
| MS.gene060373 | MS.gene29850 | 0.803737 | 3.02E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29850.t1 | MTR_3g073860 | 84.333 | 900 | 87 | 4 | 1 | 857 | 1353 | 2241 | 0.0 | 1516 |
| MS.gene29850.t1 | MTR_3g073820 | 80.791 | 177 | 25 | 1 | 1 | 177 | 1316 | 1483 | 1.25e-82 | 290 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29850.t1 | AT1G36160 | 65.962 | 899 | 251 | 5 | 1 | 856 | 1352 | 2238 | 0.0 | 1222 |
| MS.gene29850.t1 | AT1G36160 | 65.962 | 899 | 251 | 5 | 1 | 856 | 1352 | 2238 | 0.0 | 1222 |
| MS.gene29850.t1 | AT1G36180 | 65.440 | 897 | 255 | 5 | 1 | 854 | 1453 | 2337 | 0.0 | 1212 |
Find 217 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATCTGGTTCTTACATTT+TGG | 0.120980 | 3.4:-72502127 | MS.gene29850:CDS |
| GATCCTCGTGCTGCCATTTC+TGG | 0.187474 | 3.4:-72500508 | MS.gene29850:CDS |
| TTGCTTCAGTTGACAAATAT+TGG | 0.234765 | 3.4:-72499422 | MS.gene29850:CDS |
| GTGCACTCTGAGGTGGGGCT+TGG | 0.240162 | 3.4:-72500054 | MS.gene29850:intron |
| ACCTTCAAGGCCGGTTCTTT+TGG | 0.243130 | 3.4:-72501247 | MS.gene29850:CDS |
| TCTGGAACTCTAGATGTTAA+AGG | 0.248026 | 3.4:-72500490 | MS.gene29850:CDS |
| GTTGCTGCTAAGTAAATTAA+AGG | 0.269817 | 3.4:+72501166 | None:intergenic |
| TCAACAATTGATTACTCTTA+AGG | 0.291975 | 3.4:-72499888 | MS.gene29850:CDS |
| ACCATTCTTGGCAAAGGATA+TGG | 0.295191 | 3.4:-72500953 | MS.gene29850:CDS |
| TGCACTCTGAGGTGGGGCTT+GGG | 0.299129 | 3.4:-72500053 | MS.gene29850:intron |
| CAAGACTGCCCAAGCGATAT+TGG | 0.299270 | 3.4:-72500239 | MS.gene29850:CDS |
| GTCCTTCCAGACGGGAATTC+AGG | 0.305442 | 3.4:+72501295 | None:intergenic |
| ATTTAGAACAAGAGAATTGT+TGG | 0.349451 | 3.4:-72499930 | MS.gene29850:CDS |
| ATTTACTTAGCAGCAACTTC+TGG | 0.349966 | 3.4:-72501160 | MS.gene29850:CDS |
| AGTGGTAGTGGGGCCATTGC+CGG | 0.356809 | 3.4:-72500911 | MS.gene29850:CDS |
| AACAACAGTTGAGGCAATCT+TGG | 0.362349 | 3.4:-72502061 | MS.gene29850:CDS |
| GCAAACTGGAGAGGCTTTGC+GGG | 0.363331 | 3.4:-72500181 | MS.gene29850:CDS |
| TCGGCATTAAACAAAGTTCT+TGG | 0.363639 | 3.4:-72500749 | MS.gene29850:CDS |
| ACCAGAGTCTTTGTTACTCT+TGG | 0.365428 | 3.4:+72499850 | None:intergenic |
| GTGCTTATCTTGCAAGGCTT+GGG | 0.366853 | 3.4:-72500820 | MS.gene29850:CDS |
| CCTCCTCGGCCACACTTAAA+CGG | 0.367122 | 3.4:+72501134 | None:intergenic |
| CCCGAGGATTATGCCCGAAT+TGG | 0.367223 | 3.4:-72501037 | MS.gene29850:CDS |
| TTCCTCAAGCCGGCCAAGTC+TGG | 0.374336 | 3.4:-72500279 | MS.gene29850:CDS |
| CGCAAACTGGAGAGGCTTTG+CGG | 0.378710 | 3.4:-72500182 | MS.gene29850:CDS |
| TGGGTTATAGATACCATTCT+TGG | 0.380053 | 3.4:-72500965 | MS.gene29850:CDS |
| GATCAGCCTATGATTCTTAC+CGG | 0.386443 | 3.4:-72500776 | MS.gene29850:CDS |
| ACCCTTTGCAGCCATTCTTA+AGG | 0.387806 | 3.4:+72499727 | None:intergenic |
| CCAAGCATCTTCACTACCTT+TGG | 0.391187 | 3.4:+72499529 | None:intergenic |
| GTAGCTAAGCCACTTCAAAA+TGG | 0.392176 | 3.4:+72500622 | None:intergenic |
| CCATTGCCGGTGCCTATTCA+AGG | 0.393558 | 3.4:-72500898 | MS.gene29850:CDS |
| GCAGTCTTGGTTGAAGAATC+AGG | 0.394309 | 3.4:+72500253 | None:intergenic |
| GAATGAAAACTATCAACCTT+TGG | 0.397666 | 3.4:-72501669 | MS.gene29850:CDS |
| AGTTGTTCATCTTACAGTTT+CGG | 0.400691 | 3.4:-72500666 | MS.gene29850:CDS |
| TCAACTGAAGCAACAGTCTC+TGG | 0.401233 | 3.4:+72499432 | None:intergenic |
| TAAAGGTAATGCCGTTGAAC+CGG | 0.407690 | 3.4:-72499972 | MS.gene29850:CDS |
| AATGAAAACTATCAACCTTT+GGG | 0.410806 | 3.4:-72501668 | MS.gene29850:CDS |
| CCATCACGGATGATCCAATT+CGG | 0.411685 | 3.4:+72501023 | None:intergenic |
| CCTAAAATCATGGCAACAAA+TGG | 0.413224 | 3.4:-72500689 | MS.gene29850:CDS |
| GCCAAAAGAACCGGCCTTGA+AGG | 0.413854 | 3.4:+72501246 | None:intergenic |
| TTGATCTCAATCATTCCTTC+CGG | 0.418592 | 3.4:+72499953 | None:intergenic |
| TTCATTGTATGCCCTTGAAT+AGG | 0.418782 | 3.4:+72500886 | None:intergenic |
| ATTGAGTCCAGGAGGACGTT+TGG | 0.423583 | 3.4:+72501357 | None:intergenic |
| GGTGCTTATCTTGCAAGGCT+TGG | 0.427196 | 3.4:-72500821 | MS.gene29850:CDS |
| CTCCTCGGCCACACTTAAAC+GGG | 0.428590 | 3.4:+72501135 | None:intergenic |
| TGGGCAAGGACAGTTGTTAC+AGG | 0.429470 | 3.4:-72500412 | MS.gene29850:CDS |
| GAGGGAAGTGGAGTATTTAC+CGG | 0.433082 | 3.4:-72500542 | MS.gene29850:CDS |
| GAGGCTTTGCGGGTGGGCAA+AGG | 0.433561 | 3.4:-72500171 | MS.gene29850:CDS |
| TGAGGCAATCTTGGAAGATC+TGG | 0.434123 | 3.4:-72502052 | MS.gene29850:CDS |
| CCCGTCTGGAAGGACAATAT+TGG | 0.436965 | 3.4:-72501287 | MS.gene29850:CDS |
| AGGCTTTGCGGGTGGGCAAA+GGG | 0.438540 | 3.4:-72500170 | MS.gene29850:CDS |
| TCCATATCCTTTGCCAAGAA+TGG | 0.441744 | 3.4:+72500952 | None:intergenic |
| TTCAAATGACGTGACCTTCA+AGG | 0.442848 | 3.4:-72501260 | MS.gene29850:CDS |
| TACAGTTCAGTCACTGTAAA+GGG | 0.445478 | 3.4:-72501713 | MS.gene29850:CDS |
| CAATATCGCTTGGGCAGTCT+TGG | 0.446016 | 3.4:+72500240 | None:intergenic |
| CGGCATTACCTTTAGCCGTT+CGG | 0.446414 | 3.4:+72499981 | None:intergenic |
| ACAGTTTCGGACGACCTTGA+AGG | 0.447055 | 3.4:-72500653 | MS.gene29850:CDS |
| GGTGTAAGAATGCACATATT+AGG | 0.450115 | 3.4:-72502006 | MS.gene29850:CDS |
| GTTCCTGCCAAACGTCCTCC+TGG | 0.451169 | 3.4:-72501364 | MS.gene29850:CDS |
| TATTGAAATCCAATATCGCT+TGG | 0.452614 | 3.4:+72500230 | None:intergenic |
| TTGTGTGGGACGTCAAGCTT+TGG | 0.454799 | 3.4:-72501978 | MS.gene29850:CDS |
| TTCTCCTGGGCCAAAAGAAC+CGG | 0.462699 | 3.4:+72501237 | None:intergenic |
| AACATCTAGAGTTCCAGAAA+TGG | 0.465185 | 3.4:+72500495 | None:intergenic |
| ATGATGTTGGCATGGTATCC+TGG | 0.465736 | 3.4:-72501336 | MS.gene29850:CDS |
| AAATGGAAGAAACGCCTTCA+AGG | 0.468812 | 3.4:+72500639 | None:intergenic |
| TTCGAAGGAATTCTTCAGGC+TGG | 0.470358 | 3.4:-72500142 | MS.gene29850:intron |
