AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30580.t1 MTR_3g050860 71.123 374 75 5 647 1020 2 342 1.64e-159 476
MS.gene30580.t1 MTR_3g050860 53.699 365 131 7 1 347 1 345 2.84e-105 334
MS.gene30580.t1 MTR_3g050860 68.889 225 68 2 413 637 2 224 8.93e-92 298
MS.gene30580.t1 MTR_0439s0020 69.444 144 42 2 1 143 1 143 4.71e-59 199
MS.gene30580.t1 MTR_0439s0020 60.563 142 54 2 648 788 3 143 5.41e-48 168
MS.gene30580.t1 MTR_0439s0020 59.859 142 55 2 414 554 3 143 7.41e-47 164
MS.gene30580.t1 MTR_4g074930 71.429 112 32 0 920 1031 315 426 2.03e-45 174
MS.gene30580.t1 MTR_4g074930 49.580 119 51 2 250 363 329 443 6.76e-22 102
MS.gene30580.t1 MTR_4g074930 71.429 112 32 0 920 1031 350 461 2.85e-45 174
MS.gene30580.t1 MTR_4g074930 49.580 119 51 2 250 363 364 478 6.76e-22 102
MS.gene30580.t1 MTR_4g074930 71.429 112 32 0 920 1031 327 438 2.88e-45 174
MS.gene30580.t1 MTR_4g074930 49.580 119 51 2 250 363 341 455 7.70e-22 101
MS.gene30580.t1 MTR_4g074930 71.429 112 32 0 920 1031 362 473 3.35e-45 174
MS.gene30580.t1 MTR_4g074930 49.580 119 51 2 250 363 376 490 6.93e-22 102
MS.gene30580.t1 MTR_1g036430 34.310 239 116 7 805 1016 20 244 2.66e-25 113
MS.gene30580.t1 MTR_1g036430 49.057 106 53 1 913 1017 271 376 3.85e-24 109
MS.gene30580.t1 MTR_3g034200 37.815 119 68 5 450 565 42 157 1.57e-12 67.8
MS.gene30580.t1 MTR_3g034200 36.975 119 69 5 684 799 42 157 5.89e-11 63.2
MS.gene30580.t1 MTR_1g073000 38.158 76 47 0 934 1009 94 169 7.63e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30580.t1 AT3G18610 49.580 119 55 3 903 1019 292 407 1.49e-25 113
MS.gene30580.t1 AT3G18610 39.231 130 66 4 239 363 313 434 2.44e-13 74.7
MS.gene30580.t1 AT1G48920 45.283 106 50 3 921 1019 285 389 6.40e-23 105
MS.gene30580.t1 AT1G48920 35.659 129 69 4 245 363 292 416 2.95e-11 67.8
MS.gene30580.t1 AT3G18610 39.231 130 66 4 239 363 373 494 2.22e-13 75.1
MS.gene30580.t1 AT3G18610 39.231 130 66 4 239 363 343 464 2.49e-13 74.7
MS.gene30580.t1 AT1G45100 39.450 109 59 1 934 1042 247 348 1.61e-11 68.6

Find 278 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCTTGCATAACGAATTT+TGG 0.055280 3.3:+41589105 None:intergenic
ATATCTTGCATAACGAATTT+TGG 0.106940 3.3:+41585232 None:intergenic
TGTGGGTGCACTCCCTATTT+TGG 0.176284 3.3:+41582014 None:intergenic
GAAGCTGTTTCTTCTAAAAT+AGG 0.182499 3.3:-41589605 MS.gene30580:CDS
GAAGCTGTTCCTTCTAAAAT+AGG 0.185699 3.3:-41592499 MS.gene30580:CDS
CGTAAGGATGGAAAGCTTAA+AGG 0.185777 3.3:-41581205 MS.gene30580:CDS
AGTAATTACCTGTTATTATT+AGG 0.205492 3.3:+41580946 None:intergenic
GAAGCTGTTCCTTCTAAAAT+AGG 0.214473 3.3:-41585564 MS.gene30580:CDS
GAAGTTGTTCCTTCCAAAAT+AGG 0.222125 3.3:-41582027 MS.gene30580:CDS
GAAGAAACAGCTTCTGCTTC+AGG 0.224450 3.3:+41589614 None:intergenic
GAAGGAACAGCTTCTGCTTC+AGG 0.236329 3.3:+41585573 None:intergenic
GGAGGCTTTGTCAGGGGTTT+TGG 0.242686 3.3:-41590450 MS.gene30580:CDS
AGGTGAAGGTATTACATCTT+AGG 0.254032 3.3:-41592670 MS.gene30580:CDS
ACTCCTTCTCTTCGAAAGAT+AGG 0.311076 3.3:+41588860 None:intergenic
GAACTATCAGCTTTCTTTGC+GGG 0.320443 3.3:+41592469 None:intergenic
GAACTATCAGCTTTGTTTGC+GGG 0.323479 3.3:+41585534 None:intergenic
TGTCCTCTTCGCCGAAAGAT+AGG 0.332201 3.3:+41593354 None:intergenic
TGTTGACCTATATAAGATTC+TGG 0.336459 3.3:-41593541 MS.gene30580:CDS
ACTCCTTCTCTCCGAAAGAT+AGG 0.337370 3.3:+41584987 None:intergenic
ATGTGTCAGTGTTGGTCTTC+GGG 0.346207 3.3:+41593138 None:intergenic
GAACTATCAGCCTTCTTTGT+GGG 0.346717 3.3:+41581997 None:intergenic
TGACGTGGATCTTGAAAGTT+TGG 0.353226 3.3:-41585135 MS.gene30580:CDS
TGACGTGGATCTTGAAAGTT+TGG 0.353226 3.3:-41589008 MS.gene30580:CDS
TTCTACAACGATGGTGTCCC+CGG 0.363342 3.3:-41593589 None:intergenic
ATGTCGAGAGCTTACGCGTT+TGG 0.366733 3.3:+41590801 None:intergenic
AAGCTGTTTCTTCTAAAATA+GGG 0.371461 3.3:-41589604 MS.gene30580:CDS
GCGTTTCTTAAGACCACATT+CGG 0.376403 3.3:+41585203 None:intergenic
GTGGCGGAGGAGGCTTTGTC+AGG 0.376610 3.3:-41590458 MS.gene30580:CDS
TTGGTTATGGTAAGAGAAAA+AGG 0.378545 3.3:-41590867 MS.gene30580:CDS
ATCCATCAGAGTTGGTCTTC+GGG 0.379295 3.3:+41584679 None:intergenic
GTCAGATTCTTGCGCCTTGA+AGG 0.379387 3.3:+41591011 None:intergenic
ATCCATCAGAGTTGGTCTTC+GGG 0.381778 3.3:+41588550 None:intergenic
CGGTTTAGAAGATGCCCTTC+AGG 0.382167 3.3:+41579342 None:intergenic
ATTACTCTTCTTCGAAAAGA+TGG 0.385014 3.3:-41593117 MS.gene30580:CDS
AATGTGTCAGTGTTGGTCTT+CGG 0.389493 3.3:+41593137 None:intergenic
CATATACTCCTAATAATAAC+AGG 0.390293 3.3:-41580954 MS.gene30580:intron
CGTTTCTTAAGACCACATTC+GGG 0.392953 3.3:+41585204 None:intergenic
GATGGAAAGCTTAAAGGCTT+TGG 0.397596 3.3:-41581199 MS.gene30580:CDS
CCTTCAGGCTCGACTCTTGT+AGG 0.402549 3.3:+41579357 None:intergenic
TATTAGGCACTTAAGATGAA+TGG 0.404097 3.3:-41581030 MS.gene30580:intron
TCTTCGTTAGCCCTATCTTT+CGG 0.404121 3.3:-41593365 MS.gene30580:CDS
GCTGATGTATGTCTTGGTTA+TGG 0.405175 3.3:-41590880 MS.gene30580:CDS
GCTGATGAGGGGTAACTTTG+TGG 0.407304 3.3:+41579405 None:intergenic
AATAGGCACTTGATAAGAAT+GGG 0.408077 3.3:-41590671 MS.gene30580:intron
ATTTCAAGAGCTTACGTGTT+GGG 0.408962 3.3:+41581147 None:intergenic
