Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26565.t1 | AFK44469.1 | 98.5 | 481 | 7 | 0 | 3 | 483 | 9 | 489 | 3.50E-281 | 976.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26565.t1 | O74965 | 35.9 | 437 | 254 | 7 | 38 | 467 | 39 | 456 | 1.1e-76 | 288.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26565.t1 | I3SW27 | 98.5 | 481 | 7 | 0 | 3 | 483 | 9 | 489 | 2.5e-281 | 976.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93131 | MS.gene26565 | PPI |
| MS.gene40016 | MS.gene26565 | PPI |
| MS.gene01984 | MS.gene26565 | PPI |
| MS.gene023135 | MS.gene26565 | PPI |
| MS.gene35140 | MS.gene26565 | PPI |
| MS.gene58159 | MS.gene26565 | PPI |
| MS.gene82426 | MS.gene26565 | PPI |
| MS.gene028153 | MS.gene26565 | PPI |
| MS.gene26565 | MS.gene70303 | PPI |
| MS.gene037362 | MS.gene26565 | PPI |
| MS.gene004699 | MS.gene26565 | PPI |
| MS.gene36472 | MS.gene26565 | PPI |
| MS.gene32083 | MS.gene26565 | PPI |
| MS.gene72768 | MS.gene26565 | PPI |
| MS.gene036254 | MS.gene26565 | PPI |
| MS.gene028318 | MS.gene26565 | PPI |
| MS.gene83444 | MS.gene26565 | PPI |
| MS.gene26565 | MS.gene003175 | PPI |
| MS.gene57305 | MS.gene26565 | PPI |
| MS.gene048301 | MS.gene26565 | PPI |
| MS.gene02854 | MS.gene26565 | PPI |
| MS.gene030823 | MS.gene26565 | PPI |
| MS.gene030707 | MS.gene26565 | PPI |
| MS.gene28161 | MS.gene26565 | PPI |
| MS.gene029211 | MS.gene26565 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26565.t1 | MTR_4g087280 | 98.545 | 481 | 7 | 0 | 3 | 483 | 9 | 489 | 0.0 | 995 |
| MS.gene26565.t1 | MTR_4g087280 | 98.312 | 474 | 8 | 0 | 3 | 476 | 9 | 482 | 0.0 | 977 |
| MS.gene26565.t1 | MTR_5g091610 | 69.892 | 93 | 16 | 2 | 332 | 424 | 126 | 206 | 1.59e-35 | 133 |
| MS.gene26565.t1 | MTR_3g105430 | 24.000 | 400 | 265 | 14 | 45 | 414 | 224 | 614 | 9.35e-22 | 99.4 |
| MS.gene26565.t1 | MTR_2g088350 | 97.436 | 39 | 1 | 0 | 397 | 435 | 1 | 39 | 6.68e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26565.t1 | AT1G73180 | 68.058 | 479 | 149 | 1 | 3 | 481 | 6 | 480 | 0.0 | 712 |
| MS.gene26565.t1 | AT1G73180 | 67.932 | 474 | 148 | 1 | 3 | 476 | 6 | 475 | 0.0 | 705 |
| MS.gene26565.t1 | AT5G27640 | 23.618 | 398 | 266 | 13 | 45 | 412 | 221 | 610 | 1.41e-22 | 101 |
| MS.gene26565.t1 | AT5G27640 | 23.618 | 398 | 266 | 13 | 45 | 412 | 221 | 610 | 1.41e-22 | 101 |
| MS.gene26565.t1 | AT5G27640 | 23.618 | 398 | 266 | 13 | 45 | 412 | 247 | 636 | 1.59e-22 | 101 |
| MS.gene26565.t1 | AT5G25780 | 23.250 | 400 | 268 | 14 | 45 | 414 | 222 | 612 | 2.67e-21 | 97.8 |
Find 100 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGGATACATTTCCCTTT+TGG | 0.184033 | 4.1:-22865053 | None:intergenic |
| GTTCTACAACCCAACTTAAA+TGG | 0.213890 | 4.1:+22864169 | MS.gene26565:CDS |
| CCAGAGTCACCAAGTAAATT+TGG | 0.263110 | 4.1:+22866461 | MS.gene26565:CDS |
| TGACATTCGGTTGACCGTTC+TGG | 0.288486 | 4.1:-22862786 | None:intergenic |
| TAAGACTGCAGCTGCTATTC+AGG | 0.307860 | 4.1:+22866726 | MS.gene26565:CDS |
