Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30854.t1 | XP_013468304.1 | 97.9 | 982 | 21 | 0 | 8 | 989 | 1 | 982 | 0.00E+00 | 1822 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30854.t1 | Q0WQJ7 | 60.4 | 980 | 380 | 4 | 10 | 988 | 2 | 974 | 0.0e+00 | 1095.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30854.t1 | A0A072VL62 | 97.9 | 982 | 21 | 0 | 8 | 989 | 1 | 982 | 0.0e+00 | 1822.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene30854 | 0.849083 | 4.06E-60 | -1.69E-46 |
| MS.gene049418 | MS.gene30854 | 0.805844 | 1.10E-49 | -1.69E-46 |
| MS.gene049596 | MS.gene30854 | 0.836785 | 7.63E-57 | -1.69E-46 |
| MS.gene04985 | MS.gene30854 | 0.823139 | 1.63E-53 | -1.69E-46 |
| MS.gene049989 | MS.gene30854 | 0.902109 | 1.36E-78 | -1.69E-46 |
| MS.gene050297 | MS.gene30854 | 0.921976 | 1.79E-88 | -1.69E-46 |
| MS.gene050310 | MS.gene30854 | 0.838668 | 2.51E-57 | -1.69E-46 |
| MS.gene050648 | MS.gene30854 | 0.849212 | 3.74E-60 | -1.69E-46 |
| MS.gene051067 | MS.gene30854 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene051094 | MS.gene30854 | 0.858233 | 9.48E-63 | -1.69E-46 |
| MS.gene05124 | MS.gene30854 | 0.806838 | 6.77E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene30854 | 0.811011 | 8.67E-51 | -1.69E-46 |
| MS.gene051629 | MS.gene30854 | 0.830307 | 3.16E-55 | -1.69E-46 |
| MS.gene052367 | MS.gene30854 | 0.843974 | 1.01E-58 | -1.69E-46 |
| MS.gene053416 | MS.gene30854 | 0.841698 | 4.06E-58 | -1.69E-46 |
| MS.gene053417 | MS.gene30854 | 0.84052 | 8.27E-58 | -1.69E-46 |
| MS.gene05369 | MS.gene30854 | 0.826396 | 2.78E-54 | -1.69E-46 |
| MS.gene054643 | MS.gene30854 | 0.854477 | 1.20E-61 | -1.69E-46 |
| MS.gene055411 | MS.gene30854 | 0.860991 | 1.40E-63 | -1.69E-46 |
| MS.gene055537 | MS.gene30854 | 0.800158 | 1.64E-48 | -1.69E-46 |
| MS.gene055764 | MS.gene30854 | 0.841502 | 4.57E-58 | -1.69E-46 |
| MS.gene055781 | MS.gene30854 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene30854 | 0.819141 | 1.36E-52 | -1.69E-46 |
| MS.gene056041 | MS.gene30854 | 0.825547 | 4.42E-54 | -1.69E-46 |
| MS.gene056526 | MS.gene30854 | 0.825474 | 4.60E-54 | -1.69E-46 |
| MS.gene057004 | MS.gene30854 | 0.829689 | 4.47E-55 | -1.69E-46 |
| MS.gene057483 | MS.gene30854 | 0.823262 | 1.52E-53 | -1.69E-46 |
| MS.gene058196 | MS.gene30854 | 0.855185 | 7.48E-62 | -1.69E-46 |
| MS.gene058197 | MS.gene30854 | 0.874095 | 8.82E-68 | -1.69E-46 |
| MS.gene058198 | MS.gene30854 | 0.872906 | 2.22E-67 | -1.69E-46 |
| MS.gene058818 | MS.gene30854 | 0.833821 | 4.28E-56 | -1.69E-46 |
| MS.gene058844 | MS.gene30854 | 0.806029 | 1.00E-49 | -1.69E-46 |
| MS.gene059300 | MS.gene30854 | 0.906252 | 1.81E-80 | -1.69E-46 |
| MS.gene060473 | MS.gene30854 | 0.838273 | 3.17E-57 | -1.69E-46 |
| MS.gene060565 | MS.gene30854 | 0.838611 | 2.59E-57 | -1.69E-46 |
| MS.gene06057 | MS.gene30854 | 0.89731 | 1.59E-76 | -1.69E-46 |
| MS.gene061260 | MS.gene30854 | 0.845777 | 3.29E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 175 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTGTTCTTCATCGCTTAA+TGG | 0.149663 | 1.1:-49817791 | None:intergenic |
| AGAGCAAATTACAGCAATTT+TGG | 0.150273 | 1.1:+49822449 | MS.gene30854:CDS |
| AAAATATTTGTTTCACAAAT+TGG | 0.194436 | 1.1:-49822719 | None:intergenic |
| AACTGCACTGTCTTTGCTTA+TGG | 0.203169 | 1.1:+49818097 | MS.gene30854:CDS |
| ATGTATTTGCTAGCTCCTTC+AGG | 0.233318 | 1.1:-49821717 | None:intergenic |
| TGTCGTGTAATGAAAATAAA+AGG | 0.235844 | 1.1:+49817834 | MS.gene30854:CDS |
| TTTACCTGATTTCAGTAGTT+TGG | 0.254932 | 1.1:-49820878 | None:intergenic |
| GGCACTTTCCCACTGCTTCC+TGG | 0.257257 | 1.1:-49823171 | None:intergenic |
| ATGATCTTCAAGAGAATTAC+AGG | 0.274538 | 1.1:+49820815 | MS.gene30854:CDS |
| GATTTGCATACAACCATTAT+AGG | 0.274995 | 1.1:+49821460 | MS.gene30854:CDS |
| CAAGCTTAATCTTGTTGATT+TGG | 0.283009 | 1.1:+49818785 | MS.gene30854:CDS |
| AATTGCTGTAATTTGCTCTA+AGG | 0.284276 | 1.1:-49822445 | None:intergenic |
| ATTGATCTCTGTTGTGATTT+CGG | 0.296531 | 1.1:-49818025 | None:intergenic |
| CGTGAAAGCTTCATCTGATA+TGG | 0.301727 | 1.1:+49821744 | MS.gene30854:CDS |
| ATTCTGCGCATGTACCTTAC+AGG | 0.303011 | 1.1:+49819641 | MS.gene30854:CDS |
| TGAATCGGGACGACGGCGTT+CGG | 0.323394 | 1.1:-49817598 | None:intergenic |
| TCTTTGTTATCCTGACGGTT+AGG | 0.329799 | 1.1:-49817639 | None:intergenic |
| CCTACTTTCTTAGACTGATC+TGG | 0.346314 | 1.1:-49817528 | None:intergenic |
| GAAGAAACCTGTAGCCCTTA+TGG | 0.347923 | 1.1:+49818464 | MS.gene30854:CDS |
| AACTTTCTCTACTTGTTTGT+TGG | 0.348646 | 1.1:-49817882 | None:intergenic |
| TCATCTCAAAATTTGTCAAT+TGG | 0.354938 | 1.1:-49822305 | None:intergenic |
| CAATTTCCTTCTTGTTCTCA+TGG | 0.355135 | 1.1:-49823581 | None:intergenic |
| CAGTCTAAGAAAGTAGGGTT+AGG | 0.355683 | 1.1:+49817534 | MS.gene30854:CDS |
| CTTAATCTTGTTGATTTGGC+TGG | 0.358574 | 1.1:+49818789 | MS.gene30854:CDS |
| TTCTTCACTCTTTCTTCAAT+AGG | 0.359638 | 1.1:-49818447 | None:intergenic |
| TACATATTCATTAACTTCAT+TGG | 0.360766 | 1.1:-49822682 | None:intergenic |
| GAATCGGGACGACGGCGTTC+GGG | 0.361733 | 1.1:-49817597 | None:intergenic |
| GCAAGAACAGAAACTGGATT+TGG | 0.371508 | 1.1:+49820660 | MS.gene30854:CDS |
| TACTTCCTCTTGTTGTTGAA+TGG | 0.373061 | 1.1:-49822050 | None:intergenic |
| GGCCTGGTAGAACTGTCTTC+TGG | 0.373427 | 1.1:-49818426 | None:intergenic |
| CGAGAACTTCATTGACAATT+GGG | 0.374555 | 1.1:-49818066 | None:intergenic |
| GGAGGGTGGGATGAGAAATA+AGG | 0.378900 | 1.1:+49818150 | MS.gene30854:CDS |
| TCGAGAACTTCATTGACAAT+TGG | 0.379235 | 1.1:-49818067 | None:intergenic |
| CAAATACAGTGGACTGTTCC+AGG | 0.380612 | 1.1:+49823153 | MS.gene30854:CDS |
| AAGATCATGCAATTCATTGC+TGG | 0.381963 | 1.1:-49820800 | None:intergenic |
| ATGACAGAAATTTATTCATC+AGG | 0.390094 | 1.1:+49821685 | MS.gene30854:CDS |
| AACAGAGCAAGAACAGAAAC+TGG | 0.390278 | 1.1:+49820654 | MS.gene30854:CDS |
| CTTTGTTATCCTGACGGTTA+GGG | 0.391090 | 1.1:-49817638 | None:intergenic |
| GGATTTGGAATGCGAGCTTA+AGG | 0.393290 | 1.1:+49820675 | MS.gene30854:CDS |
| CATCTTGACAAACCATGCTT+TGG | 0.394664 | 1.1:+49823359 | MS.gene30854:CDS |
| TGTGTCTGTGTCATTATCTA+TGG | 0.400091 | 1.1:+49823392 | MS.gene30854:CDS |
| CCATCTTCCATAAGGGCTAC+AGG | 0.404889 | 1.1:-49818471 | None:intergenic |
| CCGATCAGAGCCTCGTGAAT+CGG | 0.406849 | 1.1:-49817613 | None:intergenic |
| TAGTCCGTCTGCTTATTGTT+TGG | 0.417215 | 1.1:+49819824 | MS.gene30854:CDS |
| TGATTTCAGTAGTTTGGAAA+TGG | 0.423803 | 1.1:-49820872 | None:intergenic |
| GCTAGTTGTTTCAAAGTTGA+AGG | 0.424996 | 1.1:+49820837 | MS.gene30854:CDS |
| GGAAATTGTTGAAGGACAAC+TGG | 0.428679 | 1.1:-49823193 | None:intergenic |
