Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31207.t1 | AES67542.2 | 98.3 | 287 | 3 | 1 | 1 | 287 | 1 | 285 | 1.80E-155 | 558.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31207.t1 | O48963 | 58.6 | 321 | 94 | 6 | 6 | 287 | 5 | 325 | 6.5e-90 | 332.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31207.t1 | A0A072VCV1 | 98.3 | 287 | 3 | 1 | 1 | 287 | 1 | 285 | 1.3e-155 | 558.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene31207 | 0.872606 | 2.79E-67 | -1.69E-46 |
| MS.gene049369 | MS.gene31207 | 0.859626 | 3.63E-63 | -1.69E-46 |
| MS.gene049907 | MS.gene31207 | 0.814754 | 1.31E-51 | -1.69E-46 |
| MS.gene050122 | MS.gene31207 | 0.811515 | 6.74E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene31207 | 0.839302 | 1.72E-57 | -1.69E-46 |
| MS.gene05105 | MS.gene31207 | 0.804769 | 1.84E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene31207 | 0.810869 | 9.30E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene31207 | 0.85382 | 1.86E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene31207 | 0.828651 | 7.98E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene31207 | 0.826042 | 3.37E-54 | -1.69E-46 |
| MS.gene05316 | MS.gene31207 | 0.836737 | 7.85E-57 | -1.69E-46 |
| MS.gene053758 | MS.gene31207 | 0.81093 | 9.02E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene31207 | 0.860178 | 2.48E-63 | -1.69E-46 |
| MS.gene053912 | MS.gene31207 | 0.80173 | 7.85E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene31207 | 0.821888 | 3.18E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene31207 | 0.812272 | 4.61E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene31207 | 0.830306 | 3.16E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene31207 | 0.805244 | 1.47E-49 | -1.69E-46 |
| MS.gene055802 | MS.gene31207 | 0.821224 | 4.52E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene31207 | 0.816945 | 4.26E-52 | -1.69E-46 |
| MS.gene055911 | MS.gene31207 | 0.81985 | 9.35E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene31207 | 0.815484 | 9.03E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene31207 | 0.815786 | 7.73E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene31207 | 0.808089 | 3.68E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene31207 | 0.803011 | 4.27E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene31207 | 0.811675 | 6.22E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene31207 | 0.848801 | 4.86E-60 | -1.69E-46 |
| MS.gene057449 | MS.gene31207 | 0.847499 | 1.11E-59 | -1.69E-46 |
| MS.gene057450 | MS.gene31207 | 0.844793 | 6.07E-59 | -1.69E-46 |
| MS.gene057537 | MS.gene31207 | 0.845055 | 5.16E-59 | -1.69E-46 |
| MS.gene057749 | MS.gene31207 | 0.826361 | 2.83E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene31207 | 0.827539 | 1.48E-54 | -1.69E-46 |
| MS.gene057927 | MS.gene31207 | 0.82524 | 5.22E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene31207 | 0.806412 | 8.33E-50 | -1.69E-46 |
| MS.gene058075 | MS.gene31207 | 0.834528 | 2.85E-56 | -1.69E-46 |
| MS.gene058365 | MS.gene31207 | 0.809028 | 2.32E-50 | -1.69E-46 |
| MS.gene058459 | MS.gene31207 | 0.827851 | 1.25E-54 | -1.69E-46 |
| MS.gene05858 | MS.gene31207 | 0.825324 | 4.99E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene31207 | 0.833453 | 5.29E-56 | -1.69E-46 |
| MS.gene058949 | MS.gene31207 | 0.868599 | 5.79E-66 | -1.69E-46 |
| MS.gene059366 | MS.gene31207 | 0.832125 | 1.13E-55 | -1.69E-46 |
| MS.gene059674 | MS.gene31207 | 0.860772 | 1.64E-63 | -1.69E-46 |
| MS.gene059688 | MS.gene31207 | 0.844461 | 7.46E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene31207 | 0.838569 | 2.66E-57 | -1.69E-46 |
| MS.gene059695 | MS.gene31207 | 0.840255 | 9.71E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene31207 | 0.847177 | 1.36E-59 | -1.69E-46 |
| MS.gene059807 | MS.gene31207 | 0.872535 | 2.95E-67 | -1.69E-46 |
| MS.gene05986 | MS.gene31207 | 0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene059876 | MS.gene31207 | 0.813455 | 2.54E-51 | -1.69E-46 |
| MS.gene059974 | MS.gene31207 | 0.807151 | 5.81E-50 | -1.69E-46 |
| MS.gene060005 | MS.gene31207 | 0.810126 | 1.35E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene31207 | 0.822002 | 2.99E-53 | -1.69E-46 |
| MS.gene060495 | MS.gene31207 | 0.856569 | 2.94E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene31207 | 0.824291 | 8.74E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene31207 | 0.804929 | 1.71E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene31207 | -0.819953 | 8.86E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31207.t1 | MTR_2g095980 | 97.917 | 288 | 4 | 1 | 1 | 288 | 1 | 286 | 0.0 | 583 |
| MS.gene31207.t1 | MTR_2g095980 | 41.176 | 119 | 70 | 0 | 149 | 267 | 430 | 548 | 3.11e-28 | 114 |