| CGAGGATCGCATGAATTTCC+CGG | 0.471630 | 3.4:+72500523 | None:intergenic |
| TTTGAACTCTTGAGTGGTAG+TGG | 0.472325 | 3.4:-72500923 | MS.gene29850:CDS |
| AGCTTTGTGGAGACACTAGA+AGG | 0.473664 | 3.4:-72500436 | MS.gene29850:CDS |
| CGGAGATTGCACAGGAGAAT+CGG | 0.473835 | 3.4:-72499656 | MS.gene29850:CDS |
| CATCACGGATGATCCAATTC+GGG | 0.480609 | 3.4:+72501024 | None:intergenic |
| TTTGCTTGCGGATGATATAG+AGG | 0.480941 | 3.4:+72502235 | None:intergenic |
| TCCGGTACAACTGTTGGAAT+TGG | 0.481182 | 3.4:-72500842 | MS.gene29850:CDS |
| CATTAAACAAAGTTCTTGGT+AGG | 0.481641 | 3.4:-72500745 | MS.gene29850:CDS |
| TGGCAGAAACATATGACAAT+TGG | 0.482231 | 3.4:+72499591 | None:intergenic |
| CCATTCTTTGAGCAAGTTCG+TGG | 0.484265 | 3.4:+72499571 | None:intergenic |
| TTGAACTCTTGAGTGGTAGT+GGG | 0.484304 | 3.4:-72500922 | MS.gene29850:CDS |
| TCCAATTCGGGCATAATCCT+CGG | 0.487392 | 3.4:+72501036 | None:intergenic |
| ACATACTGAAAACCATGCTC+AGG | 0.487712 | 3.4:+72501070 | None:intergenic |
| CTAAAGTACACATCTTCTCC+TGG | 0.491521 | 3.4:+72501223 | None:intergenic |
| AGTCCAGGAGGACGTTTGGC+AGG | 0.492839 | 3.4:+72501361 | None:intergenic |
| TTCCTTAAGAATGGCTGCAA+AGG | 0.492840 | 3.4:-72499729 | MS.gene29850:CDS |
| TCCTTAAGAATGGCTGCAAA+GGG | 0.494029 | 3.4:-72499728 | MS.gene29850:CDS |
| GTAGTAAAGAAGATTTCATC+TGG | 0.494188 | 3.4:-72502141 | MS.gene29850:CDS |
| CCAATTCGGGCATAATCCTC+GGG | 0.495778 | 3.4:+72501037 | None:intergenic |
| GCATGATACTTCCTTAAGAA+TGG | 0.495850 | 3.4:-72499738 | MS.gene29850:CDS |
| CTACAGTTCAGTCACTGTAA+AGG | 0.497271 | 3.4:-72501714 | MS.gene29850:CDS |
| TGGCATGGTATCCTGGTTGA+TGG | 0.501443 | 3.4:-72501329 | MS.gene29850:CDS |
| CTCTAGATGTTAAAGGAAAG+TGG | 0.508134 | 3.4:-72500483 | MS.gene29850:CDS |
| TATGCTGACCGAACGGCTAA+AGG | 0.508351 | 3.4:-72499989 | MS.gene29850:CDS |
| AATGGGAGTAATGGAGGAGT+TGG | 0.508460 | 3.4:-72502307 | None:intergenic |
| CCACGAACTTGCTCAAAGAA+TGG | 0.512922 | 3.4:-72499571 | MS.gene29850:CDS |
| AGGAAAATTAACATCGAAGC+TGG | 0.513533 | 3.4:-72502093 | MS.gene29850:CDS |
| ATTGAAATCCAATATCGCTT+GGG | 0.516079 | 3.4:+72500231 | None:intergenic |
| CCTGAAGAATTCCTTCGAAA+AGG | 0.516616 | 3.4:+72500146 | None:intergenic |
| ACAGCATGTGGACAAGCAAA+TGG | 0.518240 | 3.4:-72501952 | MS.gene29850:CDS |
| TGCCCGTTTAAGTGTGGCCG+AGG | 0.520482 | 3.4:-72501137 | MS.gene29850:CDS |
| AACTGGAGAGGCTTTGCGGG+TGG | 0.523030 | 3.4:-72500178 | MS.gene29850:CDS |
| TACAGCTCTCAGATGCAACT+TGG | 0.524322 | 3.4:-72500716 | MS.gene29850:CDS |
| GTGGACAAGCAAATGGTGCT+TGG | 0.525095 | 3.4:-72501945 | MS.gene29850:CDS |
| CCTTGAATAGGCACCGGCAA+TGG | 0.525205 | 3.4:+72500898 | None:intergenic |
| ACGATGAAGCCTTCTTCAGA+TGG | 0.525628 | 3.4:-72499502 | MS.gene29850:CDS |
| GAATTGGTGCTTATCTTGCA+AGG | 0.529052 | 3.4:-72500826 | MS.gene29850:CDS |
| AATCATTCCTTCCGGTTCAA+CGG | 0.529117 | 3.4:+72499961 | None:intergenic |
| CGGGAAATCCATTCCTCTGT+CGG | 0.530916 | 3.4:-72502027 | MS.gene29850:CDS |
| TATGCGTCCGGTACAACTGT+TGG | 0.537088 | 3.4:-72500848 | MS.gene29850:CDS |
| TTGAAAGTGGAGAAACAAGA+TGG | 0.537377 | 3.4:-72500985 | MS.gene29850:CDS |
| ACCAATTCCAACAGTTGTAC+CGG | 0.538265 | 3.4:+72500841 | None:intergenic |
| CCAATATTGTCCTTCCAGAC+GGG | 0.539886 | 3.4:+72501287 | None:intergenic |
| TGTACGCCTGAATTCCCGTC+TGG | 0.541303 | 3.4:-72501301 | MS.gene29850:CDS |
| ATTAAACAAAGTTCTTGGTA+GGG | 0.541421 | 3.4:-72500744 | MS.gene29850:CDS |
| CTTGGCAAAGGATATGGAGT+AGG | 0.541579 | 3.4:-72500947 | MS.gene29850:CDS |
| CTTTAATTCATGTGCCATCA+CGG | 0.541630 | 3.4:+72501009 | None:intergenic |
| ATCATCCCTCCATCTGAAGA+AGG | 0.543921 | 3.4:+72499493 | None:intergenic |
| TTGTGGAGACACTAGAAGGA+TGG | 0.544026 | 3.4:-72500432 | MS.gene29850:CDS |
| ACCAATATTGTCCTTCCAGA+CGG | 0.545136 | 3.4:+72501286 | None:intergenic |
| TCAAGCTGACATGGATCAGT+AGG | 0.546560 | 3.4:+72500319 | None:intergenic |
| CATGAATTAAAGCTTGAAAG+TGG | 0.549222 | 3.4:-72500998 | MS.gene29850:CDS |
| ACTGGAGAGGCTTTGCGGGT+GGG | 0.552538 | 3.4:-72500177 | MS.gene29850:CDS |
| GTTACAGGAAGGGCAAAGCT+TGG | 0.552835 | 3.4:-72500397 | MS.gene29850:CDS |
| AAGCTTGTTTCAGAGTCGGT+TGG | 0.554164 | 3.4:-72501108 | MS.gene29850:CDS |
| AATTCAAATAGCCAAAGATA+AGG | 0.554373 | 3.4:-72501449 | MS.gene29850:CDS |
| CGCCTGAATTCCCGTCTGGA+AGG | 0.554705 | 3.4:-72501297 | MS.gene29850:CDS |
| TTCATTCTCGCAAACTGGAG+AGG | 0.555637 | 3.4:-72500190 | MS.gene29850:CDS |
| TTATCGATTGGCGTAACTCA+CGG | 0.557359 | 3.4:-72499691 | MS.gene29850:CDS |
| ACTTGGTGGACCTAAAATCA+TGG | 0.557762 | 3.4:-72500699 | MS.gene29850:CDS |
| ATAGATACCATTCTTGGCAA+AGG | 0.557831 | 3.4:-72500959 | MS.gene29850:CDS |
| GTCATTGTAAACAATGTGAC+TGG | 0.558517 | 3.4:-72501919 | MS.gene29850:CDS |
| GTTAAAGCTTGTTTCAGAGT+CGG | 0.559060 | 3.4:-72501112 | MS.gene29850:CDS |
| CATTGCCGGTGCCTATTCAA+GGG | 0.560077 | 3.4:-72500897 | MS.gene29850:CDS |
| TCGTGAGAATCAAGCTGACA+TGG | 0.560925 | 3.4:+72500310 | None:intergenic |
| CCTCCTGGACTCAATGATGT+TGG | 0.561779 | 3.4:-72501349 | MS.gene29850:CDS |
| GTTAAAGGAAAGTGGCTGAA+AGG | 0.561897 | 3.4:-72500475 | MS.gene29850:CDS |
| ATCAGGAAACCAGACTTGGC+CGG | 0.561985 | 3.4:+72500270 | None:intergenic |
| TTCTTACACCGACAGAGGAA+TGG | 0.562208 | 3.4:+72502019 | None:intergenic |
| TTTCAGAGTCGGTTGGTCTG+AGG | 0.562881 | 3.4:-72501101 | MS.gene29850:CDS |
| ACTGTAAAGGGTCCGCTGCA+TGG | 0.564305 | 3.4:-72501701 | MS.gene29850:CDS |
| AAGAATCAGGAAACCAGACT+TGG | 0.565570 | 3.4:+72500266 | None:intergenic |
| CAAGGACAGTTGTTACAGGA+AGG | 0.566960 | 3.4:-72500408 | MS.gene29850:CDS |
| GGACGTTTGGCAGGAACAAG+AGG | 0.567974 | 3.4:+72501370 | None:intergenic |