| TCTCAAAATTTGTCAATTGG+TGG | 0.430630 | 1.1:-49822302 | None:intergenic |
| TTTGTTGAAGGACTTGTACT+TGG | 0.431244 | 1.1:+49820022 | MS.gene30854:CDS |
| CACTCTTTCTTCAATAGGCC+TGG | 0.432300 | 1.1:-49818442 | None:intergenic |
| TTGGTGCAGTCGTTCACATT+CGG | 0.433157 | 1.1:+49818698 | MS.gene30854:intron |
| TTGCTCTACTAGCATAGTCT+AGG | 0.434387 | 1.1:-49819863 | None:intergenic |
| GTGCCTTGTTAATGATTACT+TGG | 0.435453 | 1.1:+49823695 | MS.gene30854:CDS |
| GAAATTTATTCATCAGGAGT+TGG | 0.440491 | 1.1:+49821691 | MS.gene30854:CDS |
| TGTATTTGCTAGCTCCTTCA+GGG | 0.441154 | 1.1:-49821716 | None:intergenic |
| AAATTTATTCATCAGGAGTT+GGG | 0.441797 | 1.1:+49821692 | MS.gene30854:CDS |
| TTCTGTGACGACACAATTGT+TGG | 0.445299 | 1.1:+49823605 | MS.gene30854:CDS |
| CAGGGCCGTGCTAGAGAAGC+AGG | 0.446800 | 1.1:+49819562 | MS.gene30854:intron |
| CGATCAGAGCCTCGTGAATC+GGG | 0.450247 | 1.1:-49817612 | None:intergenic |
| CAAGCATGGTGGAAATATAT+CGG | 0.453919 | 1.1:+49823650 | MS.gene30854:CDS |
| TTGAGAAATAGATCCTATAA+TGG | 0.454865 | 1.1:-49821473 | None:intergenic |
| AAACGAAAACTCACCAATCC+TGG | 0.458920 | 1.1:-49822779 | None:intergenic |
| TGACAATTGGGGAAATTGCT+TGG | 0.459148 | 1.1:-49818054 | None:intergenic |
| CTACTTTCTTAGACTGATCT+GGG | 0.463811 | 1.1:-49817527 | None:intergenic |
| ATTTCCAAACTACTGAAATC+AGG | 0.466246 | 1.1:+49820874 | MS.gene30854:CDS |
| TTCCTTTGCACGCTCAATCA+AGG | 0.470672 | 1.1:-49820989 | None:intergenic |
| CCTGTAGCCCTTATGGAAGA+TGG | 0.471287 | 1.1:+49818471 | MS.gene30854:CDS |
| GTCGTGTAATGAAAATAAAA+GGG | 0.472693 | 1.1:+49817835 | MS.gene30854:CDS |
| GGACGACGGCGTTCGGGTCG+AGG | 0.473129 | 1.1:-49817591 | None:intergenic |
| TCATTACACGACACCACCTT+CGG | 0.475943 | 1.1:-49817824 | None:intergenic |
| AAAGGTAGTGTGTTGTTAAG+AGG | 0.477663 | 1.1:+49818495 | MS.gene30854:CDS |
| AAATGAAATCTATACTCTGT+TGG | 0.480457 | 1.1:+49818545 | MS.gene30854:CDS |
| TTCTTGCAGATCACAAAGAA+AGG | 0.483227 | 1.1:+49821374 | MS.gene30854:intron |
| ATACTTTCTGACTGAGGTTG+AGG | 0.484486 | 1.1:-49820514 | None:intergenic |
| TGTTTCAAAGTTGAAGGAGA+AGG | 0.485762 | 1.1:+49820843 | MS.gene30854:CDS |
| GTCTTTGCTTATGGACAGAC+CGG | 0.486032 | 1.1:+49818106 | MS.gene30854:CDS |
| CATGTTAATATGAACCTGTA+AGG | 0.486111 | 1.1:-49819655 | None:intergenic |
| CTTTATCTTTGTTATCCTGA+CGG | 0.486717 | 1.1:-49817644 | None:intergenic |
| GCTTATGGACAGACCGGGAC+TGG | 0.491101 | 1.1:+49818112 | MS.gene30854:CDS |
| AAAATTTGACGAACTGCTCT+CGG | 0.492168 | 1.1:-49818315 | None:intergenic |
| ACTTCCAGGTGCACTAATGA+TGG | 0.493393 | 1.1:+49823557 | MS.gene30854:intron |
| CATTGCTTAACAAGAGAAGC+AGG | 0.496816 | 1.1:+49818601 | MS.gene30854:CDS |
| GTTCTTGTGGAAATTGTTGA+AGG | 0.497381 | 1.1:-49823201 | None:intergenic |
| CCAGATCAGTCTAAGAAAGT+AGG | 0.498378 | 1.1:+49817528 | MS.gene30854:CDS |
| AAGAGGACTTGAAGAAGAAT+CGG | 0.500002 | 1.1:+49818512 | MS.gene30854:CDS |
| TAGAGGATTGTCTCCAGGAT+TGG | 0.501498 | 1.1:+49822766 | MS.gene30854:CDS |
| GGTGATTTAACTGCTGAGGC+TGG | 0.508047 | 1.1:+49818285 | MS.gene30854:CDS |
| TATGTGAAAGAAACAGTAAT+TGG | 0.508611 | 1.1:+49818738 | MS.gene30854:CDS |
| AACCATAAACAGGAAGAGGC+TGG | 0.509268 | 1.1:+49822405 | MS.gene30854:intron |
| AGGATATTACGAGATTCCTT+AGG | 0.510487 | 1.1:+49819768 | MS.gene30854:CDS |
| TCTCTGCAAGATTGTTCTTG+TGG | 0.514439 | 1.1:-49823214 | None:intergenic |
| AATTGTTGAAGAAACTCAAA+AGG | 0.514692 | 1.1:+49822272 | MS.gene30854:CDS |
| TCAGAGATAGTAAGCTTACA+AGG | 0.521004 | 1.1:+49819748 | MS.gene30854:intron |
| AGAGGCTGGAAGAGATGAGG+AGG | 0.521605 | 1.1:+49822419 | MS.gene30854:CDS |
| TTCTTTCACATAGACAGTAA+TGG | 0.521841 | 1.1:-49818727 | None:intergenic |
| AGTCTAAGAAAGTAGGGTTA+GGG | 0.523529 | 1.1:+49817535 | MS.gene30854:CDS |
| TGATCGGAACCCTAACCGTC+AGG | 0.523617 | 1.1:+49817629 | MS.gene30854:CDS |
| GATGCTGTCAATCACATCAT+TGG | 0.525717 | 1.1:-49821987 | None:intergenic |
| TCAGAAAATATACTACGTTC+CGG | 0.527487 | 1.1:+49818813 | MS.gene30854:CDS |
| ATATTACGAGATTCCTTAGG+AGG | 0.529688 | 1.1:+49819771 | MS.gene30854:CDS |
| GCGCATTTATCACACGTCCC+AGG | 0.530468 | 1.1:-49819609 | None:intergenic |
| GCCCTTATGGAAGATGGAAA+AGG | 0.531692 | 1.1:+49818477 | MS.gene30854:CDS |
| CAAGTGTGCAACAGTCTAAG+AGG | 0.531813 | 1.1:+49822613 | MS.gene30854:CDS |
| ATGGATGCTGATTATGATGC+AGG | 0.532675 | 1.1:+49823411 | MS.gene30854:CDS |
| TACAATAGAGGATTGTCTCC+AGG | 0.533289 | 1.1:+49822761 | MS.gene30854:CDS |
| CAGATCAGTCTAAGAAAGTA+GGG | 0.533619 | 1.1:+49817529 | MS.gene30854:CDS |
| TGCTCTACTAGCATAGTCTA+GGG | 0.537773 | 1.1:-49819862 | None:intergenic |
| CAGCTGTAAAGCTACAATAG+AGG | 0.540704 | 1.1:+49822749 | MS.gene30854:CDS |
| CAGCACATGCTCTGGAAGCA+AGG | 0.549984 | 1.1:+49821653 | MS.gene30854:CDS |
| TGCAGATCACAAAGAAAGGA+TGG | 0.550426 | 1.1:+49821378 | MS.gene30854:intron |
| GACTGGTAAAACTTATACGA+TGG | 0.551667 | 1.1:+49818129 | MS.gene30854:CDS |
| CTCCAGAAGACAGTTCTACC+AGG | 0.551796 | 1.1:+49818424 | MS.gene30854:CDS |
| TCTCCCCTGCTTCTCTAGCA+CGG | 0.553152 | 1.1:-49819567 | None:intergenic |
| TGCAGATGTACGAGCAGCGA+GGG | 0.557824 | 1.1:+49820145 | MS.gene30854:intron |
| AGAAACAGTAATTGGTGATG+AGG | 0.558678 | 1.1:+49818746 | MS.gene30854:CDS |
| TTGTCAATGAAGTTCTCGAC+GGG | 0.559114 | 1.1:+49818071 | MS.gene30854:CDS |
| CGCATTTATCACACGTCCCA+GGG | 0.559660 | 1.1:-49819608 | None:intergenic |
| CAAAGAAGAAGCTGAAAAGA+AGG | 0.562709 | 1.1:+49820205 | MS.gene30854:CDS |
| AACAAGAGCTTACTCACCCT+GGG | 0.564453 | 1.1:+49819592 | MS.gene30854:CDS |
| ACAGAAACAACTTAAATGCA+TGG | 0.566060 | 1.1:+49821498 | MS.gene30854:CDS |
| TGCAGGAACACACAATCTGC+TGG | 0.572017 | 1.1:+49823428 | MS.gene30854:CDS |
| GAAATTGAGAGAATGAAAGA+AGG | 0.574967 | 1.1:+49820044 | MS.gene30854:CDS |
| CCGATTCACGAGGCTCTGAT+CGG | 0.575179 | 1.1:+49817613 | MS.gene30854:CDS |
| AAGTATTATTTCAGCACGAG+TGG | 0.575288 | 1.1:+49822188 | MS.gene30854:CDS |
| AAACAAGAGCTTACTCACCC+TGG | 0.578635 | 1.1:+49819591 | MS.gene30854:CDS |
| TGGACTGTTCCAGGAAGCAG+TGG | 0.580005 | 1.1:+49823162 | MS.gene30854:CDS |
| ATTCTCCATTCAACAACAAG+AGG | 0.580683 | 1.1:+49822045 | MS.gene30854:CDS |
| AGAGGCGTCAAGGAATATGC+AGG | 0.581642 | 1.1:+49822587 | MS.gene30854:CDS |
| ACTACGTTCCGGAGCACGTG+AGG | 0.582073 | 1.1:+49818824 | MS.gene30854:CDS |
| TGCCTTGATTGAGCGTGCAA+AGG | 0.586125 | 1.1:+49820987 | MS.gene30854:CDS |
| AACATCTAAGAGAACTGCTA+TGG | 0.588510 | 1.1:+49822479 | MS.gene30854:CDS |
| AAAACTTATACGATGGAGGG+TGG | 0.588812 | 1.1:+49818136 | MS.gene30854:CDS |
| TTTACAGTTTCTTGCCACTG+TGG | 0.590640 | 1.1:+49821955 | MS.gene30854:intron |
| TTTAGGTCTCAGAGGCGTCA+AGG | 0.592242 | 1.1:+49822577 | MS.gene30854:intron |
| GGGCCGTGCTAGAGAAGCAG+GGG | 0.592427 | 1.1:+49819564 | MS.gene30854:intron |