| MS.gene31207.t1 | MTR_2g095980 | 97.917 | 288 | 4 | 1 | 1 | 288 | 1 | 286 | 0.0 | 582 |
| MS.gene31207.t1 | MTR_2g095980 | 41.176 | 119 | 70 | 0 | 149 | 267 | 430 | 548 | 3.08e-28 | 114 |
| MS.gene31207.t1 | MTR_4g061610 | 68.276 | 290 | 67 | 7 | 17 | 288 | 11 | 293 | 5.74e-123 | 374 |
| MS.gene31207.t1 | MTR_4g061610 | 41.176 | 119 | 70 | 0 | 149 | 267 | 448 | 566 | 1.36e-28 | 115 |
| MS.gene31207.t1 | MTR_8g070530 | 61.972 | 213 | 74 | 3 | 79 | 288 | 48 | 256 | 6.66e-80 | 259 |
| MS.gene31207.t1 | MTR_8g070530 | 40.336 | 119 | 71 | 0 | 149 | 267 | 401 | 519 | 6.01e-27 | 110 |
| MS.gene31207.t1 | MTR_2g095980 | 41.176 | 119 | 70 | 0 | 149 | 267 | 175 | 293 | 2.97e-28 | 114 |
| MS.gene31207.t1 | MTR_2g095980 | 96.774 | 31 | 1 | 0 | 258 | 288 | 1 | 31 | 7.40e-12 | 65.9 |
| MS.gene31207.t1 | MTR_5g038420 | 46.667 | 105 | 56 | 0 | 157 | 261 | 249 | 353 | 1.11e-27 | 110 |
| MS.gene31207.t1 | MTR_5g038420 | 42.353 | 85 | 49 | 0 | 161 | 245 | 29 | 113 | 1.06e-17 | 82.8 |
| MS.gene31207.t1 | MTR_5g038420 | 46.226 | 106 | 57 | 0 | 158 | 263 | 250 | 355 | 3.58e-26 | 107 |
| MS.gene31207.t1 | MTR_5g038420 | 42.353 | 85 | 49 | 0 | 161 | 245 | 29 | 113 | 2.51e-17 | 82.0 |
| MS.gene31207.t1 | MTR_5g038420 | 48.936 | 94 | 48 | 0 | 157 | 250 | 249 | 342 | 1.79e-25 | 103 |
| MS.gene31207.t1 | MTR_5g038420 | 42.353 | 85 | 49 | 0 | 161 | 245 | 29 | 113 | 7.20e-18 | 82.8 |
| MS.gene31207.t1 | MTR_8g105590 | 46.364 | 110 | 50 | 1 | 160 | 260 | 63 | 172 | 3.10e-24 | 102 |
| MS.gene31207.t1 | MTR_2g036510 | 40.187 | 107 | 55 | 1 | 161 | 258 | 42 | 148 | 1.18e-20 | 92.0 |
| MS.gene31207.t1 | MTR_5g038420 | 42.353 | 85 | 49 | 0 | 161 | 245 | 29 | 113 | 4.90e-18 | 82.8 |
| MS.gene31207.t1 | MTR_5g038420 | 53.061 | 49 | 23 | 0 | 157 | 205 | 249 | 297 | 5.04e-11 | 62.8 |
| MS.gene31207.t1 | MTR_5g038420 | 42.353 | 85 | 49 | 0 | 161 | 245 | 29 | 113 | 5.03e-18 | 82.8 |
| MS.gene31207.t1 | MTR_5g038420 | 46.875 | 64 | 34 | 0 | 157 | 220 | 249 | 312 | 5.71e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31207.t1 | AT3G45780 | 58.750 | 320 | 93 | 6 | 8 | 288 | 7 | 326 | 1.61e-113 | 350 |
| MS.gene31207.t1 | AT3G45780 | 40.336 | 119 | 71 | 0 | 149 | 267 | 465 | 583 | 6.98e-27 | 110 |
| MS.gene31207.t1 | AT3G45780 | 58.750 | 320 | 93 | 6 | 8 | 288 | 7 | 326 | 1.61e-113 | 350 |
| MS.gene31207.t1 | AT3G45780 | 40.336 | 119 | 71 | 0 | 149 | 267 | 465 | 583 | 6.98e-27 | 110 |
| MS.gene31207.t1 | AT5G58140 | 49.481 | 289 | 118 | 6 | 1 | 288 | 1 | 262 | 6.70e-78 | 250 |
| MS.gene31207.t1 | AT5G58140 | 32.984 | 191 | 126 | 1 | 79 | 267 | 307 | 497 | 1.19e-27 | 112 |
| MS.gene31207.t1 | AT5G58140 | 49.481 | 289 | 118 | 6 | 1 | 288 | 1 | 262 | 2.58e-76 | 249 |
| MS.gene31207.t1 | AT5G58140 | 32.984 | 191 | 126 | 1 | 79 | 267 | 307 | 497 | 2.09e-27 | 112 |
| MS.gene31207.t1 | AT5G58140 | 49.481 | 289 | 118 | 6 | 1 | 288 | 1 | 262 | 5.08e-76 | 249 |
| MS.gene31207.t1 | AT5G58140 | 32.984 | 191 | 126 | 1 | 79 | 267 | 307 | 497 | 2.27e-27 | 112 |
| MS.gene31207.t1 | AT5G58140 | 49.481 | 289 | 118 | 6 | 1 | 288 | 1 | 262 | 5.08e-76 | 249 |
| MS.gene31207.t1 | AT5G58140 | 32.984 | 191 | 126 | 1 | 79 | 267 | 307 | 497 | 2.27e-27 | 112 |
| MS.gene31207.t1 | AT5G58140 | 49.481 | 289 | 118 | 6 | 1 | 288 | 1 | 262 | 5.08e-76 | 249 |
| MS.gene31207.t1 | AT5G58140 | 32.984 | 191 | 126 | 1 | 79 | 267 | 307 | 497 | 2.27e-27 | 112 |
| MS.gene31207.t1 | AT5G58140 | 49.481 | 289 | 118 | 6 | 1 | 288 | 1 | 262 | 5.08e-76 | 249 |
| MS.gene31207.t1 | AT5G58140 | 32.984 | 191 | 126 | 1 | 79 | 267 | 307 | 497 | 2.27e-27 | 112 |
| MS.gene31207.t1 | AT5G58140 | 49.481 | 289 | 118 | 6 | 1 | 288 | 1 | 262 | 5.08e-76 | 249 |
| MS.gene31207.t1 | AT5G58140 | 32.984 | 191 | 126 | 1 | 79 | 267 | 307 | 497 | 2.27e-27 | 112 |
| MS.gene31207.t1 | AT2G02710 | 39.706 | 136 | 80 | 1 | 141 | 276 | 241 | 374 | 8.41e-30 | 116 |
| MS.gene31207.t1 | AT2G02710 | 40.000 | 115 | 68 | 1 | 150 | 263 | 28 | 142 | 1.70e-22 | 96.7 |
| MS.gene31207.t1 | AT2G02710 | 39.130 | 138 | 80 | 2 | 141 | 276 | 241 | 376 | 5.36e-28 | 111 |
| MS.gene31207.t1 | AT2G02710 | 40.000 | 115 | 68 | 1 | 150 | 263 | 28 | 142 | 1.73e-22 | 96.7 |
| MS.gene31207.t1 | AT1G68050 | 46.364 | 110 | 50 | 1 | 160 | 260 | 55 | 164 | 5.44e-26 | 107 |
| MS.gene31207.t1 | AT2G02710 | 42.105 | 114 | 64 | 1 | 141 | 252 | 241 | 354 | 1.05e-25 | 104 |
| MS.gene31207.t1 | AT2G02710 | 40.000 | 115 | 68 | 1 | 150 | 263 | 28 | 142 | 1.13e-22 | 96.7 |
| MS.gene31207.t1 | AT2G02710 | 40.000 | 115 | 68 | 1 | 150 | 263 | 28 | 142 | 9.30e-23 | 95.9 |
| MS.gene31207.t1 | AT2G02710 | 40.789 | 76 | 45 | 0 | 141 | 216 | 241 | 316 | 1.13e-13 | 70.5 |
| MS.gene31207.t1 | AT2G18915 | 39.535 | 129 | 68 | 2 | 161 | 280 | 47 | 174 | 1.11e-21 | 95.1 |
| MS.gene31207.t1 | AT5G57360 | 36.641 | 131 | 69 | 2 | 137 | 258 | 28 | 153 | 1.47e-19 | 89.0 |