| GAGGAATTTAACCCTGAGCA+TGG | 0.569587 | 3.4:-72501082 | MS.gene29850:CDS |
| ACAGGAAGGGCAAAGCTTGG+TGG | 0.569971 | 3.4:-72500394 | MS.gene29850:CDS |
| AACCAGACTTGGCCGGCTTG+AGG | 0.570870 | 3.4:+72500277 | None:intergenic |
| TTCTGGTGCCCGTTTAAGTG+TGG | 0.572790 | 3.4:-72501143 | MS.gene29850:CDS |
| GGACGCATATGTCAGTGTAA+AGG | 0.573182 | 3.4:+72500862 | None:intergenic |
| ACATGGTCAATTCAACAGAC+AGG | 0.574706 | 3.4:-72501472 | MS.gene29850:CDS |
| CCGTTTAAGTGTGGCCGAGG+AGG | 0.578205 | 3.4:-72501134 | MS.gene29850:CDS |
| ACAAGCAAATGGTGCTTGGA+GGG | 0.578902 | 3.4:-72501941 | MS.gene29850:CDS |
| AAATTACGAGGATAAACTAA+AGG | 0.581886 | 3.4:-72499465 | MS.gene29850:CDS |
| ATGCCAACATCATTGAGTCC+AGG | 0.582110 | 3.4:+72501346 | None:intergenic |
| TGTGGAGACACTAGAAGGAT+GGG | 0.582167 | 3.4:-72500431 | MS.gene29850:CDS |
| ATGAAGCCTTCTTCAGATGG+AGG | 0.584368 | 3.4:-72499499 | MS.gene29850:CDS |
| TTTACACTGACATATGCGTC+CGG | 0.584427 | 3.4:-72500860 | MS.gene29850:CDS |
| GCCAAGAGTAACAAAGACTC+TGG | 0.584834 | 3.4:-72499851 | MS.gene29850:CDS |
| CAATCTTGGAAGATCTGGCA+CGG | 0.584902 | 3.4:-72502047 | MS.gene29850:CDS |
| TTTAGGTCAATAACTCCCAA+AGG | 0.585916 | 3.4:+72501653 | None:intergenic |
| GAGAGGGTTGTTCCTCAAGC+CGG | 0.586703 | 3.4:-72500289 | MS.gene29850:CDS |
| TAATCAAAGAAGTTATCGAT+TGG | 0.589693 | 3.4:-72499703 | MS.gene29850:CDS |
| AGCTCTCAGATGCAACTTGG+TGG | 0.589883 | 3.4:-72500713 | MS.gene29850:CDS |
| GATTTACAAGCTCTACCTCA+AGG | 0.593382 | 3.4:-72499386 | MS.gene29850:CDS |
| TCTACCGCAACAATTCCCAC+AGG | 0.593690 | 3.4:+72500367 | None:intergenic |
| AGGTAGTGAAGATGCTTGGT+TGG | 0.593835 | 3.4:-72499525 | MS.gene29850:CDS |
| GCTGACAGTCGAATCAACTC+TGG | 0.595574 | 3.4:-72500025 | MS.gene29850:CDS |
| AATGACGTGACCTTCAAGGC+CGG | 0.597622 | 3.4:-72501256 | MS.gene29850:CDS |
| CTGAATTCTGATATTGCCAA+AGG | 0.597711 | 3.4:-72499545 | MS.gene29850:CDS |
| AGGGAAGTGGAGTATTTACC+GGG | 0.599432 | 3.4:-72500541 | MS.gene29850:CDS |
| GTATGCCCTTGAATAGGCAC+CGG | 0.600171 | 3.4:+72500892 | None:intergenic |
| TTCAGAGAAAGAAGGTATCG+AGG | 0.600284 | 3.4:-72501398 | MS.gene29850:CDS |
| TGGACTCAATGATGTTGGCA+TGG | 0.602326 | 3.4:-72501344 | MS.gene29850:CDS |
| CAGTTTGCGAGAATGAAAAG+TGG | 0.602541 | 3.4:+72500196 | None:intergenic |
| GTTGACAAATATTGGCGACT+CGG | 0.603072 | 3.4:-72499414 | MS.gene29850:CDS |
| GACGTTTGGCAGGAACAAGA+GGG | 0.603685 | 3.4:+72501371 | None:intergenic |
| GACAAGCAAATGGTGCTTGG+AGG | 0.604617 | 3.4:-72501942 | MS.gene29850:CDS |
| CCAAAGGTAGTGAAGATGCT+TGG | 0.605449 | 3.4:-72499529 | MS.gene29850:CDS |
| TAAAGTACACATCTTCTCCT+GGG | 0.605925 | 3.4:+72501224 | None:intergenic |
| AATTCAGATATATCGAGAGA+TGG | 0.608587 | 3.4:-72501762 | MS.gene29850:intron |
| GAAACAAGCTTTAACCTCCT+CGG | 0.609487 | 3.4:+72501120 | None:intergenic |
| TCAGAGAAAGAAGGTATCGA+GGG | 0.609629 | 3.4:-72501397 | MS.gene29850:CDS |
| TGAAAGTGGAGAAACAAGAT+GGG | 0.609967 | 3.4:-72500984 | MS.gene29850:CDS |
| TGAAGCCTTCTTCAGATGGA+GGG | 0.610858 | 3.4:-72499498 | MS.gene29850:CDS |
| TGAACTCTTGAGTGGTAGTG+GGG | 0.613680 | 3.4:-72500921 | MS.gene29850:CDS |
| AATCTTGGAAGATCTGGCAC+GGG | 0.614557 | 3.4:-72502046 | MS.gene29850:CDS |
| TCAGCTTGATTCTCACGAGA+GGG | 0.617471 | 3.4:-72500305 | MS.gene29850:CDS |
| GTCAGCTTGATTCTCACGAG+AGG | 0.617929 | 3.4:-72500306 | MS.gene29850:CDS |
| AGTGCACCACCTACATGAGA+AGG | 0.618027 | 3.4:+72500596 | None:intergenic |
| CGTACACATTTCCATCAACC+AGG | 0.619128 | 3.4:+72501318 | None:intergenic |
| AAGCTTTGGATTACAGCATG+TGG | 0.619397 | 3.4:-72501964 | MS.gene29850:CDS |
| CCGAATTGGATCATCCGTGA+TGG | 0.621221 | 3.4:-72501023 | MS.gene29850:CDS |
| TTGGGATGAGATGCATTCAG+AGG | 0.622395 | 3.4:-72500802 | MS.gene29850:CDS |
| GGTAATGCCGTTGAACCGGA+AGG | 0.624713 | 3.4:-72499968 | MS.gene29850:CDS |
| AAGCTTGGTGGAATCCCTGT+GGG | 0.625761 | 3.4:-72500382 | MS.gene29850:CDS |
| CATACTGAAAACCATGCTCA+GGG | 0.630427 | 3.4:+72501071 | None:intergenic |
| GTAGGATTTGAACTCTTGAG+TGG | 0.630478 | 3.4:-72500929 | MS.gene29850:CDS |
| TCAGATATATCGAGAGATGG+AGG | 0.635169 | 3.4:-72501759 | MS.gene29850:intron |
| AAAAGGGCGGCAAGACCTTG+AGG | 0.635397 | 3.4:+72499371 | None:intergenic |
| AAGGACAGTTGTTACAGGAA+GGG | 0.635796 | 3.4:-72500407 | MS.gene29850:CDS |
| CTACCGCAACAATTCCCACA+GGG | 0.636640 | 3.4:+72500368 | None:intergenic |
| AGTTTGCGAGAATGAAAAGT+GGG | 0.642694 | 3.4:+72500197 | None:intergenic |
| AAACATCCTTAGAAAAGACA+TGG | 0.642868 | 3.4:-72501489 | MS.gene29850:CDS |
| TGAATTGTATGCTGACCGAA+CGG | 0.643251 | 3.4:-72499996 | MS.gene29850:CDS |
| ATAGCTATCTGAGTATACAA+AGG | 0.645302 | 3.4:+72499776 | None:intergenic |
| AACATTGTGAGAGATGCGGC+TGG | 0.647787 | 3.4:-72499617 | MS.gene29850:CDS |
| AATCCCTGTGGGAATTGTTG+CGG | 0.660357 | 3.4:-72500371 | MS.gene29850:CDS |
| GTAGACCACGTTATGAGTGG+TGG | 0.663734 | 3.4:+72501733 | None:intergenic |
| GTTCCAGAAATGGCAGCACG+AGG | 0.666255 | 3.4:+72500505 | None:intergenic |
| TTCACTGGTACACCATGCAG+CGG | 0.668255 | 3.4:+72501689 | None:intergenic |
| GTATGTATATTTAACACCCG+AGG | 0.669686 | 3.4:-72501053 | MS.gene29850:CDS |
| AAAGCTTGGTGGAATCCCTG+TGG | 0.681491 | 3.4:-72500383 | MS.gene29850:CDS |
| TCAAGAAGAAACAACAGTTG+AGG | 0.683344 | 3.4:-72502070 | MS.gene29850:CDS |
| GTGCATTCTTACACCGACAG+AGG | 0.690584 | 3.4:+72502014 | None:intergenic |
| AGACACTAGAAGGATGGGCA+AGG | 0.694410 | 3.4:-72500426 | MS.gene29850:CDS |
| GGATGCCACCACTCATAACG+TGG | 0.705517 | 3.4:-72501738 | MS.gene29850:CDS |
| GGATGATTCAGCAAATTACG+AGG | 0.707668 | 3.4:-72499477 | MS.gene29850:CDS |
| ACGTTTGGCAGGAACAAGAG+GGG | 0.722740 | 3.4:+72501372 | None:intergenic |