| TTCAGCACGAGTGGTTTCAG+AGG | 0.594099 | 1.1:+49822197 | MS.gene30854:CDS |
| TTTGCTCATCAAGAGAATTG+TGG | 0.598391 | 1.1:-49822009 | None:intergenic |
| TGGTAAAACTTATACGATGG+AGG | 0.605460 | 1.1:+49818132 | MS.gene30854:CDS |
| GCGTGCAAAGGAAATGTGTA+CGG | 0.606609 | 1.1:+49820999 | MS.gene30854:CDS |
| ACGATCGAATGTTCCGAAGG+TGG | 0.607596 | 1.1:+49817811 | MS.gene30854:CDS |
| AGCCTCGTGAATCGGGACGA+CGG | 0.613226 | 1.1:-49817605 | None:intergenic |
| CGCCGTCGTCCCGATTCACG+AGG | 0.616893 | 1.1:+49817603 | MS.gene30854:CDS |
| ATGCGAGCTTAAGGATTGCA+AGG | 0.618764 | 1.1:+49820684 | MS.gene30854:CDS |
| CGAGCAGCGAGGGAAAAGAA+TGG | 0.620002 | 1.1:+49820155 | MS.gene30854:CDS |
| TATTACGAGATTCCTTAGGA+GGG | 0.621917 | 1.1:+49819772 | MS.gene30854:CDS |
| GATGGACCATGAGAACAAGA+AGG | 0.625243 | 1.1:+49823575 | MS.gene30854:CDS |
| GGAAGAGGCTGGAAGAGATG+AGG | 0.629449 | 1.1:+49822416 | MS.gene30854:intron |
| GGGTGGTGATTTAACTGCTG+AGG | 0.631701 | 1.1:+49818281 | MS.gene30854:intron |
| ATTGTCAATGAAGTTCTCGA+CGG | 0.631832 | 1.1:+49818070 | MS.gene30854:CDS |
| GGTAAAACTTATACGATGGA+GGG | 0.633376 | 1.1:+49818133 | MS.gene30854:CDS |
| AGGGCCGTGCTAGAGAAGCA+GGG | 0.634214 | 1.1:+49819563 | MS.gene30854:intron |
| ACGTGTGATAAATGCGCTCG+TGG | 0.634469 | 1.1:+49819615 | MS.gene30854:CDS |
| TCTTCCAAACAATAAGCAGA+CGG | 0.637285 | 1.1:-49819828 | None:intergenic |
| AAACTTATACGATGGAGGGT+GGG | 0.638061 | 1.1:+49818137 | MS.gene30854:CDS |
| ATCTATACTCTGTTGGAACG+AGG | 0.638922 | 1.1:+49818552 | MS.gene30854:CDS |
| ATCAGGAGTTGGGACCCTGA+AGG | 0.641988 | 1.1:+49821702 | MS.gene30854:CDS |
| CGGGGAATACTTTCTGACTG+AGG | 0.646451 | 1.1:-49820520 | None:intergenic |
| GAGAACTTCATTGACAATTG+GGG | 0.654278 | 1.1:-49818065 | None:intergenic |
| AATCTGCTGGCAGATGTGAA+TGG | 0.657716 | 1.1:+49823441 | MS.gene30854:CDS |
| GCTCTGTTAAGTAGAGCTCA+CGG | 0.658800 | 1.1:-49820639 | None:intergenic |
| ACAACGATCGAATGTTCCGA+AGG | 0.660517 | 1.1:+49817808 | MS.gene30854:CDS |
| GATGAGGAGTTGATTAAGTG+TGG | 0.662029 | 1.1:+49818762 | MS.gene30854:CDS |
| AGTTCATTACAAGACAAGCA+TGG | 0.667182 | 1.1:+49823636 | MS.gene30854:CDS |
| GCAATGCAGTTCAAATACAG+TGG | 0.670530 | 1.1:+49823142 | MS.gene30854:intron |
| GAAATTGTTGAAGGACAACT+GGG | 0.671341 | 1.1:-49823192 | None:intergenic |
| TCTTTGCTTATGGACAGACC+GGG | 0.682220 | 1.1:+49818107 | MS.gene30854:CDS |
| GGACTGTTCCAGGAAGCAGT+GGG | 0.685626 | 1.1:+49823163 | MS.gene30854:CDS |
| ATACCAAGTAATCATTAACA+AGG | 0.690518 | 1.1:-49823698 | None:intergenic |
| AAATATAAAGAATAAGCCTG+AGG | 0.698802 | 1.1:+49819887 | MS.gene30854:CDS |
| ATGCAGATGTACGAGCAGCG+AGG | 0.713547 | 1.1:+49820144 | MS.gene30854:intron |
| AGATCACAAAGAAAGGATGG+AGG | 0.714530 | 1.1:+49821381 | MS.gene30854:intron |
| TGGAACGAGGAGCATCAAAG+AGG | 0.716495 | 1.1:+49818565 | MS.gene30854:CDS |
| TACTTTCTTAGACTGATCTG+GGG | 0.719246 | 1.1:-49817526 | None:intergenic |
| TCATTACAAGACAAGCATGG+TGG | 0.719565 | 1.1:+49823639 | MS.gene30854:CDS |
| ATTGGCTTCAAGAACCACAG+TGG | 0.777556 | 1.1:-49821969 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAATATTTTGTTGTTAA+AGG | - | chr1.1:49822924-49822943 | None:intergenic | 10.0% |
| !!! | CTTTTTTAAATAAGAAATTA+TGG | - | chr1.1:49820736-49820755 | None:intergenic | 10.0% |
| !! | AAAATATTTGTTTCACAAAT+TGG | - | chr1.1:49822722-49822741 | None:intergenic | 15.0% |
| !! | AAATAATAATTACGTGTATT+TGG | + | chr1.1:49818960-49818979 | MS.gene30854:intron | 15.0% |
| !! | ATCAAATTAAATTACTCTTT+AGG | + | chr1.1:49820762-49820781 | MS.gene30854:intron | 15.0% |
| !! | ATTAAAAAAAATGTGTTAGA+AGG | - | chr1.1:49822950-49822969 | None:intergenic | 15.0% |
| !! | TAATAGTATTATAACATTGT+CGG | + | chr1.1:49820268-49820287 | MS.gene30854:intron | 15.0% |
| !!! | AAAGCTAATATTTTTCTAAT+AGG | + | chr1.1:49819974-49819993 | MS.gene30854:intron | 15.0% |
| !!! | AAATTTTTTGTCATCTAAAT+TGG | + | chr1.1:49821047-49821066 | MS.gene30854:CDS | 15.0% |
| !!! | AAGCATATTTTCTTTTAAAA+GGG | - | chr1.1:49821213-49821232 | None:intergenic | 15.0% |
| !!! | AATTTTTTGTCATCTAAATT+GGG | + | chr1.1:49821048-49821067 | MS.gene30854:CDS | 15.0% |
| !!! | ACAAATAATTTTAGAATTCA+CGG | - | chr1.1:49821892-49821911 | None:intergenic | 15.0% |
| !!! | TTCAATACTTATGTATATTT+TGG | - | chr1.1:49819330-49819349 | None:intergenic | 15.0% |
| !!! | TTTTAAATAAGAAATTATGG+AGG | - | chr1.1:49820733-49820752 | None:intergenic | 15.0% |
| !! | AAGAAAAAAAATGAAGAAGA+CGG | - | chr1.1:49822818-49822837 | None:intergenic | 20.0% |
| !! | AGAACTTAAAATAAAAGTGA+AGG | - | chr1.1:49820072-49820091 | None:intergenic | 20.0% |
| !! | ATAAAACACAAATTAAGCTA+GGG | - | chr1.1:49820444-49820463 | None:intergenic | 20.0% |
| !! | GATTACAGTTAAAGAAATAT+TGG | - | chr1.1:49823321-49823340 | None:intergenic | 20.0% |
| !! | GCCAAAAATTAATCAAAATT+GGG | - | chr1.1:49819157-49819176 | None:intergenic | 20.0% |
| !! | TAAAAGAAAATATGCTTCAT+GGG | + | chr1.1:49821216-49821235 | MS.gene30854:intron | 20.0% |
| !! | TAAACATCTATAAGCTTATA+TGG | - | chr1.1:49819233-49819252 | None:intergenic | 20.0% |
| !! | TAATGCAATAATATCTAGAA+AGG | - | chr1.1:49821321-49821340 | None:intergenic | 20.0% |
| !! | TACATATTCATTAACTTCAT+TGG | - | chr1.1:49822685-49822704 | None:intergenic | 20.0% |
| !! | TTAAAAGAAAATATGCTTCA+TGG | + | chr1.1:49821215-49821234 | MS.gene30854:intron | 20.0% |
| !!! | ACTTATACATTGATTCTAAA+AGG | + | chr1.1:49822352-49822371 | MS.gene30854:intron | 20.0% |
| !!! | ATTTGAAACTACTTTTGTTT+GGG | + | chr1.1:49822079-49822098 | MS.gene30854:intron | 20.0% |
| !!! | CAAAATTCACGATTATTTTT+TGG | - | chr1.1:49821414-49821433 | None:intergenic | 20.0% |
| !!! | GAAGCATATTTTCTTTTAAA+AGG | - | chr1.1:49821214-49821233 | None:intergenic | 20.0% |
| !!! | TACTGTTATGACATTTTTAA+GGG | - | chr1.1:49819933-49819952 | None:intergenic | 20.0% |
| !!! | TCGTCAAATTTTTGATATTT+TGG | + | chr1.1:49818326-49818345 | MS.gene30854:CDS | 20.0% |
| !!! | TTCACTTTTATTTTAAGTTC+TGG | + | chr1.1:49820071-49820090 | MS.gene30854:intron | 20.0% |
| !!! | TTTTGTTGTTAAAGGAAAAA+TGG | - | chr1.1:49822916-49822935 | None:intergenic | 20.0% |
| ! | AAAAAATCTGTAATACTTCC+AGG | + | chr1.1:49823543-49823562 | MS.gene30854:intron | 25.0% |
| ! | AAAGCTATCTTACTATGATA+CGG | + | chr1.1:49817933-49817952 | MS.gene30854:intron | 25.0% |
| ! | AAATATAAAGAATAAGCCTG+AGG | + | chr1.1:49819887-49819906 | MS.gene30854:CDS | 25.0% |
| ! | AAATGAAATCTATACTCTGT+TGG | + | chr1.1:49818545-49818564 | MS.gene30854:CDS | 25.0% |
| ! | AAATTTATTCATCAGGAGTT+GGG | + | chr1.1:49821692-49821711 | MS.gene30854:CDS | 25.0% |
| ! | AAGAACAAAGAACATATTGA+TGG | - | chr1.1:49821098-49821117 | None:intergenic | 25.0% |