| GGAGCACAGACCTTGGATTC+TGG | 0.314496 | 4.1:-22863941 | None:intergenic |
| CGGTAACTTGCCTGGTGATA+TGG | 0.317446 | 4.1:+22865305 | MS.gene26565:CDS |
| ATGGCATCTCTTGAGATATT+AGG | 0.332064 | 4.1:+22862639 | MS.gene26565:CDS |
| GTCGAGCCATAGGTTGAGTT+TGG | 0.333097 | 4.1:-22864131 | None:intergenic |
| GTAACACTGCTAAAGAAATT+AGG | 0.352354 | 4.1:+22862905 | MS.gene26565:CDS |
| AGCTCAGCGGAAGCAACTCC+TGG | 0.358438 | 4.1:-22863881 | None:intergenic |
| TTAGAGTTTGCTGTTGTGTA+TGG | 0.359900 | 4.1:+22864462 | MS.gene26565:CDS |
| AAAACAAATCAGAGTTACTA+TGG | 0.360928 | 4.1:+22864240 | MS.gene26565:CDS |
| AAGATAAGAATGTCACATTA+TGG | 0.367499 | 4.1:+22863013 | MS.gene26565:CDS |
| GTAGTGGCTTGGGTTGGTTT+AGG | 0.371129 | 4.1:-22866643 | None:intergenic |
| AACCATGATTCCATTTAAGT+TGG | 0.389606 | 4.1:-22864179 | None:intergenic |
| GGCCGGAAGAATGCTCACTA+TGG | 0.390559 | 4.1:+22862749 | MS.gene26565:CDS |
| GTTTGTCGGTTAAGAGTTCC+AGG | 0.393269 | 4.1:+22863863 | MS.gene26565:CDS |
| TGATGATGGATCTTTGCTTA+TGG | 0.395412 | 4.1:+22862846 | MS.gene26565:CDS |
| CAAGAAGTGCAGACCTCTAC+TGG | 0.395633 | 4.1:+22864992 | MS.gene26565:CDS |
| GATTTGTATTTGCAGTTGTT+AGG | 0.397376 | 4.1:+22866971 | MS.gene26565:intron |
| TCAGAGCTGAATTGAATTGC+CGG | 0.397889 | 4.1:-22863767 | None:intergenic |
| GATGCTCAATGGTCAAATTC+AGG | 0.398670 | 4.1:+22864438 | MS.gene26565:CDS |
| AAAACAGAAGCCACGAGATT+AGG | 0.400924 | 4.1:-22862940 | None:intergenic |
| GTCCATAGTGAGCATTCTTC+CGG | 0.404734 | 4.1:-22862751 | None:intergenic |
| CAAACTATTTGCAGGCTGAT+TGG | 0.414549 | 4.1:+22866435 | MS.gene26565:intron |
| AAATGGAATCATGGTTCAAC+TGG | 0.419644 | 4.1:+22864186 | MS.gene26565:CDS |
| ATATATAGTAATGACAGAAT+TGG | 0.420958 | 4.1:-22862878 | None:intergenic |
| GCTGGCTTCGGTAACTTGCC+TGG | 0.426870 | 4.1:+22865297 | MS.gene26565:CDS |
| GACCATTGAGCATCATGAAT+AGG | 0.429911 | 4.1:-22864429 | None:intergenic |
| CATGCACCCCATCTGTTGTC+AGG | 0.436554 | 4.1:-22864281 | None:intergenic |
| TGCAGTTGGGTTGGCAGAAG+AGG | 0.444560 | 4.1:-22866671 | None:intergenic |
| TCGAGCCATAGGTTGAGTTT+GGG | 0.446137 | 4.1:-22864130 | None:intergenic |
| AGAATATGACAAGGGCCAAT+TGG | 0.452350 | 4.1:+22863076 | MS.gene26565:CDS |
| TTCTTATCTTGCGGCCCGGA+AGG | 0.454027 | 4.1:-22863000 | None:intergenic |
| CCATTGTCAACTTGAAGCCT+TGG | 0.454121 | 4.1:-22865833 | None:intergenic |
| CCAAATTTACTTGGTGACTC+TGG | 0.455862 | 4.1:-22866461 | None:intergenic |
| TTTCTAAAGGAGTTGTTTGT+CGG | 0.459404 | 4.1:+22863849 | MS.gene26565:CDS |
| TCAAACAGAGTTGCTTTAGC+AGG | 0.461231 | 4.1:-22864969 | None:intergenic |
| TAATTATTTGGCAGGGAAAG+AGG | 0.463070 | 4.1:+22864404 | MS.gene26565:intron |
| ACTTTATCAAGTTTGACATT+CGG | 0.464197 | 4.1:-22862799 | None:intergenic |
| ACCATGATTCCATTTAAGTT+GGG | 0.465601 | 4.1:-22864178 | None:intergenic |
| GTCATGAAATAGCACCCATC+TGG | 0.472938 | 4.1:-22865797 | None:intergenic |
