Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008730.t1 | XP_003608061.1 | 98.1 | 469 | 9 | 0 | 3 | 471 | 9 | 477 | 7.50E-274 | 952.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008730.t1 | O74965 | 35.9 | 437 | 254 | 7 | 38 | 467 | 39 | 456 | 1.1e-76 | 288.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008730.t1 | G7JNL0 | 98.1 | 469 | 9 | 0 | 3 | 471 | 9 | 477 | 5.4e-274 | 952.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008730 | MS.gene029211 | PPI |
| MS.gene008730 | MS.gene32083 | PPI |
| MS.gene008730 | MS.gene036254 | PPI |
| MS.gene008730 | MS.gene003175 | PPI |
| MS.gene008730 | MS.gene82426 | PPI |
| MS.gene008730 | MS.gene36472 | PPI |
| MS.gene008730 | MS.gene030823 | PPI |
| MS.gene008730 | MS.gene28161 | PPI |
| MS.gene008730 | MS.gene57305 | PPI |
| MS.gene023135 | MS.gene008730 | PPI |
| MS.gene008730 | MS.gene028153 | PPI |
| MS.gene004699 | MS.gene008730 | PPI |
| MS.gene008730 | MS.gene83444 | PPI |
| MS.gene008730 | MS.gene35140 | PPI |
| MS.gene008730 | MS.gene037362 | PPI |
| MS.gene008730 | MS.gene40016 | PPI |
| MS.gene030707 | MS.gene008730 | PPI |
| MS.gene008730 | MS.gene58159 | PPI |
| MS.gene008730 | MS.gene048301 | PPI |
| MS.gene008730 | MS.gene028318 | PPI |
| MS.gene008730 | MS.gene93131 | PPI |
| MS.gene008730 | MS.gene70303 | PPI |
| MS.gene008730 | MS.gene72768 | PPI |
| MS.gene02854 | MS.gene008730 | PPI |
| MS.gene008730 | MS.gene01984 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008730.t1 | MTR_4g087280 | 98.225 | 507 | 9 | 0 | 3 | 509 | 9 | 515 | 0.0 | 1039 |
| MS.gene008730.t1 | MTR_4g087280 | 97.890 | 474 | 10 | 0 | 3 | 476 | 9 | 482 | 0.0 | 976 |
| MS.gene008730.t1 | MTR_5g091610 | 69.892 | 93 | 16 | 2 | 332 | 424 | 126 | 206 | 1.32e-35 | 134 |
| MS.gene008730.t1 | MTR_3g105430 | 23.750 | 400 | 266 | 14 | 45 | 414 | 224 | 614 | 1.25e-20 | 95.9 |
| MS.gene008730.t1 | MTR_2g088350 | 97.436 | 39 | 1 | 0 | 397 | 435 | 1 | 39 | 7.11e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008730.t1 | AT1G73180 | 67.418 | 488 | 155 | 1 | 3 | 490 | 6 | 489 | 0.0 | 717 |
| MS.gene008730.t1 | AT1G73180 | 67.511 | 474 | 150 | 1 | 3 | 476 | 6 | 475 | 0.0 | 702 |
| MS.gene008730.t1 | AT5G27640 | 23.367 | 398 | 267 | 13 | 45 | 412 | 221 | 610 | 1.93e-21 | 98.6 |
| MS.gene008730.t1 | AT5G27640 | 23.367 | 398 | 267 | 13 | 45 | 412 | 221 | 610 | 1.93e-21 | 98.6 |
| MS.gene008730.t1 | AT5G27640 | 23.367 | 398 | 267 | 13 | 45 | 412 | 247 | 636 | 2.09e-21 | 98.6 |
| MS.gene008730.t1 | AT5G25780 | 23.000 | 400 | 269 | 14 | 45 | 414 | 222 | 612 | 3.73e-20 | 94.7 |
Find 101 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGGATACATTTCCCTTT+TGG | 0.184033 | 4.4:-25392648 | None:intergenic |
| GTTCTACAACCCAACTTAAA+TGG | 0.213890 | 4.4:+25391763 | MS.gene008730:CDS |
| CCAGAGTCACCAAGTAAATT+TGG | 0.263110 | 4.4:+25394056 | MS.gene008730:CDS |
| TGACATTCGGTTGACCGTTC+TGG | 0.288486 | 4.4:-25390328 | None:intergenic |
| TAAGACTGCAGCTGCTATTC+AGG | 0.307860 | 4.4:+25394321 | MS.gene008730:CDS |
| GGAGCACAGACCTTGGATTC+TGG | 0.314496 | 4.4:-25391535 | None:intergenic |
| CGGTAACTTGCCTGGTGATA+TGG | 0.317446 | 4.4:+25392900 | MS.gene008730:CDS |
| ATGGCATCTCTTGAGATATT+AGG | 0.332064 | 4.4:+25390175 | MS.gene008730:CDS |
| GTCGAGCCATAGGTTGAGTT+TGG | 0.333097 | 4.4:-25391725 | None:intergenic |
| GGAGAAACAGAAGGAGAAAA+AGG | 0.336853 | 4.4:+25394728 | MS.gene008730:CDS |
| GTAACACTGCTAAAGAAATT+AGG | 0.352354 | 4.4:+25390447 | MS.gene008730:CDS |
| AGCTCAGCGGAAGCAACTCC+TGG | 0.358438 | 4.4:-25391475 | None:intergenic |
| TTAGAGTTTGCTGTTGTGTA+TGG | 0.359900 | 4.4:+25392056 | MS.gene008730:CDS |
| AAAACAAATCAGAGTTACTA+TGG | 0.360928 | 4.4:+25391834 | MS.gene008730:CDS |
| AAGATAAGAATGTCACATTA+TGG | 0.367499 | 4.4:+25390555 | MS.gene008730:CDS |
| GTAGTGGCTTGGGTTGGTTT+AGG | 0.371129 | 4.4:-25394238 | None:intergenic |
| AACCATGATTCCATTTAAGT+TGG | 0.389606 | 4.4:-25391773 | None:intergenic |
| GGCCGGAAGAATGCTCACTA+TGG | 0.390559 | 4.4:+25390291 | MS.gene008730:CDS |
| GTTTGTCGGTTAAGAGTTCC+AGG | 0.393269 | 4.4:+25391457 | MS.gene008730:CDS |
| TGATGATGGATCTTTGCTTA+TGG | 0.395412 | 4.4:+25390388 | MS.gene008730:CDS |
| CAAGAAGTGCAGACCTCTAC+TGG | 0.395633 | 4.4:+25392587 | MS.gene008730:CDS |
| GATTTGTATTTGCAGTTGTT+AGG | 0.397376 | 4.4:+25394566 | MS.gene008730:intron |
| TCAGAGCTGAATTGAATTGC+CGG | 0.397889 | 4.4:-25391361 | None:intergenic |
| GATGCTCAATGGTCAAATTC+AGG | 0.398670 | 4.4:+25392032 | MS.gene008730:CDS |
| GTCCATAGTGAGCATTCTTC+CGG | 0.404734 | 4.4:-25390293 | None:intergenic |
| CAAACTATTTGCAGGCTGAT+TGG | 0.414549 | 4.4:+25394030 | MS.gene008730:intron |
| AAATGGAATCATGGTTCAAC+TGG | 0.419644 | 4.4:+25391780 | MS.gene008730:CDS |
| ATATATAGTAATGACAGAAT+TGG | 0.420958 | 4.4:-25390420 | None:intergenic |
| ACCATGATGCAATCACAAAC+TGG | 0.422671 | 4.4:-25394763 | None:intergenic |
| GCTGGCTTCGGTAACTTGCC+TGG | 0.426870 | 4.4:+25392892 | MS.gene008730:CDS |
| AAAACAGAAGCCACAAGATT+AGG | 0.427290 | 4.4:-25390482 | None:intergenic |
| GACCATTGAGCATCATGAAT+AGG | 0.429911 | 4.4:-25392023 | None:intergenic |
| CATGCACCCCATCTGTTGTC+AGG | 0.436554 | 4.4:-25391875 | None:intergenic |
| TGCAGTTGGGTTGGCAGAAG+AGG | 0.444560 | 4.4:-25394266 | None:intergenic |
| TCGAGCCATAGGTTGAGTTT+GGG | 0.446137 | 4.4:-25391724 | None:intergenic |
| AGAATATGACAAGGGCCAAT+TGG | 0.452350 | 4.4:+25390618 | MS.gene008730:CDS |