TCACCTCATGAGGCTCGTTC+AGG 0.409656 3.3:+41592687 None:intergenic
GAGGATATGGACGCCACTCC+CGG 0.410021 3.3:+41590610 None:intergenic
ATTACTCTTCTTCGAAAAGA+TGG 0.410597 3.3:-41588529 MS.gene30580:CDS
TGACGTGGATACTCAAAGTT+TGG 0.414598 3.3:-41593502 MS.gene30580:CDS
GCGTTTCTTAAGACCACATC+CGG 0.415976 3.3:+41589076 None:intergenic
GGCAAGCTGAGGAAGAAGTC+AGG 0.416441 3.3:-41591207 MS.gene30580:CDS
TCCCCGGGTGTGGTCGTAAG+AGG 0.417532 3.3:-41593573 MS.gene30580:CDS
CTTTCATGAATTTGAGGATG+TGG 0.424929 3.3:-41582382 MS.gene30580:intron
AAGTTGTTCCTTCCAAAATA+GGG 0.425876 3.3:-41582026 MS.gene30580:CDS
AATCCATCAGAGTTGGTCTT+CGG 0.430864 3.3:+41584678 None:intergenic
AATCCATCAGAGTTGGTCTT+CGG 0.430864 3.3:+41588549 None:intergenic
TCTTCGTTAACCCTATCTTT+CGG 0.431368 3.3:-41584998 MS.gene30580:CDS
GTGGTCCAGGTAGGCTGATG+AGG 0.433856 3.3:+41579392 None:intergenic
GGGAGACGCTTAAGGAGATA+TGG 0.435407 3.3:-41579466 MS.gene30580:CDS
GTGAAGAGCAATTATATTGA+TGG 0.435563 3.3:-41588489 MS.gene30580:CDS
AACGATGGTGTCCCCGGGTG+TGG 0.437378 3.3:-41593583 None:intergenic
GTGAAGAGCAATAATATTGA+TGG 0.439003 3.3:-41584618 MS.gene30580:CDS
AGAATCTTATATAGGTCAAC+AGG 0.439517 3.3:+41593543 None:intergenic
TGTTGGGAACTTATCCTTCA+AGG 0.439527 3.3:-41591025 MS.gene30580:CDS
GACTGAAAAGGCCTTGGAAA+AGG 0.439535 3.3:-41593310 MS.gene30580:intron
GTGACGAGCAATAATATTGA+TGG 0.440918 3.3:-41593077 MS.gene30580:CDS
GAAAGTAGTCAAAATTAGTT+CGG 0.441030 3.3:-41582412 MS.gene30580:CDS
AAGGAACAGCTTCTGCTTCA+GGG 0.442621 3.3:+41585574 None:intergenic
ATTGCAGAGGGAGACGCTTA+AGG 0.445079 3.3:-41579474 MS.gene30580:CDS
AAGCTGTTCCTTCTAAAATA+GGG 0.446029 3.3:-41585563 MS.gene30580:CDS
TGAAAAGGACTTAAGGGATA+AGG 0.447385 3.3:-41584940 MS.gene30580:intron
GAAGGAACAGCTTCTACTGC+AGG 0.448517 3.3:+41592508 None:intergenic
AAGCTGTTCCTTCTAAAATA+GGG 0.450466 3.3:-41592498 MS.gene30580:CDS
TCAGAGTTGGTCTTCGGGAC+TGG 0.451223 3.3:+41584684 None:intergenic
AAGAAACAGCTTCTGCTTCA+GGG 0.451779 3.3:+41589615 None:intergenic
AAGCGCTGAAAAGGACTTAA+GGG 0.454905 3.3:-41584946 MS.gene30580:CDS
AAGCGCTGAAAAGGACTTAA+GGG 0.454905 3.3:-41588819 MS.gene30580:CDS
TAATAGGCACTTGATAAGAA+TGG 0.456193 3.3:-41590672 MS.gene30580:intron
GACTTGATTTAGCTCGGGAG+AGG 0.463792 3.3:-41580981 MS.gene30580:CDS
TGATTGTGTTCCTTTGTGCA+TGG 0.464253 3.3:+41579441 None:intergenic
TTACCCCTCATCAGCCTACC+TGG 0.464293 3.3:-41579397 MS.gene30580:CDS
GCAATGGATCATTATTCCCT+TGG 0.465564 3.3:+41579492 None:intergenic
ACTTGTGGAAAGCGCTGAAA+AGG 0.467490 3.3:-41584955 MS.gene30580:CDS
ACTTGTGGAAAGCGCTGAAA+AGG 0.467490 3.3:-41588828 MS.gene30580:CDS
GAACTGAAGCGTACTAGTTA+TGG 0.467500 3.3:-41593402 MS.gene30580:CDS
AAAGCGCTGAAAAGGACTTA+AGG 0.468986 3.3:-41584947 MS.gene30580:CDS
AAAGCGCTGAAAAGGACTTA+AGG 0.468986 3.3:-41588820 MS.gene30580:CDS
ATTAGGCACTTAAGATGAAT+GGG 0.473468 3.3:-41581029 MS.gene30580:intron
GAAGGAACAACTTCTGCAGC+AGG 0.474060 3.3:+41582036 None:intergenic
TCAGCTGAAAGTGGCGGAGG+AGG 0.475866 3.3:-41590468 MS.gene30580:CDS
CTTTCGAAGACAATATATGT+TGG 0.475870 3.3:-41591042 MS.gene30580:intron
TAAGAGTAATGGAGAGGATG+AGG 0.477121 3.3:-41590427 MS.gene30580:intron
TTTCGAAGACAATATATGTT+GGG 0.477167 3.3:-41591041 MS.gene30580:intron
TCAGAGTTGGTCTTCGGGAC+GGG 0.477721 3.3:+41588555 None:intergenic
TCTAATACCTCATCTTCATC+AGG 0.477800 3.3:+41592641 None:intergenic
AACTTCCTCGACTTCTTCCT+CGG 0.481269 3.3:+41582488 None:intergenic
GATCTTGAAAGTTTGGAGAA+TGG 0.482941 3.3:-41585128 MS.gene30580:CDS
GATCTTGAAAGTTTGGAGAA+TGG 0.482941 3.3:-41589001 MS.gene30580:CDS
TGGTCCAGGTAGGCTGATGA+GGG 0.483103 3.3:+41579393 None:intergenic
GATCGCAGTTGTGGTGGTCC+AGG 0.484468 3.3:+41579379 None:intergenic
TTACTCTTCTTCGAAAAGAT+GGG 0.485859 3.3:-41588528 MS.gene30580:CDS
TTACTCTTCTTCGAAAAGAT+GGG 0.492891 3.3:-41593116 MS.gene30580:CDS
GACTTCAAGAAGCCCGGGAG+TGG 0.494287 3.3:-41590623 MS.gene30580:CDS
GACCATGACTGAAAAGGCCT+TGG 0.497606 3.3:-41593316 MS.gene30580:CDS
CTTCGAAAAGATGGGGTATG+AGG 0.498568 3.3:-41593108 MS.gene30580:CDS
AACCCTATCTTTCGAAGAGA+AGG 0.502164 3.3:-41588863 MS.gene30580:CDS
CTGTCCGACTTGATTTAGCT+CGG 0.502487 3.3:-41580987 MS.gene30580:CDS
AACCCTATCTTTCGGAGAGA+AGG 0.502877 3.3:-41584990 MS.gene30580:CDS
GCGCCTCTTACGACCACACC+CGG 0.504726 3.3:+41593570 None:intergenic
GGAATCCTTTCATGAATTTG+AGG 0.505347 3.3:-41582388 MS.gene30580:CDS
GGTGAAGGTATTACATCTTA+GGG 0.505887 3.3:-41592669 MS.gene30580:CDS
AGAACTATCAGCCTTCTTTG+TGG 0.506188 3.3:+41581996 None:intergenic
AGTTTCTTCAAAGAAGCAAA+AGG 0.509361 3.3:-41582469 MS.gene30580:CDS
GGTTACATCGTCTTTGATGT+TGG 0.509911 3.3:-41593426 MS.gene30580:CDS
CATTCACCAGAATCTTATAT+AGG 0.510974 3.3:+41593535 None:intergenic
GATCTCCTAGGCATTATCTT+CGG 0.511416 3.3:-41593447 MS.gene30580:CDS
AGAGAACTGACCCTCGGCCA+AGG 0.513067 3.3:-41579509 MS.gene30580:CDS
ACTTGATTTAGCTCGGGAGA+GGG 0.513360 3.3:-41580980 MS.gene30580:CDS
AGTGACTTCAAAGAAGCAAA+AGG 0.513805 3.3:-41586627 MS.gene30580:CDS
CTCCTTCTCTTCGAAAGATA+GGG 0.514220 3.3:+41588861 None:intergenic
TGACCACAACCATTACTCTT+CGG 0.514416 3.3:+41585032 None:intergenic
TGACCACAACCATTACTCTT+CGG 0.514416 3.3:+41588905 None:intergenic