| GATCAACATTGTGAGAGATG+CGG | 0.727414 | 3.4:-72499621 | MS.gene29850:CDS |
| CCAACATCATTGAGTCCAGG+AGG | 0.729473 | 3.4:+72501349 | None:intergenic |
| ACTGTAGACCACGTTATGAG+TGG | 0.733966 | 3.4:+72501730 | None:intergenic |
| GGTCAGCATACAATTCAATG+CGG | 0.782017 | 3.4:+72500002 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAACTCCATTAATATAGA+AGG | + | chr3.4:72499720-72499739 | None:intergenic | 20.0% |
| !! | TCAATAAATATCACTTACAA+GGG | + | chr3.4:72499956-72499975 | None:intergenic | 20.0% |
| !! | TTCAATAAATATCACTTACA+AGG | + | chr3.4:72499957-72499976 | None:intergenic | 20.0% |
| !!! | ATTTATTGAATTTAGTTCAG+TGG | - | chr3.4:72499967-72499986 | MS.gene29850:CDS | 20.0% |
| ! | AAATTACGAGGATAAACTAA+AGG | - | chr3.4:72502071-72502090 | MS.gene29850:CDS | 25.0% |
| ! | AATGAAAACTATCAACCTTT+GGG | - | chr3.4:72499868-72499887 | MS.gene29850:CDS | 25.0% |
| ! | AATTCAAATAGCCAAAGATA+AGG | - | chr3.4:72500087-72500106 | MS.gene29850:intron | 25.0% |
| ! | ACTTTCACCTTCTATATTAA+TGG | - | chr3.4:72499710-72499729 | MS.gene29850:CDS | 25.0% |
| ! | AGTCATAATTACTTGGAATT+AGG | + | chr3.4:72499344-72499363 | None:intergenic | 25.0% |
| ! | ATGATAAGTCAAGTCAAAAT+AGG | - | chr3.4:72499990-72500009 | MS.gene29850:CDS | 25.0% |
| ! | ATTAAACAAAGTTCTTGGTA+GGG | - | chr3.4:72500792-72500811 | MS.gene29850:CDS | 25.0% |
| ! | ATTGGGATGTATACAAAAAT+GGG | + | chr3.4:72501457-72501476 | None:intergenic | 25.0% |
| ! | CAATAAATATCACTTACAAG+GGG | + | chr3.4:72499955-72499974 | None:intergenic | 25.0% |
| ! | TAATCAAAGAAGTTATCGAT+TGG | - | chr3.4:72501833-72501852 | MS.gene29850:intron | 25.0% |
| ! | TACTCTTAAGGAAAAACTTT+CGG | - | chr3.4:72501660-72501679 | MS.gene29850:CDS | 25.0% |
| ! | TCAACAATTGATTACTCTTA+AGG | - | chr3.4:72501648-72501667 | MS.gene29850:CDS | 25.0% |
| ! | TTATATTCTTAAAAGTCTCG+AGG | - | chr3.4:72499667-72499686 | MS.gene29850:CDS | 25.0% |
| !! | ATTTAGAACAAGAGAATTGT+TGG | - | chr3.4:72501606-72501625 | MS.gene29850:CDS | 25.0% |
| !!! | GTTTTTTACCTTGCTTAAAA+GGG | + | chr3.4:72502184-72502203 | None:intergenic | 25.0% |
| !!! | TGTTTTTTACCTTGCTTAAA+AGG | + | chr3.4:72502185-72502204 | None:intergenic | 25.0% |
| AAACATCCTTAGAAAAGACA+TGG | - | chr3.4:72500047-72500066 | MS.gene29850:intron | 30.0% | |
| AATATAGAAGGTGAAAGTTG+TGG | + | chr3.4:72499708-72499727 | None:intergenic | 30.0% | |
| AATTCAGATATATCGAGAGA+TGG | - | chr3.4:72499774-72499793 | MS.gene29850:CDS | 30.0% | |
| AGTTGTTCATCTTACAGTTT+CGG | - | chr3.4:72500870-72500889 | MS.gene29850:CDS | 30.0% | |
| ATAGCTATCTGAGTATACAA+AGG | + | chr3.4:72501763-72501782 | None:intergenic | 30.0% | |
| ATTGAAATCCAATATCGCTT+GGG | + | chr3.4:72501308-72501327 | None:intergenic | 30.0% | |
| ATTTCGCAGTCATAATTACT+TGG | + | chr3.4:72499351-72499370 | None:intergenic | 30.0% | |
| CATGAATTAAAGCTTGAAAG+TGG | - | chr3.4:72500538-72500557 | MS.gene29850:CDS | 30.0% | |
| CATTAAACAAAGTTCTTGGT+AGG | - | chr3.4:72500791-72500810 | MS.gene29850:CDS | 30.0% | |
| CATTGGGATGTATACAAAAA+TGG | + | chr3.4:72501458-72501477 | None:intergenic | 30.0% | |
| GAATGAAAACTATCAACCTT+TGG | - | chr3.4:72499867-72499886 | MS.gene29850:CDS | 30.0% | |
| GTAGTAAAGAAGATTTCATC+TGG | - | chr3.4:72499395-72499414 | MS.gene29850:CDS | 30.0% | |
| GTTGCTGCTAAGTAAATTAA+AGG | + | chr3.4:72500373-72500392 | None:intergenic | 30.0% | |
| TATTGAAATCCAATATCGCT+TGG | + | chr3.4:72501309-72501328 | None:intergenic | 30.0% | |
| TTGCTTCAGTTGACAAATAT+TGG | - | chr3.4:72502114-72502133 | MS.gene29850:CDS | 30.0% | |
| TTTGTATACATCCCAATGAT+GGG | - | chr3.4:72501460-72501479 | MS.gene29850:CDS | 30.0% | |
| TTTGTTTAATGCCGAAAAAC+CGG | + | chr3.4:72500782-72500801 | None:intergenic | 30.0% | |
| ! | AATTGACCATGTCTTTTCTA+AGG | + | chr3.4:72500056-72500075 | None:intergenic | 30.0% |
| ! | CTCAAATTTTCAGAGAAAGA+AGG | - | chr3.4:72500130-72500149 | MS.gene29850:intron | 30.0% |
| ! | TTTGAATTTTTGTGTGCAGA+AGG | - | chr3.4:72502289-72502308 | MS.gene29850:CDS | 30.0% |
| ! | TTTTGTATACATCCCAATGA+TGG | - | chr3.4:72501459-72501478 | MS.gene29850:CDS | 30.0% |
| !! | ACATATTAGGTGTTTTTGTG+TGG | - | chr3.4:72499543-72499562 | MS.gene29850:CDS | 30.0% |
| !! | CATATTAGGTGTTTTTGTGT+GGG | - | chr3.4:72499544-72499563 | MS.gene29850:CDS | 30.0% |
| !! | TTATGAGAAATGCTTTTTGC+AGG | - | chr3.4:72500018-72500037 | MS.gene29850:CDS | 30.0% |
| !!! | ATTTGAGCTCTGTTACTTTT+AGG | + | chr3.4:72500117-72500136 | None:intergenic | 30.0% |
| !!! | TATGATTCTTACCGGTTTTT+CGG | - | chr3.4:72500768-72500787 | MS.gene29850:CDS | 30.0% |
| !!! | TTCATCTGGTTCTTACATTT+TGG | - | chr3.4:72499409-72499428 | MS.gene29850:CDS | 30.0% |
| AGGAAAATTAACATCGAAGC+TGG | - | chr3.4:72499443-72499462 | MS.gene29850:CDS | 35.0% | |
| AGTTTGCGAGAATGAAAAGT+GGG | + | chr3.4:72501342-72501361 | None:intergenic | 35.0% | |
| ATAGATACCATTCTTGGCAA+AGG | - | chr3.4:72500577-72500596 | MS.gene29850:intron | 35.0% | |
| ATTTACTTAGCAGCAACTTC+TGG | - | chr3.4:72500376-72500395 | MS.gene29850:CDS | 35.0% | |
| CCTAAAATCATGGCAACAAA+TGG | - | chr3.4:72500847-72500866 | MS.gene29850:CDS | 35.0% | |
| CTCTAGATGTTAAAGGAAAG+TGG | - | chr3.4:72501053-72501072 | MS.gene29850:CDS | 35.0% | |
| CTGAATTCTGATATTGCCAA+AGG | - | chr3.4:72501991-72502010 | MS.gene29850:CDS | 35.0% | |
| CTTCATCATGTGTTGAAACA+TGG | - | chr3.4:72502255-72502274 | MS.gene29850:CDS | 35.0% | |
| CTTTAATTCATGTGCCATCA+CGG | + | chr3.4:72500530-72500549 | None:intergenic | 35.0% | |
| GAAAAACCGGTAAGAATCAT+AGG | + | chr3.4:72500769-72500788 | None:intergenic | 35.0% | |
| GCATGATACTTCCTTAAGAA+TGG | - | chr3.4:72501798-72501817 | MS.gene29850:intron | 35.0% | |