| CCATTGTCAACTTGAAGCCT+TGG | 0.454121 | 4.4:-25393428 | None:intergenic |
| CCAAATTTACTTGGTGACTC+TGG | 0.455862 | 4.4:-25394056 | None:intergenic |
| TTTCTAAAGGAGTTGTTTGT+CGG | 0.459404 | 4.4:+25391443 | MS.gene008730:CDS |
| TCAAACAGAGTTGCTTTAGC+AGG | 0.461231 | 4.4:-25392564 | None:intergenic |
| TAATTATTTGGCAGGGAAAG+AGG | 0.463070 | 4.4:+25391998 | MS.gene008730:intron |
| ACTTTATCAAGTTTGACATT+CGG | 0.464197 | 4.4:-25390341 | None:intergenic |
| ACCATGATTCCATTTAAGTT+GGG | 0.465601 | 4.4:-25391772 | None:intergenic |
| GTCATGAAATAGCACCCATC+TGG | 0.472938 | 4.4:-25393392 | None:intergenic |
| CCTCTACTGGAGCTTGGAAC+TGG | 0.479313 | 4.4:+25392600 | MS.gene008730:CDS |
| TAGAGTTTGCTGTTGTGTAT+GGG | 0.481102 | 4.4:+25392057 | MS.gene008730:CDS |
| ACTATCCGATGGAACCCAAA+AGG | 0.484935 | 4.4:+25392633 | MS.gene008730:CDS |
| TTGCATCAACCAAGGCTGAA+TGG | 0.489961 | 4.4:+25393348 | MS.gene008730:CDS |
| TTCGGTTGACCGTTCTGGAA+TGG | 0.491146 | 4.4:-25390323 | None:intergenic |
| GTGATGTCACCAAATTTACT+TGG | 0.492747 | 4.4:-25394065 | None:intergenic |
| AATGCTAAATTCAGTGATGA+TGG | 0.493653 | 4.4:+25390374 | MS.gene008730:CDS |
| AATTATTTGGCAGGGAAAGA+GGG | 0.495759 | 4.4:+25391999 | MS.gene008730:intron |
| TGCTTCCCAAACTCAACCTA+TGG | 0.499274 | 4.4:+25391719 | MS.gene008730:CDS |
| ACCCAACTTAAATGGAATCA+TGG | 0.499990 | 4.4:+25391771 | MS.gene008730:CDS |
| TGCAGACCTCTACTGGAGCT+TGG | 0.507684 | 4.4:+25392594 | MS.gene008730:CDS |
| TTCTTATCTTGCTGCCCGGA+AGG | 0.508656 | 4.4:-25390542 | None:intergenic |
| AATGGTCTGTGTCAAGTGAA+TGG | 0.511021 | 4.4:+25393366 | MS.gene008730:CDS |
| CAAGGCTTCAAGTTGACAAT+GGG | 0.512251 | 4.4:+25393429 | MS.gene008730:CDS |
| TAAGTTGGGTTGTAGAACAT+TGG | 0.514752 | 4.4:-25391758 | None:intergenic |
| TGACACAGACCATTCAGCCT+TGG | 0.524004 | 4.4:-25393357 | None:intergenic |
| TTATACTACCTGACAACAGA+TGG | 0.526764 | 4.4:+25391867 | MS.gene008730:CDS |
| TTCCATCGGATAGTGTTGTA+AGG | 0.527812 | 4.4:-25392624 | None:intergenic |
| GACATTCTTATCTTGCTGCC+CGG | 0.534592 | 4.4:-25390546 | None:intergenic |
| GGCCTATTCATGATGCTCAA+TGG | 0.539103 | 4.4:+25392021 | MS.gene008730:CDS |
| GCAGTTGTTAGGAGAGAGCT+CGG | 0.541868 | 4.4:+25394577 | MS.gene008730:intron |
| GAAGAATGCTCACTATGGAC+TGG | 0.543679 | 4.4:+25390296 | MS.gene008730:CDS |
| TGCATTTGTTCCAGAATCCA+AGG | 0.545907 | 4.4:+25391525 | MS.gene008730:CDS |
| TGCGGTGGACGATATGCGGC+TGG | 0.549407 | 4.4:-25394295 | None:intergenic |
| CTATCCGATGGAACCCAAAA+GGG | 0.550340 | 4.4:+25392634 | MS.gene008730:CDS |
| GGTTGACCGTTCTGGAATGG+AGG | 0.551650 | 4.4:-25390320 | None:intergenic |
| AATGCAGCTACATGAGAAGC+AGG | 0.553166 | 4.4:-25391508 | None:intergenic |
| CCAAGGCTTCAAGTTGACAA+TGG | 0.565390 | 4.4:+25393428 | MS.gene008730:CDS |
| ACAACAGATGGGGTGCATGA+AGG | 0.565598 | 4.4:+25391879 | MS.gene008730:CDS |
| TGCAGCTGCTATTCAGGCAG+AGG | 0.568714 | 4.4:+25394327 | MS.gene008730:CDS |
| TATACTACCTGACAACAGAT+GGG | 0.573112 | 4.4:+25391868 | MS.gene008730:CDS |
| GTTGACCGTTCTGGAATGGA+GGG | 0.578391 | 4.4:-25390319 | None:intergenic |
| TGATGGATCTTTGCTTATGG+TGG | 0.578520 | 4.4:+25390391 | MS.gene008730:CDS |
| GTCCTTACAACACTATCCGA+TGG | 0.588625 | 4.4:+25392622 | MS.gene008730:CDS |
| GCTGCAGTCTTAGCATGCGG+TGG | 0.596595 | 4.4:-25394310 | None:intergenic |
| CAAGTGAATGGTCTCCAGAT+GGG | 0.601629 | 4.4:+25393378 | MS.gene008730:CDS |
| ATTATTTGGCAGGGAAAGAG+GGG | 0.604036 | 4.4:+25392000 | MS.gene008730:intron |
| ATGCCGTGTGCCAACTAATG+AGG | 0.604069 | 4.4:+25391396 | MS.gene008730:CDS |
| AGCATGCGGTGGACGATATG+CGG | 0.604885 | 4.4:-25394299 | None:intergenic |
| TCAAGTGAATGGTCTCCAGA+TGG | 0.615111 | 4.4:+25393377 | MS.gene008730:CDS |
| CCAGTTCCAAGCTCCAGTAG+AGG | 0.620222 | 4.4:-25392600 | None:intergenic |
| ATTAGTTGGCACACGGCATG+CGG | 0.625309 | 4.4:-25391392 | None:intergenic |
| AAACTCAACCTATGGCTCGA+CGG | 0.625537 | 4.4:+25391727 | MS.gene008730:CDS |
| TTCAACTGGACTTCTAATTG+TGG | 0.628741 | 4.4:+25391794 | MS.gene008730:CDS |
| GATGTTTGACAAGTTATACC+AGG | 0.635363 | 4.4:+25393935 | MS.gene008730:CDS |
| ACATTATGGAAGATTGAGAC+TGG | 0.641864 | 4.4:+25390569 | MS.gene008730:CDS |
| TGACAGCAACAACAGCTCCA+AGG | 0.647896 | 4.4:+25393411 | MS.gene008730:CDS |
| GGAGAACATACCATATCACC+AGG | 0.651350 | 4.4:-25392910 | None:intergenic |
| GCAGCTGCAGTCTTAGCATG+CGG | 0.651643 | 4.4:-25394313 | None:intergenic |
| GCACCTCATTAGTTGGCACA+CGG | 0.654957 | 4.4:-25391399 | None:intergenic |
| GAAACAGCTTGCATCAACCA+AGG | 0.668592 | 4.4:+25393340 | MS.gene008730:CDS |
| TTCTCAGAAGAATATGACAA+GGG | 0.672557 | 4.4:+25390610 | MS.gene008730:CDS |
| ATTCTCAGAAGAATATGACA+AGG | 0.693333 | 4.4:+25390609 | MS.gene008730:CDS |
| ACTGGCCCTCCATTCCAGAA+CGG | 0.694693 | 4.4:+25390314 | MS.gene008730:CDS |
| ATACTACCTGACAACAGATG+GGG | 0.704485 | 4.4:+25391869 | MS.gene008730:CDS |
| AGGTGATATAGAAAGCTCAG+CGG | 0.737636 | 4.4:-25391488 | None:intergenic |
| GTTTGCAAATAAGTTCCGCG+AGG | 0.750889 | 4.4:-25390509 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAACATAGAT+AGG | - | chr4.4:25390229-25390248 | None:intergenic | 10.0% |
| !!! | ATCATAATTTTATTTTCTAT+CGG | - | chr4.4:25393035-25393054 | None:intergenic | 10.0% |
| !!! | GATTTTTTGTTTTAATTATT+TGG | + | chr4.4:25391986-25392005 | MS.gene008730:intron | 10.0% |
| !! | AACATAATAATTTAATCAGT+CGG | - | chr4.4:25392935-25392954 | None:intergenic | 15.0% |
| !! | CAACATTAAAAAAAAAAGTT+TGG | + | chr4.4:25393154-25393173 | MS.gene008730:intron | 15.0% |