TGAGGTTGCTGCCAAACAAA+AGG 0.514624 3.3:-41591155 MS.gene30580:intron
ACTTGCGACCATGACTGAAA+AGG 0.515946 3.3:-41593322 MS.gene30580:CDS
AGAACTATCAGCTTTGTTTG+CGG 0.518002 3.3:+41585533 None:intergenic
ATGTGAAGACAATATATGTT+GGG 0.518266 3.3:-41581389 MS.gene30580:CDS
CGACATATTTAAGATTCTCG+TGG 0.520223 3.3:-41585171 MS.gene30580:CDS
CGACATATTTAAGATTCTCG+TGG 0.520223 3.3:-41589044 MS.gene30580:CDS
GATCATTATTCCCTTGGCCG+AGG 0.520841 3.3:+41579498 None:intergenic
TGAAAAGGACTTAAGGGATA+AGG 0.520915 3.3:-41588813 MS.gene30580:intron
GAGCAATAATATTGATGGGA+AGG 0.524325 3.3:-41584613 MS.gene30580:CDS
CGAAGAAGCTCAAGGGGAAG+CGG 0.524913 3.3:-41593025 MS.gene30580:CDS
CATGTGAAGACAATATATGT+TGG 0.525487 3.3:-41581390 MS.gene30580:CDS
TGAGGTTGCTGCTAAACAAA+AGG 0.528001 3.3:-41586597 MS.gene30580:intron
CTCTTGTAGGATCGCAGTTG+TGG 0.528701 3.3:+41579370 None:intergenic
AAAGTTGTTGCACCTAAAAG+TGG 0.528725 3.3:-41582248 MS.gene30580:CDS
TGTCCGACTTGATTTAGCTC+GGG 0.530721 3.3:-41580986 MS.gene30580:CDS
ATGGTTGCTGATGTATGTCT+TGG 0.533193 3.3:-41590886 MS.gene30580:CDS
GTCCCGAAGACCAACTCTGA+TGG 0.533742 3.3:-41584681 MS.gene30580:CDS
CGTCTTGCTTCTCGTAAGGA+TGG 0.533912 3.3:-41581217 MS.gene30580:CDS
GATACTCAAAGTTTGGTGAA+TGG 0.534335 3.3:-41593495 MS.gene30580:CDS
GATGGGGTATGAGGAGGAGG+CGG 0.535830 3.3:-41593099 MS.gene30580:CDS
TGTACGTCTTGCTTCTCGTA+AGG 0.536237 3.3:-41581221 MS.gene30580:CDS
GTCCCGAAGACCAACTCTGA+TGG 0.538106 3.3:-41588552 MS.gene30580:CDS
TGAGGTTGCTGCGAAACAAA+AGG 0.546798 3.3:-41582439 MS.gene30580:CDS
GTCCTCTTCGCCGAAAGATA+GGG 0.547160 3.3:+41593355 None:intergenic
ATCATTATTCCCTTGGCCGA+GGG 0.547324 3.3:+41579499 None:intergenic
ATGTCCGACTTCAAGAAGCC+CGG 0.547348 3.3:-41590629 MS.gene30580:CDS
TGAAGAGCAATTATATTGAT+GGG 0.547887 3.3:-41588488 MS.gene30580:CDS
GAGCAATTATATTGATGGGA+AGG 0.549182 3.3:-41588484 MS.gene30580:CDS
AGGAGTCGCTTCTAAACTTG+TGG 0.551270 3.3:-41584970 MS.gene30580:CDS
ATCAGAGTTGGTCTTCGGGA+CGG 0.551912 3.3:+41588554 None:intergenic
AGCCCTATCTTTCGGCGAAG+AGG 0.552003 3.3:-41593357 MS.gene30580:CDS
AAAGATGGGGTATGAGGAGG+AGG 0.552057 3.3:-41593102 MS.gene30580:CDS
GCAAGCTGAGGAAGAAGTCA+AGG 0.554296 3.3:-41586651 MS.gene30580:CDS
CTCCTTCTCTCCGAAAGATA+GGG 0.554373 3.3:+41584988 None:intergenic
AGTGACTTCAAAGAAGCAAA+AGG 0.555602 3.3:-41591182 MS.gene30580:CDS
AAACTTTGAGTATCCACGTC+AGG 0.555864 3.3:+41593504 None:intergenic
AGGGAGTGCACCCACAAAGA+AGG 0.555904 3.3:-41582007 MS.gene30580:CDS
TCCTGTGAAGTCTGGAGCGG+AGG 0.556366 3.3:-41585261 MS.gene30580:intron
TCCTGTGAAGTCTGGAGCGG+AGG 0.556366 3.3:-41589134 MS.gene30580:intron
AACTCAGCTGAAAGTGGCGG+AGG 0.557051 3.3:-41590471 MS.gene30580:CDS
GCAAGCTGAGGAAGAAGTCA+GGG 0.557791 3.3:-41591206 MS.gene30580:CDS
GCAAGCCGAGGAAGAAGTCG+AGG 0.557827 3.3:-41582493 MS.gene30580:CDS
CACATCCTCAAATTCATGAA+AGG 0.558714 3.3:+41582383 None:intergenic
AGAACTATCAGCTTTCTTTG+CGG 0.559186 3.3:+41592468 None:intergenic
CGTTTCTTAAGACCACATCC+GGG 0.561543 3.3:+41589077 None:intergenic
GGCGGAGGAGGCTTTGTCAG+GGG 0.562222 3.3:-41590456 MS.gene30580:CDS
TGAAGAGCAATAATATTGAT+GGG 0.562579 3.3:-41584617 MS.gene30580:CDS
TGTTGAGTTTGCAACTGCAA+AGG 0.563504 3.3:-41581173 MS.gene30580:CDS
CTACAAGAGTCGAGCCTGAA+GGG 0.564320 3.3:-41579356 MS.gene30580:CDS
AAGAAATGTGTCCCCGGATG+TGG 0.566003 3.3:-41589089 MS.gene30580:CDS
GATCGCCAAGACGCTATCCT+CGG 0.566309 3.3:-41585080 MS.gene30580:CDS
GATCGCCAAGACGCTATCCT+CGG 0.566309 3.3:-41588953 MS.gene30580:CDS
TCTACAACGATGGTGTCCCC+GGG 0.568555 3.3:-41593588 None:intergenic
AGGAGTGGCTTCTAAACTTG+TGG 0.569237 3.3:-41588843 MS.gene30580:CDS
TTAAGCGTCTCCCTCTGCAA+TGG 0.569507 3.3:+41579476 None:intergenic
TGGCGGAGGAGGCTTTGTCA+GGG 0.569871 3.3:-41590457 MS.gene30580:CDS
AGGATATGGACGCCACTCCC+GGG 0.570814 3.3:+41590611 None:intergenic
AAACTTTCAAGATCCACGTC+AGG 0.572396 3.3:+41585137 None:intergenic
AAACTTTCAAGATCCACGTC+AGG 0.572396 3.3:+41589010 None:intergenic
ATCATGACGAAGAAGTTCGA+GGG 0.572521 3.3:-41588447 MS.gene30580:CDS
GAAAGATAGGGCTAACGAAG+AGG 0.574233 3.3:+41593367 None:intergenic
CGAAAAGATGGGGTATGAGA+AGG 0.577206 3.3:-41588517 MS.gene30580:CDS
CTTGATTTAGCTCGGGAGAG+GGG 0.578698 3.3:-41580979 MS.gene30580:CDS
ATCATGACGAAGAAGCTCAA+GGG 0.579195 3.3:-41593032 MS.gene30580:CDS
ATCATGACGAAGAAGCTCGA+GGG 0.582010 3.3:-41584576 MS.gene30580:CDS
GAAGAGTAATCCATCAGAGT+TGG 0.583113 3.3:+41584671 None:intergenic
GAAGAGTAATCCATCAGAGT+TGG 0.583113 3.3:+41588542 None:intergenic
TGTAATACCTTCACCTCATG+AGG 0.584681 3.3:+41592677 None:intergenic
CGCCTCTTACGACCACACCC+GGG 0.585357 3.3:+41593571 None:intergenic
GAGAACTGACCCTCGGCCAA+GGG 0.585674 3.3:-41579508 MS.gene30580:CDS
GAAGAGTAATGTGTCAGTGT+TGG 0.586273 3.3:+41593130 None:intergenic
CATCATGACGAAGAAGCTCA+AGG 0.590035 3.3:-41593033 MS.gene30580:CDS
TACTCTTCTTCGAAAAGATG+GGG 0.590062 3.3:-41588527 MS.gene30580:CDS
GCAGTTGTGGTGGTCCAGGT+AGG 0.591225 3.3:+41579383 None:intergenic
TTCTCCTGTGAAGTCTGGAG+CGG 0.591347 3.3:-41585264 MS.gene30580:intron
TTCTCCTGTGAAGTCTGGAG+CGG 0.591347 3.3:-41589137 MS.gene30580:intron