| MS.gene31207.t1 | AT5G57360 | 33.758 | 157 | 73 | 3 | 111 | 258 | 19 | 153 | 1.49e-19 | 89.0 |
| MS.gene31207.t1 | AT2G18915 | 36.667 | 120 | 74 | 2 | 161 | 280 | 47 | 164 | 5.31e-16 | 78.6 |
Find 94 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAACTCTGGCAGAGTTTC+CGG | 0.217366 | 2.1:-7658576 | MS.gene31207:CDS |
| GGCAATGTGCTCAAGTTAAT+TGG | 0.247139 | 2.1:-7657870 | MS.gene31207:CDS |
| CTTATCTTTGCCACGTCTTC+AGG | 0.250056 | 2.1:+7658002 | None:intergenic |
| TCCCACTCCTTGTGGTTTCC+CGG | 0.270958 | 2.1:+7658656 | None:intergenic |
| TCAACAAACTTTCGTGGTTT+CGG | 0.309777 | 2.1:-7658478 | MS.gene31207:CDS |
| AGAAGGATGGAACTCCATTC+TGG | 0.318494 | 2.1:-7657929 | MS.gene31207:CDS |
| TGCTCTCTGTGCCGCGGCGC+CGG | 0.321129 | 2.1:+7658716 | None:intergenic |
| TGCATACATAATCGGGTAAT+CGG | 0.321776 | 2.1:+7658443 | None:intergenic |
| CCTGCACTTGCATACATAAT+CGG | 0.326867 | 2.1:+7658435 | None:intergenic |
| TCATATCGAATCAAGGATTC+AGG | 0.371876 | 2.1:+7656178 | None:intergenic |
| CTCAGAACAGACGCTGAAAC+CGG | 0.376841 | 2.1:-7658675 | MS.gene31207:CDS |
| ATGAAGTCACCAACACTTCA+TGG | 0.386276 | 2.1:-7658761 | MS.gene31207:CDS |
| TTCAAATCCTCCGAAACTCT+TGG | 0.389814 | 2.1:+7658519 | None:intergenic |
| ACGCGGGTTTCCAAGAGTTT+CGG | 0.390873 | 2.1:-7658529 | MS.gene31207:CDS |
| GAGAGCAGCCGAGTGGGGTT+TGG | 0.401355 | 2.1:-7658700 | MS.gene31207:CDS |
| CACTTCATGGATGGCAATCA+AGG | 0.403055 | 2.1:-7658748 | MS.gene31207:CDS |
| AAGAAGTCATAGGAAGAAAC+TGG | 0.423723 | 2.1:-7658383 | MS.gene31207:intron |
| CATAATCGGGTAATCGGGTT+TGG | 0.439804 | 2.1:+7658449 | None:intergenic |
| CTGAAGACGTGGCAAAGATA+AGG | 0.443688 | 2.1:-7658001 | MS.gene31207:CDS |
| TCCATTCTGTTCATCGTCAC+CGG | 0.456704 | 2.1:+7658623 | None:intergenic |
| ATTGCCATCATCATCCTTGA+TGG | 0.459706 | 2.1:+7657887 | None:intergenic |
| GGTGAAGTTGAGTTGCTTGT+TGG | 0.459968 | 2.1:+7658861 | None:intergenic |
| GCAATGTGCTCAAGTTAATT+GGG | 0.462004 | 2.1:-7657869 | MS.gene31207:intron |
| TATACTTCAAAAGAAGTCAT+AGG | 0.464110 | 2.1:-7658393 | MS.gene31207:CDS |
| CCGATTATGTATGCAAGTGC+AGG | 0.470820 | 2.1:-7658435 | MS.gene31207:CDS |
| GCATACATAATCGGGTAATC+GGG | 0.476217 | 2.1:+7658444 | None:intergenic |
| TGAAGACGTGGCAAAGATAA+GGG | 0.478455 | 2.1:-7658000 | MS.gene31207:CDS |
| CACACTCACACCTGAAAACA+TGG | 0.483295 | 2.1:-7658824 | MS.gene31207:CDS |
| CTGCACTTGCATACATAATC+GGG | 0.483989 | 2.1:+7658436 | None:intergenic |
| CGAGGATCCCTCGGAAATGA+TGG | 0.487926 | 2.1:+7658906 | None:intergenic |
| TCTCACTATTTCACCCATCA+AGG | 0.490552 | 2.1:-7657901 | MS.gene31207:CDS |
| GCAGGTTTCTTCAACATGAC+GGG | 0.495681 | 2.1:-7658417 | MS.gene31207:CDS |
| GCAATCAAGGAAGGAGAAAC+CGG | 0.495765 | 2.1:-7658735 | MS.gene31207:CDS |
| ATGGAAAGTTCTCCGGCAAA+AGG | 0.497594 | 2.1:-7658605 | MS.gene31207:CDS |
| AAGGATTCAGGCAACCCATT+GGG | 0.499553 | 2.1:+7656190 | None:intergenic |
| TAAGGGAAGCATTAGAAGGT+GGG | 0.503095 | 2.1:-7657983 | MS.gene31207:CDS |
| AAGATAAGGGAAGCATTAGA+AGG | 0.506363 | 2.1:-7657987 | MS.gene31207:CDS |
| CAAGCATACGGAAGGGTCAA+AGG | 0.512879 | 2.1:-7656227 | MS.gene31207:CDS |
| AGAAGAATTTACGTCCCAAT+GGG | 0.514050 | 2.1:-7656204 | MS.gene31207:CDS |
| AAAAGGAATTCTAATAACTC+TGG | 0.516172 | 2.1:-7658588 | MS.gene31207:CDS |
| TTTCTAACTCCCACTCCTTG+TGG | 0.526938 | 2.1:+7658648 | None:intergenic |
| CATACCATCATATCGAATCA+AGG | 0.530527 | 2.1:+7656171 | None:intergenic |
| GAATCCTTGATTCGATATGA+TGG | 0.531200 | 2.1:-7656175 | MS.gene31207:CDS |
| CTTGATTCGATATGATGGTA+TGG | 0.531275 | 2.1:-7656170 | None:intergenic |
| CCTGAAAACATGGACAGAAA+CGG | 0.538440 | 2.1:-7658814 | MS.gene31207:CDS |
| GAACAGAATGGAAAGTTCTC+CGG | 0.541170 | 2.1:-7658612 | MS.gene31207:CDS |
| TTGTTGGATTGAATACTTCG+AGG | 0.544699 | 2.1:+7658877 | None:intergenic |
| GGCACAGAGAGCAGCCGAGT+GGG | 0.549650 | 2.1:-7658706 | MS.gene31207:CDS |
| GAAGGTGGGAAAAGTTATTG+TGG | 0.550813 | 2.1:-7657969 | MS.gene31207:CDS |
| CGGGTTTCCAAGAGTTTCGG+AGG | 0.554496 | 2.1:-7658526 | MS.gene31207:CDS |
| CAAGGATTCAGGCAACCCAT+TGG | 0.554877 | 2.1:+7656189 | None:intergenic |
| TCACCCATCAAGGATGATGA+TGG | 0.556770 | 2.1:-7657891 | MS.gene31207:CDS |
| TGCAGGTTTCTTCAACATGA+CGG | 0.557914 | 2.1:-7658418 | MS.gene31207:CDS |
| GTGGGAAAAGTTATTGTGGA+AGG | 0.562063 | 2.1:-7657965 | MS.gene31207:CDS |
| TGTTGGATTGAATACTTCGA+GGG | 0.564410 | 2.1:+7658878 | None:intergenic |
| TTACTGAATTACAAGAAGGA+TGG | 0.565513 | 2.1:-7657942 | MS.gene31207:CDS |
| ATAAGGGAAGCATTAGAAGG+TGG | 0.565911 | 2.1:-7657984 | MS.gene31207:CDS |
| GAGAAGAATTTACGTCCCAA+TGG | 0.567462 | 2.1:-7656205 | MS.gene31207:CDS |
| CTGACGGCGGTGATCCACGC+GGG | 0.572568 | 2.1:-7658545 | MS.gene31207:CDS |
| AGGGATCCTCGAGGATCCCT+CGG | 0.573765 | 2.1:+7658897 | None:intergenic |
| TCAGAACAGACGCTGAAACC+GGG | 0.578722 | 2.1:-7658674 | MS.gene31207:CDS |
| TCCGGTGACGATGAACAGAA+TGG | 0.582218 | 2.1:-7658624 | MS.gene31207:CDS |