| !! | TAATAAAATCTATTGATCTA+TGG | - | chr4.4:25393585-25393604 | None:intergenic | 15.0% |
| !! | TATTAATAAAAAACTATGCA+GGG | - | chr4.4:25392416-25392435 | None:intergenic | 15.0% |
| !!! | AAAATTTTATCTTTTAAGAC+CGG | + | chr4.4:25390728-25390747 | MS.gene008730:intron | 15.0% |
| !!! | ATAAACAATTGAATATTTTC+AGG | - | chr4.4:25393492-25393511 | None:intergenic | 15.0% |
| !!! | ATAATTGAAGTTTTTATTTC+TGG | + | chr4.4:25393189-25393208 | MS.gene008730:intron | 15.0% |
| !!! | TAAACAATTGAATATTTTCA+GGG | - | chr4.4:25393491-25393510 | None:intergenic | 15.0% |
| !!! | TCATAATTTTATTTTCTATC+GGG | - | chr4.4:25393034-25393053 | None:intergenic | 15.0% |
| !! | AAATATCAAAATTCAAAAGC+AGG | - | chr4.4:25392139-25392158 | None:intergenic | 20.0% |
| !! | AAGAAACTTAAAACAAAGAA+AGG | - | chr4.4:25394624-25394643 | None:intergenic | 20.0% |
| !! | AATGGAAAGGAAAAAAAAAA+AGG | - | chr4.4:25392506-25392525 | None:intergenic | 20.0% |
| !! | AATGTTGAAAATAACGTTTA+TGG | - | chr4.4:25393141-25393160 | None:intergenic | 20.0% |
| !! | AATTGTTTATCTTTATCCAT+GGG | + | chr4.4:25393502-25393521 | MS.gene008730:intron | 20.0% |
| !! | ACATAATAATTTAATCAGTC+GGG | - | chr4.4:25392934-25392953 | None:intergenic | 20.0% |
| !! | AGAAACTTAAAACAAAGAAA+GGG | - | chr4.4:25394623-25394642 | None:intergenic | 20.0% |
| !! | AGAAAGAAAAAAAAAACTCA+TGG | - | chr4.4:25392709-25392728 | None:intergenic | 20.0% |
| !! | ATAACAATTAGAACATACTA+AGG | - | chr4.4:25391914-25391933 | None:intergenic | 20.0% |
| !! | ATATATAGTAATGACAGAAT+TGG | - | chr4.4:25390423-25390442 | None:intergenic | 20.0% |
| !! | ATGAAATATTAGAATAAGCA+TGG | - | chr4.4:25394152-25394171 | None:intergenic | 20.0% |
| !! | CTATTAATAAAAAACTATGC+AGG | - | chr4.4:25392417-25392436 | None:intergenic | 20.0% |
| !! | GAAAGAAAAAAAAAACTCAT+GGG | - | chr4.4:25392708-25392727 | None:intergenic | 20.0% |
| !! | GGAAAAAAAAAAAGGATTAA+AGG | - | chr4.4:25392498-25392517 | None:intergenic | 20.0% |
| !! | TAACAATTAGAACATACTAA+GGG | - | chr4.4:25391913-25391932 | None:intergenic | 20.0% |
| !! | TATATGTGATATGTTCAATA+TGG | + | chr4.4:25392090-25392109 | MS.gene008730:intron | 20.0% |
| !! | TTGAACATATCACATATAAA+AGG | - | chr4.4:25392088-25392107 | None:intergenic | 20.0% |
| !!! | AAGATGACTTTATTGTTTTT+TGG | + | chr4.4:25392234-25392253 | MS.gene008730:intron | 20.0% |
| !!! | AATTTAAAATAGAAACAGTG+AGG | - | chr4.4:25394377-25394396 | None:intergenic | 20.0% |
| !!! | AGATGACTTTATTGTTTTTT+GGG | + | chr4.4:25392235-25392254 | MS.gene008730:intron | 20.0% |
| !!! | ATCAAGATTTTTCACTATAA+TGG | + | chr4.4:25393894-25393913 | MS.gene008730:CDS | 20.0% |
| !!! | ATTTAAAATAGAAACAGTGA+GGG | - | chr4.4:25394376-25394395 | None:intergenic | 20.0% |
| !!! | CATAATTTTATTTTCTATCG+GGG | - | chr4.4:25393033-25393052 | None:intergenic | 20.0% |
| !!! | TCAAGATTTTTCACTATAAT+GGG | + | chr4.4:25393895-25393914 | MS.gene008730:CDS | 20.0% |
| !!! | TGATATAAAGTATCTAAATC+AGG | + | chr4.4:25392810-25392829 | MS.gene008730:intron | 20.0% |
| !!! | TTAATTTGATGACATTTATG+AGG | + | chr4.4:25393760-25393779 | MS.gene008730:intron | 20.0% |
| !!! | TTTCTCTTTTAAATCTAAGA+AGG | + | chr4.4:25392733-25392752 | MS.gene008730:intron | 20.0% |
| !!! | TTTGGGACTTTATTTTTTTT+GGG | + | chr4.4:25392252-25392271 | MS.gene008730:intron | 20.0% |
| !!! | TTTGTTTTAATTATTTGGCA+GGG | + | chr4.4:25391991-25392010 | MS.gene008730:intron | 20.0% |
| !!! | TTTTGGGACTTTATTTTTTT+TGG | + | chr4.4:25392251-25392270 | MS.gene008730:intron | 20.0% |
| !!! | TTTTGTTTTAATTATTTGGC+AGG | + | chr4.4:25391990-25392009 | MS.gene008730:intron | 20.0% |
| ! | AAAACAAATCAGAGTTACTA+TGG | + | chr4.4:25391834-25391853 | MS.gene008730:CDS | 25.0% |
| ! | AAACTCATTCAAGAATTCTA+GGG | - | chr4.4:25394514-25394533 | None:intergenic | 25.0% |
| ! | AACAATTAGAACATACTAAG+GGG | - | chr4.4:25391912-25391931 | None:intergenic | 25.0% |
| ! | AAGATAAGAATGTCACATTA+TGG | + | chr4.4:25390555-25390574 | MS.gene008730:CDS | 25.0% |
| ! | AATGAAAAATGCTTTCTTAG+TGG | - | chr4.4:25393848-25393867 | None:intergenic | 25.0% |
| ! | ACTTTATCAAGTTTGACATT+CGG | - | chr4.4:25390344-25390363 | None:intergenic | 25.0% |
| ! | ATAATTCAACATTCTCATAG+TGG | - | chr4.4:25393083-25393102 | None:intergenic | 25.0% |
| ! | CAATTGTTTATCTTTATCCA+TGG | + | chr4.4:25393501-25393520 | MS.gene008730:intron | 25.0% |
| ! | GAAAATAAACATCCAACAAA+TGG | - | chr4.4:25392524-25392543 | None:intergenic | 25.0% |
| ! | TAAAGTCATCTTGCAAAAAT+TGG | - | chr4.4:25392226-25392245 | None:intergenic | 25.0% |
| ! | TATATTTGATTGCAATCACT+TGG | + | chr4.4:25393663-25393682 | MS.gene008730:intron | 25.0% |
| ! | TCACTTGGTTATATATAACT+TGG | + | chr4.4:25393678-25393697 | MS.gene008730:intron | 25.0% |
| ! | TTTAAAGAAGAACTGATGAT+TGG | + | chr4.4:25391936-25391955 | MS.gene008730:intron | 25.0% |
| ! | TTTACGAAACAAGAAAAAGA+GGG | + | chr4.4:25394707-25394726 | MS.gene008730:CDS | 25.0% |
| !! | ACTGCAAATACAAATCATTT+TGG | - | chr4.4:25394562-25394581 | None:intergenic | 25.0% |
| !! | GAATTGATGCTATTGTTATT+TGG | + | chr4.4:25391606-25391625 | MS.gene008730:intron | 25.0% |
| !! | TTTTGTTCTTTTTCCATTGA+AGG | + | chr4.4:25393871-25393890 | MS.gene008730:intron | 25.0% |
| !!! | AGTAGTTTTACTCTTAATAG+TGG | + | chr4.4:25394452-25394471 | MS.gene008730:intron | 25.0% |
| !!! | ATTTTTCATTTTGCTGTTCT+AGG | + | chr4.4:25393295-25393314 | MS.gene008730:intron | 25.0% |
| !!! | GGCTTTTAAAATCATATACA+AGG | - | chr4.4:25392365-25392384 | None:intergenic | 25.0% |