| ! | AAGCTTACAATATTTGCTTA+TGG | + | chr1.1:49819201-49819220 | MS.gene30854:intron | 25.0% |
| ! | AATTGTTGAAGAAACTCAAA+AGG | + | chr1.1:49822272-49822291 | MS.gene30854:CDS | 25.0% |
| ! | AGATGTTTATGAAGTTACAT+GGG | + | chr1.1:49819244-49819263 | MS.gene30854:intron | 25.0% |
| ! | AGGAACAAAGAACATAAAAA+AGG | - | chr1.1:49821181-49821200 | None:intergenic | 25.0% |
| ! | ATAGAACATGCATCTAAATA+TGG | - | chr1.1:49820397-49820416 | None:intergenic | 25.0% |
| ! | ATCTAGAAAGGAAATGAATA+AGG | - | chr1.1:49821309-49821328 | None:intergenic | 25.0% |
| ! | ATGACAGAAATTTATTCATC+AGG | + | chr1.1:49821685-49821704 | MS.gene30854:CDS | 25.0% |
| ! | CAAACAAAAGTAGTTTCAAA+TGG | - | chr1.1:49822080-49822099 | None:intergenic | 25.0% |
| ! | CAACAAAGAAATGAAACAAA+AGG | - | chr1.1:49822516-49822535 | None:intergenic | 25.0% |
| ! | CACAAAAGAAAGTAATAAGA+TGG | - | chr1.1:49823498-49823517 | None:intergenic | 25.0% |
| ! | CACCCTATATTTATAAATCA+CGG | - | chr1.1:49818266-49818285 | None:intergenic | 25.0% |
| ! | CAGATACTTAAAGCAAATAA+AGG | - | chr1.1:49820232-49820251 | None:intergenic | 25.0% |
| ! | CATAAAATGCTTGTATAACT+TGG | + | chr1.1:49819435-49819454 | MS.gene30854:intron | 25.0% |
| ! | CGACTATAAGTGAATTTAAA+TGG | + | chr1.1:49819499-49819518 | MS.gene30854:intron | 25.0% |
| ! | CGCCAAAAATTAATCAAAAT+TGG | - | chr1.1:49819158-49819177 | None:intergenic | 25.0% |
| ! | GAACAAAGATATATGATACA+AGG | - | chr1.1:49820111-49820130 | None:intergenic | 25.0% |
| ! | GATAAAACACAAATTAAGCT+AGG | - | chr1.1:49820445-49820464 | None:intergenic | 25.0% |
| ! | GGAACAAAGAACATAAAAAA+GGG | - | chr1.1:49821180-49821199 | None:intergenic | 25.0% |
| ! | GTAACATAACATCATATAAC+CGG | - | chr1.1:49818219-49818238 | None:intergenic | 25.0% |
| ! | GTCGTGTAATGAAAATAAAA+GGG | + | chr1.1:49817835-49817854 | MS.gene30854:CDS | 25.0% |
| ! | TAAAACTTCTTGTAAATAGC+AGG | - | chr1.1:49819374-49819393 | None:intergenic | 25.0% |
| ! | TAATGCAATTGCAAACTTAA+TGG | + | chr1.1:49822144-49822163 | MS.gene30854:intron | 25.0% |
| ! | TAGATGTTTATGAAGTTACA+TGG | + | chr1.1:49819243-49819262 | MS.gene30854:intron | 25.0% |
| ! | TATGTGAAAGAAACAGTAAT+TGG | + | chr1.1:49818738-49818757 | MS.gene30854:CDS | 25.0% |
| ! | TATGTTCTTTGTTCTTGATA+TGG | + | chr1.1:49821102-49821121 | MS.gene30854:intron | 25.0% |
| ! | TCATCTCAAAATTTGTCAAT+TGG | - | chr1.1:49822308-49822327 | None:intergenic | 25.0% |
| ! | TCTAGAAAGGAAATGAATAA+GGG | - | chr1.1:49821308-49821327 | None:intergenic | 25.0% |
| ! | TGCAAAAATCAAATGATGAA+CGG | - | chr1.1:49821615-49821634 | None:intergenic | 25.0% |
| ! | TGCCGTGATTTATAAATATA+GGG | + | chr1.1:49818261-49818280 | MS.gene30854:intron | 25.0% |
| ! | TGTCGTGTAATGAAAATAAA+AGG | + | chr1.1:49817834-49817853 | MS.gene30854:CDS | 25.0% |
| ! | TTCTTAATGAGATAGAATCT+AGG | + | chr1.1:49823284-49823303 | MS.gene30854:intron | 25.0% |
| ! | TTGAGAAATAGATCCTATAA+TGG | - | chr1.1:49821476-49821495 | None:intergenic | 25.0% |
| ! | TTGCCGTGATTTATAAATAT+AGG | + | chr1.1:49818260-49818279 | MS.gene30854:intron | 25.0% |
| ! | TTTGCAACAATATGATTACA+GGG | + | chr1.1:49819544-49819563 | MS.gene30854:intron | 25.0% |
| !! | AAACTTAATGGATCATTGTA+GGG | + | chr1.1:49822156-49822175 | MS.gene30854:intron | 25.0% |
| !! | ACATGGTTTTCAATTATTGT+TGG | + | chr1.1:49819673-49819692 | MS.gene30854:intron | 25.0% |
| !! | CTACTGTTATGACATTTTTA+AGG | - | chr1.1:49819934-49819953 | None:intergenic | 25.0% |
| !!! | AAATTTTGAGATGAAGTTCA+AGG | + | chr1.1:49822314-49822333 | MS.gene30854:CDS | 25.0% |
| !!! | ACTGTTATGACATTTTTAAG+GGG | - | chr1.1:49819932-49819951 | None:intergenic | 25.0% |
| !!! | CAATTGTTTTTGAATCTGTT+TGG | + | chr1.1:49817989-49818008 | MS.gene30854:intron | 25.0% |
| !!! | CATTTGAAACTACTTTTGTT+TGG | + | chr1.1:49822078-49822097 | MS.gene30854:intron | 25.0% |
| !!! | GAAAGTTTTCAATTTTGACA+AGG | + | chr1.1:49817898-49817917 | MS.gene30854:CDS | 25.0% |
| !!! | GCCCAATTTTGATTAATTTT+TGG | + | chr1.1:49819153-49819172 | MS.gene30854:intron | 25.0% |
| !!! | GCGTTAATTGTTTTAGAAAT+TGG | + | chr1.1:49821272-49821291 | MS.gene30854:intron | 25.0% |
| !!! | GTATTACAGATTTTTTCAAC+TGG | - | chr1.1:49823539-49823558 | None:intergenic | 25.0% |
| !!! | TCTACTTTTGTTAATTTGCA+AGG | + | chr1.1:49818870-49818889 | MS.gene30854:intron | 25.0% |
| !!! | TGATATATCTGATTTGCTAT+TGG | - | chr1.1:49818911-49818930 | None:intergenic | 25.0% |
| !!! | TTGCATGACAATATTTTTTC+AGG | + | chr1.1:49821630-49821649 | MS.gene30854:intron | 25.0% |
| !!! | TTTTCTTACATCACTTTTAC+TGG | - | chr1.1:49821548-49821567 | None:intergenic | 25.0% |
| AAAACAATTAACGCATGATG+AGG | - | chr1.1:49821266-49821285 | None:intergenic | 30.0% | |
| AACTTTCTCTACTTGTTTGT+TGG | - | chr1.1:49817885-49817904 | None:intergenic | 30.0% | |
| ACAGAAACAACTTAAATGCA+TGG | + | chr1.1:49821498-49821517 | MS.gene30854:CDS | 30.0% | |
| ATAAATGTCAACCAAAGACT+CGG | - | chr1.1:49820543-49820562 | None:intergenic | 30.0% | |
| ATGATCTTCAAGAGAATTAC+AGG | + | chr1.1:49820815-49820834 | MS.gene30854:CDS | 30.0% | |
| ATTGATCTCTGTTGTGATTT+CGG | - | chr1.1:49818028-49818047 | None:intergenic | 30.0% | |
| ATTTCCAAACTACTGAAATC+AGG | + | chr1.1:49820874-49820893 | MS.gene30854:CDS | 30.0% | |
| CATGTTAATATGAACCTGTA+AGG | - | chr1.1:49819658-49819677 | None:intergenic | 30.0% | |
| CGTGATTTATAAATATAGGG+TGG | + | chr1.1:49818264-49818283 | MS.gene30854:intron | 30.0% | |
| CTTACAGGTTCATATTAACA+TGG | + | chr1.1:49819656-49819675 | MS.gene30854:intron | 30.0% | |
| GAAATTGAGAGAATGAAAGA+AGG | + | chr1.1:49820044-49820063 | MS.gene30854:CDS | 30.0% | |
| GAAATTTATTCATCAGGAGT+TGG | + | chr1.1:49821691-49821710 | MS.gene30854:CDS | 30.0% | |
| GATTTGCATACAACCATTAT+AGG | + | chr1.1:49821460-49821479 | MS.gene30854:CDS | 30.0% | |
| GTGTTTGTGCAAGAATATAT+TGG | - | chr1.1:49822998-49823017 | None:intergenic | 30.0% | |
| GTTTGCAACAATATGATTAC+AGG | + | chr1.1:49819543-49819562 | MS.gene30854:intron | 30.0% | |
| TAGTATTATAACATTGTCGG+AGG | + | chr1.1:49820271-49820290 | MS.gene30854:intron | 30.0% | |
| TCAGAAAATATACTACGTTC+CGG | + | chr1.1:49818813-49818832 | MS.gene30854:CDS | 30.0% | |
| TCATGATTTCAACTTGAGAT+AGG | - | chr1.1:49821926-49821945 | None:intergenic | 30.0% | |
| TCTCAAAATTTGTCAATTGG+TGG | - | chr1.1:49822305-49822324 | None:intergenic | 30.0% | |
| TGATTTCAGTAGTTTGGAAA+TGG | - | chr1.1:49820875-49820894 | None:intergenic | 30.0% | |
| TTCTTCACTCTTTCTTCAAT+AGG | - | chr1.1:49818450-49818469 | None:intergenic | 30.0% | |
| TTCTTTCACATAGACAGTAA+TGG | - | chr1.1:49818730-49818749 | None:intergenic | 30.0% | |