| AGTGTTGGTGACTTCATCGC+TGG | 0.594943 | 2.1:+7658767 | None:intergenic |
| AACAAGCAACTCAACTTCAC+CGG | 0.596639 | 2.1:-7658859 | MS.gene31207:CDS |
| CTCGGCTGCTCTCTGTGCCG+CGG | 0.596930 | 2.1:+7658710 | None:intergenic |
| TTGCCATCATCATCCTTGAT+GGG | 0.598307 | 2.1:+7657888 | None:intergenic |
| TCATGGATGGCAATCAAGGA+AGG | 0.600999 | 2.1:-7658744 | MS.gene31207:CDS |
| GAAGTTAACAAGCATACGGA+AGG | 0.601063 | 2.1:-7656235 | MS.gene31207:CDS |
| GGTGGAAGTTAACAAGCATA+CGG | 0.601427 | 2.1:-7656239 | MS.gene31207:CDS |
| ACCGCCGTCAGAAGAGTCAC+CGG | 0.604229 | 2.1:+7658557 | None:intergenic |
| GATTGCCATCCATGAAGTGT+TGG | 0.607024 | 2.1:+7658752 | None:intergenic |
| AAGGTTACTGAATTACAAGA+AGG | 0.607960 | 2.1:-7657946 | MS.gene31207:CDS |
| CACAAAGACCATCATTTCCG+AGG | 0.610511 | 2.1:-7658914 | MS.gene31207:CDS |
| AACCGGGAAACCACAAGGAG+TGG | 0.616718 | 2.1:-7658658 | MS.gene31207:CDS |
| GGAGTGGGAGTTAGAAACTC+CGG | 0.618718 | 2.1:-7658642 | MS.gene31207:CDS |
| GGAAGGAGAAACCGGCGCCG+CGG | 0.624207 | 2.1:-7658727 | MS.gene31207:CDS |
| AGTCACCAACACTTCATGGA+TGG | 0.626274 | 2.1:-7658757 | MS.gene31207:CDS |
| ACCGGGAAACCACAAGGAGT+GGG | 0.634059 | 2.1:-7658657 | MS.gene31207:CDS |
| ATAGTGAGAAGATTCCAGAA+TGG | 0.635201 | 2.1:+7657915 | None:intergenic |
| TCTGAGCACCAAACCCCACT+CGG | 0.636849 | 2.1:+7658692 | None:intergenic |
| ACAAAGACCATCATTTCCGA+GGG | 0.642926 | 2.1:-7658913 | MS.gene31207:CDS |
| TCCGGTGACTCTTCTGACGG+CGG | 0.644875 | 2.1:-7658558 | MS.gene31207:CDS |
| GGTCTTTGTGATGAAGATGA+TGG | 0.645005 | 2.1:+7658927 | None:intergenic |
| GCACAGAGAGCAGCCGAGTG+GGG | 0.647937 | 2.1:-7658705 | MS.gene31207:CDS |
| GAGTGTGACGGAGAACGTAC+CGG | 0.656780 | 2.1:+7658840 | None:intergenic |
| GTTTCCGGTGACTCTTCTGA+CGG | 0.659575 | 2.1:-7658561 | MS.gene31207:CDS |
| CGGCACAGAGAGCAGCCGAG+TGG | 0.661447 | 2.1:-7658707 | MS.gene31207:CDS |
| GAAACTCTTGGAAACCCGCG+TGG | 0.671188 | 2.1:+7658531 | None:intergenic |
| GCTGAAACCGGGAAACCACA+AGG | 0.672498 | 2.1:-7658663 | MS.gene31207:CDS |
| TCTGACGGCGGTGATCCACG+CGG | 0.687284 | 2.1:-7658546 | MS.gene31207:CDS |
| GGATACTAATCCTGAAGACG+TGG | 0.696029 | 2.1:-7658012 | MS.gene31207:CDS |
| AAGTTAACAAGCATACGGAA+GGG | 0.707389 | 2.1:-7656234 | MS.gene31207:CDS |
| TCATTTCCGAGGGATCCTCG+AGG | 0.749320 | 2.1:-7658903 | MS.gene31207:CDS |
| AATACTTCGAGGGATCCTCG+AGG | 0.764977 | 2.1:+7658888 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATATTTACTATACA+TGG | + | chr2.1:7657034-7657053 | None:intergenic | 10.0% |
| !! | TTACAATTACAATTAAATTA+AGG | - | chr2.1:7657921-7657940 | MS.gene31207:CDS | 10.0% |
| !! | TTATTAACTAACATTAATTT+CGG | - | chr2.1:7658096-7658115 | MS.gene31207:intron | 10.0% |
| !!! | TTGAATTAAGTATAATTTTT+AGG | - | chr2.1:7657467-7657486 | MS.gene31207:intron | 10.0% |
| !! | AATCACATGTAAAAAAAATA+TGG | - | chr2.1:7656907-7656926 | MS.gene31207:intron | 15.0% |
| !! | CAAAATTGACATTTAATTAA+TGG | - | chr2.1:7658185-7658204 | MS.gene31207:intron | 15.0% |
| !! | GAGTATTTAACTAAAAATTA+TGG | + | chr2.1:7658508-7658527 | None:intergenic | 15.0% |
| !! | TATTAACTAACATTAATTTC+GGG | - | chr2.1:7658097-7658116 | MS.gene31207:intron | 15.0% |
| !!! | ATATAATTGTTTTTTGATTG+TGG | - | chr2.1:7657050-7657069 | MS.gene31207:intron | 15.0% |
| !!! | CATTAATTAAATGTCAATTT+TGG | + | chr2.1:7658187-7658206 | None:intergenic | 15.0% |
| !!! | TATAAGTTCTTTTGATATTA+TGG | - | chr2.1:7658696-7658715 | MS.gene31207:CDS | 15.0% |
| !!! | TATAATTGTTTTTTGATTGT+GGG | - | chr2.1:7657051-7657070 | MS.gene31207:intron | 15.0% |
| !!! | TTTAATTTACGGTAAAAATT+AGG | + | chr2.1:7657810-7657829 | None:intergenic | 15.0% |
| !!! | TTTTTGCTCAAAAAAAAAAA+AGG | + | chr2.1:7656803-7656822 | None:intergenic | 15.0% |
| !! | AAATATTAAGATAGAAAGTG+TGG | - | chr2.1:7658245-7658264 | MS.gene31207:intron | 20.0% |
| !! | ATAAATAAGACTGAAATCTA+AGG | + | chr2.1:7658012-7658031 | None:intergenic | 20.0% |
| !! | CTCTTAAATTAAATATCTTG+GGG | - | chr2.1:7658159-7658178 | MS.gene31207:intron | 20.0% |
| !! | GCTCTTAAATTAAATATCTT+GGG | - | chr2.1:7658158-7658177 | MS.gene31207:intron | 20.0% |
| !! | TAAATAAGACTGAAATCTAA+GGG | + | chr2.1:7658011-7658030 | None:intergenic | 20.0% |
| !! | TCTTAAATTAAATATCTTGG+GGG | - | chr2.1:7658160-7658179 | MS.gene31207:intron | 20.0% |
| !! | TGCTCTTAAATTAAATATCT+TGG | - | chr2.1:7658157-7658176 | MS.gene31207:intron | 20.0% |
| !!! | AAAAAGACTTTTAAAAAAGG+AGG | + | chr2.1:7658732-7658751 | None:intergenic | 20.0% |
| !!! | AAATTGTAGTTTTCAAAGTT+AGG | - | chr2.1:7657735-7657754 | MS.gene31207:intron | 20.0% |
| !!! | AAATTGTAGTTTTCATACTT+AGG | + | chr2.1:7657543-7657562 | None:intergenic | 20.0% |
| !!! | AACTTTGAAAACTACAATTT+TGG | + | chr2.1:7657735-7657754 | None:intergenic | 20.0% |
| !!! | AAGTATGAAAACTACAATTT+TGG | - | chr2.1:7657543-7657562 | MS.gene31207:intron | 20.0% |