| !!! | TTTCTTTGTTTTTTCCTTTC+TGG | + | chr4.4:25392954-25392973 | MS.gene008730:intron | 25.0% |
| !!! | TTTTTTTCCTTTCCATTTGT+TGG | + | chr4.4:25392509-25392528 | MS.gene008730:intron | 25.0% |
| AAAAATTGCACCTCATTAGT+TGG | - | chr4.4:25391409-25391428 | None:intergenic | 30.0% | |
| AAAATTCCATGAACCATTGT+AGG | + | chr4.4:25391659-25391678 | MS.gene008730:intron | 30.0% | |
| AAATTCCATGAACCATTGTA+GGG | + | chr4.4:25391660-25391679 | MS.gene008730:intron | 30.0% | |
| AACCATGATTCCATTTAAGT+TGG | - | chr4.4:25391776-25391795 | None:intergenic | 30.0% | |
| AACTTAAAACAAAGAAAGGG+AGG | - | chr4.4:25394620-25394639 | None:intergenic | 30.0% | |
| AATATCACAAGCAATTCTCA+TGG | + | chr4.4:25393112-25393131 | MS.gene008730:intron | 30.0% | |
| AATGCTAAATTCAGTGATGA+TGG | + | chr4.4:25390374-25390393 | MS.gene008730:CDS | 30.0% | |
| ACAAGCAAAAATTTGTACAC+TGG | - | chr4.4:25391694-25391713 | None:intergenic | 30.0% | |
| ACTTAAAACAAAGAAAGGGA+GGG | - | chr4.4:25394619-25394638 | None:intergenic | 30.0% | |
| AGTAAGAAGAGTAAATCAGA+TGG | + | chr4.4:25390955-25390974 | MS.gene008730:intron | 30.0% | |
| ATAAAACTGCAAAACAGTCA+AGG | - | chr4.4:25392867-25392886 | None:intergenic | 30.0% | |
| ATGAATCAGAAAACATGCTA+TGG | + | chr4.4:25393789-25393808 | MS.gene008730:intron | 30.0% | |
| ATTCAACGATACATACCAAT+TGG | - | chr4.4:25390636-25390655 | None:intergenic | 30.0% | |
| ATTCTCAGAAGAATATGACA+AGG | + | chr4.4:25390609-25390628 | MS.gene008730:CDS | 30.0% | |
| CAAACTCATTCAAGAATTCT+AGG | - | chr4.4:25394515-25394534 | None:intergenic | 30.0% | |
| CTTGAAGATAAAAAACCATC+AGG | + | chr4.4:25394119-25394138 | MS.gene008730:CDS | 30.0% | |
| CTTTACGAAACAAGAAAAAG+AGG | + | chr4.4:25394706-25394725 | MS.gene008730:CDS | 30.0% | |
| GAAAAATCTTGATCCTTCAA+TGG | - | chr4.4:25393887-25393906 | None:intergenic | 30.0% | |
| GACAGTTAAAACATAAGTCA+TGG | - | chr4.4:25391322-25391341 | None:intergenic | 30.0% | |
| GACCTAAAATAATCAACCAT+TGG | - | chr4.4:25394672-25394691 | None:intergenic | 30.0% | |
| GATAGGATTATAAAGATTGG+GGG | + | chr4.4:25390880-25390899 | MS.gene008730:intron | 30.0% | |
| GATATTTGCTTAAGATACCA+GGG | + | chr4.4:25392152-25392171 | MS.gene008730:intron | 30.0% | |
| GATTTGTATTTGCAGTTGTT+AGG | + | chr4.4:25394566-25394585 | MS.gene008730:intron | 30.0% | |
| GGATAGGATTATAAAGATTG+GGG | + | chr4.4:25390879-25390898 | MS.gene008730:intron | 30.0% | |
| GGCATAACTAAAACATGTTA+AGG | - | chr4.4:25392546-25392565 | None:intergenic | 30.0% | |
| GGGATAGGATTATAAAGATT+GGG | + | chr4.4:25390878-25390897 | MS.gene008730:intron | 30.0% | |
| GTAACACTGCTAAAGAAATT+AGG | + | chr4.4:25390447-25390466 | MS.gene008730:CDS | 30.0% | |
| TAAAACTGCAAAACAGTCAA+GGG | - | chr4.4:25392866-25392885 | None:intergenic | 30.0% | |
| TAAACATCCAACAAATGGAA+AGG | - | chr4.4:25392519-25392538 | None:intergenic | 30.0% | |
| TATAAAGATTGGGGGAAAAT+AGG | + | chr4.4:25390888-25390907 | MS.gene008730:intron | 30.0% | |
| TGAATCAGAAAACATGCTAT+GGG | + | chr4.4:25393790-25393809 | MS.gene008730:intron | 30.0% | |
| TGATATTTGCTTAAGATACC+AGG | + | chr4.4:25392151-25392170 | MS.gene008730:intron | 30.0% | |
| TGGGATAGGATTATAAAGAT+TGG | + | chr4.4:25390877-25390896 | MS.gene008730:intron | 30.0% | |
| TGGTATGTATCGTTGAATTA+TGG | + | chr4.4:25390638-25390657 | MS.gene008730:intron | 30.0% | |
| TTCTCAGAAGAATATGACAA+GGG | + | chr4.4:25390610-25390629 | MS.gene008730:CDS | 30.0% | |
| TTTGAAAATAACAGTAGAGC+TGG | + | chr4.4:25392303-25392322 | MS.gene008730:intron | 30.0% | |
| TTTGATTACTATTCGAAAGC+AGG | + | chr4.4:25392180-25392199 | MS.gene008730:intron | 30.0% | |
| ! | ACAAAATAAAAGCAGCCTTT+TGG | - | chr4.4:25393561-25393580 | None:intergenic | 30.0% |
| ! | ACCATGATTCCATTTAAGTT+GGG | - | chr4.4:25391775-25391794 | None:intergenic | 30.0% |
| ! | AGTGTACAAATTTTTGCTTG+TGG | + | chr4.4:25391693-25391712 | MS.gene008730:CDS | 30.0% |
| ! | GAAGATATTTTGTGCTTGAT+TGG | + | chr4.4:25392979-25392998 | MS.gene008730:intron | 30.0% |
| ! | TGCCAATGGTTGATTATTTT+AGG | + | chr4.4:25394667-25394686 | MS.gene008730:intron | 30.0% |
| ! | TTTCTAAAGGAGTTGTTTGT+CGG | + | chr4.4:25391443-25391462 | MS.gene008730:CDS | 30.0% |
| !! | CTGTTTTGCAGTTTTATGTT+TGG | + | chr4.4:25392870-25392889 | MS.gene008730:intron | 30.0% |
| !! | TACCATCACTTTTATCAGAT+TGG | + | chr4.4:25393056-25393075 | MS.gene008730:intron | 30.0% |
| !!! | ATTCTGTTTTGAAATGCCAA+TGG | + | chr4.4:25394653-25394672 | MS.gene008730:intron | 30.0% |
| !!! | GAAAGTTTTAGACTTAGATC+AGG | + | chr4.4:25392274-25392293 | MS.gene008730:intron | 30.0% |
| !!! | TATTTTGGGATTACGTAGAA+AGG | + | chr4.4:25393318-25393337 | MS.gene008730:CDS | 30.0% |
| !!! | TTCTGTTTGTTTTAGTTCGA+CGG | + | chr4.4:25390270-25390289 | MS.gene008730:intron | 30.0% |
| !!! | TTTGCTGTTCTAGGTATTTT+GGG | + | chr4.4:25393304-25393323 | MS.gene008730:intron | 30.0% |
| !!! | TTTTCAAGTTCCTAATCTTG+TGG | + | chr4.4:25390472-25390491 | MS.gene008730:CDS | 30.0% |
| !!! | TTTTGCTGTTCTAGGTATTT+TGG | + | chr4.4:25393303-25393322 | MS.gene008730:intron | 30.0% |
| AAAAATCGTTATCGTCGTTG+TGG | - | chr4.4:25391973-25391992 | None:intergenic | 35.0% | |
| AAAACAGAAGCCACAAGATT+AGG | - | chr4.4:25390485-25390504 | None:intergenic | 35.0% | |
| AAAATAGGCTTAGGTGGTTT+GGG | + | chr4.4:25390903-25390922 | MS.gene008730:intron | 35.0% | |
| AAACATTCCAAAAACCTTCC+GGG | + | chr4.4:25390528-25390547 | MS.gene008730:CDS | 35.0% | |