| GGTGTAAGAATGCACATATT+AGG | - | chr3.4:72499530-72499549 | MS.gene29850:CDS | 35.0% | |
| GTATGTATATTTAACACCCG+AGG | - | chr3.4:72500483-72500502 | MS.gene29850:CDS | 35.0% | |
| GTCATTGTAAACAATGTGAC+TGG | - | chr3.4:72499617-72499636 | MS.gene29850:CDS | 35.0% | |
| TAAAGTACACATCTTCTCCT+GGG | + | chr3.4:72500315-72500334 | None:intergenic | 35.0% | |
| TACAGTTCAGTCACTGTAAA+GGG | - | chr3.4:72499823-72499842 | MS.gene29850:CDS | 35.0% | |
| TCAAGAAGAAACAACAGTTG+AGG | - | chr3.4:72499466-72499485 | MS.gene29850:CDS | 35.0% | |
| TCGGCATTAAACAAAGTTCT+TGG | - | chr3.4:72500787-72500806 | MS.gene29850:CDS | 35.0% | |
| TGAAAGTGGAGAAACAAGAT+GGG | - | chr3.4:72500552-72500571 | MS.gene29850:intron | 35.0% | |
| TGGCAGAAACATATGACAAT+TGG | + | chr3.4:72501948-72501967 | None:intergenic | 35.0% | |
| TGGGTTATAGATACCATTCT+TGG | - | chr3.4:72500571-72500590 | MS.gene29850:intron | 35.0% | |
| TTCATTGTATGCCCTTGAAT+AGG | + | chr3.4:72500653-72500672 | None:intergenic | 35.0% | |
| TTGAAAGTGGAGAAACAAGA+TGG | - | chr3.4:72500551-72500570 | MS.gene29850:intron | 35.0% | |
| TTGATCTCAATCATTCCTTC+CGG | + | chr3.4:72501586-72501605 | None:intergenic | 35.0% | |
| TTTAGGTCAATAACTCCCAA+AGG | + | chr3.4:72499886-72499905 | None:intergenic | 35.0% | |
| ! | AACATCTAGAGTTCCAGAAA+TGG | + | chr3.4:72501044-72501063 | None:intergenic | 35.0% |
| ! | ACATTTTGGATGTTGATACC+AGG | - | chr3.4:72499423-72499442 | MS.gene29850:CDS | 35.0% |
| ! | ACTCACGGTCTTTCTTTTAT+CGG | - | chr3.4:72501860-72501879 | MS.gene29850:intron | 35.0% |
| ! | AGCTTCGATGTTAATTTTCC+TGG | + | chr3.4:72499444-72499463 | None:intergenic | 35.0% |
| ! | GTTAAAGCTTGTTTCAGAGT+CGG | - | chr3.4:72500424-72500443 | MS.gene29850:CDS | 35.0% |
| ! | TCTGGAACTCTAGATGTTAA+AGG | - | chr3.4:72501046-72501065 | MS.gene29850:CDS | 35.0% |
| ! | TTTTACCTTGCTTAAAAGGG+CGG | + | chr3.4:72502181-72502200 | None:intergenic | 35.0% |
| ! | TTTTGACAAAGACAGCTTTG+TGG | - | chr3.4:72501087-72501106 | MS.gene29850:CDS | 35.0% |
| !! | CCATTTGTTGCCATGATTTT+AGG | + | chr3.4:72500850-72500869 | None:intergenic | 35.0% |
| !! | TTTTAGGAGGTCCTTATCTT+TGG | + | chr3.4:72500101-72500120 | None:intergenic | 35.0% |
| !!! | GATCATCTACTTTTTGCTTG+CGG | + | chr3.4:72499316-72499335 | None:intergenic | 35.0% |
| !!! | GGTTGATAGTTTTCATTCAC+TGG | + | chr3.4:72499865-72499884 | None:intergenic | 35.0% |
| AAATGGAAGAAACGCCTTCA+AGG | + | chr3.4:72500900-72500919 | None:intergenic | 40.0% | |
| AACAACAGTTGAGGCAATCT+TGG | - | chr3.4:72499475-72499494 | MS.gene29850:CDS | 40.0% | |
| AAGAATCAGGAAACCAGACT+TGG | + | chr3.4:72501273-72501292 | None:intergenic | 40.0% | |
| AAGGACAGTTGTTACAGGAA+GGG | - | chr3.4:72501129-72501148 | MS.gene29850:CDS | 40.0% | |
| AATCATTCCTTCCGGTTCAA+CGG | + | chr3.4:72501578-72501597 | None:intergenic | 40.0% | |
| ACATACTGAAAACCATGCTC+AGG | + | chr3.4:72500469-72500488 | None:intergenic | 40.0% | |
| ACATGGTCAATTCAACAGAC+AGG | - | chr3.4:72500064-72500083 | MS.gene29850:intron | 40.0% | |
| ACCAATATTGTCCTTCCAGA+CGG | + | chr3.4:72500253-72500272 | None:intergenic | 40.0% | |
| ACCAATTCCAACAGTTGTAC+CGG | + | chr3.4:72500698-72500717 | None:intergenic | 40.0% | |
| ACCAGAGTCTTTGTTACTCT+TGG | + | chr3.4:72501689-72501708 | None:intergenic | 40.0% | |
| ACCATTCTTGGCAAAGGATA+TGG | - | chr3.4:72500583-72500602 | MS.gene29850:intron | 40.0% | |
| AGCTACATTCCTTCTCATGT+AGG | - | chr3.4:72500931-72500950 | MS.gene29850:CDS | 40.0% | |
| CAGTTTGCGAGAATGAAAAG+TGG | + | chr3.4:72501343-72501362 | None:intergenic | 40.0% | |
| CATACTGAAAACCATGCTCA+GGG | + | chr3.4:72500468-72500487 | None:intergenic | 40.0% | |
| CCTGAAGAATTCCTTCGAAA+AGG | + | chr3.4:72501393-72501412 | None:intergenic | 40.0% | |
| CTAAAGTACACATCTTCTCC+TGG | + | chr3.4:72500316-72500335 | None:intergenic | 40.0% | |
| CTACAGTTCAGTCACTGTAA+AGG | - | chr3.4:72499822-72499841 | MS.gene29850:CDS | 40.0% | |
| GATCAACATTGTGAGAGATG+CGG | - | chr3.4:72501915-72501934 | MS.gene29850:CDS | 40.0% | |
| GATCAGCCTATGATTCTTAC+CGG | - | chr3.4:72500760-72500779 | MS.gene29850:CDS | 40.0% | |
| GATTTACAAGCTCTACCTCA+AGG | - | chr3.4:72502150-72502169 | MS.gene29850:intron | 40.0% | |
| GGATGATTCAGCAAATTACG+AGG | - | chr3.4:72502059-72502078 | MS.gene29850:CDS | 40.0% | |
| GGTCAGCATACAATTCAATG+CGG | + | chr3.4:72501537-72501556 | None:intergenic | 40.0% | |
| GTAGCTAAGCCACTTCAAAA+TGG | + | chr3.4:72500917-72500936 | None:intergenic | 40.0% | |
| GTAGGATTTGAACTCTTGAG+TGG | - | chr3.4:72500607-72500626 | MS.gene29850:intron | 40.0% | |
| GTTAAAGGAAAGTGGCTGAA+AGG | - | chr3.4:72501061-72501080 | MS.gene29850:CDS | 40.0% | |
| GTTGACAAATATTGGCGACT+CGG | - | chr3.4:72502122-72502141 | MS.gene29850:CDS | 40.0% | |
| TAAAGGTAATGCCGTTGAAC+CGG | - | chr3.4:72501564-72501583 | MS.gene29850:intron | 40.0% | |
| TACATTCCTTCTCATGTAGG+TGG | - | chr3.4:72500934-72500953 | MS.gene29850:CDS | 40.0% | |
| TCAGATATATCGAGAGATGG+AGG | - | chr3.4:72499777-72499796 | MS.gene29850:CDS | 40.0% | |
| TCCATATCCTTTGCCAAGAA+TGG | + | chr3.4:72500587-72500606 | None:intergenic | 40.0% | |
| TCCTTAAGAATGGCTGCAAA+GGG | - | chr3.4:72501808-72501827 | MS.gene29850:intron | 40.0% | |
| TGAATTGTATGCTGACCGAA+CGG | - | chr3.4:72501540-72501559 | MS.gene29850:intron | 40.0% | |
| TGGGTTGCTTGTATGTTCTT+AGG | + | chr3.4:72501438-72501457 | None:intergenic | 40.0% | |
| TTCAAATGACGTGACCTTCA+AGG | - | chr3.4:72500276-72500295 | MS.gene29850:CDS | 40.0% | |
| TTCCTTAAGAATGGCTGCAA+AGG | - | chr3.4:72501807-72501826 | MS.gene29850:intron | 40.0% | |