| !!! | AATATTAAGATAGAAAGTGT+GGG | - | chr2.1:7658246-7658265 | MS.gene31207:intron | 20.0% |
| !!! | AATTGTAGTTTTCAAAGTTA+GGG | - | chr2.1:7657736-7657755 | MS.gene31207:intron | 20.0% |
| !!! | AATTGTAGTTTTCATACTTA+GGG | + | chr2.1:7657542-7657561 | None:intergenic | 20.0% |
| !!! | GCAAAAAAGACTTTTAAAAA+AGG | + | chr2.1:7658735-7658754 | None:intergenic | 20.0% |
| !!! | TAGACGGTTAATTTAATTTA+CGG | + | chr2.1:7657821-7657840 | None:intergenic | 20.0% |
| ! | AAAAGGAATTCTAATAACTC+TGG | - | chr2.1:7656531-7656550 | MS.gene31207:intron | 25.0% |
| ! | GATTAATTTAGTTGAGTAGA+CGG | + | chr2.1:7657837-7657856 | None:intergenic | 25.0% |
| ! | TAAAGAAGATAATCAATGAG+AGG | - | chr2.1:7658666-7658685 | MS.gene31207:CDS | 25.0% |
| ! | TAATAAAATCTTAGTCTGAC+CGG | + | chr2.1:7658082-7658101 | None:intergenic | 25.0% |
| ! | TATACTTCAAAAGAAGTCAT+AGG | - | chr2.1:7656726-7656745 | MS.gene31207:intron | 25.0% |
| ! | TTCAACTATTTGATTAACCA+TGG | + | chr2.1:7657452-7657471 | None:intergenic | 25.0% |
| !! | ATATTAAGATAGAAAGTGTG+GGG | - | chr2.1:7658247-7658266 | MS.gene31207:intron | 25.0% |
| !! | ATTGTAGTTTTCAAAGTTAG+GGG | - | chr2.1:7657737-7657756 | MS.gene31207:intron | 25.0% |
| !! | ATTGTAGTTTTCATACTTAG+GGG | + | chr2.1:7657541-7657560 | None:intergenic | 25.0% |
| !! | TCAAGAATGAATTTTCTTGA+TGG | - | chr2.1:7657957-7657976 | MS.gene31207:CDS | 25.0% |
| !! | TTTTCAAAATGTTGCGATTA+TGG | - | chr2.1:7657637-7657656 | MS.gene31207:intron | 25.0% |
| !! | TTTTGATATTATGGACCAAA+TGG | - | chr2.1:7658705-7658724 | MS.gene31207:CDS | 25.0% |
| !! | TTTTGTTCCATAAGTTAAGT+AGG | + | chr2.1:7656842-7656861 | None:intergenic | 25.0% |
| !!! | CAACATTTTGAAAAGATAAG+GGG | + | chr2.1:7657631-7657650 | None:intergenic | 25.0% |
| !!! | GCAACATTTTGAAAAGATAA+GGG | + | chr2.1:7657632-7657651 | None:intergenic | 25.0% |
| AAGATTCTAACCTTTGAATG+TGG | - | chr2.1:7658774-7658793 | MS.gene31207:CDS | 30.0% | |
| AAGGTTACTGAATTACAAGA+AGG | - | chr2.1:7657173-7657192 | MS.gene31207:intron | 30.0% | |
| ACATATTTCCCTTATGTTAG+GGG | + | chr2.1:7657601-7657620 | None:intergenic | 30.0% | |
| ACGTTAAAATTTGTGAACCA+TGG | - | chr2.1:7657432-7657451 | MS.gene31207:intron | 30.0% | |
| AGACATATTTCCCTTATGTT+AGG | + | chr2.1:7657603-7657622 | None:intergenic | 30.0% | |
| ATAAGGGGGTTAAAAGATAA+GGG | + | chr2.1:7657664-7657683 | None:intergenic | 30.0% | |
| ATCAAGTGTGTGTTGAAAAA+TGG | + | chr2.1:7656879-7656898 | None:intergenic | 30.0% | |
| CTATGCATGTAATGTAAGAT+AGG | + | chr2.1:7658530-7658549 | None:intergenic | 30.0% | |
| GACATATTTCCCTTATGTTA+GGG | + | chr2.1:7657602-7657621 | None:intergenic | 30.0% | |
| TCAAGTGTGTGTTGAAAAAT+GGG | + | chr2.1:7656878-7656897 | None:intergenic | 30.0% | |
| TTACTGAATTACAAGAAGGA+TGG | - | chr2.1:7657177-7657196 | MS.gene31207:intron | 30.0% | |
| TTCAACACACACTTGATATA+TGG | - | chr2.1:7656882-7656901 | MS.gene31207:intron | 30.0% | |
| TTTAAAAAAGGAGGTCCATT+TGG | + | chr2.1:7658723-7658742 | None:intergenic | 30.0% | |
| ! | AATTTACAAAGTGCCAAAGA+CGG | - | chr2.1:7658350-7658369 | MS.gene31207:intron | 30.0% |
| ! | CTCATCAGTTTTCAAAGTTA+GGG | - | chr2.1:7657707-7657726 | MS.gene31207:intron | 30.0% |
| ! | CTTCTTTTCATTACACATCT+AGG | + | chr2.1:7658801-7658820 | None:intergenic | 30.0% |
| ! | CTTTACTTTCCCTCATATTT+TGG | + | chr2.1:7658555-7658574 | None:intergenic | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | - | chr2.1:7657515-7657534 | MS.gene31207:intron | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | + | chr2.1:7657534-7657515 | None:intergenic | 30.0% |
| ! | GTTATTAGAATTCCTTTTGC+CGG | + | chr2.1:7656529-7656548 | None:intergenic | 30.0% |
| ! | TCATCAGTTTTCAAAGTTAG+GGG | - | chr2.1:7657708-7657727 | MS.gene31207:intron | 30.0% |
| ! | TCTCATCAGTTTTCAAAGTT+AGG | - | chr2.1:7657706-7657725 | MS.gene31207:intron | 30.0% |
| ! | TTGTAGTTTTCAAAGTTAGG+GGG | - | chr2.1:7657738-7657757 | MS.gene31207:intron | 30.0% |
| !! | AACTTTTTGAAAGTTAAGGG+AGG | + | chr2.1:7657508-7657527 | None:intergenic | 30.0% |
| !! | ATCGCAACTTTTTGAAAGAT+AGG | - | chr2.1:7657766-7657785 | MS.gene31207:intron | 30.0% |
| !! | CGCAACATTTTGAAAAGATA+AGG | + | chr2.1:7657633-7657652 | None:intergenic | 30.0% |
| !! | CGCAACTTTTTGAAAGTTAA+GGG | + | chr2.1:7657511-7657530 | None:intergenic | 30.0% |
| !! | TCGCAACTTTTTGAAAGATA+GGG | - | chr2.1:7657767-7657786 | MS.gene31207:intron | 30.0% |
| !! | TCGCAACTTTTTGAAAGTTA+AGG | + | chr2.1:7657512-7657531 | None:intergenic | 30.0% |
| !!! | ATTGTTTTTTGATTGTGGGT+TGG | - | chr2.1:7657055-7657074 | MS.gene31207:intron | 30.0% |
| !!! | TTGTTTTTTGATTGTGGGTT+GGG | - | chr2.1:7657056-7657075 | MS.gene31207:intron | 30.0% |
| !!! | TTTAACCCCCTTATCTTTTT+TGG | - | chr2.1:7657670-7657689 | MS.gene31207:intron | 30.0% |
| AAGAAGTCATAGGAAGAAAC+TGG | - | chr2.1:7656736-7656755 | MS.gene31207:intron | 35.0% | |