CATCATGACGAAGAAGTTCG+AGG 0.591689 3.3:-41588448 MS.gene30580:CDS
TGACGAGCAATAATATTGAT+GGG 0.592000 3.3:-41593076 MS.gene30580:CDS
CGTAACCGAGGATAGCGTCT+TGG 0.592411 3.3:+41585075 None:intergenic
CGTAACCGAGGATAGCGTCT+TGG 0.592411 3.3:+41588948 None:intergenic
GTTGCAGCGGATGATCTCCT+AGG 0.593344 3.3:-41593459 MS.gene30580:CDS
GAAGCAAAAGGTAGATGATG+AGG 0.593633 3.3:-41582457 MS.gene30580:CDS
GAAGCAAAAGGTAGATGATG+AGG 0.593633 3.3:-41586615 MS.gene30580:CDS
AAAGATAGGGTTAACGAAGA+GGG 0.593851 3.3:+41588874 None:intergenic
GTTGTTGAACCGAAGAGTAA+TGG 0.596929 3.3:-41585041 MS.gene30580:CDS
GTTGTTGAACCGAAGAGTAA+TGG 0.596929 3.3:-41588914 MS.gene30580:CDS
TACTCTTCTTCGAAAAGATG+GGG 0.597094 3.3:-41593115 MS.gene30580:CDS
TGTCCGACTTCAAGAAGCCC+GGG 0.597660 3.3:-41590628 MS.gene30580:CDS
TGTCCTGAACGAGCCTCATG+AGG 0.598633 3.3:-41592690 MS.gene30580:CDS
GAACGAGCCTCATGAGGTGA+AGG 0.600308 3.3:-41592684 MS.gene30580:CDS
AAAGATAGGGTTAACGAAGA+GGG 0.602204 3.3:+41585001 None:intergenic
GAAAGATAGGGTTAACGAAG+AGG 0.603099 3.3:+41588873 None:intergenic
AAAGAAGCAAAAGGTAGATG+AGG 0.604240 3.3:-41591173 MS.gene30580:CDS
TTGTAGGATCGCAGTTGTGG+TGG 0.605080 3.3:+41579373 None:intergenic
AGTAACAACTCAGCTGAAAG+TGG 0.605182 3.3:-41590477 MS.gene30580:CDS
CCTACAAGAGTCGAGCCTGA+AGG 0.608410 3.3:-41579357 MS.gene30580:CDS
ACTCCCGGGCTTCTTGAAGT+CGG 0.608851 3.3:+41590625 None:intergenic
ATGCATTATGCGGAGACCGA+AGG 0.609027 3.3:-41584546 MS.gene30580:intron
ATGCATTATGCGGAGACCGA+AGG 0.609027 3.3:-41588417 MS.gene30580:intron
GGAATCTTCTGATGAAGATG+AGG 0.612032 3.3:-41582177 MS.gene30580:intron
TTATGCAAGAAATGTGTCCC+CGG 0.612072 3.3:-41589095 MS.gene30580:CDS
GGATTATCTCTTACCTGACG+TGG 0.613896 3.3:-41585150 MS.gene30580:CDS
GGATTATCTCTTACCTGACG+TGG 0.613896 3.3:-41589023 MS.gene30580:CDS
AAAGATAGGGCTAACGAAGA+GGG 0.618715 3.3:+41593368 None:intergenic
TTGACTTTGATATAGGCAAG+AGG 0.619505 3.3:-41582515 MS.gene30580:intron
TTGACTTTGATATAGGCAAG+AGG 0.619505 3.3:-41591228 MS.gene30580:intron
GAAAGATAGGGTTAACGAAG+AGG 0.620492 3.3:+41585000 None:intergenic
GCCTCTTACGACCACACCCG+GGG 0.624177 3.3:+41593572 None:intergenic
GGAATCTTCTGATGAAGATG+AGG 0.626607 3.3:-41589534 MS.gene30580:intron
TGAATCTTCTGATGAAGATG+AGG 0.627880 3.3:-41585496 MS.gene30580:intron
TGAATCTTCTGATGAAGATG+AGG 0.627880 3.3:-41592431 MS.gene30580:intron
GATGGGGTATGAGAAGGAGG+CGG 0.628374 3.3:-41584640 MS.gene30580:CDS
GATGGGGTATGAGAAGGAGG+CGG 0.628374 3.3:-41588511 MS.gene30580:CDS
GAATAATGATCCATTGCAGA+GGG 0.629133 3.3:-41579486 MS.gene30580:CDS
CGAAAAGATGGGGTATGAGG+AGG 0.630413 3.3:-41593105 MS.gene30580:CDS
TCATGACGAAGAAGCTCAAG+GGG 0.631475 3.3:-41593031 MS.gene30580:CDS
AAAGATGGGGTATGAGAAGG+AGG 0.631960 3.3:-41588514 MS.gene30580:CDS
AGTAGTCAAAATTAGTTCGG+AGG 0.632406 3.3:-41582409 MS.gene30580:CDS
GGGGAAGCAAATGCATTATG+CGG 0.636737 3.3:-41588427 MS.gene30580:CDS
GGGGAAGCGGATGCATTCTG+CGG 0.637438 3.3:-41593012 MS.gene30580:CDS
AAAGATGGGGTATGAGAAGG+AGG 0.637866 3.3:-41584643 MS.gene30580:CDS
GGTCTGTCCTGATGAAGATG+AGG 0.638915 3.3:-41592648 MS.gene30580:intron
AAGATATGTATCCCCGAATG+TGG 0.640323 3.3:-41585216 MS.gene30580:CDS
AAGTTGTTGCACCTAAAAGT+GGG 0.641757 3.3:-41582247 MS.gene30580:CDS
TGTTGAGTTTGAAACTGCAG+AGG 0.644896 3.3:-41590827 MS.gene30580:CDS
CATCATGACGAAGAAGCTCG+AGG 0.646448 3.3:-41584577 MS.gene30580:CDS
AAAGCAAGAGAACTGACCCT+CGG 0.647549 3.3:-41579515 MS.gene30580:CDS
TGTAACCGAAGATAATGCCT+AGG 0.649259 3.3:+41593442 None:intergenic
TAAGATTCTTCAAGTTGCAG+CGG 0.651338 3.3:-41593472 MS.gene30580:CDS
TCATGACGAAGAAGCTCGAG+GGG 0.655307 3.3:-41584575 MS.gene30580:CDS
TGTCAGTGTTGGTCTTCGGG+AGG 0.655386 3.3:+41593141 None:intergenic
GGGGAAGCAGATGCATTATG+CGG 0.657065 3.3:-41584556 MS.gene30580:CDS
TATCTTTCGAAGAGAAGGAG+TGG 0.657847 3.3:-41588858 MS.gene30580:CDS
ATGCATTCTGCGGAGAACGA+AGG 0.657924 3.3:-41593002 MS.gene30580:intron
GGAATAATGATCCATTGCAG+AGG 0.667976 3.3:-41579487 MS.gene30580:CDS
GGTCCAGGTAGGCTGATGAG+GGG 0.671239 3.3:+41579394 None:intergenic
GAACCGAAGAGTAATGGTTG+TGG 0.671387 3.3:-41585035 MS.gene30580:CDS
GAACCGAAGAGTAATGGTTG+TGG 0.671387 3.3:-41588908 MS.gene30580:CDS
GAGTGCACCTGAAAAGAAAG+CGG 0.672655 3.3:-41589582 MS.gene30580:CDS
AACAACTCAGCTGAAAGTGG+CGG 0.672747 3.3:-41590474 MS.gene30580:CDS
AGATATGGATCCATGCACAA+AGG 0.678388 3.3:-41579451 MS.gene30580:CDS
TCAACATGTGCATAGCCTAG+TGG 0.679336 3.3:+41590844 None:intergenic
TCTCCCGAGCTAAATCAAGT+CGG 0.679997 3.3:+41580983 None:intergenic
ATAGGCACTTGATAAGAATG+GGG 0.680446 3.3:-41590670 MS.gene30580:intron
TATAGGCAAGAGGCAAGCCG+AGG 0.681134 3.3:-41582505 MS.gene30580:intron
TATAGGCAAGAGGCAAGCTG+AGG 0.681134 3.3:-41591218 MS.gene30580:intron
GAATGATGTCTTTCCTGACG+TGG 0.685326 3.3:-41593517 MS.gene30580:CDS
CATCAAAGATGACGTAACCG+AGG 0.686654 3.3:+41585063 None:intergenic
CATCAAAGATGACGTAACCG+AGG 0.686654 3.3:+41588936 None:intergenic
GTTTCTTAAGACCACATCCG+GGG 0.688273 3.3:+41589078 None:intergenic
TCATGACGAAGAAGTTCGAG+GGG 0.691102 3.3:-41588446 MS.gene30580:CDS
GTTTCTTAAGACCACATTCG+GGG 0.691279 3.3:+41585205 None:intergenic