| TTCTTTGTTCTTGATATGGT+GGG | + | chr1.1:49821106-49821125 | MS.gene30854:intron | 30.0% | |
| TTTACCTGATTTCAGTAGTT+TGG | - | chr1.1:49820881-49820900 | None:intergenic | 30.0% | |
| ! | AATCTGTTTGGTAAGGTTTT+CGG | + | chr1.1:49818001-49818020 | MS.gene30854:intron | 30.0% |
| ! | AATTTTGCATCTCTCTTGAA+TGG | + | chr1.1:49821427-49821446 | MS.gene30854:CDS | 30.0% |
| ! | AGAGCAAATTACAGCAATTT+TGG | + | chr1.1:49822449-49822468 | MS.gene30854:CDS | 30.0% |
| ! | ATTTTGCATCTCTCTTGAAT+GGG | + | chr1.1:49821428-49821447 | MS.gene30854:CDS | 30.0% |
| ! | CAAACTTAATGGATCATTGT+AGG | + | chr1.1:49822155-49822174 | MS.gene30854:intron | 30.0% |
| ! | CAAATTTTTGATCCAAAGCA+TGG | - | chr1.1:49823374-49823393 | None:intergenic | 30.0% |
| ! | CAAGCTTAATCTTGTTGATT+TGG | + | chr1.1:49818785-49818804 | MS.gene30854:CDS | 30.0% |
| ! | CAATTGATGATATGCTACAA+AGG | + | chr1.1:49820902-49820921 | MS.gene30854:intron | 30.0% |
| ! | CTACTTGCTGCAAAATAAAT+TGG | - | chr1.1:49820612-49820631 | None:intergenic | 30.0% |
| ! | CTTTATCTTTGTTATCCTGA+CGG | - | chr1.1:49817647-49817666 | None:intergenic | 30.0% |
| ! | GCTAGGTTTCTTTTTACTTT+TGG | + | chr1.1:49818626-49818645 | MS.gene30854:intron | 30.0% |
| ! | GTTTTTGAATCTGTTTGGTA+AGG | + | chr1.1:49817994-49818013 | MS.gene30854:intron | 30.0% |
| ! | TGTATGACTGAATTTTCCAT+TGG | + | chr1.1:49823067-49823086 | MS.gene30854:intron | 30.0% |
| ! | TTGCAAGGTAATTTGTCATT+TGG | + | chr1.1:49818885-49818904 | MS.gene30854:intron | 30.0% |
| !! | AATTGCTGTAATTTGCTCTA+AGG | - | chr1.1:49822448-49822467 | None:intergenic | 30.0% |
| !! | ATGACATTTTTAAGGGGTAA+TGG | - | chr1.1:49819926-49819945 | None:intergenic | 30.0% |
| !! | CAAACACTTTTTGTTAAGGA+TGG | + | chr1.1:49823011-49823030 | MS.gene30854:intron | 30.0% |
| !! | TGCACAAACACTTTTTGTTA+AGG | + | chr1.1:49823007-49823026 | MS.gene30854:intron | 30.0% |
| !!! | AAACAGCCTTTGAAACTTTT+TGG | - | chr1.1:49820004-49820023 | None:intergenic | 30.0% |
| !!! | TTCTAGTTTTGTTTTGTGTC+TGG | + | chr1.1:49822864-49822883 | MS.gene30854:intron | 30.0% |
| AAAATTTGACGAACTGCTCT+CGG | - | chr1.1:49818318-49818337 | None:intergenic | 35.0% | |
| AAAGAAAGAGGACCAAAATC+AGG | - | chr1.1:49819468-49819487 | None:intergenic | 35.0% | |
| AACATCTAAGAGAACTGCTA+TGG | + | chr1.1:49822479-49822498 | MS.gene30854:CDS | 35.0% | |
| AACTGAAATAGGATCCACTT+TGG | - | chr1.1:49821571-49821590 | None:intergenic | 35.0% | |
| AACTGGTCAAATAAGCGAAA+GGG | - | chr1.1:49823522-49823541 | None:intergenic | 35.0% | |
| AACTGTAATCAATGCTCAAC+AGG | + | chr1.1:49823331-49823350 | MS.gene30854:intron | 35.0% | |
| AAGAGGACTTGAAGAAGAAT+CGG | + | chr1.1:49818512-49818531 | MS.gene30854:CDS | 35.0% | |
| AAGATCATGCAATTCATTGC+TGG | - | chr1.1:49820803-49820822 | None:intergenic | 35.0% | |
| AAGTATTATTTCAGCACGAG+TGG | + | chr1.1:49822188-49822207 | MS.gene30854:CDS | 35.0% | |
| ACATAACATCATATAACCGG+TGG | - | chr1.1:49818216-49818235 | None:intergenic | 35.0% | |
| ACCTTAATATGCATGCCATT+TGG | + | chr1.1:49819713-49819732 | MS.gene30854:intron | 35.0% | |
| AGGATATTACGAGATTCCTT+AGG | + | chr1.1:49819768-49819787 | MS.gene30854:CDS | 35.0% | |
| AGTCTAAGAAAGTAGGGTTA+GGG | + | chr1.1:49817535-49817554 | MS.gene30854:CDS | 35.0% | |
| AGTGGATCCTATTTCAGTTA+CGG | + | chr1.1:49821572-49821591 | MS.gene30854:intron | 35.0% | |
| AGTTCATTACAAGACAAGCA+TGG | + | chr1.1:49823636-49823655 | MS.gene30854:CDS | 35.0% | |
| ATATTACGAGATTCCTTAGG+AGG | + | chr1.1:49819771-49819790 | MS.gene30854:CDS | 35.0% | |
| ATTCTCCATTCAACAACAAG+AGG | + | chr1.1:49822045-49822064 | MS.gene30854:CDS | 35.0% | |
| ATTGTCAATGAAGTTCTCGA+CGG | + | chr1.1:49818070-49818089 | MS.gene30854:CDS | 35.0% | |
| CAAAGAAGAAGCTGAAAAGA+AGG | + | chr1.1:49820205-49820224 | MS.gene30854:CDS | 35.0% | |
| CAATTTCCTTCTTGTTCTCA+TGG | - | chr1.1:49823584-49823603 | None:intergenic | 35.0% | |
| CAGATCAGTCTAAGAAAGTA+GGG | + | chr1.1:49817529-49817548 | MS.gene30854:CDS | 35.0% | |
| CGAGAACTTCATTGACAATT+GGG | - | chr1.1:49818069-49818088 | None:intergenic | 35.0% | |
| CTACTTTCTTAGACTGATCT+GGG | - | chr1.1:49817530-49817549 | None:intergenic | 35.0% | |
| GAAATTGTTGAAGGACAACT+GGG | - | chr1.1:49823195-49823214 | None:intergenic | 35.0% | |
| GACTGGTAAAACTTATACGA+TGG | + | chr1.1:49818129-49818148 | MS.gene30854:CDS | 35.0% | |
| GAGAACTTCATTGACAATTG+GGG | - | chr1.1:49818068-49818087 | None:intergenic | 35.0% | |
| GATGCATGTTCTATCTTTCT+TGG | + | chr1.1:49820403-49820422 | MS.gene30854:intron | 35.0% | |
| GGCAAACCAAAAAGTTTCAA+AGG | + | chr1.1:49819995-49820014 | MS.gene30854:intron | 35.0% | |
| GGTAAAACTTATACGATGGA+GGG | + | chr1.1:49818133-49818152 | MS.gene30854:CDS | 35.0% | |
| GTGATGTAAGAAAACCAAAG+TGG | + | chr1.1:49821554-49821573 | MS.gene30854:intron | 35.0% | |
| GTTCTTGTGGAAATTGTTGA+AGG | - | chr1.1:49823204-49823223 | None:intergenic | 35.0% | |
| GTTCTTTGTTCTTGATATGG+TGG | + | chr1.1:49821105-49821124 | MS.gene30854:intron | 35.0% | |
| TAAATGTCAACCAAAGACTC+GGG | - | chr1.1:49820542-49820561 | None:intergenic | 35.0% | |
| TACTTTCTTAGACTGATCTG+GGG | - | chr1.1:49817529-49817548 | None:intergenic | 35.0% | |
| TATTACGAGATTCCTTAGGA+GGG | + | chr1.1:49819772-49819791 | MS.gene30854:CDS | 35.0% | |
| TCAAGCTTCATTGTATGCTT+TGG | + | chr1.1:49821861-49821880 | MS.gene30854:intron | 35.0% | |
| TCAGAGATAGTAAGCTTACA+AGG | + | chr1.1:49819748-49819767 | MS.gene30854:intron | 35.0% | |
| TCGAGAACTTCATTGACAAT+TGG | - | chr1.1:49818070-49818089 | None:intergenic | 35.0% | |
| TCTTCCAAACAATAAGCAGA+CGG | - | chr1.1:49819831-49819850 | None:intergenic | 35.0% | |
| TGAAATAACAGACAGCCAAA+TGG | - | chr1.1:49819731-49819750 | None:intergenic | 35.0% | |
| TGGTAAAACTTATACGATGG+AGG | + | chr1.1:49818132-49818151 | MS.gene30854:CDS | 35.0% | |
| TGTTCTTTGTTCCTGATATG+TGG | + | chr1.1:49821187-49821206 | MS.gene30854:intron | 35.0% | |
| TGTTTCAAAGTTGAAGGAGA+AGG | + | chr1.1:49820843-49820862 | MS.gene30854:CDS | 35.0% | |
| TTAAAAATGGAGCAGGAGAT+GGG | - | chr1.1:49817569-49817588 | None:intergenic | 35.0% | |
| TTCTTCCTTCAACCATAAAC+AGG | + | chr1.1:49822395-49822414 | MS.gene30854:intron | 35.0% | |
| TTCTTGCAGATCACAAAGAA+AGG | + | chr1.1:49821374-49821393 | MS.gene30854:intron | 35.0% | |
| TTTGCTCATCAAGAGAATTG+TGG | - | chr1.1:49822012-49822031 | None:intergenic | 35.0% | |
| TTTGTTGAAGGACTTGTACT+TGG | + | chr1.1:49820022-49820041 | MS.gene30854:CDS | 35.0% | |
| ! | AAAGGTAGTGTGTTGTTAAG+AGG | + | chr1.1:49818495-49818514 | MS.gene30854:CDS | 35.0% |
| ! | ACCTTTTCCATCTTCCATAA+GGG | - | chr1.1:49818481-49818500 | None:intergenic | 35.0% |
| ! | AGTATAGTATGACTGACTTC+TGG | + | chr1.1:49822544-49822563 | MS.gene30854:intron | 35.0% |