| AAGTTAACAAGCATACGGAA+GGG | - | chr2.1:7658885-7658904 | MS.gene31207:CDS | 35.0% | |
| ACACGTGTCCAAAAAAGATA+AGG | + | chr2.1:7657681-7657700 | None:intergenic | 35.0% | |
| ACGTGTCCAAAAAAGATAAG+GGG | + | chr2.1:7657679-7657698 | None:intergenic | 35.0% | |
| AGAAGAATTTACGTCCCAAT+GGG | - | chr2.1:7658915-7658934 | MS.gene31207:CDS | 35.0% | |
| AGAGCATATTTCCCTAAACA+TGG | + | chr2.1:7657572-7657591 | None:intergenic | 35.0% | |
| AGCATATTTCCCTAAACATG+GGG | + | chr2.1:7657570-7657589 | None:intergenic | 35.0% | |
| ATAGTGAGAAGATTCCAGAA+TGG | + | chr2.1:7657207-7657226 | None:intergenic | 35.0% | |
| ATGCATAGTGCCAAAATATG+AGG | - | chr2.1:7658542-7658561 | MS.gene31207:CDS | 35.0% | |
| ATGCATTTCTCACTGTGATA+AGG | - | chr2.1:7658292-7658311 | MS.gene31207:intron | 35.0% | |
| CAAGTGTGTGTTGAAAAATG+GGG | + | chr2.1:7656877-7656896 | None:intergenic | 35.0% | |
| CACGTGTCCAAAAAAGATAA+GGG | + | chr2.1:7657680-7657699 | None:intergenic | 35.0% | |
| CATACCATCATATCGAATCA+AGG | + | chr2.1:7658951-7658970 | None:intergenic | 35.0% | |
| CATATTTCCCTTATGTTAGG+GGG | + | chr2.1:7657600-7657619 | None:intergenic | 35.0% | |
| CCATAAGTTAAGTAGGTACT+AGG | + | chr2.1:7656835-7656854 | None:intergenic | 35.0% | |
| CCTAGTACCTACTTAACTTA+TGG | - | chr2.1:7656832-7656851 | MS.gene31207:intron | 35.0% | |
| GAGCATATTTCCCTAAACAT+GGG | + | chr2.1:7657571-7657590 | None:intergenic | 35.0% | |
| GATAAGGGGGTTAAAAGATA+AGG | + | chr2.1:7657665-7657684 | None:intergenic | 35.0% | |
| GCAATGTGCTCAAGTTAATT+GGG | - | chr2.1:7657250-7657269 | MS.gene31207:intron | 35.0% | |
| GGCTAATTCATTTGAGTGTA+TGG | - | chr2.1:7657397-7657416 | MS.gene31207:intron | 35.0% | |
| TAAGGGGGTTAAAAGATAAG+GGG | + | chr2.1:7657663-7657682 | None:intergenic | 35.0% | |
| TCAACAAACTTTCGTGGTTT+CGG | - | chr2.1:7656641-7656660 | MS.gene31207:intron | 35.0% | |
| TCATATCGAATCAAGGATTC+AGG | + | chr2.1:7658944-7658963 | None:intergenic | 35.0% | |
| TGCATACATAATCGGGTAAT+CGG | + | chr2.1:7656679-7656698 | None:intergenic | 35.0% | |
| TGCATAGTGCCAAAATATGA+GGG | - | chr2.1:7658543-7658562 | MS.gene31207:CDS | 35.0% | |
| TGCCACAAAACATTCACATT+GGG | + | chr2.1:7658853-7658872 | None:intergenic | 35.0% | |
| TGGACACAATTAATCACATG+TGG | - | chr2.1:7657376-7657395 | MS.gene31207:intron | 35.0% | |
| TGTTGGATTGAATACTTCGA+GGG | + | chr2.1:7656244-7656263 | None:intergenic | 35.0% | |
| TTAGTCTGACCGGAAATTAT+GGG | + | chr2.1:7658072-7658091 | None:intergenic | 35.0% | |
| TTGTTGGATTGAATACTTCG+AGG | + | chr2.1:7656245-7656264 | None:intergenic | 35.0% | |
| ! | AATGTTTTGTGGCAGAATGT+TGG | - | chr2.1:7658859-7658878 | MS.gene31207:CDS | 35.0% |
| ! | CTTTTAACCCCCTAACATAA+GGG | - | chr2.1:7657590-7657609 | MS.gene31207:intron | 35.0% |
| ! | GAATCCTTGATTCGATATGA+TGG | - | chr2.1:7658944-7658963 | MS.gene31207:CDS | 35.0% |
| ! | TACCCAATGTGAATGTTTTG+TGG | - | chr2.1:7658848-7658867 | MS.gene31207:CDS | 35.0% |
| ! | TCTTTTAACCCCCTAACATA+AGG | - | chr2.1:7657589-7657608 | MS.gene31207:intron | 35.0% |
| ! | TGCTTTTCAACAAACTTTCG+TGG | - | chr2.1:7656635-7656654 | MS.gene31207:intron | 35.0% |
| ! | TTTTTCTATACCCGCAACAT+TGG | + | chr2.1:7657881-7657900 | None:intergenic | 35.0% |
| !! | AAGATAAGGGAAGCATTAGA+AGG | - | chr2.1:7657132-7657151 | MS.gene31207:intron | 35.0% |
| !! | CGCAACTTTTTGAAAGATAG+GGG | - | chr2.1:7657768-7657787 | MS.gene31207:intron | 35.0% |
| !! | GCAACTTTTTGAAAGATAGG+GGG | - | chr2.1:7657769-7657788 | MS.gene31207:intron | 35.0% |
| !! | TGATGGATTCAAGAATGACA+TGG | - | chr2.1:7657974-7657993 | MS.gene31207:CDS | 35.0% |
| AAAAGCAAGAGTCACAAGTG+TGG | + | chr2.1:7658443-7658462 | None:intergenic | 40.0% | |
| AACAAGCAACTCAACTTCAC+CGG | - | chr2.1:7656260-7656279 | MS.gene31207:intron | 40.0% | |
| AATAACTCTGGCAGAGTTTC+CGG | - | chr2.1:7656543-7656562 | MS.gene31207:intron | 40.0% | |
| AATGCATGCATCTTTCTCTC+TGG | + | chr2.1:7658279-7658298 | None:intergenic | 40.0% | |
| ACAAAGACCATCATTTCCGA+GGG | - | chr2.1:7656206-7656225 | MS.gene31207:CDS | 40.0% | |
| ACATCTAGGTCCACATTCAA+AGG | + | chr2.1:7658787-7658806 | None:intergenic | 40.0% | |
| ATATATACAGCGTGTCAGTG+TGG | + | chr2.1:7658319-7658338 | None:intergenic | 40.0% | |
| ATGAAGTCACCAACACTTCA+TGG | - | chr2.1:7656358-7656377 | MS.gene31207:intron | 40.0% | |
| ATTGCCATCATCATCCTTGA+TGG | + | chr2.1:7657235-7657254 | None:intergenic | 40.0% | |
| CAGTTAAACATAGCCGTCTT+TGG | + | chr2.1:7658366-7658385 | None:intergenic | 40.0% | |
| CCTGAAAACATGGACAGAAA+CGG | - | chr2.1:7656305-7656324 | MS.gene31207:intron | 40.0% | |
| CCTGCACTTGCATACATAAT+CGG | + | chr2.1:7656687-7656706 | None:intergenic | 40.0% | |
| CGTGTCCAAAAAAGATAAGG+GGG | + | chr2.1:7657678-7657697 | None:intergenic | 40.0% | |
| CTGCACTTGCATACATAATC+GGG | + | chr2.1:7656686-7656705 | None:intergenic | 40.0% | |