| CCTCTACTGGAGCTTGGAAC+TGG | 0.479313 | 4.1:+22865005 | MS.gene26565:CDS |
| TAGAGTTTGCTGTTGTGTAT+GGG | 0.481102 | 4.1:+22864463 | MS.gene26565:CDS |
| ACTATCCGATGGAACCCAAA+AGG | 0.484935 | 4.1:+22865038 | MS.gene26565:CDS |
| TTGCATCAACCAAGGCTGAA+TGG | 0.489961 | 4.1:+22865753 | MS.gene26565:CDS |
| TTCGGTTGACCGTTCTGGAA+TGG | 0.491146 | 4.1:-22862781 | None:intergenic |
| GTGATGTCACCAAATTTACT+TGG | 0.492747 | 4.1:-22866470 | None:intergenic |
| AATGCTAAATTCAGTGATGA+TGG | 0.493653 | 4.1:+22862832 | MS.gene26565:CDS |
| AATTATTTGGCAGGGAAAGA+GGG | 0.495759 | 4.1:+22864405 | MS.gene26565:intron |
| TGCTTCCCAAACTCAACCTA+TGG | 0.499274 | 4.1:+22864125 | MS.gene26565:CDS |
| ACCCAACTTAAATGGAATCA+TGG | 0.499990 | 4.1:+22864177 | MS.gene26565:CDS |
| TGCAGACCTCTACTGGAGCT+TGG | 0.507684 | 4.1:+22864999 | MS.gene26565:CDS |
| GACATTCTTATCTTGCGGCC+CGG | 0.510825 | 4.1:-22863004 | None:intergenic |
| AATGGTCTGTGTCAAGTGAA+TGG | 0.511021 | 4.1:+22865771 | MS.gene26565:CDS |
| CAAGGCTTCAAGTTGACAAT+GGG | 0.512251 | 4.1:+22865834 | MS.gene26565:CDS |
| TGACACAGACCATTCAGCCT+TGG | 0.524004 | 4.1:-22865762 | None:intergenic |
| TTATACTACCTGACAACAGA+TGG | 0.526764 | 4.1:+22864273 | MS.gene26565:CDS |
| TTCCATCGGATAGTGTTGTA+AGG | 0.527812 | 4.1:-22865029 | None:intergenic |
| GGCCTATTCATGATGCTCAA+TGG | 0.539103 | 4.1:+22864427 | MS.gene26565:CDS |
| GCAGTTGTTAGGAGAGAGCT+CGG | 0.541868 | 4.1:+22866982 | MS.gene26565:intron |
| GAAGAATGCTCACTATGGAC+TGG | 0.543679 | 4.1:+22862754 | MS.gene26565:CDS |
| TGCATTTGTTCCAGAATCCA+AGG | 0.545907 | 4.1:+22863931 | MS.gene26565:CDS |
| TGCGGTGGACGATATGCGGC+TGG | 0.549407 | 4.1:-22866700 | None:intergenic |
| CTATCCGATGGAACCCAAAA+GGG | 0.550340 | 4.1:+22865039 | MS.gene26565:CDS |
| GGTTGACCGTTCTGGAATGG+AGG | 0.551650 | 4.1:-22862778 | None:intergenic |
| AATGCAGCTACATGAGAAGC+AGG | 0.553166 | 4.1:-22863914 | None:intergenic |
| TAAGTTGGGTTGTAGAACAT+CGG | 0.563090 | 4.1:-22864164 | None:intergenic |
| CCAAGGCTTCAAGTTGACAA+TGG | 0.565390 | 4.1:+22865833 | MS.gene26565:CDS |
| ACAACAGATGGGGTGCATGA+AGG | 0.565598 | 4.1:+22864285 | MS.gene26565:CDS |
| TGCAGCTGCTATTCAGGCAG+AGG | 0.568714 | 4.1:+22866732 | MS.gene26565:CDS |
| TATACTACCTGACAACAGAT+GGG | 0.573112 | 4.1:+22864274 | MS.gene26565:CDS |
| GTTGACCGTTCTGGAATGGA+GGG | 0.578391 | 4.1:-22862777 | None:intergenic |
| TGATGGATCTTTGCTTATGG+TGG | 0.578520 | 4.1:+22862849 | MS.gene26565:CDS |
| GTCCTTACAACACTATCCGA+TGG | 0.588625 | 4.1:+22865027 | MS.gene26565:CDS |
| GCTGCAGTCTTAGCATGCGG+TGG | 0.596595 | 4.1:-22866715 | None:intergenic |
| CAAGTGAATGGTCTCCAGAT+GGG | 0.601629 | 4.1:+22865783 | MS.gene26565:CDS |
| ATTATTTGGCAGGGAAAGAG+GGG | 0.604036 | 4.1:+22864406 | MS.gene26565:intron |
| ATGCCGTGTGCCAACTAATG+AGG | 0.604069 | 4.1:+22863802 | MS.gene26565:CDS |
| AGCATGCGGTGGACGATATG+CGG | 0.604885 | 4.1:-22866704 | None:intergenic |
| TCAAGTGAATGGTCTCCAGA+TGG | 0.615111 | 4.1:+22865782 | MS.gene26565:CDS |