| AAACCAAATAGGCTTAGTCT+TGG | - | chr4.4:25391119-25391138 | None:intergenic | 35.0% | |
| AAATGGAATCATGGTTCAAC+TGG | + | chr4.4:25391780-25391799 | MS.gene008730:CDS | 35.0% | |
| AAGAAGAGTAAATCAGATGG+AGG | + | chr4.4:25390958-25390977 | MS.gene008730:intron | 35.0% | |
| AATTATTTGGCAGGGAAAGA+GGG | + | chr4.4:25391999-25392018 | MS.gene008730:intron | 35.0% | |
| AATTCCATGAACCATTGTAG+GGG | + | chr4.4:25391661-25391680 | MS.gene008730:intron | 35.0% | |
| ACATTATGGAAGATTGAGAC+TGG | + | chr4.4:25390569-25390588 | MS.gene008730:CDS | 35.0% | |
| ACCCAACTTAAATGGAATCA+TGG | + | chr4.4:25391771-25391790 | MS.gene008730:CDS | 35.0% | |
| AGTGTAAGATGTCATCCAAA+AGG | + | chr4.4:25393543-25393562 | MS.gene008730:intron | 35.0% | |
| ATGGCATCTCTTGAGATATT+AGG | + | chr4.4:25390175-25390194 | MS.gene008730:CDS | 35.0% | |
| ATTGGCTAAATTAGGACTAC+TGG | + | chr4.4:25392997-25393016 | MS.gene008730:intron | 35.0% | |
| ATTGTGTGCAAACTATTTGC+AGG | + | chr4.4:25394022-25394041 | MS.gene008730:intron | 35.0% | |
| ATTTCAGCAATAAGTTCGCA+TGG | + | chr4.4:25394407-25394426 | MS.gene008730:intron | 35.0% | |
| CAAAATATCTTCCACCAGAA+AGG | - | chr4.4:25392971-25392990 | None:intergenic | 35.0% | |
| CAAACATTCCAAAAACCTTC+CGG | + | chr4.4:25390527-25390546 | MS.gene008730:CDS | 35.0% | |
| CACGTATTCTCAAACCAAAT+AGG | - | chr4.4:25391130-25391149 | None:intergenic | 35.0% | |
| CATCTCTTGAGATATTAGGT+AGG | + | chr4.4:25390179-25390198 | MS.gene008730:intron | 35.0% | |
| CCATTTCCTTGACAAATCTT+CGG | - | chr4.4:25391218-25391237 | None:intergenic | 35.0% | |
| GACCAATCTGATAAAAGTGA+TGG | - | chr4.4:25393061-25393080 | None:intergenic | 35.0% | |
| GATGTTTGACAAGTTATACC+AGG | + | chr4.4:25393935-25393954 | MS.gene008730:CDS | 35.0% | |
| GTGATGTCACCAAATTTACT+TGG | - | chr4.4:25394068-25394087 | None:intergenic | 35.0% | |
| GTTCTACAACCCAACTTAAA+TGG | + | chr4.4:25391763-25391782 | MS.gene008730:CDS | 35.0% | |
| GTTGTATGGAACATTGTGTT+GGG | + | chr4.4:25390755-25390774 | MS.gene008730:intron | 35.0% | |
| TAAGTCATGGTGAGAATGTT+AGG | - | chr4.4:25391309-25391328 | None:intergenic | 35.0% | |
| TAATTATTTGGCAGGGAAAG+AGG | + | chr4.4:25391998-25392017 | MS.gene008730:intron | 35.0% | |
| TATACTACCTGACAACAGAT+GGG | + | chr4.4:25391868-25391887 | MS.gene008730:CDS | 35.0% | |
| TGTCAATGTATCTCTTGTTC+AGG | + | chr4.4:25391338-25391357 | MS.gene008730:intron | 35.0% | |
| TGTTGTATGGAACATTGTGT+TGG | + | chr4.4:25390754-25390773 | MS.gene008730:intron | 35.0% | |
| TTATACTACCTGACAACAGA+TGG | + | chr4.4:25391867-25391886 | MS.gene008730:CDS | 35.0% | |
| TTCAACTGGACTTCTAATTG+TGG | + | chr4.4:25391794-25391813 | MS.gene008730:CDS | 35.0% | |
| TTGTTTCCGAAGATTTGTCA+AGG | + | chr4.4:25391209-25391228 | MS.gene008730:intron | 35.0% | |
| ! | AACCAAATAGGCTTAGTCTT+GGG | - | chr4.4:25391118-25391137 | None:intergenic | 35.0% |
| ! | AATGTTTTCTCAAACCAACC+AGG | + | chr4.4:25391282-25391301 | MS.gene008730:intron | 35.0% |
| ! | CAAAGATGAGAATGTTGCTT+TGG | + | chr4.4:25390836-25390855 | MS.gene008730:intron | 35.0% |
| ! | GATACTGGGGATTTTTCTAA+AGG | + | chr4.4:25391430-25391449 | MS.gene008730:CDS | 35.0% |
| ! | GATGTATTTTCACATGACAC+AGG | + | chr4.4:25393221-25393240 | MS.gene008730:intron | 35.0% |
| ! | TAAGTTGGGTTGTAGAACAT+TGG | - | chr4.4:25391761-25391780 | None:intergenic | 35.0% |
| ! | TGAGGATACATTTCCCTTTT+GGG | - | chr4.4:25392650-25392669 | None:intergenic | 35.0% |
| ! | TGTGCTTGATTGGCTAAATT+AGG | + | chr4.4:25392989-25393008 | MS.gene008730:intron | 35.0% |
| ! | TTTTTGTCACCAAACGAATG+AGG | + | chr4.4:25391584-25391603 | MS.gene008730:intron | 35.0% |
| !! | AGGTGCAATTTTTCGATACT+GGG | + | chr4.4:25391416-25391435 | MS.gene008730:CDS | 35.0% |
| !! | TAGAGTTTGCTGTTGTGTAT+GGG | + | chr4.4:25392057-25392076 | MS.gene008730:CDS | 35.0% |
| !! | TGATGATGGATCTTTGCTTA+TGG | + | chr4.4:25390388-25390407 | MS.gene008730:CDS | 35.0% |
| !! | TTAGAGTTTGCTGTTGTGTA+TGG | + | chr4.4:25392056-25392075 | MS.gene008730:CDS | 35.0% |
| !! | TTTGCAGTTTTATGTTTGGC+TGG | + | chr4.4:25392874-25392893 | MS.gene008730:intron | 35.0% |
| !!! | CTTTGTTTTTTCCTTTCTGG+TGG | + | chr4.4:25392957-25392976 | MS.gene008730:intron | 35.0% |
| AAACAAAGAAAGGGAGGGAA+AGG | - | chr4.4:25394614-25394633 | None:intergenic | 40.0% | |
| AAATCTAAGAAGGACCCTTG+AGG | + | chr4.4:25392743-25392762 | MS.gene008730:intron | 40.0% | |
| AATCTAAGAAGGACCCTTGA+GGG | + | chr4.4:25392744-25392763 | MS.gene008730:intron | 40.0% | |
| AATGGTCTGTGTCAAGTGAA+TGG | + | chr4.4:25393366-25393385 | MS.gene008730:CDS | 40.0% | |
| AATGTATCTCTTGTTCAGGC+CGG | + | chr4.4:25391342-25391361 | MS.gene008730:intron | 40.0% | |
| AATGTTCCATACAACATCGC+CGG | - | chr4.4:25390750-25390769 | None:intergenic | 40.0% | |
| AGAATATGACAAGGGCCAAT+TGG | + | chr4.4:25390618-25390637 | MS.gene008730:CDS | 40.0% | |
| AGGGAATATCTAGTCCAGTT+GGG | - | chr4.4:25392397-25392416 | None:intergenic | 40.0% | |
| AGGTGATATAGAAAGCTCAG+CGG | - | chr4.4:25391491-25391510 | None:intergenic | 40.0% | |
| ATACTACCTGACAACAGATG+GGG | + | chr4.4:25391869-25391888 | MS.gene008730:CDS | 40.0% | |
| ATAGTAATCAAACCAAGCCC+TGG | - | chr4.4:25392172-25392191 | None:intergenic | 40.0% | |
| ATCAGAAAACATGCTATGGG+AGG | + | chr4.4:25393793-25393812 | MS.gene008730:intron | 40.0% | |
| ATGCAATGACATCTGCGAAA+AGG | - | chr4.4:25394004-25394023 | None:intergenic | 40.0% | |
| ATTATTTGGCAGGGAAAGAG+GGG | + | chr4.4:25392000-25392019 | MS.gene008730:intron | 40.0% | |