| ! | CAAGCATGGTGGAAATATAT+CGG | + | chr1.1:49823650-49823669 | MS.gene30854:CDS | 35.0% |
| ! | CTTCTGGCAAATATGCTTTT+AGG | + | chr1.1:49822560-49822579 | MS.gene30854:intron | 35.0% |
| ! | CTTCTTTTCAGCTTCTTCTT+TGG | - | chr1.1:49820207-49820226 | None:intergenic | 35.0% |
| ! | GCTAGTTGTTTCAAAGTTGA+AGG | + | chr1.1:49820837-49820856 | MS.gene30854:CDS | 35.0% |
| ! | GTTTCTTCTAGTTAGTGTCT+TGG | + | chr1.1:49823257-49823276 | MS.gene30854:intron | 35.0% |
| ! | TACCTTTTCCATCTTCCATA+AGG | - | chr1.1:49818482-49818501 | None:intergenic | 35.0% |
| ! | TGTGTCTGTGTCATTATCTA+TGG | + | chr1.1:49823392-49823411 | MS.gene30854:CDS | 35.0% |
| ! | TTCTAGAAAAAGTTGAGACG+TGG | + | chr1.1:49819272-49819291 | MS.gene30854:intron | 35.0% |
| !! | AATATGCTTTTAGGTCTCAG+AGG | + | chr1.1:49822569-49822588 | MS.gene30854:intron | 35.0% |
| !! | AGAAACAGTAATTGGTGATG+AGG | + | chr1.1:49818746-49818765 | MS.gene30854:CDS | 35.0% |
| !! | CTTAATCTTGTTGATTTGGC+TGG | + | chr1.1:49818789-49818808 | MS.gene30854:CDS | 35.0% |
| !! | CTTGGTTTTTCTCCTGATTT+TGG | + | chr1.1:49819453-49819472 | MS.gene30854:intron | 35.0% |
| !! | TACTTCCTCTTGTTGTTGAA+TGG | - | chr1.1:49822053-49822072 | None:intergenic | 35.0% |
| !! | TTAACTTGATGAACGCGTTT+TGG | + | chr1.1:49818679-49818698 | MS.gene30854:intron | 35.0% |
| !! | TTCAAAGGCTGTTTTGTTGA+AGG | + | chr1.1:49820010-49820029 | MS.gene30854:CDS | 35.0% |
| !! | TTTTAAAAGGGCCACATATC+AGG | - | chr1.1:49821201-49821220 | None:intergenic | 35.0% |
| !!! | TGTTTTAGTTTTCCCTCCTA+AGG | - | chr1.1:49819787-49819806 | None:intergenic | 35.0% |
| AAAACTTATACGATGGAGGG+TGG | + | chr1.1:49818136-49818155 | MS.gene30854:CDS | 40.0% | |
| AAACGAAAACTCACCAATCC+TGG | - | chr1.1:49822782-49822801 | None:intergenic | 40.0% | |
| AAACTTATACGATGGAGGGT+GGG | + | chr1.1:49818137-49818156 | MS.gene30854:CDS | 40.0% | |
| AAATGTCAACCAAAGACTCG+GGG | - | chr1.1:49820541-49820560 | None:intergenic | 40.0% | |
| AACAGAGCAAGAACAGAAAC+TGG | + | chr1.1:49820654-49820673 | MS.gene30854:CDS | 40.0% | |
| AACATCATATAACCGGTGGA+AGG | - | chr1.1:49818212-49818231 | None:intergenic | 40.0% | |
| AACTGCACTGTCTTTGCTTA+TGG | + | chr1.1:49818097-49818116 | MS.gene30854:CDS | 40.0% | |
| ACAGAGACCGTAACTGAAAT+AGG | - | chr1.1:49821582-49821601 | None:intergenic | 40.0% | |
| AGATCACAAAGAAAGGATGG+AGG | + | chr1.1:49821381-49821400 | MS.gene30854:intron | 40.0% | |
| ATACTTTCTGACTGAGGTTG+AGG | - | chr1.1:49820517-49820536 | None:intergenic | 40.0% | |
| ATCTATACTCTGTTGGAACG+AGG | + | chr1.1:49818552-49818571 | MS.gene30854:CDS | 40.0% | |
| CAACTGGTCAAATAAGCGAA+AGG | - | chr1.1:49823523-49823542 | None:intergenic | 40.0% | |
| CAGCTGTAAAGCTACAATAG+AGG | + | chr1.1:49822749-49822768 | MS.gene30854:CDS | 40.0% | |
| CAGTCTAAGAAAGTAGGGTT+AGG | + | chr1.1:49817534-49817553 | MS.gene30854:CDS | 40.0% | |
| CATCTTGACAAACCATGCTT+TGG | + | chr1.1:49823359-49823378 | MS.gene30854:CDS | 40.0% | |
| CATTGCTTAACAAGAGAAGC+AGG | + | chr1.1:49818601-49818620 | MS.gene30854:CDS | 40.0% | |
| CCAGATCAGTCTAAGAAAGT+AGG | + | chr1.1:49817528-49817547 | MS.gene30854:CDS | 40.0% | |
| CCTACTTTCTTAGACTGATC+TGG | - | chr1.1:49817531-49817550 | None:intergenic | 40.0% | |
| CGTGAAAGCTTCATCTGATA+TGG | + | chr1.1:49821744-49821763 | MS.gene30854:CDS | 40.0% | |
| CGTTGTTCTTCATCGCTTAA+TGG | - | chr1.1:49817794-49817813 | None:intergenic | 40.0% | |
| CTCTTCCTGTTTATGGTTGA+AGG | - | chr1.1:49822403-49822422 | None:intergenic | 40.0% | |
| CTTCAACCATAAACAGGAAG+AGG | + | chr1.1:49822401-49822420 | MS.gene30854:intron | 40.0% | |
| GAACATAAAAAAGGGCAACC+CGG | - | chr1.1:49821172-49821191 | None:intergenic | 40.0% | |
| GATGCTGTCAATCACATCAT+TGG | - | chr1.1:49821990-49822009 | None:intergenic | 40.0% | |
| GCAAGAACAGAAACTGGATT+TGG | + | chr1.1:49820660-49820679 | MS.gene30854:CDS | 40.0% | |
| GCAATGCAGTTCAAATACAG+TGG | + | chr1.1:49823142-49823161 | MS.gene30854:intron | 40.0% | |
| GCCAAATGGCATGCATATTA+AGG | - | chr1.1:49819717-49819736 | None:intergenic | 40.0% | |
| GGAAATTGTTGAAGGACAAC+TGG | - | chr1.1:49823196-49823215 | None:intergenic | 40.0% | |
| GGATTGCAAGGTGCATAAAA+TGG | + | chr1.1:49820696-49820715 | MS.gene30854:intron | 40.0% | |
| GTGGCAAGAAACTGTAAAGA+AGG | - | chr1.1:49821953-49821972 | None:intergenic | 40.0% | |
| GTTAAAAATGGAGCAGGAGA+TGG | - | chr1.1:49817570-49817589 | None:intergenic | 40.0% | |
| TACAATAGAGGATTGTCTCC+AGG | + | chr1.1:49822761-49822780 | MS.gene30854:CDS | 40.0% | |
| TAGTCCGTCTGCTTATTGTT+TGG | + | chr1.1:49819824-49819843 | MS.gene30854:CDS | 40.0% | |
| TCATTACAAGACAAGCATGG+TGG | + | chr1.1:49823639-49823658 | MS.gene30854:CDS | 40.0% | |
| TCTAAAAGGTCAAACTTGCG+AGG | + | chr1.1:49822366-49822385 | MS.gene30854:intron | 40.0% | |
| TCTCTGCAAGATTGTTCTTG+TGG | - | chr1.1:49823217-49823236 | None:intergenic | 40.0% | |
| TCTTGATGAGCAAAAACAGC+TGG | + | chr1.1:49822018-49822037 | MS.gene30854:CDS | 40.0% | |
| TGACAATTGGGGAAATTGCT+TGG | - | chr1.1:49818057-49818076 | None:intergenic | 40.0% | |
| TGCAGATCACAAAGAAAGGA+TGG | + | chr1.1:49821378-49821397 | MS.gene30854:intron | 40.0% | |
| TGCTCTACTAGCATAGTCTA+GGG | - | chr1.1:49819865-49819884 | None:intergenic | 40.0% | |
| TTCGTATGCACAAGCACAAT+AGG | - | chr1.1:49820567-49820586 | None:intergenic | 40.0% | |
| TTCTGTGACGACACAATTGT+TGG | + | chr1.1:49823605-49823624 | MS.gene30854:CDS | 40.0% | |
| TTGCTCTACTAGCATAGTCT+AGG | - | chr1.1:49819866-49819885 | None:intergenic | 40.0% | |
| TTGTCAATGAAGTTCTCGAC+GGG | + | chr1.1:49818071-49818090 | MS.gene30854:CDS | 40.0% | |
| TTTACAGTTTCTTGCCACTG+TGG | + | chr1.1:49821955-49821974 | MS.gene30854:intron | 40.0% | |
| ! | ATGGATGCTGATTATGATGC+AGG | + | chr1.1:49823411-49823430 | MS.gene30854:CDS | 40.0% |
| ! | ATGTATTTGCTAGCTCCTTC+AGG | - | chr1.1:49821720-49821739 | None:intergenic | 40.0% |
| ! | CGTATAAGTTTTACCAGTCC+CGG | - | chr1.1:49818128-49818147 | None:intergenic | 40.0% |
| ! | CTTTGTTATCCTGACGGTTA+GGG | - | chr1.1:49817641-49817660 | None:intergenic | 40.0% |
| ! | GATGAGGAGTTGATTAAGTG+TGG | + | chr1.1:49818762-49818781 | MS.gene30854:CDS | 40.0% |
| ! | GTTTTATCAACCCTTCATGC+AGG | + | chr1.1:49820457-49820476 | MS.gene30854:intron | 40.0% |
| ! | TCTTTGTTATCCTGACGGTT+AGG | - | chr1.1:49817642-49817661 | None:intergenic | 40.0% |
| ! | TGTATTTGCTAGCTCCTTCA+GGG | - | chr1.1:49821719-49821738 | None:intergenic | 40.0% |
| !! | TTCAAGTTTTGCTTCGTTGC+AGG | + | chr1.1:49817676-49817695 | MS.gene30854:CDS | 40.0% |
| !! | TTTTTAAGGGGTAATGGCAG+TGG | - | chr1.1:49819920-49819939 | None:intergenic | 40.0% |
| AAACAAGAGCTTACTCACCC+TGG | + | chr1.1:49819591-49819610 | MS.gene30854:CDS | 45.0% | |