| CCAGTTCCAAGCTCCAGTAG+AGG | 0.620222 | 4.1:-22865005 | None:intergenic |
| ATTAGTTGGCACACGGCATG+CGG | 0.625309 | 4.1:-22863798 | None:intergenic |
| AAACTCAACCTATGGCTCGA+CGG | 0.625537 | 4.1:+22864133 | MS.gene26565:CDS |
| TTCAACTGGACTTCTAATTG+TGG | 0.628741 | 4.1:+22864200 | MS.gene26565:CDS |
| GATGTTTGACAAGTTATACC+AGG | 0.635363 | 4.1:+22866340 | MS.gene26565:CDS |
| ACATTATGGAAGATTGAGAC+TGG | 0.641864 | 4.1:+22863027 | MS.gene26565:CDS |
| TGACAGCAACAACAGCTCCA+AGG | 0.647896 | 4.1:+22865816 | MS.gene26565:CDS |
| GGAGAACATACCATATCACC+AGG | 0.651350 | 4.1:-22865315 | None:intergenic |
| GCAGCTGCAGTCTTAGCATG+CGG | 0.651643 | 4.1:-22866718 | None:intergenic |
| AATGTGACATTCTTATCTTG+CGG | 0.653542 | 4.1:-22863009 | None:intergenic |
| GCACCTCATTAGTTGGCACA+CGG | 0.654957 | 4.1:-22863805 | None:intergenic |
| GAAACAGCTTGCATCAACCA+AGG | 0.668592 | 4.1:+22865745 | MS.gene26565:CDS |
| TTCTCAGAAGAATATGACAA+GGG | 0.672557 | 4.1:+22863068 | MS.gene26565:CDS |
| ATTCTCAGAAGAATATGACA+AGG | 0.693333 | 4.1:+22863067 | MS.gene26565:CDS |
| ACTGGCCCTCCATTCCAGAA+CGG | 0.694693 | 4.1:+22862772 | MS.gene26565:CDS |
| ATACTACCTGACAACAGATG+GGG | 0.704485 | 4.1:+22864275 | MS.gene26565:CDS |
| AGGTGATATAGAAAGCTCAG+CGG | 0.737636 | 4.1:-22863894 | None:intergenic |
| GTTTGCAAATAAGTTCCGCG+AGG | 0.750889 | 4.1:-22862967 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAAACATAGAT+AGG | - | chr4.1:22862693-22862712 | None:intergenic | 10.0% |
| !!! | ATCATAATTTTATTTTCTAT+CGG | - | chr4.1:22865440-22865459 | None:intergenic | 10.0% |
| !!! | GATTTTTTGTTTTAATTATT+TGG | + | chr4.1:22864392-22864411 | MS.gene26565:intron | 10.0% |
| !! | AACATAATAATTTAATCAGT+CGG | - | chr4.1:22865340-22865359 | None:intergenic | 15.0% |
| !! | CAACATTAAAAAAAAAAGTT+TGG | + | chr4.1:22865559-22865578 | MS.gene26565:intron | 15.0% |
| !! | TAATAAAATCTATTGATCTA+TGG | - | chr4.1:22865990-22866009 | None:intergenic | 15.0% |
| !! | TATTAATAAAAAACTATGCA+GGG | - | chr4.1:22864822-22864841 | None:intergenic | 15.0% |
| !!! | AAAATTTTATCTTTTAAGAC+CGG | + | chr4.1:22863185-22863204 | MS.gene26565:intron | 15.0% |
| !!! | ATAAACAATTGAATATTTTC+AGG | - | chr4.1:22865897-22865916 | None:intergenic | 15.0% |
| !!! | ATAATTGAAGTTTTTATTTC+TGG | + | chr4.1:22865594-22865613 | MS.gene26565:intron | 15.0% |
| !!! | TAAACAATTGAATATTTTCA+GGG | - | chr4.1:22865896-22865915 | None:intergenic | 15.0% |
| !!! | TCATAATTTTATTTTCTATC+GGG | - | chr4.1:22865439-22865458 | None:intergenic | 15.0% |
| !! | AAATGGAAAGGAAAAAAAAA+AGG | - | chr4.1:22864912-22864931 | None:intergenic | 20.0% |
| !! | AATGTTGAAAATAACGTTTA+TGG | - | chr4.1:22865546-22865565 | None:intergenic | 20.0% |
| !! | AATTGTTTATCTTTATCCAT+GGG | + | chr4.1:22865907-22865926 | MS.gene26565:intron | 20.0% |
| !! | ACATAATAATTTAATCAGTC+GGG | - | chr4.1:22865339-22865358 | None:intergenic | 20.0% |
| !! | AGAAAGAAAAAAAAAACTCA+TGG | - | chr4.1:22865114-22865133 | None:intergenic | 20.0% |