| TTGAACTCTTGAGTGGTAGT+GGG | - | chr3.4:72500614-72500633 | MS.gene29850:CDS | 40.0% | |
| TTTACACTGACATATGCGTC+CGG | - | chr3.4:72500676-72500695 | MS.gene29850:CDS | 40.0% | |
| TTTGAACTCTTGAGTGGTAG+TGG | - | chr3.4:72500613-72500632 | MS.gene29850:CDS | 40.0% | |
| TTTGCTTGCGGATGATATAG+AGG | + | chr3.4:72499304-72499323 | None:intergenic | 40.0% | |
| ! | ACTTGGTGGACCTAAAATCA+TGG | - | chr3.4:72500837-72500856 | MS.gene29850:CDS | 40.0% |
| ! | CACTTTTCATTCTCGCAAAC+TGG | - | chr3.4:72501341-72501360 | MS.gene29850:CDS | 40.0% |
| ! | CCTTTTCGAAGGAATTCTTC+AGG | - | chr3.4:72501390-72501409 | MS.gene29850:CDS | 40.0% |
| ! | GAAACAAGCTTTAACCTCCT+CGG | + | chr3.4:72500419-72500438 | None:intergenic | 40.0% |
| ! | GAATTGGTGCTTATCTTGCA+AGG | - | chr3.4:72500710-72500729 | MS.gene29850:CDS | 40.0% |
| ! | GGATCAATGGGCTTTACAAT+GGG | + | chr3.4:72500967-72500986 | None:intergenic | 40.0% |
| ! | TCTTTTATCGGAGATTGCAC+AGG | - | chr3.4:72501872-72501891 | MS.gene29850:intron | 40.0% |
| ! | TTATCGATTGGCGTAACTCA+CGG | - | chr3.4:72501845-72501864 | MS.gene29850:intron | 40.0% |
| ! | TTCTTGCTGCAAGACGTTTT+AGG | + | chr3.4:72499903-72499922 | None:intergenic | 40.0% |
| !! | AAGCTTTGGATTACAGCATG+TGG | - | chr3.4:72499572-72499591 | MS.gene29850:CDS | 40.0% |
| !! | GCGTTTCTTCCATTTTGAAG+TGG | - | chr3.4:72500905-72500924 | MS.gene29850:CDS | 40.0% |
| !! | TCAGAGAAAGAAGGTATCGA+GGG | - | chr3.4:72500139-72500158 | MS.gene29850:intron | 40.0% |
| !! | TTCAGAGAAAGAAGGTATCG+AGG | - | chr3.4:72500138-72500157 | MS.gene29850:intron | 40.0% |
| !!! | TGAGCTCTGTTACTTTTAGG+AGG | + | chr3.4:72500114-72500133 | None:intergenic | 40.0% |
| AAATACTCCACTTCCCTCTG+TGG | + | chr3.4:72500992-72501011 | None:intergenic | 45.0% | |
| AATACTCCACTTCCCTCTGT+GGG | + | chr3.4:72500991-72501010 | None:intergenic | 45.0% | |
| AATCCCTGTGGGAATTGTTG+CGG | - | chr3.4:72501165-72501184 | MS.gene29850:CDS | 45.0% | |
| AATCTTGGAAGATCTGGCAC+GGG | - | chr3.4:72499490-72499509 | MS.gene29850:CDS | 45.0% | |
| ACAAGCAAATGGTGCTTGGA+GGG | - | chr3.4:72499595-72499614 | MS.gene29850:CDS | 45.0% | |
| ACAGCATGTGGACAAGCAAA+TGG | - | chr3.4:72499584-72499603 | MS.gene29850:CDS | 45.0% | |
| ACCCTTTGCAGCCATTCTTA+AGG | + | chr3.4:72501812-72501831 | None:intergenic | 45.0% | |
| ACGATGAAGCCTTCTTCAGA+TGG | - | chr3.4:72502034-72502053 | MS.gene29850:CDS | 45.0% | |
| ACTGTAGACCACGTTATGAG+TGG | + | chr3.4:72499809-72499828 | None:intergenic | 45.0% | |
| AGAAGGTGAAAGTTGTGGCA+TGG | + | chr3.4:72499703-72499722 | None:intergenic | 45.0% | |
| AGGTAGTGAAGATGCTTGGT+TGG | - | chr3.4:72502011-72502030 | MS.gene29850:CDS | 45.0% | |
| ATCATCCCTCCATCTGAAGA+AGG | + | chr3.4:72502046-72502065 | None:intergenic | 45.0% | |
| ATGAAGCCTTCTTCAGATGG+AGG | - | chr3.4:72502037-72502056 | MS.gene29850:CDS | 45.0% | |
| ATGATGTTGGCATGGTATCC+TGG | - | chr3.4:72500200-72500219 | MS.gene29850:CDS | 45.0% | |
| ATGCCAACATCATTGAGTCC+AGG | + | chr3.4:72500193-72500212 | None:intergenic | 45.0% | |
| CAAGGACAGTTGTTACAGGA+AGG | - | chr3.4:72501128-72501147 | MS.gene29850:CDS | 45.0% | |
| CAATCTTGGAAGATCTGGCA+CGG | - | chr3.4:72499489-72499508 | MS.gene29850:CDS | 45.0% | |
| CATCACGGATGATCCAATTC+GGG | + | chr3.4:72500515-72500534 | None:intergenic | 45.0% | |
| CCAAAGGTAGTGAAGATGCT+TGG | - | chr3.4:72502007-72502026 | MS.gene29850:CDS | 45.0% | |
| CCAAGCATCTTCACTACCTT+TGG | + | chr3.4:72502010-72502029 | None:intergenic | 45.0% | |
| CCAATATTGTCCTTCCAGAC+GGG | + | chr3.4:72500252-72500271 | None:intergenic | 45.0% | |
| CCATCACGGATGATCCAATT+CGG | + | chr3.4:72500516-72500535 | None:intergenic | 45.0% | |
| CCATTCTTTGAGCAAGTTCG+TGG | + | chr3.4:72501968-72501987 | None:intergenic | 45.0% | |
| CGTACACATTTCCATCAACC+AGG | + | chr3.4:72500221-72500240 | None:intergenic | 45.0% | |
| CTTGGCAAAGGATATGGAGT+AGG | - | chr3.4:72500589-72500608 | MS.gene29850:intron | 45.0% | |
| GAGGAATTTAACCCTGAGCA+TGG | - | chr3.4:72500454-72500473 | MS.gene29850:CDS | 45.0% | |
| GCAGTCTTGGTTGAAGAATC+AGG | + | chr3.4:72501286-72501305 | None:intergenic | 45.0% | |
| GCCAAGAGTAACAAAGACTC+TGG | - | chr3.4:72501685-72501704 | MS.gene29850:CDS | 45.0% | |
| GGACGCATATGTCAGTGTAA+AGG | + | chr3.4:72500677-72500696 | None:intergenic | 45.0% | |
| GTGCTTATCTTGCAAGGCTT+GGG | - | chr3.4:72500716-72500735 | MS.gene29850:CDS | 45.0% | |
| TACAGCTCTCAGATGCAACT+TGG | - | chr3.4:72500820-72500839 | MS.gene29850:CDS | 45.0% | |
| TCAACTGAAGCAACAGTCTC+TGG | + | chr3.4:72502107-72502126 | None:intergenic | 45.0% | |
| TCAAGCTGACATGGATCAGT+AGG | + | chr3.4:72501220-72501239 | None:intergenic | 45.0% | |
| TCAGCTTGATTCTCACGAGA+GGG | - | chr3.4:72501231-72501250 | MS.gene29850:CDS | 45.0% | |
| TCCAATTCGGGCATAATCCT+CGG | + | chr3.4:72500503-72500522 | None:intergenic | 45.0% | |
| TCCGGTACAACTGTTGGAAT+TGG | - | chr3.4:72500694-72500713 | MS.gene29850:CDS | 45.0% | |
| TCGTGAGAATCAAGCTGACA+TGG | + | chr3.4:72501229-72501248 | None:intergenic | 45.0% | |
| TGAAGCCTTCTTCAGATGGA+GGG | - | chr3.4:72502038-72502057 | MS.gene29850:CDS | 45.0% | |
| TGAGGCAATCTTGGAAGATC+TGG | - | chr3.4:72499484-72499503 | MS.gene29850:CDS | 45.0% | |
| TGGACTCAATGATGTTGGCA+TGG | - | chr3.4:72500192-72500211 | MS.gene29850:CDS | 45.0% | |
| TGTGGAGACACTAGAAGGAT+GGG | - | chr3.4:72501105-72501124 | MS.gene29850:CDS | 45.0% | |
| TTCATTCTCGCAAACTGGAG+AGG | - | chr3.4:72501346-72501365 | MS.gene29850:CDS | 45.0% | |
| TTCGAAGGAATTCTTCAGGC+TGG | - | chr3.4:72501394-72501413 | MS.gene29850:CDS | 45.0% | |
| TTCTTACACCGACAGAGGAA+TGG | + | chr3.4:72499520-72499539 | None:intergenic | 45.0% | |