GAGTGCACCTGAAAAGAAAG+CGG 0.705679 3.3:-41582225 MS.gene30580:CDS
TATAGGCAAGAAGCAAGCTG+AGG 0.718184 3.3:-41586663 MS.gene30580:intron
TAAGATTCTTCAAGTCATCG+CGG 0.762237 3.3:-41585105 MS.gene30580:CDS
TAAGATTCTTCAAGTCATCG+CGG 0.762237 3.3:-41588978 MS.gene30580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.3 gene 41579346 41593601 41579346 ID=MS.gene30580
chr3.3 mRNA 41579346 41593601 41579346 ID=MS.gene30580.t1;Parent=MS.gene30580
chr3.3 exon 41593311 41593601 41593311 ID=MS.gene30580.t1.exon1;Parent=MS.gene30580.t1
chr3.3 CDS 41593311 41593601 41593311 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41593003 41593189 41593003 ID=MS.gene30580.t1.exon2;Parent=MS.gene30580.t1
chr3.3 CDS 41593003 41593189 41593003 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41592649 41592716 41592649 ID=MS.gene30580.t1.exon3;Parent=MS.gene30580.t1
chr3.3 CDS 41592649 41592716 41592649 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41592432 41592533 41592432 ID=MS.gene30580.t1.exon4;Parent=MS.gene30580.t1
chr3.3 CDS 41592432 41592533 41592432 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41592092 41592113 41592092 ID=MS.gene30580.t1.exon5;Parent=MS.gene30580.t1
chr3.3 CDS 41592092 41592113 41592092 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41591156 41591235 41591156 ID=MS.gene30580.t1.exon6;Parent=MS.gene30580.t1
chr3.3 CDS 41591156 41591235 41591156 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41590980 41591055 41590980 ID=MS.gene30580.t1.exon7;Parent=MS.gene30580.t1
chr3.3 CDS 41590980 41591055 41590980 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41590816 41590916 41590816 ID=MS.gene30580.t1.exon8;Parent=MS.gene30580.t1
chr3.3 CDS 41590816 41590916 41590816 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41590597 41590688 41590597 ID=MS.gene30580.t1.exon9;Parent=MS.gene30580.t1
chr3.3 CDS 41590597 41590688 41590597 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41590428 41590497 41590428 ID=MS.gene30580.t1.exon10;Parent=MS.gene30580.t1
chr3.3 CDS 41590428 41590497 41590428 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41589535 41589639 41589535 ID=MS.gene30580.t1.exon11;Parent=MS.gene30580.t1
chr3.3 CDS 41589535 41589639 41589535 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41588814 41589146 41588814 ID=MS.gene30580.t1.exon12;Parent=MS.gene30580.t1
chr3.3 CDS 41588814 41589146 41588814 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41588418 41588601 41588418 ID=MS.gene30580.t1.exon13;Parent=MS.gene30580.t1
chr3.3 CDS 41588418 41588601 41588418 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41586598 41586680 41586598 ID=MS.gene30580.t1.exon14;Parent=MS.gene30580.t1
chr3.3 CDS 41586598 41586680 41586598 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41585497 41585598 41585497 ID=MS.gene30580.t1.exon15;Parent=MS.gene30580.t1
chr3.3 CDS 41585497 41585598 41585497 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41584941 41585273 41584941 ID=MS.gene30580.t1.exon16;Parent=MS.gene30580.t1
chr3.3 CDS 41584941 41585273 41584941 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41584547 41584730 41584547 ID=MS.gene30580.t1.exon17;Parent=MS.gene30580.t1
chr3.3 CDS 41584547 41584730 41584547 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41582383 41582522 41582383 ID=MS.gene30580.t1.exon18;Parent=MS.gene30580.t1
chr3.3 CDS 41582383 41582522 41582383 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41582178 41582282 41582178 ID=MS.gene30580.t1.exon19;Parent=MS.gene30580.t1
chr3.3 CDS 41582178 41582282 41582178 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41581960 41582061 41581960 ID=MS.gene30580.t1.exon20;Parent=MS.gene30580.t1
chr3.3 CDS 41581960 41582061 41581960 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41581357 41581445 41581357 ID=MS.gene30580.t1.exon21;Parent=MS.gene30580.t1
chr3.3 CDS 41581357 41581445 41581357 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41581162 41581279 41581162 ID=MS.gene30580.t1.exon22;Parent=MS.gene30580.t1
chr3.3 CDS 41581162 41581279 41581162 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41580955 41581046 41580955 ID=MS.gene30580.t1.exon23;Parent=MS.gene30580.t1
chr3.3 CDS 41580955 41581046 41580955 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
chr3.3 exon 41579346 41579544 41579346 ID=MS.gene30580.t1.exon24;Parent=MS.gene30580.t1
chr3.3 CDS 41579346 41579544 41579346 ID=cds.MS.gene30580.t1;Parent=MS.gene30580.t1
Gene Sequence

>MS.gene30580