| !! | AGGAAAAAAAAAAGGATTAA+AGG | - | chr4.1:22864904-22864923 | None:intergenic | 20.0% |
| !! | ATATATAGTAATGACAGAAT+TGG | - | chr4.1:22862881-22862900 | None:intergenic | 20.0% |
| !! | ATGAAATATTAGAATAAGCA+TGG | - | chr4.1:22866557-22866576 | None:intergenic | 20.0% |
| !! | CTATTAATAAAAAACTATGC+AGG | - | chr4.1:22864823-22864842 | None:intergenic | 20.0% |
| !! | GAAAGAAAAAAAAAACTCAT+GGG | - | chr4.1:22865113-22865132 | None:intergenic | 20.0% |
| !! | TATATGTGATATGTTCAATA+TGG | + | chr4.1:22864496-22864515 | MS.gene26565:intron | 20.0% |
| !! | TTGAACATATCACATATAAA+AGG | - | chr4.1:22864494-22864513 | None:intergenic | 20.0% |
| !!! | AAGATGACTTTATTGTTTTT+TGG | + | chr4.1:22864640-22864659 | MS.gene26565:intron | 20.0% |
| !!! | AATTTAAAATAGAAACAGTG+AGG | - | chr4.1:22866782-22866801 | None:intergenic | 20.0% |
| !!! | AGATGACTTTATTGTTTTTT+GGG | + | chr4.1:22864641-22864660 | MS.gene26565:intron | 20.0% |
| !!! | ATACATGGATCAATTTTTAT+AGG | - | chr4.1:22863470-22863489 | None:intergenic | 20.0% |
| !!! | ATCAAGATTTTTCACTATAA+TGG | + | chr4.1:22866299-22866318 | MS.gene26565:CDS | 20.0% |
| !!! | ATTTAAAATAGAAACAGTGA+GGG | - | chr4.1:22866781-22866800 | None:intergenic | 20.0% |
| !!! | CATAATTTTATTTTCTATCG+GGG | - | chr4.1:22865438-22865457 | None:intergenic | 20.0% |
| !!! | TCAAGATTTTTCACTATAAT+GGG | + | chr4.1:22866300-22866319 | MS.gene26565:CDS | 20.0% |
| !!! | TGATATAAAGTATCTAAATC+AGG | + | chr4.1:22865215-22865234 | MS.gene26565:intron | 20.0% |
| !!! | TTAATTTGATGACATTTATG+AGG | + | chr4.1:22866165-22866184 | MS.gene26565:intron | 20.0% |
| !!! | TTTCTCTTTTAAATCTAAGA+AGG | + | chr4.1:22865138-22865157 | MS.gene26565:intron | 20.0% |
| !!! | TTTGGGACTTTATTTTTTTT+GGG | + | chr4.1:22864658-22864677 | MS.gene26565:intron | 20.0% |
| !!! | TTTGTTTTAATTATTTGGCA+GGG | + | chr4.1:22864397-22864416 | MS.gene26565:intron | 20.0% |
| !!! | TTTTGGGACTTTATTTTTTT+TGG | + | chr4.1:22864657-22864676 | MS.gene26565:intron | 20.0% |
| !!! | TTTTGTTTTAATTATTTGGC+AGG | + | chr4.1:22864396-22864415 | MS.gene26565:intron | 20.0% |
| ! | AAAACAAATCAGAGTTACTA+TGG | + | chr4.1:22864240-22864259 | MS.gene26565:CDS | 25.0% |
| ! | AAACTCATTCAAGAATTCTA+GGG | - | chr4.1:22866919-22866938 | None:intergenic | 25.0% |
| ! | AACAATTAGAACATACTAAG+AGG | - | chr4.1:22864318-22864337 | None:intergenic | 25.0% |
| ! | AAGATAAGAATGTCACATTA+TGG | + | chr4.1:22863013-22863032 | MS.gene26565:CDS | 25.0% |
| ! | AATGAAAAATGCTTTCTTAG+TGG | - | chr4.1:22866253-22866272 | None:intergenic | 25.0% |
| ! | ACTTTATCAAGTTTGACATT+CGG | - | chr4.1:22862802-22862821 | None:intergenic | 25.0% |
| ! | ATATATCAATGTTGCATACA+TGG | - | chr4.1:22863485-22863504 | None:intergenic | 25.0% |
| ! | ATTCAACAATACATACCAAT+TGG | - | chr4.1:22863094-22863113 | None:intergenic | 25.0% |
| ! | CAATTGTTTATCTTTATCCA+TGG | + | chr4.1:22865906-22865925 | MS.gene26565:intron | 25.0% |