| CTGCCACAAAACATTCACAT+TGG | + | chr2.1:7658854-7658873 | None:intergenic | 40.0% | |
| CTTAGTCTGACCGGAAATTA+TGG | + | chr2.1:7658073-7658092 | None:intergenic | 40.0% | |
| GAACAGAATGGAAAGTTCTC+CGG | - | chr2.1:7656507-7656526 | MS.gene31207:intron | 40.0% | |
| GAAGGTGGGAAAAGTTATTG+TGG | - | chr2.1:7657150-7657169 | MS.gene31207:intron | 40.0% | |
| GAAGTTAACAAGCATACGGA+AGG | - | chr2.1:7658884-7658903 | MS.gene31207:CDS | 40.0% | |
| GAGAAGAATTTACGTCCCAA+TGG | - | chr2.1:7658914-7658933 | MS.gene31207:CDS | 40.0% | |
| GCATACATAATCGGGTAATC+GGG | + | chr2.1:7656678-7656697 | None:intergenic | 40.0% | |
| GCATATTTCCCTAAACATGG+GGG | + | chr2.1:7657569-7657588 | None:intergenic | 40.0% | |
| GCGACACAATTAATTACACG+TGG | - | chr2.1:7657356-7657375 | MS.gene31207:intron | 40.0% | |
| GGCAATGTGCTCAAGTTAAT+TGG | - | chr2.1:7657249-7657268 | MS.gene31207:intron | 40.0% | |
| GGTCTTTGTGATGAAGATGA+TGG | + | chr2.1:7656195-7656214 | None:intergenic | 40.0% | |
| GGTGGAAGTTAACAAGCATA+CGG | - | chr2.1:7658880-7658899 | MS.gene31207:CDS | 40.0% | |
| GTGGGAAAAGTTATTGTGGA+AGG | - | chr2.1:7657154-7657173 | MS.gene31207:intron | 40.0% | |
| GTTAATCAGGTGCAGAACTA+TGG | + | chr2.1:7656979-7656998 | None:intergenic | 40.0% | |
| TAGTCTGACCGGAAATTATG+GGG | + | chr2.1:7658071-7658090 | None:intergenic | 40.0% | |
| TCTCACTATTTCACCCATCA+AGG | - | chr2.1:7657218-7657237 | MS.gene31207:intron | 40.0% | |
| TGAAGACGTGGCAAAGATAA+GGG | - | chr2.1:7657119-7657138 | MS.gene31207:intron | 40.0% | |
| TGATTAACCAGATATCACGC+AGG | - | chr2.1:7656991-7657010 | MS.gene31207:intron | 40.0% | |
| TGCAGGTTTCTTCAACATGA+CGG | - | chr2.1:7656701-7656720 | MS.gene31207:intron | 40.0% | |
| TGCGTGATATCTGGTTAATC+AGG | + | chr2.1:7656992-7657011 | None:intergenic | 40.0% | |
| TGGACATGCATTCATGACAT+TGG | + | chr2.1:7658488-7658507 | None:intergenic | 40.0% | |
| TGTGTGTTGAAAAATGGGGT+AGG | + | chr2.1:7656873-7656892 | None:intergenic | 40.0% | |
| TTAAACACCTGCGTGATATC+TGG | + | chr2.1:7657001-7657020 | None:intergenic | 40.0% | |
| TTCAAATCCTCCGAAACTCT+TGG | + | chr2.1:7656603-7656622 | None:intergenic | 40.0% | |
| TTGCCATCATCATCCTTGAT+GGG | + | chr2.1:7657234-7657253 | None:intergenic | 40.0% | |
| ! | ACACTTGTGACTCTTGCTTT+TGG | - | chr2.1:7658442-7658461 | MS.gene31207:CDS | 40.0% |
| ! | ACGTGATTAGTCCAATGTTG+CGG | - | chr2.1:7657867-7657886 | MS.gene31207:intron | 40.0% |
| !! | AATTTTGGCCCCCATGTTTA+GGG | - | chr2.1:7657558-7657577 | MS.gene31207:intron | 40.0% |
| !! | ATAAGGGAAGCATTAGAAGG+TGG | - | chr2.1:7657135-7657154 | MS.gene31207:intron | 40.0% |
| !! | TAAGGGAAGCATTAGAAGGT+GGG | - | chr2.1:7657136-7657155 | MS.gene31207:intron | 40.0% |
| !!! | TTTTTGATTGTGGGTTGGGT+GGG | - | chr2.1:7657060-7657079 | MS.gene31207:intron | 40.0% |
| !!! | TTTTTTGATTGTGGGTTGGG+TGG | - | chr2.1:7657059-7657078 | MS.gene31207:intron | 40.0% |
| AAGGATTCAGGCAACCCATT+GGG | + | chr2.1:7658932-7658951 | None:intergenic | 45.0% | |
| ACCCATCACCCCATAATTTC+CGG | - | chr2.1:7658060-7658079 | MS.gene31207:intron | 45.0% | |
| ACCGGAAATTATGGGGTGAT+GGG | + | chr2.1:7658064-7658083 | None:intergenic | 45.0% | |
| AGAAGGATGGAACTCCATTC+TGG | - | chr2.1:7657190-7657209 | MS.gene31207:intron | 45.0% | |
| AGTCACCAACACTTCATGGA+TGG | - | chr2.1:7656362-7656381 | MS.gene31207:intron | 45.0% | |
| ATGGAAAGTTCTCCGGCAAA+AGG | - | chr2.1:7656514-7656533 | MS.gene31207:intron | 45.0% | |
| CACAAAGACCATCATTTCCG+AGG | - | chr2.1:7656205-7656224 | MS.gene31207:CDS | 45.0% | |
| CACACTCACACCTGAAAACA+TGG | - | chr2.1:7656295-7656314 | MS.gene31207:intron | 45.0% | |
| CACTTCATGGATGGCAATCA+AGG | - | chr2.1:7656371-7656390 | MS.gene31207:intron | 45.0% | |
| CATAATCGGGTAATCGGGTT+TGG | + | chr2.1:7656673-7656692 | None:intergenic | 45.0% | |
| CCGATTATGTATGCAAGTGC+AGG | - | chr2.1:7656684-7656703 | MS.gene31207:intron | 45.0% | |
| CTGAAGACGTGGCAAAGATA+AGG | - | chr2.1:7657118-7657137 | MS.gene31207:intron | 45.0% | |
| CTTATCTTTGCCACGTCTTC+AGG | + | chr2.1:7657120-7657139 | None:intergenic | 45.0% | |
| GATTGCCATCCATGAAGTGT+TGG | + | chr2.1:7656370-7656389 | None:intergenic | 45.0% | |
| GCAATCAAGGAAGGAGAAAC+CGG | - | chr2.1:7656384-7656403 | MS.gene31207:intron | 45.0% | |
| GCAGGTTTCTTCAACATGAC+GGG | - | chr2.1:7656702-7656721 | MS.gene31207:intron | 45.0% | |
| GGATACTAATCCTGAAGACG+TGG | - | chr2.1:7657107-7657126 | MS.gene31207:intron | 45.0% | |
| TCACCCATCAAGGATGATGA+TGG | - | chr2.1:7657228-7657247 | MS.gene31207:intron | 45.0% | |
| TCATGGATGGCAATCAAGGA+AGG | - | chr2.1:7656375-7656394 | MS.gene31207:intron | 45.0% | |
| TCCATTCTGTTCATCGTCAC+CGG | + | chr2.1:7656499-7656518 | None:intergenic | 45.0% | |
| TTTCTAACTCCCACTCCTTG+TGG | + | chr2.1:7656474-7656493 | None:intergenic | 45.0% | |
| ! | AGATAGAAAGTGTGGGGACA+TGG | - | chr2.1:7658253-7658272 | MS.gene31207:intron | 45.0% |