| AACAAGAGAAGCAGGTAGCT+AGG | + | chr1.1:49818609-49818628 | MS.gene30854:intron | 45.0% | |
| AACAAGAGCTTACTCACCCT+GGG | + | chr1.1:49819592-49819611 | MS.gene30854:CDS | 45.0% | |
| AACCATAAACAGGAAGAGGC+TGG | + | chr1.1:49822405-49822424 | MS.gene30854:intron | 45.0% | |
| AATCTGCTGGCAGATGTGAA+TGG | + | chr1.1:49823441-49823460 | MS.gene30854:CDS | 45.0% | |
| ACAACGATCGAATGTTCCGA+AGG | + | chr1.1:49817808-49817827 | MS.gene30854:CDS | 45.0% | |
| ACTTCCAGGTGCACTAATGA+TGG | + | chr1.1:49823557-49823576 | MS.gene30854:intron | 45.0% | |
| ATCAACCCTTCATGCAGGAA+AGG | + | chr1.1:49820462-49820481 | MS.gene30854:intron | 45.0% | |
| ATGCGAGCTTAAGGATTGCA+AGG | + | chr1.1:49820684-49820703 | MS.gene30854:CDS | 45.0% | |
| ATTCTGCGCATGTACCTTAC+AGG | + | chr1.1:49819641-49819660 | MS.gene30854:CDS | 45.0% | |
| CAACTTGAGATAGGAGAGCA+TGG | - | chr1.1:49821917-49821936 | None:intergenic | 45.0% | |
| CAAGTGTGCAACAGTCTAAG+AGG | + | chr1.1:49822613-49822632 | MS.gene30854:CDS | 45.0% | |
| CACTCTTTCTTCAATAGGCC+TGG | - | chr1.1:49818445-49818464 | None:intergenic | 45.0% | |
| GAAGAAACCTGTAGCCCTTA+TGG | + | chr1.1:49818464-49818483 | MS.gene30854:CDS | 45.0% | |
| GAGACTCGAGACAAAGAAAG+AGG | - | chr1.1:49819480-49819499 | None:intergenic | 45.0% | |
| GATGGACCATGAGAACAAGA+AGG | + | chr1.1:49823575-49823594 | MS.gene30854:CDS | 45.0% | |
| GCCCTTATGGAAGATGGAAA+AGG | + | chr1.1:49818477-49818496 | MS.gene30854:CDS | 45.0% | |
| GCGTGCAAAGGAAATGTGTA+CGG | + | chr1.1:49820999-49821018 | MS.gene30854:CDS | 45.0% | |
| GCTCTGTTAAGTAGAGCTCA+CGG | - | chr1.1:49820642-49820661 | None:intergenic | 45.0% | |
| GTCTTTGCTTATGGACAGAC+CGG | + | chr1.1:49818106-49818125 | MS.gene30854:CDS | 45.0% | |
| TAGAGGATTGTCTCCAGGAT+TGG | + | chr1.1:49822766-49822785 | MS.gene30854:CDS | 45.0% | |
| TCACTCCTTTCCTGCATGAA+GGG | - | chr1.1:49820470-49820489 | None:intergenic | 45.0% | |
| TCATTACACGACACCACCTT+CGG | - | chr1.1:49817827-49817846 | None:intergenic | 45.0% | |
| TCTTTGCTTATGGACAGACC+GGG | + | chr1.1:49818107-49818126 | MS.gene30854:CDS | 45.0% | |
| TGAAGAAGACGGACAAGAAC+AGG | - | chr1.1:49822807-49822826 | None:intergenic | 45.0% | |
| TTCCAGCCTCTTCCTGTTTA+TGG | - | chr1.1:49822410-49822429 | None:intergenic | 45.0% | |
| TTCCATTGGCATTGCTTGCT+TGG | + | chr1.1:49823081-49823100 | MS.gene30854:intron | 45.0% | |
| TTCCTTTGCACGCTCAATCA+AGG | - | chr1.1:49820992-49821011 | None:intergenic | 45.0% | |
| TTGGTGCAGTCGTTCACATT+CGG | + | chr1.1:49818698-49818717 | MS.gene30854:intron | 45.0% | |
| ! | ATTGGCTTCAAGAACCACAG+TGG | - | chr1.1:49821972-49821991 | None:intergenic | 45.0% |
| ! | CGAGGTGTTAAAAATGGAGC+AGG | - | chr1.1:49817576-49817595 | None:intergenic | 45.0% |
| ! | GGATTTGGAATGCGAGCTTA+AGG | + | chr1.1:49820675-49820694 | MS.gene30854:CDS | 45.0% |
| ! | TCGGGTCGAGGTGTTAAAAA+TGG | - | chr1.1:49817582-49817601 | None:intergenic | 45.0% |
| !! | CAAATACAGTGGACTGTTCC+AGG | + | chr1.1:49823153-49823172 | MS.gene30854:CDS | 45.0% |
| !! | GAAAGTATTCCCCGAGTCTT+TGG | + | chr1.1:49820529-49820548 | MS.gene30854:intron | 45.0% |
| !!! | TAATTTAATTTTCTAATTTT+AGG | + | chr1.1:49817768-49817787 | MS.gene30854:intron | 5.0% |
| ACGATCGAATGTTCCGAAGG+TGG | + | chr1.1:49817811-49817830 | MS.gene30854:CDS | 50.0% | |
| ACGTGTGATAAATGCGCTCG+TGG | + | chr1.1:49819615-49819634 | MS.gene30854:CDS | 50.0% | |
| CACCAAGCAAGCAATGCCAA+TGG | - | chr1.1:49823086-49823105 | None:intergenic | 50.0% | |
| CCATCTTCCATAAGGGCTAC+AGG | - | chr1.1:49818474-49818493 | None:intergenic | 50.0% | |
| CCTGTAGCCCTTATGGAAGA+TGG | + | chr1.1:49818471-49818490 | MS.gene30854:CDS | 50.0% | |
| CGACTCACATTTCCTTCCAC+CGG | + | chr1.1:49818197-49818216 | MS.gene30854:intron | 50.0% | |
| CGCATTTATCACACGTCCCA+GGG | - | chr1.1:49819611-49819630 | None:intergenic | 50.0% | |
| CGGGGAATACTTTCTGACTG+AGG | - | chr1.1:49820523-49820542 | None:intergenic | 50.0% | |
| CTCACTCCTTTCCTGCATGA+AGG | - | chr1.1:49820471-49820490 | None:intergenic | 50.0% | |
| CTCCAGAAGACAGTTCTACC+AGG | + | chr1.1:49818424-49818443 | MS.gene30854:CDS | 50.0% | |
| GGAGGGTGGGATGAGAAATA+AGG | + | chr1.1:49818150-49818169 | MS.gene30854:CDS | 50.0% | |
| GGGTGGTGATTTAACTGCTG+AGG | + | chr1.1:49818281-49818300 | MS.gene30854:intron | 50.0% | |
| GGTGATTTAACTGCTGAGGC+TGG | + | chr1.1:49818285-49818304 | MS.gene30854:CDS | 50.0% | |
| TGCAGGAACACACAATCTGC+TGG | + | chr1.1:49823428-49823447 | MS.gene30854:CDS | 50.0% | |
| TGCCTTGATTGAGCGTGCAA+AGG | + | chr1.1:49820987-49821006 | MS.gene30854:CDS | 50.0% | |
| TGGTCCATCATTAGTGCACC+TGG | - | chr1.1:49823564-49823583 | None:intergenic | 50.0% | |
| TTCAGCACGAGTGGTTTCAG+AGG | + | chr1.1:49822197-49822216 | MS.gene30854:CDS | 50.0% | |
| ! | TGCTTTTACCTCACGTGCTC+CGG | - | chr1.1:49818835-49818854 | None:intergenic | 50.0% |
| !! | AGAGGCGTCAAGGAATATGC+AGG | + | chr1.1:49822587-49822606 | MS.gene30854:CDS | 50.0% |
| !! | TGGAACGAGGAGCATCAAAG+AGG | + | chr1.1:49818565-49818584 | MS.gene30854:CDS | 50.0% |
| !! | TTTAGGTCTCAGAGGCGTCA+AGG | + | chr1.1:49822577-49822596 | MS.gene30854:intron | 50.0% |
| !! | TTTTCAGGCAGCACATGCTC+TGG | + | chr1.1:49821645-49821664 | MS.gene30854:intron | 50.0% |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr1.1:49821146-49821165 | None:intergenic | 55.0% | |
| AGAGGCTGGAAGAGATGAGG+AGG | + | chr1.1:49822419-49822438 | MS.gene30854:CDS | 55.0% | |
| ATCAGGAGTTGGGACCCTGA+AGG | + | chr1.1:49821702-49821721 | MS.gene30854:CDS | 55.0% | |
| ATGCAGATGTACGAGCAGCG+AGG | + | chr1.1:49820144-49820163 | MS.gene30854:intron | 55.0% | |
| CCGATCAGAGCCTCGTGAAT+CGG | - | chr1.1:49817616-49817635 | None:intergenic | 55.0% | |
| CGAGCAGCGAGGGAAAAGAA+TGG | + | chr1.1:49820155-49820174 | MS.gene30854:CDS | 55.0% | |
| CGATCAGAGCCTCGTGAATC+GGG | - | chr1.1:49817615-49817634 | None:intergenic | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr1.1:49821145-49821164 | None:intergenic | 55.0% | |
| GCGCATTTATCACACGTCCC+AGG | - | chr1.1:49819612-49819631 | None:intergenic | 55.0% | |
| GGAAGAGGCTGGAAGAGATG+AGG | + | chr1.1:49822416-49822435 | MS.gene30854:intron | 55.0% | |
| GGACTGTTCCAGGAAGCAGT+GGG | + | chr1.1:49823163-49823182 | MS.gene30854:CDS | 55.0% | |
| GGCCTGGTAGAACTGTCTTC+TGG | - | chr1.1:49818429-49818448 | None:intergenic | 55.0% | |
| TCTCCCCTGCTTCTCTAGCA+CGG | - | chr1.1:49819570-49819589 | None:intergenic | 55.0% | |
| TGATCGGAACCCTAACCGTC+AGG | + | chr1.1:49817629-49817648 | MS.gene30854:CDS | 55.0% | |
| TGCAGATGTACGAGCAGCGA+GGG | + | chr1.1:49820145-49820164 | MS.gene30854:intron | 55.0% | |