| ATTCCATGAACCATTGTAGG+GGG | + | chr4.4:25391662-25391681 | MS.gene008730:intron | 40.0% | |
| ATTTGGCACGCTGTGATTTA+GGG | + | chr4.4:25391623-25391642 | MS.gene008730:intron | 40.0% | |
| CAAACTATTTGCAGGCTGAT+TGG | + | chr4.4:25394030-25394049 | MS.gene008730:intron | 40.0% | |
| CCAGAGTCACCAAGTAAATT+TGG | + | chr4.4:25394056-25394075 | MS.gene008730:CDS | 40.0% | |
| CCGAAGATTTGTCAAGGAAA+TGG | + | chr4.4:25391215-25391234 | MS.gene008730:intron | 40.0% | |
| CTAAGTCTCCATGATTGTTG+AGG | - | chr4.4:25391559-25391578 | None:intergenic | 40.0% | |
| CTTATCCCATTGAGTAGCAT+CGG | - | chr4.4:25391038-25391057 | None:intergenic | 40.0% | |
| CTTGACCTGCAAAAAGTTCA+TGG | - | chr4.4:25394216-25394235 | None:intergenic | 40.0% | |
| GAAAAAGAGGGAGAAACAGA+AGG | + | chr4.4:25394719-25394738 | MS.gene008730:CDS | 40.0% | |
| GAAAATAGGCTTAGGTGGTT+TGG | + | chr4.4:25390902-25390921 | MS.gene008730:intron | 40.0% | |
| GACCATTGAGCATCATGAAT+AGG | - | chr4.4:25392026-25392045 | None:intergenic | 40.0% | |
| GATGCTCAATGGTCAAATTC+AGG | + | chr4.4:25392032-25392051 | MS.gene008730:CDS | 40.0% | |
| GATGTGTGATAGGACTAGAT+GGG | + | chr4.4:25390858-25390877 | MS.gene008730:intron | 40.0% | |
| GCAAAAATTTGTACACTGGC+AGG | - | chr4.4:25391690-25391709 | None:intergenic | 40.0% | |
| GCAAACATTTGCTTCGTATG+AGG | + | chr4.4:25393263-25393282 | MS.gene008730:intron | 40.0% | |
| GCATCAATTCCTCATTCGTT+TGG | - | chr4.4:25391596-25391615 | None:intergenic | 40.0% | |
| GGAGAAACAGAAGGAGAAAA+AGG | + | chr4.4:25394728-25394747 | MS.gene008730:CDS | 40.0% | |
| GGATAGACATATGTAACCAG+AGG | + | chr4.4:25390979-25390998 | MS.gene008730:intron | 40.0% | |
| TATTTGGCACGCTGTGATTT+AGG | + | chr4.4:25391622-25391641 | MS.gene008730:intron | 40.0% | |
| TCAATGGGATAAGGCTTAGT+TGG | + | chr4.4:25391045-25391064 | MS.gene008730:intron | 40.0% | |
| TCAGAGCTGAATTGAATTGC+CGG | - | chr4.4:25391364-25391383 | None:intergenic | 40.0% | |
| TGATTCCAAATCATCAGCTG+AGG | - | chr4.4:25392668-25392687 | None:intergenic | 40.0% | |
| TGCATTTGTTCCAGAATCCA+AGG | + | chr4.4:25391525-25391544 | MS.gene008730:CDS | 40.0% | |
| TGTATCCTCAGCTGATGATT+TGG | + | chr4.4:25392660-25392679 | MS.gene008730:intron | 40.0% | |
| TTCCATCGGATAGTGTTGTA+AGG | - | chr4.4:25392627-25392646 | None:intergenic | 40.0% | |
| ! | ATGGGAGGATATTTTGCTGA+TGG | + | chr4.4:25393808-25393827 | MS.gene008730:intron | 40.0% |
| ! | CAAGGATTGGAACTTTGAAG+AGG | + | chr4.4:25392774-25392793 | MS.gene008730:intron | 40.0% |
| ! | CATGAACTTTTTGCAGGTCA+AGG | + | chr4.4:25394214-25394233 | MS.gene008730:intron | 40.0% |
| ! | CCAAATTTACTTGGTGACTC+TGG | - | chr4.4:25394059-25394078 | None:intergenic | 40.0% |
| ! | CTGAGGATACATTTCCCTTT+TGG | - | chr4.4:25392651-25392670 | None:intergenic | 40.0% |
| ! | GAAGACCATGAACTTTTTGC+AGG | + | chr4.4:25394208-25394227 | MS.gene008730:intron | 40.0% |
| ! | TCAAACAGAGTTGCTTTAGC+AGG | - | chr4.4:25392567-25392586 | None:intergenic | 40.0% |
| ! | TGATGGATCTTTGCTTATGG+TGG | + | chr4.4:25390391-25390410 | MS.gene008730:CDS | 40.0% |
| !! | CAAGGCTTCAAGTTGACAAT+GGG | + | chr4.4:25393429-25393448 | MS.gene008730:CDS | 40.0% |
| !! | GAGGTGCAATTTTTCGATAC+TGG | + | chr4.4:25391415-25391434 | MS.gene008730:CDS | 40.0% |
| !! | GGTGCAATTTTTCGATACTG+GGG | + | chr4.4:25391417-25391436 | MS.gene008730:CDS | 40.0% |
| !! | TGTTGCTTTGGATGTGTGAT+AGG | + | chr4.4:25390848-25390867 | MS.gene008730:intron | 40.0% |
| !!! | ATTTCCCTTTTGGGTTCCAT+CGG | - | chr4.4:25392641-25392660 | None:intergenic | 40.0% |
| !!! | GTTTTATGTTTGGCTGGCTT+CGG | + | chr4.4:25392880-25392899 | MS.gene008730:intron | 40.0% |
| AAACTCAACCTATGGCTCGA+CGG | + | chr4.4:25391727-25391746 | MS.gene008730:CDS | 45.0% | |
| AAGCATGGCAAAGAACCTGA+TGG | - | chr4.4:25394137-25394156 | None:intergenic | 45.0% | |
| AAGCCATAACGATACCCAAC+TGG | + | chr4.4:25392380-25392399 | MS.gene008730:intron | 45.0% | |
| AATGCAGCTACATGAGAAGC+AGG | - | chr4.4:25391511-25391530 | None:intergenic | 45.0% | |
| ACATATGTAACCAGAGGCAG+AGG | + | chr4.4:25390985-25391004 | MS.gene008730:intron | 45.0% | |
| ACTATCCGATGGAACCCAAA+AGG | + | chr4.4:25392633-25392652 | MS.gene008730:CDS | 45.0% | |
| AGTTCGAGATACTACTGACC+TGG | - | chr4.4:25393956-25393975 | None:intergenic | 45.0% | |
| ATGGGTATGTTTGTCCACTG+TGG | + | chr4.4:25393447-25393466 | MS.gene008730:intron | 45.0% | |
| ATGGTGAGAATGTTAGGACC+TGG | - | chr4.4:25391303-25391322 | None:intergenic | 45.0% | |
| ATGTAGCCGATGCTACTCAA+TGG | + | chr4.4:25391029-25391048 | MS.gene008730:intron | 45.0% | |
| CAAGTGAATGGTCTCCAGAT+GGG | + | chr4.4:25393378-25393397 | MS.gene008730:CDS | 45.0% | |
| CAGGGAATATCTAGTCCAGT+TGG | - | chr4.4:25392398-25392417 | None:intergenic | 45.0% | |
| CCATTGTCAACTTGAAGCCT+TGG | - | chr4.4:25393431-25393450 | None:intergenic | 45.0% | |
| CGATGCTACTCAATGGGATA+AGG | + | chr4.4:25391036-25391055 | MS.gene008730:intron | 45.0% | |
| CTATCCGATGGAACCCAAAA+GGG | + | chr4.4:25392634-25392653 | MS.gene008730:CDS | 45.0% | |
| CTATTCGAAAGCAGGACTTG+TGG | + | chr4.4:25392188-25392207 | MS.gene008730:intron | 45.0% | |
| GAAACAGCTTGCATCAACCA+AGG | + | chr4.4:25393340-25393359 | MS.gene008730:CDS | 45.0% | |
| GAAGAATGCTCACTATGGAC+TGG | + | chr4.4:25390296-25390315 | MS.gene008730:CDS | 45.0% | |
| GACATTCTTATCTTGCTGCC+CGG | - | chr4.4:25390549-25390568 | None:intergenic | 45.0% | |