| ! | GAAAATAAACATCCAACAAA+TGG | - | chr4.1:22864929-22864948 | None:intergenic | 25.0% |
| ! | TAAAGTCATCTTGCAAAAAT+TGG | - | chr4.1:22864632-22864651 | None:intergenic | 25.0% |
| ! | TATATTTGATTGCAATCACT+TGG | + | chr4.1:22866068-22866087 | MS.gene26565:intron | 25.0% |
| ! | TCACTTGGTTATATATAACT+TGG | + | chr4.1:22866083-22866102 | MS.gene26565:intron | 25.0% |
| ! | TGGTATGTATTGTTGAATTA+TGG | + | chr4.1:22863096-22863115 | MS.gene26565:intron | 25.0% |
| ! | TTTAAAGAAGAACTGATGAT+TGG | + | chr4.1:22864342-22864361 | MS.gene26565:intron | 25.0% |
| !! | ACTGCAAATACAAATCATTT+TGG | - | chr4.1:22866967-22866986 | None:intergenic | 25.0% |
| !! | GAATTGATGCTATTGTTATT+TGG | + | chr4.1:22864012-22864031 | MS.gene26565:intron | 25.0% |
| !! | TTTTGTTCTTTTTCCATTGA+AGG | + | chr4.1:22866276-22866295 | MS.gene26565:intron | 25.0% |
| !!! | ATTTTTCATTTTGCTGTTCT+AGG | + | chr4.1:22865700-22865719 | MS.gene26565:intron | 25.0% |
| !!! | GGCTTTTAAAATCATATACA+AGG | - | chr4.1:22864771-22864790 | None:intergenic | 25.0% |
| !!! | TTTCTTTGTTTTTTCCTTTC+TGG | + | chr4.1:22865359-22865378 | MS.gene26565:intron | 25.0% |
| !!! | TTTTTTTCCTTTCCATTTGT+TGG | + | chr4.1:22864914-22864933 | MS.gene26565:intron | 25.0% |
| AAAAATTGCACCTCATTAGT+TGG | - | chr4.1:22863815-22863834 | None:intergenic | 30.0% | |
| AAAATTCCATGAACCATTGT+AGG | + | chr4.1:22864065-22864084 | MS.gene26565:intron | 30.0% | |
| AAATTCCATGAACCATTGTA+GGG | + | chr4.1:22864066-22864085 | MS.gene26565:intron | 30.0% | |
| AACCATGATTCCATTTAAGT+TGG | - | chr4.1:22864182-22864201 | None:intergenic | 30.0% | |
| AATATCACAAGCAATTCTCA+TGG | + | chr4.1:22865517-22865536 | MS.gene26565:intron | 30.0% | |
| AATGCTAAATTCAGTGATGA+TGG | + | chr4.1:22862832-22862851 | MS.gene26565:CDS | 30.0% | |
| AATGTGACATTCTTATCTTG+CGG | - | chr4.1:22863012-22863031 | None:intergenic | 30.0% | |
| ACAAGCAAAAATTTGTACAC+TGG | - | chr4.1:22864100-22864119 | None:intergenic | 30.0% | |
| ATAAAACTGCAAAACAGTCA+AGG | - | chr4.1:22865272-22865291 | None:intergenic | 30.0% | |
| ATAATTCAACATTCTCGTAG+TGG | - | chr4.1:22865488-22865507 | None:intergenic | 30.0% | |
| ATGAATCAGAAAACATGCTA+TGG | + | chr4.1:22866194-22866213 | MS.gene26565:intron | 30.0% | |
| ATTCTCAGAAGAATATGACA+AGG | + | chr4.1:22863067-22863086 | MS.gene26565:CDS | 30.0% | |
| ATTTCAGCAATAAGTTTGCA+TGG | + | chr4.1:22866812-22866831 | MS.gene26565:intron | 30.0% | |
| CAAACTCATTCAAGAATTCT+AGG | - | chr4.1:22866920-22866939 | None:intergenic | 30.0% | |
| CTTGAAGATAAAAAACCATC+AGG | + | chr4.1:22866524-22866543 | MS.gene26565:CDS | 30.0% | |
| GAAAAATCTTGATCCTTCAA+TGG | - | chr4.1:22866292-22866311 | None:intergenic | 30.0% | |
| GACAGTTAAAACATAAGTCA+TGG | - | chr4.1:22863728-22863747 | None:intergenic | 30.0% | |
| GATAGGATTATAAAGATTGG+GGG | + | chr4.1:22863337-22863356 | MS.gene26565:intron | 30.0% | |
| GATATTTGCTTAAGATACCA+GGG | + | chr4.1:22864558-22864577 | MS.gene26565:intron | 30.0% | |