ATGGTGTCCCCGGGTGTGGTCGTAAGAGGCGCAACACCTGTTGACCTATATAAGATTCTGGTGAATGATGTCTTTCCTGACGTGGATACTCAAAGTTTGGTGAATGGTAAGATTCTTCAAGTTGCAGCGGATGATCTCCTAGGCATTATCTTCGGTTACATCGTCTTTGATGTTGGTGAACTGAAGCGTACTAGTTATGGTCATATCACTTCCCTCTTCGTTAGCCCTATCTTTCGGCGAAGAGGACACGCTACTAGACTTGCGACCATGACTGAAAAGGCCTTGGAAAAGGTTTTGTATGTTTGGATTAGTTTGTCAAGTTAGAAGTCTGTTATTGATATTGTTAGTGTGTCTTCTTTTAATGGCACGATTGGTGTAGTCTTTAATATGGTTACTGTACCTGTGTTTGTAGCAAGGTGCTGCTCACGTCTCAGTGCTCCTCCCGAAGACCAACACTGACACATTACTCTTCTTCGAAAAGATGGGGTATGAGGAGGAGGCGGTGACGAGCAATAATATTGATGGGAATGATGATGATGCTAATGTCATCATGACGAAGAAGCTCAAGGGGAAGCGGATGCATTCTGCGGAGAACGAAGGTAATCCAAAAGGCACTTGATTGTTAGGGCGATTTTCCCCCCCTTTTTTGCTGTTTATTTTTTGAATTTTGCTGTGAAAACAATTGCAACTTTATTGGCCTGTTTTTTTTTTTTTTTTGACAAGATGGTAATGTGTCTCTTTACAATCTGAATTTTTACTATGTTTTGAATGCATAATGAAACTCTATTTTAAGGAAATACTAATGATGTGAGTGAAAGGTTATAATCATTGGTAAGTGTGTGATTCTATTCATGATATTAAAGTTTGGTGCTTATTACATCTTAGGGTCTGTCCTGAACGAGCCTCATGAGGTGAAGGTATTACATCTTAGGGTCTGTCCTGATGAAGATGAGGTATTAGACATTTTGAAGTTTATTGCATGCTGATAGCACCCTTAATTTTATGTCATTGTATTTACTGGTTTTTAAAATGCCCTTTTTAATTAAACATTTTTGTTTTATGGTTTAGAAACCTGCAGTAGAAGCTGTTCCTTCTAAAATAGGGAATGCACCCGCAAAGAAAGCTGATAGTTCTGATGAAGAATCTGATGAATCTTCTGATGAAGATGAGGTGAGAGTTTAAACCTTTCATAGCAGCCATTGAAATAGTTGTAACCTTCTAACTATTAGTTGGTGTTTTGTGATACCTCTAATGGTTGTATGATTTGACAATAACAATAATATGTAATTGTCGCTTCTATGGTACCTTTCGTATTATGAGATAACAATCTGAGAGAATTTGAGAGAGAAAATGAAAGTAAAAGGAGAAAATATCCATTGAATGATGATTGTGCCTACAATATGTATATATAGAAGTTCTCATCTAACTGACTATGAGATAGCTTCTGATACAAGTAACGATCACTCTAACAAACTTCCTACAAAATAGGAGATGCATAACTGTCATCAAAGTAATTACAGCTGCAGTCAAACTAATCTAACTAGAGATTAAGGTAACTAATTAACAACTATTAGTGTGCTAAGTGTCTTCAATAGCTTTATCTTGGTTATGTAATATTTTGACTATAATGTTTTTGGTTTGTTTGTAGGTTGATGTTGCTCCTGTTGTTGTTTCTCCTCTGAAGTCTGGAATGAATGGTACAATCTTTACTGTTTTGCTTTGATTTTTCGTTTAAAGATTATATTTTTACTTTGAACCAACAAACGTAAATCAAAAGGGTCTAGCAACAACTTAAGCAAAGATCACTCTACCTCTAGCATTCATAAACTAATCACCCTTAAAGCATTCTTCTTAGTCTGTACGAATACATTTCCCATACAAGCTTTAAACATCACTAACTTGAACTTCTTAGATCATCTACTTTGCATTCCTTTTCTCTCATCCTAAATGTCTCGACACTAAAATTCTTATAGCAAATAATCCCTTAGCTAGACAATATAATATTATCAAATTTAGAACTCTATTAAAGACCTCTTAGAACTACCATTAAATATGAAGATTATGTATTTATGTATGCACAATCAGTTTTTTTACACTGAGCTTGGTTGGTTTTAATTGATCGGTGTGATTTGAAATTAATGAGAGAATTAAATCTTAGTTTTAGTTTTAATTTAAAGTGATATAATATCTGTGGAAAGTTGTTCTCCCCCAATTTTATTTGATGTTCCGAAGTTGATTAATATGTGCTATGGTTATATATAGAGTTGTTGATTGGTCGAATTGATTTTATGGAAAGTGCAATTTTTTTCTCTGATTTTTTTTATGTTCCTATTTTTGTTTATTGGGTTATTTTGACTTTGATATAGGCAAGAGGCAAGCTGAGGAAGAAGTCAGGGCAGTGACTTCAAAGAAGCAAAAGGTAGATGAGGTTGCTGCCAAACAAAAGGTATTGAAGTTATTTCAATGTGTAGATCCTGTATTTGTTTGTTATTGTAATGGTATTGACTTATGTCATGTTATTGACATGTACTTATTGACTTTCGAAGACAATATATGTTGGGAACTTATCCTTCAAGGCGCAAGAATCTGACATGTACTTATTTTTCTCACTCGTGATTCTTGGTTATTTTATTTTCTATATTTTTTATCTAACTTAGAAATTATTCAGAATAAATTTTTTCCAAGATTGTGGAATGGTTGCTGATGTATGTCTTGGTTATGGTAAGAGAAAAAGGCCACTAGGCTATGCACATGTTGAGTTTGAAACTGCAGAGGAAGCCAAACGCGTAAGCTCTCGACATCTTTTCAACTTTATGGATTTGATGAAAAATGTTATTGATTGTTTCCATGGCACTTGTTTCTGGATTCACCTGTTTCACATGATTATATGATTGTTTGCATTTTTAATAATAGGCACTTGATAAGAATGGGGAAAAACTGTTGGATCGTGATGTCCGACTTCAAGAAGCCCGGGAGTGGCGTCCATATCCTCTTTTTATTGGCAGGTAATTACTATACAAGAAATTTTCTTTTAATTACATTTATGCCTCATTTGTATTGATTCCATTATTCCTTACATTTAAGCCTTTTTAATATTGTTGCAGTAACAACTCAGCTGAAAGTGGCGGAGGAGGCTTTGTCAGGGGTTTTGGTAAGAGTAATGGAGAGGATGAGGTGATTTTATTATCCCCTTTCAGCTCATGCACAATGATTATGATTTTATTCTCCCCAGTTATTCTTTTATATATTGTTATCATCAAAACCTTAGAAACATTGTTCTAAAATTCTATTTGGTTCAACATTTTTTCCCTTTTTGATGATGACAAACTAACGTATTTTTAAGAACTATTGTCTTTAGTAATTAACTTAACTCATTAGAGGGTGTCGTTTGCAAGCTCCCCCTAAATCTAAGGCGGTTAAATAAAACATTATAATCATATAGACATTTATATGAGCAGTTAGAAGCTATTATATAAGTAAGCTATTATAAGTAGTCAGAAGCAGTTAAATTCAGATTCTGTGGAATAAAATTATCAGCTGAGAATTAAATTACTACTTATTCTGCAGAATATTCCTTCTGATAAGAATTTTAATTCTGAAGTTCTTCTTAGGGGCAAACATCATTCTTGAATAAAATGCATGTTCAAATTTTTCTTAATGAAGCATTCATGTGTTCTTGGCAAAGAGAATTTAAGAATTGGCTTACCACACTAACTGCAAAGGAAATGTCTAGACGAGAGTAACTGTGAGATAATACAATTTTCCAACCAATCTCCTATATCTTCCTGAATTTGATAGAGGCTCCCCCTGATTAGGTAGAAATTTGACATTTGGAAATCCATAGGAGTATCAACTGGCTTGAAGTTTATTGCATGATGATAATACCCTTAATTTTATATCATTGTATTTAATGGTTTTTTAAGATGCCCGTTTTAATTAAACATTTTTCTGTCATGGTTTAGAACCCTGAAGCAGAAGCTGTTTCTTCTAAAATAGGGAGTGCACCTGAAAAGAAAGCGGATATTCATTTTGTTTCATCTAGTGAGGAATCTTCTGATGAAGATGAGGTATTAGACATTTTGAAGTTTATTGCATCATGATAGTACCCTTTATTTTATATCATTGTAATTGCTGGTTTTTTAAAATGCCCTTTTTAATTAAACATTTTTGTTTCATGGTTTAGAAACTTGAAGAAAAAGTTGTTCCTTCTAAAATAGGGAGTGCAGCTGCCGAAATAGTTGTAACCTTTCATAGCAGCCATAGAAATAGTTGTAACTTTCTAACTATTAGTTGGTGTTTTGTGCTACCTCTAATGGTTGTATGATTTGACTCCATATATATCACAATAACCATAATAGCAATAATATGTAGTTATCGCTTCTATGCTACCTTTCAACTATTATGTTTTTGGTTTTTTTGTGGGTTGTTGCTGCTCTTGTTGTTTCTCCTGTGAAGTCTGGAGCGGAGGAGTCACCCAAAATTCGTTATGCAAGAAATGTGTCCCCGGATGTGGTCTTAAGAAACGCAACATCTGACGACATATTTAAGATTCTCGTGGATTATCTCTTACCTGACGTGGATCTTGAAAGTTTGGAGAATGGTAAGATTCTTCAAGTCATCGCGGATGATCGCCAAGACGCTATCCTCGGTTACGTCATCTTTGATGTTGTTGAACCGAAGAGTAATGGTTGTGGTCATATCACTTCCCTCTTCGTTAACCCTATCTTTCGAAGAGAAGGAGTGGCTTCTAAACTTGTGGAAAGCGCTGAAAAGGACTTAAGGGATAAGGTTGGTTTGTTTTTTACCGATTGATTCTGTCATAATTTTGTTGGTTTGGATTTGTTAGTTAAGTTAAAATCCTGTTATTTCTATTGTTAGTTAGTTAAAATCATATATGTTAGGAAGAGTTAGATTGAGTATAATTAACAAGTGTGTCTTCTTTTAATTTAATGGTGTGATTGGTGTAGTCTGTAATATGGTTCCTGTTACTGTGTTAGTAGCAAGGTGCTGCTTACGTCTCAGTGCCCGTCCCGAAGACCAACTCTGATGGATTACTCTTCTTCGAAAAGATGGGGTATGAGAAGGAGGCGGTGAAGAGCAATTATATTGATGGGAAGGATGATGCTAATGTCATCATGACGAAGAAGTTCGAGGGGAAGCAAATGCATTATGCGGAGACCGAAGGTAATGCAAAAGGCACTTGATTGTTAGAACGCTTTGCCCTCTTTTTTGTTGTGAAAACAATTCCAACTTTACTGGCTAGTTTGGTTAATGACGCGAGTGAAAAGTTTTCTATAGTTGATGCAGTCATTCTATTTATCAGATAGGTTGCTATATGAAAAACATGATCCCAAAAAGACAAGCATTTTAGCATGAGCAAGCAAGGTCAAATCAGTTTCAACAATGTGCCTATGCATTTTTTCAACTGGTCCATTTTTATGATTTGTGTGAGGTGTGATACCTTGATCATTAAGAAATTTGGTAGAGGGACACAATTCACCACCATCAGATTGGACAACTTTAATTTTATGATTTTGAAGTTTCGAAATGTAGACAGAGTATGAGATTTTAGTTTTAAAGGATAAATCCAAGTAAAACGTGAAAAGGCATCAACAATAGTAAAAAATAATAGGAATAACCACATGGCAATTGAATAGGTGCAGGCCCTGAAAAATCACATAAAACAAGTTCGAGGGGTTTAGTATAGACAGTAGTGGAGTCGGATGAGGGTAACCTATGGGTTTTACCAAGACAACATTAAGAGCGAAAATCAGACAAGCTTTTATTTGGAAAAGAAACATTACTTAGTTTCAAAGCATTTTTGAGTACGTCATAATGAGGATAGCCAAGTCTACGATTGCCATATGCTATACAAAGGTAAACAAGAGTTGTTTGTAGGGACAATTGTTGAACAAGCAACATTATTACATTGATAGGTACGAAACTGTAAACTAGAAAACGGGCACTATGACAGGATATTCGCCCGCCTAAGCCCTCTGCAGCAACAAAACAAAACTGATGCTGCTATATGCGTGCTGACAGCAATCAAAATGCAGCTGTAGACACCGCATACCTCAGCCTCTCTAAGCAAACAACAAACAAAACACTAACGCGACAAACACTCCTTCCTTTGGATTCCAATGCCATTCATAGAACAGACAAGCTGGAGAATTTGATCAATTCAAACGCCATCTCCACGAGAAAATCTTTATCTCCTCCACTAGCACTTCCACTTCTCCAATTTTATTGTTGAAAATTCTATCATTCCTAGCTTGCCAAATACTCACCGCATGCCAAATCATCCGAAAACCGTTATGAATCTTTTTGTTGCCCGAGGCACCGTCCCAACTCTCCCATAACAGGAACAGATTTGGTGGAATAAAAAAAATCATTCCCACCCATCTCATAACACTATCCCACACCTTCATGGCAAACTCACAATGGAGGAACACATGGTTAGCCAATTCCTCCTCCCCTTCACACATCACACAATCTAAAGAGGTTTCCGGTAATAGGACTTGTCTTAATGAAAGATTAGTCTTGGTGGGAATCCGATTATGAAGGAGTTTTCAAGAGAACGACGCGACTTTAGAAGGAGCCACACTCTTCCAAATCCTGAAGAATACCCGCAATACTTGTATTACTAATAGAGTTGTTTAATGATAGTCTTTTTACTTTGTTTTTGTTGAATTTTATTAGTTCTGATTCATGGGTTTTGAGTGTTGATTAGTTTTGTCCATCGAGATACACACATAAAATTTAGTGTGTAGTTTTTCAAATGGGTTTTCAAATATGCTATGTTATAGAGTTGTTGATTGGTCGAACTAATTATATGGAAAGTGAAATTTTTTTCTGATATTTTTTTTTTTTATGTTCTGATGTTGATTTTTTTTTTATTGGGTTATTTTGACTTTGATATAGGCAAGAAGCAAGCTGAGGAAGAAGTCAAGGAAGTGACTTCAAAGAAGCAAAAGGTAGATGATGAGGTTGCTGCTAAACAAAAGGTATTGAAAGTAGTCAAAATTAGTTCGGAGGAATCCTTTCACGAATCTAAGGATGTGGTATTATATTTTAATGTATATATATGTTATGAATTTAATGTGGTAGATCCTGTATTCGTTTGTGTTGGATATAGAAAGGTTTAACGTGGAAAAGAATATGTTATGTGAACAGCATGAAAGGGATATTTTTATTGAATGATAACCATCATATTTATACATATAGAAAAGCTTAAAATAATGCATAAAGAAACTACTATTTGAAAACTAAATGCCTAAAAAATTGGTAACAAATAGAGCATATCAGAGAGTTCCTAACAATAACATAAAAAGATAATAGATCCTAAAAATTAGGAACTTAAAACAGTAGTTTCATAGTCATCCAGCCAACAGTTTGTTATTGTAATGTTATTGACTTATGTCATGTTATTGATTGATACATTGTATTTTTCATTGTATTCCAAACTCAAATCGATGAAATTCCCCATTTTAATTTTGAGGGGAACTATTACAGTATAGTGAGAATAAACTAGAGTTAGATGACAGGAAAACTAGAGTTAGACCAACTAACCCTTGTAAATACTCTCCATTTGTTTATGTAGTCAAAAACAGTTAAATTCAGATTCTGTAGAATAGACAATTATTAGCTGAGAATTAAATTACTACCTAATACCTATTATGCAGAATGATCCTTCTGATTAGAATTTTGATTTTTGAAGTTCTACTCTGGGGAAAACATCATTCTTGAAAAAAATGTATTTTCAATTTTTTCTTAATGAAGCATTCATGTGTTCTTGGAAAAGAAAATTTAAGAATTGACTTACCACACTAACTGCAAAGGAAATGTAATGAGAGTAACTGTGAAAGTTTGACATTTGGATCTTGAGGAGTATCAACTGGCTTGAAGTTTATTGCATGATGATAATACCCTTAATTTTCTATCATTCTATTTACTGGTTTTTTAAGATGCCCGTTTTAATTAAACATTTTTCTGTCATGGTTTAGAACCCTGAAGCAGAAGCTGTTCCTTCTAAAATAGGGAGTGCACCCGCAAACAAAGCTGATAGTTCTGATGAAGAATCTGATGAATCTTCTGATGAAGATGAGGTGATAGTTTAAACCTTTCATAGCAGCCATATAATAGTTGTAACCTTCTAACTATTAGTTGGTGTTTTGTGATACCTCTAACGGTTGTATGATTTGACTCCATATATACCACAATAACCATAATAACAATAATATGTAGTTGTCGCTTCTATGCTACCTTTTTACTATAATGTTTTTGGTTTTTTTGTGGGTTGTTGCTGCTCTTGTTGTTTCTCCTGTGAAGTCTGGAGCGGAGGAGTCACCCAAAATTCGTTATGCAAGATATGTATCCCCGAATGTGGTCTTAAGAAACGCAACATCTGACGACATATTTAAGATTCTCGTGGATTATCTCTTACCTGACGTGGATCTTGAAAGTTTGGAGAATGGTAAGATTCTTCAAGTCATCGCGGATGATCGCCAAGACGCTATCCTCGGTTACGTCATCTTTGATGTTGTTGAACCGAAGAGTAATGGTTGTGGTCATATCACTTCCCTCTTCGTTAACCCTATCTTTCGGAGAGAAGGAGTCGCTTCTAAACTTGTGGAAAGCGCTGAAAAGGACTTAAGGGATAAGGTTTGTTTGTTTTTTACCGATTGATTCTGTCATAATTTTGTTGGTTTGGATTTGTTAGTTAAGTTAAAAGTCTGTTATTGCTATTGTTAGTTAGTTAAAATCATATATGTTAGGAGGAGTTAGATTGAGTATAATTAACAAGTGTGTCTTCTTTTAATTTAATGGTGTGATTGGTGGTATGTAATATGGTTCCTGTTACTGTGTTAGTAGCAAGGTGCTGTTTACGTCTCAGTGCCAGTCCCGAAGACCAACTCTGATGGATTACTCTTCTTCAAAAAGATGGGGTATGAGAAGGAGGCGGTGAAGAGCAATAATATTGATGGGAAGGATGATGCTAATGTCATCATGACGAAGAAGCTCGAGGGGAAGCAGATGCATTATGCGGAGACCGAAGGTAATGCAAAAGGCACTTGATTGTTAGAACGATTTGCCCCCTTTTTTAGCTGTTTCTTTTCTTGAATTTTGTTGTGAAAACAATTGCAACTTTATTGGCGGTTTGATTAATGACACGAGTGAAAAGTTTTCTAGAGTTGAGGCAGTCATTCTATTTATCAGATAGGTTGCTCTAAGAACTTTACATTATTTAGTTATAACTTGAGTCTATAATAACACGTCTCTAATACAAACAGTCTAAGCATACCTATTCTAATATAATCTGTTTTGATTCTTGGGTTTTAACTTTCAAATGTTGATTAATCTTTTTAGTTCATAGAGAAATACATATGATTTTGTATTGACTTTTTTAATTTACTTTTGAAACTTGGTTTTTTATTTGTGAAGTTAAGTACTAATTGTATTTTTTCGGAATCAGCAAATTTTATTAACAACGAGTGTGTACAAGACACACAGCAAACTCGAGGGCAGAAAAATGATACAAAAGTCCCCGACATATCGGAAAACTCAACTACTGTAAACCCCTCTTTCCAAACAGAAAACTGGCCCTATGATAGGAAATTCCCCCGCCTAAGCCTTCTGCAGAAGCAAAACAAAACTGATGCTGCTATATGCGTGCTGACAGCAACCAAAATGCCCGCCTAAGCCTTCTGCAGAAGCAAAACAAAACTGATGCTGCTATATGCGTGCTGACAGCAACCAAAATGCCGCATACCTCAGCCTCTCCAAGCAAACAACAGACATAACAGTAACGCAATAAACACTTCTTAGTCTTAGAAATCGTTGTTAGGCCTAAAACAACCCCACAAAACCGGCTTGTGAGGTGAGGATTGCCCCCACTTATAAACACATTGTCAGGTCATCACCTATCCAATGTGGGACTCTTAACACACCCCTTCACGACCAGCACTATTGGACTTGGTTAGTGGACATAAATGGTGAGTGGTCCGATAGCGGAAACCTGATAACATGTGGCCCAATGGATCTTGGAGAGGCTCTGATACCATCTTAGAAATCGTGGTTGGGGCTAACACAAAACTGGCTTGTGAGGTGAGGATTGCCCCCACTTATAAACACATTGTCAGGCCATCACCTATCCGATGTGGGACTCTGAACACTTAGGATTCCAATGCCATTCATAGAACAGACAAGCCGGAGAATTTGATCGATTCAAACGCCATCTCCACGACAAAATCTTTATCTCCTTCACTAGCTCTTCCACTTCTCCAATTTTAATGTTGAAAACTCTATCATTCCTAGATCGCCAAATACCCCACACCACCGCATGCCAAATCATCTGAAACCCGTTACGAATCTTTTTGTAGCCCGAGGCACCCTCCCAACTCTCCCATAACAGGAACAGATTTGGTGGAATTAAAAAAATCATTCCCACCCATCTCATAACACTATCCCACACCTTCATGGCAAACTCACAATGGAGGAACAAATGGTTAGCCGATTCCTCCTCCCCTTCACACATCACACAATCTAAAGAGGTTTCTGGTAATAGGACTTGTCTTAGCGAAAGATTAGTCTTGGTGGGAATCCGATTATAAAGGAGTTTTCAAGAGAACGCCGAGACTTTAGAAGGAGCCACACTCTTCCAAATCCTGAAGAATACCCACAATACTTGTATTACGTGTTAATGCTAATAGAGTTGTTTAATGATAGTCTTTTTACTTTGTTTTTGTTCAATTTTATTAGTTATGATTCATGGGTTTTGAGTGTTGATTCGTTTTGTCCATCGAGATACACACATAAAATTTAGTGTTTAGTTTTTCAATTGGGTTTTCAAATTTGCTATTTGGGTTTATGAAGTTAAGTATTACATGTAGTATGTATTAATGTTAACATAGTTGTTGATTGGTTATGAAAAGTGGAAGATATGTTCTCCCCCAATTTTTTTTATGTTCTGATGTTGATTATGTTATGTTATGTTATAGAGTTGAAGTGAAATTTTTTCTGATATTTTTTTTTTGATGTTCAAATGTTTTTGTTTATTGGGTTATTTTGACTTTGATATAGGCAAGAGGCAAGCCGAGGAAGAAGTCGAGGAAGTTTCTTCAAAGAAGCAAAAGGTAGATGATGAGGTTGCTGCGAAACAAAAGGTATTGAAAGTAGTCAAAATTAGTTCGGAGGAATCCTTTCATGAATTTGAGGATGTGGTATTATATTTCAATGTATATACCCTTAATTTTATATCAATGTATTTACTGGTTTTTTAAGATGGCCGTTTTAATTAAACATTTTTGTGTCATGGTTTAGAACCCTGCAACAAAAGTTGTTGCACCTAAAAGTGGGAGTGCACCTGAAAAGAAAGCGGATAATTATTTTGTTTCATCTTCTGAGGAATCTTCTGATGAAGATGAGGTATTAGACATTTTGAAGTTTATTGCATGGTGATAGTATCCTTAATTTTATATCATTGCATTTACTGGTTTTATAAAATTCCCTTTTTAATTAAACTTTTTTGTTTCATGGTTTAGAAACCTGCTGCAGAAGTTGTTCCTTCCAAAATAGGGAGTGCACCCACAAAGAAGGCTGATAGTTCTGACGAAGAATCTGACGAATCTTTTGATGAAGATGTGGTGAGTTAAACCTTTCATATCATCCATATTGTAACCTTCTAACTCTTAGTTGGTGTTTTGTGATACCTCAACATTTCAATATATGTCCTACATTCATTCGTGAGGGTACCCCTAATGGGTTGAAGACCATATCAACAGGTCTTCCATCTTGCAAATAAGACATATCCTGTCTAGACAAAATCTTTGAAACGATACCCTTAATGTGATTGCAACTTCTAATACCCTATAATTCCAATGGTTGTATGGTTGGACTCCCATATATATAACAATAACCATTAATAGTTGTAACCTAACTATCAGTTGGGGATTTGTGATACCTCTAATAATTTGCGTTCGTTCTAAAAATGCCCTTTTTAATTCGGGAATTTTTTTATTTTGTTGATGAAGATGAGGTATTAGACATTTTGAAGTTTATTAGACATTTGAAGTTTATTGTATGATGATGATAATAGCATTTAGTTTATTGCATGATATTTCTTTATCTTATATCTTATATTAGACATTGTTTTTGCAGCCTAATACCCCAGCTACACAAAATGTGAACAGTCATGTGAAGACAATATATGTTGGGAACTTATCCTTCAGTGTGCAAAAATCTGACATGTACTTATTTTTCTCACTCATGTGATTCTTGGTTATTTTATTTTATGTTTTATTTGTCTAACTTTGAAATTATTCAGAGAAAAATTCTTCCAAGATTGTGGAAAAGTTATTGATGTACGTCTTGCTTCTCGTAAGGATGGAAAGCTTAAAGGCTTTGGACATGTTGAGTTTGCAACTGCAAAGGCAGCCCAACACGTAAGCTCTTGAAATCTTTTCAACTTTTGTGGATTTTATGAAAACTCATTTTGATTGTGTCGAAGGTATTCAGAGATCAAAATAACTATTAGTCTATTACCATTTTTAATATTAGGCACTTAAGATGAATGGGCAAGAACTATTGCAACGTGCTGTCCGACTTGATTTAGCTCGGGAGAGGGGTGCATATACTCCTAATAATAACAGGTAATTACTGTATATACAAGAAGTTTTCTTTTAACTACGTTTATGCCTCACTTGTTTCGATTCCATTATTTGTTACTTTTTTCAATAGGCTTAAATGCACTTTTGACCCCGTTTCTTCTAATGTTGTATTGAAAACTTTACTTCATCGACTGTTTACAGGCGTACAGGATTCTATAAACCAGGCCTATACCAAGGTATATTTTCCTCTTTTTGCTGTTGTACTATGTTCTGCCAATGGTTTTTCAACAATATTTCTTGAACAACTTCTCGATGAATAGGGTTACATAACATTGTCTAAATACTATTTTTACGAAAAATATGATAAAACGAGCTTTCATCTTAGTGAGACACACAGATTAATTTAACTTGTCATTTTTCAGGGATAAAACGAGCTTCAAGCGTGGTTCTCTTTTTCTAATTAATTTAACTTGTCATTTTTCAGGGAAAAAGACTACTTTTGCCGACGACTAGGGTGGCAGTTTTGTTGCTCAGTTTTGGTGAAGATCTTATGTAACGGAAGTTTTTGTGATTCCTAGTCTCATATATCAGGGTATTGGAATTCCCGTAGCTATTTGTAGATGTTTATTACATTTGCTAGTTGAAAGATACTCTATCTAAAATTAGGTGTTATTTTTTCTAATTTTCTTTCTAATTAGATGTTTATTACAACGTTTATTATTTCCACTAACATACATTTATATTACATTTCAATCATCCTTAAATTTTTTTTCAACCGCAATTAGTAATGATGTTTTAATAAATGATACATATTTTACCGTTAAATCAAAACTATCAACCATTTTTTAATAAACATATAAAACTTAAATGAGACATCTAATATGAGACTAATGGAGTATTGCTAACTTGTGCCGTTGGGGCACTAGTTAAGAAGCTAAACATGAAAAAATTTTAAAAGTCTAAAAGACACTACAAAAAAATAGGGTAATTGCGGCGACTAAATTTCGATGATTGTGGCGGTTTTAGCCGCCACTATCAACCAATATGGCGGTTCACAAAACTGCTGTAATTTTTGCTACAAAGATTACTACAAGGAGTATCCGTAAATCCTTACTCCACTAACCATATCGAGATTAGTAGATTAAATATTTTCTATGATTATCCATGTTCGAACTTAATATCTGAGTGATGTTTGTCATTCCGTGTATTCCAATAAAAAAAATTGGTATAGTGAGTTGGCAAGCAAGCAAAGGTACTTGTGTAAGTAATTTGTAACATATCTCGAACTTTGTAAACTCACTACAAATCCAATCCTTCAGAGACAACCAAGACAAGGGAGTAAGGAAGAGGTCCATAACAAGGGCTAAACTCCAACTAAACAACATGAATTTGGATGAACTCAACAACAAAAAGACTCTCACGCTAAGAAAGATGAAGCATTACCCCTAAAAGGGAGAAAAAAGCAAGAGAACTGACCCTCGGCCAAGGGAATAATGATCCATTGCAGAGGGAGACGCTTAAGGAGATATGGATCCATGCACAAAGGAACACAATCAAAGCAGCAAAGAGCCACAAAGTTACCCCTCATCAGCCTACCTGGACCACCACAACTGCGATCCTACAAGAGTCGAGCCTGAAGGGCATCTTCTAA

Protein sequence

>MS.gene30580.t1

MVSPGVVVRGATPVDLYKILVNDVFPDVDTQSLVNGKILQVAADDLLGIIFGYIVFDVGELKRTSYGHITSLFVSPIFRRRGHATRLATMTEKALEKQGAAHVSVLLPKTNTDTLLFFEKMGYEEEAVTSNNIDGNDDDANVIMTKKLKGKRMHSAENEGSVLNEPHEVKVLHLRVCPDEDEKPAVEAVPSKIGNAPAKKADSSDEESDESSDEDEEMHNCHQSKRQAEEEVRAVTSKKQKVDEVAAKQKTIYVGNLSFKAQESDMYLFFSLVILDCGMVADVCLGYGKRKRPLGYAHVEFETAEEAKRALDKNGEKLLDRDVRLQEAREWRPYPLFIGSNNSAESGGGGFVRGFGKSNGEDENPEAEAVSSKIGSAPEKKADIHFVSSSEESSDEDESGAEESPKIRYARNVSPDVVLRNATSDDIFKILVDYLLPDVDLESLENGKILQVIADDRQDAILGYVIFDVVEPKSNGCGHITSLFVNPIFRREGVASKLVESAEKDLRDKQGAAYVSVPVPKTNSDGLLFFEKMGYEKEAVKSNYIDGKDDANVIMTKKFEGKQMHYAETEGKKQAEEEVKEVTSKKQKVDDEVAAKQKNPEAEAVPSKIGSAPANKADSSDEESDESSDEDESGAEESPKIRYARYVSPNVVLRNATSDDIFKILVDYLLPDVDLESLENGKILQVIADDRQDAILGYVIFDVVEPKSNGCGHITSLFVNPIFRREGVASKLVESAEKDLRDKQGAVYVSVPVPKTNSDGLLFFKKMGYEKEAVKSNNIDGKDDANVIMTKKLEGKQMHYAETEGKRQAEEEVEEVSSKKQKVDDEVAAKQKVLKVVKISSEESFHEFEDVNPATKVVAPKSGSAPEKKADNYFVSSSEESSDEDEKPAAEVVPSKIGSAPTKKADSSDEESDESFDEDVPNTPATQNVNSHVKTIYVGNLSFSVQKSDIEKFFQDCGKVIDVRLASRKDGKLKGFGHVEFATAKAAQHALKMNGQELLQRAVRLDLARERGAYTPNNNREKKARELTLGQGNNDPLQRETLKEIWIHAQRNTIKAAKSHKVTPHQPTWTTTTAILQESSLKGIF