| TGGACTGTTCCAGGAAGCAG+TGG | + | chr1.1:49823162-49823181 | MS.gene30854:CDS | 55.0% | |
| TGGCAGTGGTAACTGACCTC+AGG | - | chr1.1:49819906-49819925 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr1.1:49821150-49821169 | MS.gene30854:intron | 55.0% |
| ! | CCGATTCACGAGGCTCTGAT+CGG | + | chr1.1:49817613-49817632 | MS.gene30854:CDS | 55.0% |
| !! | CAGCACATGCTCTGGAAGCA+AGG | + | chr1.1:49821653-49821672 | MS.gene30854:CDS | 55.0% |
| ACTACGTTCCGGAGCACGTG+AGG | + | chr1.1:49818824-49818843 | MS.gene30854:CDS | 60.0% | |
| AGCCTCGTGAATCGGGACGA+CGG | - | chr1.1:49817608-49817627 | None:intergenic | 60.0% | |
| AGGGCCGTGCTAGAGAAGCA+GGG | + | chr1.1:49819563-49819582 | MS.gene30854:intron | 60.0% | |
| GCTTATGGACAGACCGGGAC+TGG | + | chr1.1:49818112-49818131 | MS.gene30854:CDS | 60.0% | |
| GGCACTTTCCCACTGCTTCC+TGG | - | chr1.1:49823174-49823193 | None:intergenic | 60.0% | |
| TGAATCGGGACGACGGCGTT+CGG | - | chr1.1:49817601-49817620 | None:intergenic | 60.0% | |
| ! | GATATGGTGGGACCCCTTCG+CGG | + | chr1.1:49821118-49821137 | MS.gene30854:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr1.1:49821151-49821170 | MS.gene30854:intron | 60.0% |
| CAGGGCCGTGCTAGAGAAGC+AGG | + | chr1.1:49819562-49819581 | MS.gene30854:intron | 65.0% | |
| CATACGCAGGGTCCGCGAAG+GGG | - | chr1.1:49821133-49821152 | None:intergenic | 65.0% | |
| CTTCGCGGACCCTGCGTATG+CGG | + | chr1.1:49821133-49821152 | MS.gene30854:intron | 65.0% | |
| GAATCGGGACGACGGCGTTC+GGG | - | chr1.1:49817600-49817619 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGCGAA+GGG | - | chr1.1:49821134-49821153 | None:intergenic | 65.0% | |
| GGGCCGTGCTAGAGAAGCAG+GGG | + | chr1.1:49819564-49819583 | MS.gene30854:intron | 65.0% | |
| TTCGCGGACCCTGCGTATGC+GGG | + | chr1.1:49821134-49821153 | MS.gene30854:intron | 65.0% | |
| CGCATACGCAGGGTCCGCGA+AGG | - | chr1.1:49821135-49821154 | None:intergenic | 70.0% | |
| CGCCGTCGTCCCGATTCACG+AGG | + | chr1.1:49817603-49817622 | MS.gene30854:CDS | 70.0% | |
| GGACGACGGCGTTCGGGTCG+AGG | - | chr1.1:49817594-49817613 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 49817491 | 49823716 | 49817491 | ID=MS.gene30854 |
| chr1.1 | mRNA | 49817491 | 49823716 | 49817491 | ID=MS.gene30854.t1;Parent=MS.gene30854 |
| chr1.1 | exon | 49817491 | 49817697 | 49817491 | ID=MS.gene30854.t1.exon1;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49817491 | 49817697 | 49817491 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49817790 | 49817919 | 49817790 | ID=MS.gene30854.t1.exon2;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49817790 | 49817919 | 49817790 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49818016 | 49818171 | 49818016 | ID=MS.gene30854.t1.exon3;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49818016 | 49818171 | 49818016 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49818282 | 49818622 | 49818282 | ID=MS.gene30854.t1.exon4;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49818282 | 49818622 | 49818282 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49818707 | 49818845 | 49818707 | ID=MS.gene30854.t1.exon5;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49818707 | 49818845 | 49818707 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49819565 | 49819662 | 49819565 | ID=MS.gene30854.t1.exon6;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49819565 | 49819662 | 49819565 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49819752 | 49819908 | 49819752 | ID=MS.gene30854.t1.exon7;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49819752 | 49819908 | 49819752 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49819996 | 49820065 | 49819996 | ID=MS.gene30854.t1.exon8;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49819996 | 49820065 | 49819996 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49820150 | 49820226 | 49820150 | ID=MS.gene30854.t1.exon9;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49820150 | 49820226 | 49820150 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49820479 | 49820532 | 49820479 | ID=MS.gene30854.t1.exon10;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49820479 | 49820532 | 49820479 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49820625 | 49820705 | 49820625 | ID=MS.gene30854.t1.exon11;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49820625 | 49820705 | 49820625 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49820784 | 49820895 | 49820784 | ID=MS.gene30854.t1.exon12;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49820784 | 49820895 | 49820784 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49820983 | 49821069 | 49820983 | ID=MS.gene30854.t1.exon13;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49820983 | 49821069 | 49820983 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49821383 | 49821558 | 49821383 | ID=MS.gene30854.t1.exon14;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49821383 | 49821558 | 49821383 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49821652 | 49821813 | 49821652 | ID=MS.gene30854.t1.exon15;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49821652 | 49821813 | 49821652 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49821962 | 49822069 | 49821962 | ID=MS.gene30854.t1.exon16;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49821962 | 49822069 | 49821962 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49822177 | 49822335 | 49822177 | ID=MS.gene30854.t1.exon17;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49822177 | 49822335 | 49822177 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49822417 | 49822500 | 49822417 | ID=MS.gene30854.t1.exon18;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49822417 | 49822500 | 49822417 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49822582 | 49822787 | 49822582 | ID=MS.gene30854.t1.exon19;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49822582 | 49822787 | 49822582 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49823151 | 49823252 | 49823151 | ID=MS.gene30854.t1.exon20;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49823151 | 49823252 | 49823151 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49823353 | 49823462 | 49823353 | ID=MS.gene30854.t1.exon21;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49823353 | 49823462 | 49823353 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| chr1.1 | exon | 49823565 | 49823716 | 49823565 | ID=MS.gene30854.t1.exon22;Parent=MS.gene30854.t1 |
| chr1.1 | CDS | 49823565 | 49823716 | 49823565 | ID=cds.MS.gene30854.t1;Parent=MS.gene30854.t1 |
| Gene Sequence |
| Protein sequence |