| TTGGGATGAGATGCATTCAG+AGG | - | chr3.4:72500734-72500753 | MS.gene29850:CDS | 45.0% | |
| TTGTGGAGACACTAGAAGGA+TGG | - | chr3.4:72501104-72501123 | MS.gene29850:CDS | 45.0% | |
| ! | AAGCTTGTTTCAGAGTCGGT+TGG | - | chr3.4:72500428-72500447 | MS.gene29850:CDS | 45.0% |
| ! | AGCTTTGTGGAGACACTAGA+AGG | - | chr3.4:72501100-72501119 | MS.gene29850:CDS | 45.0% |
| ! | AGGGAAGTGGAGTATTTACC+GGG | - | chr3.4:72500995-72501014 | MS.gene29850:CDS | 45.0% |
| ! | CCACGAACTTGCTCAAAGAA+TGG | - | chr3.4:72501965-72501984 | MS.gene29850:CDS | 45.0% |
| ! | GAGGGAAGTGGAGTATTTAC+CGG | - | chr3.4:72500994-72501013 | MS.gene29850:CDS | 45.0% |
| ! | GGGATCAATGGGCTTTACAA+TGG | + | chr3.4:72500968-72500987 | None:intergenic | 45.0% |
| ! | TCAGGCTGGTTCAACTATTG+TGG | - | chr3.4:72501408-72501427 | MS.gene29850:CDS | 45.0% |
| ! | TGAACTCTTGAGTGGTAGTG+GGG | - | chr3.4:72500615-72500634 | MS.gene29850:CDS | 45.0% |
| AACATTGTGAGAGATGCGGC+TGG | - | chr3.4:72501919-72501938 | MS.gene29850:CDS | 50.0% | |
| AATGACGTGACCTTCAAGGC+CGG | - | chr3.4:72500280-72500299 | MS.gene29850:CDS | 50.0% | |
| ACAGTTTCGGACGACCTTGA+AGG | - | chr3.4:72500883-72500902 | MS.gene29850:CDS | 50.0% | |
| ACGTTTGGCAGGAACAAGAG+GGG | + | chr3.4:72500167-72500186 | None:intergenic | 50.0% | |
| AGACACTAGAAGGATGGGCA+AGG | - | chr3.4:72501110-72501129 | MS.gene29850:CDS | 50.0% | |
| AGCTCTCAGATGCAACTTGG+TGG | - | chr3.4:72500823-72500842 | MS.gene29850:CDS | 50.0% | |
| AGGTGAAAGTTGTGGCATGG+AGG | + | chr3.4:72499700-72499719 | None:intergenic | 50.0% | |
| AGTGCACCACCTACATGAGA+AGG | + | chr3.4:72500943-72500962 | None:intergenic | 50.0% | |
| ATACTCCACTTCCCTCTGTG+GGG | + | chr3.4:72500990-72501009 | None:intergenic | 50.0% | |
| ATCAGGAAACCAGACTTGGC+CGG | + | chr3.4:72501269-72501288 | None:intergenic | 50.0% | |
| ATTGAGTCCAGGAGGACGTT+TGG | + | chr3.4:72500182-72500201 | None:intergenic | 50.0% | |
| CAAGACTGCCCAAGCGATAT+TGG | - | chr3.4:72501297-72501316 | MS.gene29850:CDS | 50.0% | |
| CAATATCGCTTGGGCAGTCT+TGG | + | chr3.4:72501299-72501318 | None:intergenic | 50.0% | |
| CATTGCCGGTGCCTATTCAA+GGG | - | chr3.4:72500639-72500658 | MS.gene29850:CDS | 50.0% | |
| CCAACATCATTGAGTCCAGG+AGG | + | chr3.4:72500190-72500209 | None:intergenic | 50.0% | |
| CCAATTCGGGCATAATCCTC+GGG | + | chr3.4:72500502-72500521 | None:intergenic | 50.0% | |
| CCCGTCTGGAAGGACAATAT+TGG | - | chr3.4:72500249-72500268 | MS.gene29850:CDS | 50.0% | |
| CCGAATTGGATCATCCGTGA+TGG | - | chr3.4:72500513-72500532 | MS.gene29850:CDS | 50.0% | |
| CCTCCTGGACTCAATGATGT+TGG | - | chr3.4:72500187-72500206 | MS.gene29850:CDS | 50.0% | |
| CGAGGATCGCATGAATTTCC+CGG | + | chr3.4:72501016-72501035 | None:intergenic | 50.0% | |
| CGGAGATTGCACAGGAGAAT+CGG | - | chr3.4:72501880-72501899 | MS.gene29850:intron | 50.0% | |
| CGGCATTACCTTTAGCCGTT+CGG | + | chr3.4:72501558-72501577 | None:intergenic | 50.0% | |
| CGGGAAATCCATTCCTCTGT+CGG | - | chr3.4:72499509-72499528 | MS.gene29850:CDS | 50.0% | |
| CTACCGCAACAATTCCCACA+GGG | + | chr3.4:72501171-72501190 | None:intergenic | 50.0% | |
| CTCAGAGTGCACCCATCATT+GGG | + | chr3.4:72501474-72501493 | None:intergenic | 50.0% | |
| GACAAGCAAATGGTGCTTGG+AGG | - | chr3.4:72499594-72499613 | MS.gene29850:CDS | 50.0% | |
| GACGTTTGGCAGGAACAAGA+GGG | + | chr3.4:72500168-72500187 | None:intergenic | 50.0% | |
| GCTGACAGTCGAATCAACTC+TGG | - | chr3.4:72501511-72501530 | MS.gene29850:intron | 50.0% | |
| GGTGCTTATCTTGCAAGGCT+TGG | - | chr3.4:72500715-72500734 | MS.gene29850:CDS | 50.0% | |
| GTAGACCACGTTATGAGTGG+TGG | + | chr3.4:72499806-72499825 | None:intergenic | 50.0% | |
| GTATGCCCTTGAATAGGCAC+CGG | + | chr3.4:72500647-72500666 | None:intergenic | 50.0% | |
| GTCAGCTTGATTCTCACGAG+AGG | - | chr3.4:72501230-72501249 | MS.gene29850:CDS | 50.0% | |
| GTGCATTCTTACACCGACAG+AGG | + | chr3.4:72499525-72499544 | None:intergenic | 50.0% | |
| GTGGACAAGCAAATGGTGCT+TGG | - | chr3.4:72499591-72499610 | MS.gene29850:CDS | 50.0% | |
| GTTACAGGAAGGGCAAAGCT+TGG | - | chr3.4:72501139-72501158 | MS.gene29850:CDS | 50.0% | |
| TATGCGTCCGGTACAACTGT+TGG | - | chr3.4:72500688-72500707 | MS.gene29850:CDS | 50.0% | |
| TATGCTGACCGAACGGCTAA+AGG | - | chr3.4:72501547-72501566 | MS.gene29850:intron | 50.0% | |
| TCTACCGCAACAATTCCCAC+AGG | + | chr3.4:72501172-72501191 | None:intergenic | 50.0% | |
| TGGCATGGTATCCTGGTTGA+TGG | - | chr3.4:72500207-72500226 | MS.gene29850:CDS | 50.0% | |
| TGGGCAAGGACAGTTGTTAC+AGG | - | chr3.4:72501124-72501143 | MS.gene29850:CDS | 50.0% | |
| TTCACTGGTACACCATGCAG+CGG | + | chr3.4:72499850-72499869 | None:intergenic | 50.0% | |
| TTCTCCTGGGCCAAAAGAAC+CGG | + | chr3.4:72500302-72500321 | None:intergenic | 50.0% | |
| TTCTGGTGCCCGTTTAAGTG+TGG | - | chr3.4:72500393-72500412 | MS.gene29850:CDS | 50.0% | |
| TTGTGTGGGACGTCAAGCTT+TGG | - | chr3.4:72499558-72499577 | MS.gene29850:CDS | 50.0% | |
| ! | AAAGCTTGGTGGAATCCCTG+TGG | - | chr3.4:72501153-72501172 | MS.gene29850:CDS | 50.0% |
| ! | AAGCTTGGTGGAATCCCTGT+GGG | - | chr3.4:72501154-72501173 | MS.gene29850:CDS | 50.0% |
| ! | TCTTGCCGCCCTTTTAAGCA+AGG | - | chr3.4:72502173-72502192 | MS.gene29850:intron | 50.0% |
| !! | ACCTTCAAGGCCGGTTCTTT+TGG | - | chr3.4:72500289-72500308 | MS.gene29850:CDS | 50.0% |
| !! | TTTCAGAGTCGGTTGGTCTG+AGG | - | chr3.4:72500435-72500454 | MS.gene29850:CDS | 50.0% |
| AAAAGGGCGGCAAGACCTTG+AGG | + | chr3.4:72502168-72502187 | None:intergenic | 55.0% | |
| ACAGGAAGGGCAAAGCTTGG+TGG | - | chr3.4:72501142-72501161 | MS.gene29850:CDS | 55.0% | |
| ACTGTAAAGGGTCCGCTGCA+TGG | - | chr3.4:72499835-72499854 | MS.gene29850:CDS | 55.0% | |