| GATTGGGGGAAAATAGGCTT+AGG | + | chr4.4:25390894-25390913 | MS.gene008730:intron | 45.0% | |
| GGAGAACATACCATATCACC+AGG | - | chr4.4:25392913-25392932 | None:intergenic | 45.0% | |
| GGATGTGTGATAGGACTAGA+TGG | + | chr4.4:25390857-25390876 | MS.gene008730:intron | 45.0% | |
| GGCCTATTCATGATGCTCAA+TGG | + | chr4.4:25392021-25392040 | MS.gene008730:CDS | 45.0% | |
| GTCATGAAATAGCACCCATC+TGG | - | chr4.4:25393395-25393414 | None:intergenic | 45.0% | |
| GTCCATAGTGAGCATTCTTC+CGG | - | chr4.4:25390296-25390315 | None:intergenic | 45.0% | |
| GTCCTTACAACACTATCCGA+TGG | + | chr4.4:25392622-25392641 | MS.gene008730:CDS | 45.0% | |
| GTGATAGGACTAGATGGGAT+AGG | + | chr4.4:25390863-25390882 | MS.gene008730:intron | 45.0% | |
| GTTTGCAAATAAGTTCCGCG+AGG | - | chr4.4:25390512-25390531 | None:intergenic | 45.0% | |
| TAAGACTGCAGCTGCTATTC+AGG | + | chr4.4:25394321-25394340 | MS.gene008730:CDS | 45.0% | |
| TCAAGTGAATGGTCTCCAGA+TGG | + | chr4.4:25393377-25393396 | MS.gene008730:CDS | 45.0% | |
| TCTGTGCTCCTCAACAATCA+TGG | + | chr4.4:25391548-25391567 | MS.gene008730:intron | 45.0% | |
| TGAGAATGTTAGGACCTGGT+TGG | - | chr4.4:25391299-25391318 | None:intergenic | 45.0% | |
| TGCCCAAGACTAAGCCTATT+TGG | + | chr4.4:25391113-25391132 | MS.gene008730:intron | 45.0% | |
| TGCTTCCCAAACTCAACCTA+TGG | + | chr4.4:25391719-25391738 | MS.gene008730:CDS | 45.0% | |
| TGGGATAAGGCTTAGTTGGT+TGG | + | chr4.4:25391049-25391068 | MS.gene008730:intron | 45.0% | |
| TGGGTATGTTTGTCCACTGT+GGG | + | chr4.4:25393448-25393467 | MS.gene008730:intron | 45.0% | |
| TGTAGCCGATGCTACTCAAT+GGG | + | chr4.4:25391030-25391049 | MS.gene008730:intron | 45.0% | |
| TTAAGACCGGCGATGTTGTA+TGG | + | chr4.4:25390741-25390760 | MS.gene008730:intron | 45.0% | |
| TTGCATCAACCAAGGCTGAA+TGG | + | chr4.4:25393348-25393367 | MS.gene008730:CDS | 45.0% | |
| TTGCTTAAGATACCAGGGCT+TGG | + | chr4.4:25392157-25392176 | MS.gene008730:intron | 45.0% | |
| TTTGGCACGCTGTGATTTAG+GGG | + | chr4.4:25391624-25391643 | MS.gene008730:intron | 45.0% | |
| ! | AAGAGGCTTTTGTAGTGGCT+TGG | - | chr4.4:25394252-25394271 | None:intergenic | 45.0% |
| ! | AGAGGCTTTTGTAGTGGCTT+GGG | - | chr4.4:25394251-25394270 | None:intergenic | 45.0% |
| ! | AGTCCAGTTGGGTATCGTTA+TGG | - | chr4.4:25392386-25392405 | None:intergenic | 45.0% |
| ! | CAACATAATCAGAGTGCCCA+TGG | - | chr4.4:25393521-25393540 | None:intergenic | 45.0% |
| ! | GTTTGTCGGTTAAGAGTTCC+AGG | + | chr4.4:25391457-25391476 | MS.gene008730:CDS | 45.0% |
| ! | TCGAGCCATAGGTTGAGTTT+GGG | - | chr4.4:25391727-25391746 | None:intergenic | 45.0% |
| ! | TGGTTTTTGTGCAGTTGGGT+TGG | - | chr4.4:25394278-25394297 | None:intergenic | 45.0% |
| !! | ATTGAGTAGCATCGGCTACA+TGG | - | chr4.4:25391030-25391049 | None:intergenic | 45.0% |
| !! | CCAAGGCTTCAAGTTGACAA+TGG | + | chr4.4:25393428-25393447 | MS.gene008730:CDS | 45.0% |
| !!! | GTTTGTTTTAGTTCGACGGC+CGG | + | chr4.4:25390274-25390293 | MS.gene008730:intron | 45.0% |
| AAAAAGCTCCGTCGAGCCAT+AGG | - | chr4.4:25391738-25391757 | None:intergenic | 50.0% | |
| ACAACAGATGGGGTGCATGA+AGG | + | chr4.4:25391879-25391898 | MS.gene008730:CDS | 50.0% | |
| ACGATGAAGAACCAGCACGA+GGG | + | chr4.4:25390799-25390818 | MS.gene008730:intron | 50.0% | |
| AGAAGGACCCTTGAGGGTTA+TGG | + | chr4.4:25392750-25392769 | MS.gene008730:intron | 50.0% | |
| AGTAGATCAAGACCCCACAG+TGG | - | chr4.4:25393464-25393483 | None:intergenic | 50.0% | |
| ATCCTTGCCCATAACCCTCA+AGG | - | chr4.4:25392761-25392780 | None:intergenic | 50.0% | |
| ATGCCGTGTGCCAACTAATG+AGG | + | chr4.4:25391396-25391415 | MS.gene008730:CDS | 50.0% | |
| ATTAGTTGGCACACGGCATG+CGG | - | chr4.4:25391395-25391414 | None:intergenic | 50.0% | |
| CACTTATGTTACCCTCGTGC+TGG | - | chr4.4:25390813-25390832 | None:intergenic | 50.0% | |
| GAACCCCCTACAATGGTTCA+TGG | - | chr4.4:25391668-25391687 | None:intergenic | 50.0% | |
| GAAGGACCCTTGAGGGTTAT+GGG | + | chr4.4:25392751-25392770 | MS.gene008730:intron | 50.0% | |
| GCACCTCATTAGTTGGCACA+CGG | - | chr4.4:25391402-25391421 | None:intergenic | 50.0% | |
| GCAGTTGTTAGGAGAGAGCT+CGG | + | chr4.4:25394577-25394596 | MS.gene008730:intron | 50.0% | |
| GGGTATGTTTGTCCACTGTG+GGG | + | chr4.4:25393449-25393468 | MS.gene008730:intron | 50.0% | |
| GTTCTTCATCGTCCTCGTGT+TGG | - | chr4.4:25390791-25390810 | None:intergenic | 50.0% | |
| TCCTTGCCCATAACCCTCAA+GGG | - | chr4.4:25392760-25392779 | None:intergenic | 50.0% | |
| TGACACAGACCATTCAGCCT+TGG | - | chr4.4:25393360-25393379 | None:intergenic | 50.0% | |
| TGACAGCAACAACAGCTCCA+AGG | + | chr4.4:25393411-25393430 | MS.gene008730:CDS | 50.0% | |
| TGACATTCGGTTGACCGTTC+TGG | - | chr4.4:25390331-25390350 | None:intergenic | 50.0% | |
| TGAGGGTTATGGGCAAGGAT+TGG | + | chr4.4:25392761-25392780 | MS.gene008730:intron | 50.0% | |
| TGGGGGAAAATAGGCTTAGG+TGG | + | chr4.4:25390897-25390916 | MS.gene008730:intron | 50.0% | |
| TTCTTATCTTGCTGCCCGGA+AGG | - | chr4.4:25390545-25390564 | None:intergenic | 50.0% | |
| ! | CAAGAAGTGCAGACCTCTAC+TGG | + | chr4.4:25392587-25392606 | MS.gene008730:CDS | 50.0% |
| ! | CGGTAACTTGCCTGGTGATA+TGG | + | chr4.4:25392900-25392919 | MS.gene008730:CDS | 50.0% |
| ! | GGCAGAAGAGGCTTTTGTAG+TGG | - | chr4.4:25394257-25394276 | None:intergenic | 50.0% |
| ! | GTCGAGCCATAGGTTGAGTT+TGG | - | chr4.4:25391728-25391747 | None:intergenic | 50.0% |
| ! | TCTAGTTTGTCCTCTGCCTC+TGG | - | chr4.4:25390998-25391017 | None:intergenic | 50.0% |