| GATGATAGTCATATTACTAG+AGG | + | chr4.1:22863434-22863453 | MS.gene26565:intron | 30.0% | |
| GATTTGTATTTGCAGTTGTT+AGG | + | chr4.1:22866971-22866990 | MS.gene26565:intron | 30.0% | |
| GGATAGGATTATAAAGATTG+GGG | + | chr4.1:22863336-22863355 | MS.gene26565:intron | 30.0% | |
| GGCATAACTAAAACATGTTA+AGG | - | chr4.1:22864951-22864970 | None:intergenic | 30.0% | |
| GGGATAGGATTATAAAGATT+GGG | + | chr4.1:22863335-22863354 | MS.gene26565:intron | 30.0% | |
| GTAACACTGCTAAAGAAATT+AGG | + | chr4.1:22862905-22862924 | MS.gene26565:CDS | 30.0% | |
| TAAAACTGCAAAACAGTCAA+GGG | - | chr4.1:22865271-22865290 | None:intergenic | 30.0% | |
| TAAACATCCAACAAATGGAA+AGG | - | chr4.1:22864924-22864943 | None:intergenic | 30.0% | |
| TATAAAGATTGGGGGAAAAT+AGG | + | chr4.1:22863345-22863364 | MS.gene26565:intron | 30.0% | |
| TGAATCAGAAAACATGCTAT+GGG | + | chr4.1:22866195-22866214 | MS.gene26565:intron | 30.0% | |
| TGATATTTGCTTAAGATACC+AGG | + | chr4.1:22864557-22864576 | MS.gene26565:intron | 30.0% | |
| TGGGATAGGATTATAAAGAT+TGG | + | chr4.1:22863334-22863353 | MS.gene26565:intron | 30.0% | |
| TTCTCAGAAGAATATGACAA+GGG | + | chr4.1:22863068-22863087 | MS.gene26565:CDS | 30.0% | |
| TTTGAAAATAACAGTAGAGC+TGG | + | chr4.1:22864709-22864728 | MS.gene26565:intron | 30.0% | |
| TTTGATTACTATTCGAAAGC+AGG | + | chr4.1:22864586-22864605 | MS.gene26565:intron | 30.0% | |
| ! | ACAAAATAAAAGCAGCCTTT+TGG | - | chr4.1:22865966-22865985 | None:intergenic | 30.0% |
| ! | ACCATGATTCCATTTAAGTT+GGG | - | chr4.1:22864181-22864200 | None:intergenic | 30.0% |
| ! | AGTAGTTCTACTCTTAATAG+TGG | + | chr4.1:22866857-22866876 | MS.gene26565:intron | 30.0% |
| ! | AGTGTACAAATTTTTGCTTG+TGG | + | chr4.1:22864099-22864118 | MS.gene26565:CDS | 30.0% |
| ! | GAAGATATTTTGTGCTTGAT+TGG | + | chr4.1:22865384-22865403 | MS.gene26565:intron | 30.0% |
| ! | TTTCTAAAGGAGTTGTTTGT+CGG | + | chr4.1:22863849-22863868 | MS.gene26565:CDS | 30.0% |
| !! | CTGTTTTGCAGTTTTATGTT+TGG | + | chr4.1:22865275-22865294 | MS.gene26565:intron | 30.0% |
| !! | TACCATCACTTTTATCAGAT+TGG | + | chr4.1:22865461-22865480 | MS.gene26565:intron | 30.0% |
| !!! | GAAAGTTTTAGACTTAGATC+AGG | + | chr4.1:22864680-22864699 | MS.gene26565:intron | 30.0% |
| !!! | TATTTTGGGATTACGTAGAA+AGG | + | chr4.1:22865723-22865742 | MS.gene26565:CDS | 30.0% |
| !!! | TTCTGTTTGTTTTAGTTCGA+CGG | + | chr4.1:22862728-22862747 | MS.gene26565:intron | 30.0% |
| !!! | TTTGCTGTTCTAGGTATTTT+GGG | + | chr4.1:22865709-22865728 | MS.gene26565:intron | 30.0% |
| !!! | TTTTGCTGTTCTAGGTATTT+TGG | + | chr4.1:22865708-22865727 | MS.gene26565:intron | 30.0% |
| AAAAATCGTTATCGTCGTTG+TGG | - | chr4.1:22864379-22864398 | None:intergenic | 35.0% | |
| AAAATAGGCTTAGGTGGTTT+GGG | + | chr4.1:22863360-22863379 | MS.gene26565:intron | 35.0% | |
| AAACATTCCAAAAACCTTCC+GGG | + | chr4.1:22862986-22863005 | MS.gene26565:CDS | 35.0% | |
| AAACCAAATAGGCTTAGTCT+TGG | - | chr4.1:22863525-22863544 | None:intergenic | 35.0% | |