| CCATTGCCGGTGCCTATTCA+AGG | - | chr3.4:72500638-72500657 | MS.gene29850:CDS | 55.0% | |
| CCCGAGGATTATGCCCGAAT+TGG | - | chr3.4:72500499-72500518 | MS.gene29850:CDS | 55.0% | |
| CCTCAGAGTGCACCCATCAT+TGG | + | chr3.4:72501475-72501494 | None:intergenic | 55.0% | |
| CCTCCTCGGCCACACTTAAA+CGG | + | chr3.4:72500405-72500424 | None:intergenic | 55.0% | |
| CGCAAACTGGAGAGGCTTTG+CGG | - | chr3.4:72501354-72501373 | MS.gene29850:CDS | 55.0% | |
| CTCCTCGGCCACACTTAAAC+GGG | + | chr3.4:72500404-72500423 | None:intergenic | 55.0% | |
| GAGAGGGTTGTTCCTCAAGC+CGG | - | chr3.4:72501247-72501266 | MS.gene29850:CDS | 55.0% | |
| GCAAACTGGAGAGGCTTTGC+GGG | - | chr3.4:72501355-72501374 | MS.gene29850:CDS | 55.0% | |
| GCCAAAAGAACCGGCCTTGA+AGG | + | chr3.4:72500293-72500312 | None:intergenic | 55.0% | |
| GGACGTTTGGCAGGAACAAG+AGG | + | chr3.4:72500169-72500188 | None:intergenic | 55.0% | |
| GGATGCCACCACTCATAACG+TGG | - | chr3.4:72499798-72499817 | MS.gene29850:CDS | 55.0% | |
| GGTAATGCCGTTGAACCGGA+AGG | - | chr3.4:72501568-72501587 | MS.gene29850:intron | 55.0% | |
| GTCCTTCCAGACGGGAATTC+AGG | + | chr3.4:72500244-72500263 | None:intergenic | 55.0% | |
| GTTCCAGAAATGGCAGCACG+AGG | + | chr3.4:72501034-72501053 | None:intergenic | 55.0% | |
| TACTCCACTTCCCTCTGTGG+GGG | + | chr3.4:72500989-72501008 | None:intergenic | 55.0% | |
| TGTACGCCTGAATTCCCGTC+TGG | - | chr3.4:72500235-72500254 | MS.gene29850:CDS | 55.0% | |
| ! | GATCCTCGTGCTGCCATTTC+TGG | - | chr3.4:72501028-72501047 | MS.gene29850:CDS | 55.0% |
| ! | GGGCAAAGGGACCTTTTCGA+AGG | - | chr3.4:72501379-72501398 | MS.gene29850:CDS | 55.0% |
| !! | ATGATGGGTGCACTCTGAGG+TGG | - | chr3.4:72501475-72501494 | MS.gene29850:CDS | 55.0% |
| !! | CCAATGATGGGTGCACTCTG+AGG | - | chr3.4:72501472-72501491 | MS.gene29850:CDS | 55.0% |
| !! | CCTTGAATAGGCACCGGCAA+TGG | + | chr3.4:72500641-72500660 | None:intergenic | 55.0% |
| !! | TGATGGGTGCACTCTGAGGT+GGG | - | chr3.4:72501476-72501495 | MS.gene29850:CDS | 55.0% |
| AACTGGAGAGGCTTTGCGGG+TGG | - | chr3.4:72501358-72501377 | MS.gene29850:CDS | 60.0% | |
| ACTCCACTTCCCTCTGTGGG+GGG | + | chr3.4:72500988-72501007 | None:intergenic | 60.0% | |
| ACTGGAGAGGCTTTGCGGGT+GGG | - | chr3.4:72501359-72501378 | MS.gene29850:CDS | 60.0% | |
| AGGCTTTGCGGGTGGGCAAA+GGG | - | chr3.4:72501366-72501385 | MS.gene29850:CDS | 60.0% | |
| AGTCCAGGAGGACGTTTGGC+AGG | + | chr3.4:72500178-72500197 | None:intergenic | 60.0% | |
| CCCATTGATCCCCCCACAGA+GGG | - | chr3.4:72500976-72500995 | MS.gene29850:CDS | 60.0% | |
| CCCTCTGTGGGGGGATCAAT+GGG | + | chr3.4:72500979-72500998 | None:intergenic | 60.0% | |
| CCGTTTAAGTGTGGCCGAGG+AGG | - | chr3.4:72500402-72500421 | MS.gene29850:CDS | 60.0% | |
| CGCCTGAATTCCCGTCTGGA+AGG | - | chr3.4:72500239-72500258 | MS.gene29850:CDS | 60.0% | |
| GTTCCTGCCAAACGTCCTCC+TGG | - | chr3.4:72500172-72500191 | MS.gene29850:CDS | 60.0% | |
| TCCCTCTGTGGGGGGATCAA+TGG | + | chr3.4:72500980-72500999 | None:intergenic | 60.0% | |
| TGCCCGTTTAAGTGTGGCCG+AGG | - | chr3.4:72500399-72500418 | MS.gene29850:CDS | 60.0% | |
| TTCCTCAAGCCGGCCAAGTC+TGG | - | chr3.4:72501257-72501276 | MS.gene29850:CDS | 60.0% | |
| !! | AACCAGACTTGGCCGGCTTG+AGG | + | chr3.4:72501262-72501281 | None:intergenic | 60.0% |
| !! | AAGGCCGGTTCTTTTGGCCC+AGG | - | chr3.4:72500295-72500314 | MS.gene29850:CDS | 60.0% |
| !! | AGTGGTAGTGGGGCCATTGC+CGG | - | chr3.4:72500625-72500644 | MS.gene29850:CDS | 60.0% |
| !! | GATGGGTGCACTCTGAGGTG+GGG | - | chr3.4:72501477-72501496 | MS.gene29850:CDS | 60.0% |
| !! | TGCACTCTGAGGTGGGGCTT+GGG | - | chr3.4:72501483-72501502 | MS.gene29850:CDS | 60.0% |
| GAGGCTTTGCGGGTGGGCAA+AGG | - | chr3.4:72501365-72501384 | MS.gene29850:CDS | 65.0% | |
| GATCCCCCCACAGAGGGAAG+TGG | - | chr3.4:72500982-72501001 | MS.gene29850:CDS | 65.0% | |
| GCCCATTGATCCCCCCACAG+AGG | - | chr3.4:72500975-72500994 | MS.gene29850:CDS | 65.0% | |
| !! | GTGCACTCTGAGGTGGGGCT+TGG | - | chr3.4:72501482-72501501 | MS.gene29850:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 72499239 | 72502319 | 72499239 | ID=MS.gene29850 |
| chr3.4 | mRNA | 72499239 | 72502319 | 72499239 | ID=MS.gene29850.t1;Parent=MS.gene29850 |
| chr3.4 | exon | 72502233 | 72502319 | 72502233 | ID=MS.gene29850.t1.exon1;Parent=MS.gene29850.t1 |
| chr3.4 | CDS | 72502233 | 72502319 | 72502233 | ID=cds.MS.gene29850.t1;Parent=MS.gene29850.t1 |
| chr3.4 | exon | 72501900 | 72502166 | 72501900 | ID=MS.gene29850.t1.exon2;Parent=MS.gene29850.t1 |
| chr3.4 | CDS | 72501900 | 72502166 | 72501900 | ID=cds.MS.gene29850.t1;Parent=MS.gene29850.t1 |
| chr3.4 | exon | 72501601 | 72501777 | 72501601 | ID=MS.gene29850.t1.exon3;Parent=MS.gene29850.t1 |
| chr3.4 | CDS | 72501601 | 72501777 | 72501601 | ID=cds.MS.gene29850.t1;Parent=MS.gene29850.t1 |
| chr3.4 | exon | 72500610 | 72501518 | 72500610 | ID=MS.gene29850.t1.exon4;Parent=MS.gene29850.t1 |
| chr3.4 | CDS | 72500610 | 72501518 | 72500610 | ID=cds.MS.gene29850.t1;Parent=MS.gene29850.t1 |
| chr3.4 | exon | 72500143 | 72500563 | 72500143 | ID=MS.gene29850.t1.exon5;Parent=MS.gene29850.t1 |
| chr3.4 | CDS | 72500143 | 72500563 | 72500143 | ID=cds.MS.gene29850.t1;Parent=MS.gene29850.t1 |
| chr3.4 | exon | 72499364 | 72500064 | 72499364 | ID=MS.gene29850.t1.exon6;Parent=MS.gene29850.t1 |
| chr3.4 | CDS | 72499364 | 72500064 | 72499364 | ID=cds.MS.gene29850.t1;Parent=MS.gene29850.t1 |
| chr3.4 | exon | 72499239 | 72499250 | 72499239 | ID=MS.gene29850.t1.exon7;Parent=MS.gene29850.t1 |
| chr3.4 | CDS | 72499239 | 72499250 | 72499239 | ID=cds.MS.gene29850.t1;Parent=MS.gene29850.t1 |
| Gene Sequence |
| Protein sequence |