| ! | TTGTTGAGGAGCACAGACCT+TGG | - | chr4.4:25391545-25391564 | None:intergenic | 50.0% |
| !! | GCTTTTGTAGTGGCTTGGGT+TGG | - | chr4.4:25394247-25394266 | None:intergenic | 50.0% |
| !! | GTAGTGGCTTGGGTTGGTTT+AGG | - | chr4.4:25394241-25394260 | None:intergenic | 50.0% |
| !! | GTTGACCGTTCTGGAATGGA+GGG | - | chr4.4:25390322-25390341 | None:intergenic | 50.0% |
| !! | TTCGGTTGACCGTTCTGGAA+TGG | - | chr4.4:25390326-25390345 | None:intergenic | 50.0% |
| !!! | CGGCTGGTTTTTGTGCAGTT+GGG | - | chr4.4:25394282-25394301 | None:intergenic | 50.0% |
| ACCCTTGAGGGTTATGGGCA+AGG | + | chr4.4:25392756-25392775 | MS.gene008730:intron | 55.0% | |
| ACTGGCCCTCCATTCCAGAA+CGG | + | chr4.4:25390314-25390333 | MS.gene008730:CDS | 55.0% | |
| AGCATGCGGTGGACGATATG+CGG | - | chr4.4:25394302-25394321 | None:intergenic | 55.0% | |
| CATGCACCCCATCTGTTGTC+AGG | - | chr4.4:25391878-25391897 | None:intergenic | 55.0% | |
| CCAGTTCCAAGCTCCAGTAG+AGG | - | chr4.4:25392603-25392622 | None:intergenic | 55.0% | |
| CCTCTACTGGAGCTTGGAAC+TGG | + | chr4.4:25392600-25392619 | MS.gene008730:CDS | 55.0% | |
| GACGATGAAGAACCAGCACG+AGG | + | chr4.4:25390798-25390817 | MS.gene008730:intron | 55.0% | |
| GCAGCTGCAGTCTTAGCATG+CGG | - | chr4.4:25394316-25394335 | None:intergenic | 55.0% | |
| GGAGCACAGACCTTGGATTC+TGG | - | chr4.4:25391538-25391557 | None:intergenic | 55.0% | |
| GGCCGGAAGAATGCTCACTA+TGG | + | chr4.4:25390291-25390310 | MS.gene008730:CDS | 55.0% | |
| GGCGATGAAGAACCAACACG+AGG | + | chr4.4:25390776-25390795 | MS.gene008730:intron | 55.0% | |
| TGCAGACCTCTACTGGAGCT+TGG | + | chr4.4:25392594-25392613 | MS.gene008730:CDS | 55.0% | |
| TGCAGCTGCTATTCAGGCAG+AGG | + | chr4.4:25394327-25394346 | MS.gene008730:CDS | 55.0% | |
| ! | CTTGCTGCCCGGAAGGTTTT+TGG | - | chr4.4:25390538-25390557 | None:intergenic | 55.0% |
| ! | GCTTCTGTTTTGTCGCCTCG+CGG | + | chr4.4:25390494-25390513 | MS.gene008730:CDS | 55.0% |
| !! | GGTTGACCGTTCTGGAATGG+AGG | - | chr4.4:25390323-25390342 | None:intergenic | 55.0% |
| !! | TGCAGTTGGGTTGGCAGAAG+AGG | - | chr4.4:25394269-25394288 | None:intergenic | 55.0% |
| !!! | GCGGCTGGTTTTTGTGCAGT+TGG | - | chr4.4:25394283-25394302 | None:intergenic | 55.0% |
| AGCTCAGCGGAAGCAACTCC+TGG | - | chr4.4:25391478-25391497 | None:intergenic | 60.0% | |
| CTGGCAGGAACCCCCTACAA+TGG | - | chr4.4:25391675-25391694 | None:intergenic | 60.0% | |
| GCTGCAGTCTTAGCATGCGG+TGG | - | chr4.4:25394313-25394332 | None:intergenic | 60.0% | |
| ! | GCTGGCTTCGGTAACTTGCC+TGG | + | chr4.4:25392892-25392911 | MS.gene008730:CDS | 60.0% |
| TGCGGTGGACGATATGCGGC+TGG | - | chr4.4:25394298-25394317 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 25390175 | 25394773 | 25390175 | ID=MS.gene008730 |
| chr4.4 | mRNA | 25390175 | 25394773 | 25390175 | ID=MS.gene008730.t1;Parent=MS.gene008730 |
| chr4.4 | exon | 25390175 | 25390196 | 25390175 | ID=MS.gene008730.t1.exon1;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25390175 | 25390196 | 25390175 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25390285 | 25390639 | 25390285 | ID=MS.gene008730.t1.exon2;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25390285 | 25390639 | 25390285 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25391360 | 25391546 | 25391360 | ID=MS.gene008730.t1.exon3;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25391360 | 25391546 | 25391360 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25391681 | 25391915 | 25391681 | ID=MS.gene008730.t1.exon4;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25391681 | 25391915 | 25391681 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25392012 | 25392080 | 25392012 | ID=MS.gene008730.t1.exon5;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25392012 | 25392080 | 25392012 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25392559 | 25392660 | 25392559 | ID=MS.gene008730.t1.exon6;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25392559 | 25392660 | 25392559 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25392881 | 25392921 | 25392881 | ID=MS.gene008730.t1.exon7;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25392881 | 25392921 | 25392881 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25393317 | 25393450 | 25393317 | ID=MS.gene008730.t1.exon8;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25393317 | 25393450 | 25393317 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25393893 | 25393956 | 25393893 | ID=MS.gene008730.t1.exon9;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25393893 | 25393956 | 25393893 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25394044 | 25394140 | 25394044 | ID=MS.gene008730.t1.exon10;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25394044 | 25394140 | 25394044 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25394230 | 25394348 | 25394230 | ID=MS.gene008730.t1.exon11;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25394230 | 25394348 | 25394230 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25394581 | 25394603 | 25394581 | ID=MS.gene008730.t1.exon12;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25394581 | 25394603 | 25394581 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| chr4.4 | exon | 25394689 | 25394773 | 25394689 | ID=MS.gene008730.t1.exon13;Parent=MS.gene008730.t1 |
| chr4.4 | CDS | 25394689 | 25394773 | 25394689 | ID=cds.MS.gene008730.t1;Parent=MS.gene008730.t1 |
| Gene Sequence |
| Protein sequence |