| ! | CCGTTTCTGTCCATGTTTTC+AGG | + | chr2.1:7656308-7656327 | None:intergenic | 45.0% |
| ! | CGTGATTAGTCCAATGTTGC+GGG | - | chr2.1:7657868-7657887 | MS.gene31207:intron | 45.0% |
| ! | GGTGAAGTTGAGTTGCTTGT+TGG | + | chr2.1:7656261-7656280 | None:intergenic | 45.0% |
| ! | GTTTTGTGGCAGAATGTTGG+TGG | - | chr2.1:7658862-7658881 | MS.gene31207:CDS | 45.0% |
| !! | CAATTTTGGCCCCCATGTTT+AGG | - | chr2.1:7657557-7657576 | MS.gene31207:intron | 45.0% |
| !! | CAGTCGGTTTTTACAAGGTG+CGG | - | chr2.1:7657086-7657105 | MS.gene31207:intron | 45.0% |
| !!! | GTTTTCAGGTGTGAGTGTGA+CGG | + | chr2.1:7656294-7656313 | None:intergenic | 45.0% |
| !!! | TTTTGATTGTGGGTTGGGTG+GGG | - | chr2.1:7657061-7657080 | MS.gene31207:intron | 45.0% |
| AATACTTCGAGGGATCCTCG+AGG | + | chr2.1:7656234-7656253 | None:intergenic | 50.0% | |
| ACGCGGGTTTCCAAGAGTTT+CGG | - | chr2.1:7656590-7656609 | MS.gene31207:intron | 50.0% | |
| CAAGCATACGGAAGGGTCAA+AGG | - | chr2.1:7658892-7658911 | MS.gene31207:CDS | 50.0% | |
| CAAGGATTCAGGCAACCCAT+TGG | + | chr2.1:7658933-7658952 | None:intergenic | 50.0% | |
| CGCACCTTGTAAAAACCGAC+TGG | + | chr2.1:7657088-7657107 | None:intergenic | 50.0% | |
| CTCAGAACAGACGCTGAAAC+CGG | - | chr2.1:7656444-7656463 | MS.gene31207:intron | 50.0% | |
| GACCGGAAATTATGGGGTGA+TGG | + | chr2.1:7658065-7658084 | None:intergenic | 50.0% | |
| GGAGTGGGAGTTAGAAACTC+CGG | - | chr2.1:7656477-7656496 | MS.gene31207:intron | 50.0% | |
| GTTTCCGGTGACTCTTCTGA+CGG | - | chr2.1:7656558-7656577 | MS.gene31207:intron | 50.0% | |
| TCAGAACAGACGCTGAAACC+GGG | - | chr2.1:7656445-7656464 | MS.gene31207:intron | 50.0% | |
| TCCGGTGACGATGAACAGAA+TGG | - | chr2.1:7656495-7656514 | MS.gene31207:intron | 50.0% | |
| TGGTGTAGTCATGTCACACG+AGG | - | chr2.1:7658205-7658224 | MS.gene31207:intron | 50.0% | |
| !! | AGTGTTGGTGACTTCATCGC+TGG | + | chr2.1:7656355-7656374 | None:intergenic | 50.0% |
| !! | GGGTCCAGTCGGTTTTTACA+AGG | - | chr2.1:7657081-7657100 | MS.gene31207:intron | 50.0% |
| AACCGGGAAACCACAAGGAG+TGG | - | chr2.1:7656461-7656480 | MS.gene31207:intron | 55.0% | |
| ACCGGGAAACCACAAGGAGT+GGG | - | chr2.1:7656462-7656481 | MS.gene31207:intron | 55.0% | |
| CGAGGATCCCTCGGAAATGA+TGG | + | chr2.1:7656216-7656235 | None:intergenic | 55.0% | |
| CGGGTTTCCAAGAGTTTCGG+AGG | - | chr2.1:7656593-7656612 | MS.gene31207:intron | 55.0% | |
| GAAACTCTTGGAAACCCGCG+TGG | + | chr2.1:7656591-7656610 | None:intergenic | 55.0% | |
| GCTGAAACCGGGAAACCACA+AGG | - | chr2.1:7656456-7656475 | MS.gene31207:intron | 55.0% | |
| TCATTTCCGAGGGATCCTCG+AGG | - | chr2.1:7656216-7656235 | MS.gene31207:CDS | 55.0% | |
| TCCCACTCCTTGTGGTTTCC+CGG | + | chr2.1:7656466-7656485 | None:intergenic | 55.0% | |
| TCTGAGCACCAAACCCCACT+CGG | + | chr2.1:7656430-7656449 | None:intergenic | 55.0% | |
| ! | GAGTGTGACGGAGAACGTAC+CGG | + | chr2.1:7656282-7656301 | None:intergenic | 55.0% |
| ACCGCCGTCAGAAGAGTCAC+CGG | + | chr2.1:7656565-7656584 | None:intergenic | 60.0% | |
| AGGGATCCTCGAGGATCCCT+CGG | + | chr2.1:7656244-7656225 | None:intergenic | 60.0% | |
| TCCGGTGACTCTTCTGACGG+CGG | - | chr2.1:7656561-7656580 | MS.gene31207:intron | 60.0% | |
| GAGAGCAGCCGAGTGGGGTT+TGG | - | chr2.1:7656419-7656438 | MS.gene31207:intron | 65.0% | |
| GCACAGAGAGCAGCCGAGTG+GGG | - | chr2.1:7656414-7656433 | MS.gene31207:intron | 65.0% | |
| GGCACAGAGAGCAGCCGAGT+GGG | - | chr2.1:7656413-7656432 | MS.gene31207:intron | 65.0% | |
| TCTGACGGCGGTGATCCACG+CGG | - | chr2.1:7656573-7656592 | MS.gene31207:intron | 65.0% | |
| ! | TGGGTTGGGTGGGGTCCAGT+CGG | - | chr2.1:7657070-7657089 | MS.gene31207:intron | 65.0% |
| CGGCACAGAGAGCAGCCGAG+TGG | - | chr2.1:7656412-7656431 | MS.gene31207:intron | 70.0% | |
| CTCGGCTGCTCTCTGTGCCG+CGG | + | chr2.1:7656412-7656431 | None:intergenic | 70.0% | |
| CTGACGGCGGTGATCCACGC+GGG | - | chr2.1:7656574-7656593 | MS.gene31207:intron | 70.0% | |
| GGAAGGAGAAACCGGCGCCG+CGG | - | chr2.1:7656392-7656411 | MS.gene31207:intron | 70.0% | |
| TGCTCTCTGTGCCGCGGCGC+CGG | + | chr2.1:7656406-7656425 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 7656171 | 7658970 | 7656171 | ID=MS.gene31207 |
| chr2.1 | mRNA | 7656171 | 7658970 | 7656171 | ID=MS.gene31207.t1;Parent=MS.gene31207 |
| chr2.1 | exon | 7658384 | 7658970 | 7658384 | ID=MS.gene31207.t1.exon1;Parent=MS.gene31207.t1 |
| chr2.1 | CDS | 7658384 | 7658970 | 7658384 | ID=cds.MS.gene31207.t1;Parent=MS.gene31207.t1 |
| chr2.1 | exon | 7657870 | 7658052 | 7657870 | ID=MS.gene31207.t1.exon2;Parent=MS.gene31207.t1 |
| chr2.1 | CDS | 7657870 | 7658052 | 7657870 | ID=cds.MS.gene31207.t1;Parent=MS.gene31207.t1 |
| chr2.1 | exon | 7656171 | 7656267 | 7656171 | ID=MS.gene31207.t1.exon3;Parent=MS.gene31207.t1 |
| chr2.1 | CDS | 7656171 | 7656267 | 7656171 | ID=cds.MS.gene31207.t1;Parent=MS.gene31207.t1 |
| Gene Sequence |
| Protein sequence |