| AAATGGAATCATGGTTCAAC+TGG | + | chr4.1:22864186-22864205 | MS.gene26565:CDS | 35.0% | |
| AATTATTTGGCAGGGAAAGA+GGG | + | chr4.1:22864405-22864424 | MS.gene26565:intron | 35.0% | |
| AATTCCATGAACCATTGTAG+GGG | + | chr4.1:22864067-22864086 | MS.gene26565:intron | 35.0% | |
| ACATTATGGAAGATTGAGAC+TGG | + | chr4.1:22863027-22863046 | MS.gene26565:CDS | 35.0% | |
| ACCCAACTTAAATGGAATCA+TGG | + | chr4.1:22864177-22864196 | MS.gene26565:CDS | 35.0% | |
| AGTAAGAAGAGTAGATCAGA+TGG | + | chr4.1:22863412-22863431 | MS.gene26565:intron | 35.0% | |
| AGTGTAAGATGTCATCCAAA+AGG | + | chr4.1:22865948-22865967 | MS.gene26565:intron | 35.0% | |
| ATGGCATCTCTTGAGATATT+AGG | + | chr4.1:22862639-22862658 | MS.gene26565:CDS | 35.0% | |
| ATTGGCTAAATTAGGACTAC+TGG | + | chr4.1:22865402-22865421 | MS.gene26565:intron | 35.0% | |
| ATTGTGTGCAAACTATTTGC+AGG | + | chr4.1:22866427-22866446 | MS.gene26565:intron | 35.0% | |
| CAAAATATCTTCCACCAGAA+AGG | - | chr4.1:22865376-22865395 | None:intergenic | 35.0% | |
| CAAACATTCCAAAAACCTTC+CGG | + | chr4.1:22862985-22863004 | MS.gene26565:CDS | 35.0% | |
| CACGTATTCTCAAACCAAAT+AGG | - | chr4.1:22863536-22863555 | None:intergenic | 35.0% | |
| CATCTCTTGAGATATTAGGT+AGG | + | chr4.1:22862643-22862662 | MS.gene26565:intron | 35.0% | |
| CCATTTCCTTGACAAATCTT+CGG | - | chr4.1:22863624-22863643 | None:intergenic | 35.0% | |
| GACCAATCTGATAAAAGTGA+TGG | - | chr4.1:22865466-22865485 | None:intergenic | 35.0% | |
| GATGTTTGACAAGTTATACC+AGG | + | chr4.1:22866340-22866359 | MS.gene26565:CDS | 35.0% | |
| GTGATGTCACCAAATTTACT+TGG | - | chr4.1:22866473-22866492 | None:intergenic | 35.0% | |
| GTTCTACAACCCAACTTAAA+TGG | + | chr4.1:22864169-22864188 | MS.gene26565:CDS | 35.0% | |
| GTTGTATGGAACATTGTGTT+GGG | + | chr4.1:22863212-22863231 | MS.gene26565:intron | 35.0% | |
| TAAGTCATGGTGAGAATGTT+AGG | - | chr4.1:22863715-22863734 | None:intergenic | 35.0% | |
| TAATTATTTGGCAGGGAAAG+AGG | + | chr4.1:22864404-22864423 | MS.gene26565:intron | 35.0% | |
| TATACTACCTGACAACAGAT+GGG | + | chr4.1:22864274-22864293 | MS.gene26565:CDS | 35.0% | |
| TGTCAATGTATCTCTTGTTC+AGG | + | chr4.1:22863744-22863763 | MS.gene26565:intron | 35.0% | |
| TGTTGTATGGAACATTGTGT+TGG | + | chr4.1:22863211-22863230 | MS.gene26565:intron | 35.0% | |
| TTATACTACCTGACAACAGA+TGG | + | chr4.1:22864273-22864292 | MS.gene26565:CDS | 35.0% | |
| TTCAACTGGACTTCTAATTG+TGG | + | chr4.1:22864200-22864219 | MS.gene26565:CDS | 35.0% | |
| TTGTTTCCGAAGATTTGTCA+AGG | + | chr4.1:22863615-22863634 | MS.gene26565:intron | 35.0% | |
| ! | AACCAAATAGGCTTAGTCTT+GGG | - | chr4.1:22863524-22863543 | None:intergenic | 35.0% |
| ! | AATGTTTTCTCAAACCAACC+AGG | + | chr4.1:22863688-22863707 | MS.gene26565:intron | 35.0% |
| ! | CAAAGATGAGAATGTTGCTT+TGG | + | chr4.1:22863293-22863312 | MS.gene26565:intron | 35.0% |
| ! | GATACTGGGGATTTTTCTAA+AGG | + | chr4.1:22863836-22863855 | MS.gene26565:CDS | 35.0% |
| ! | TAAGTTGGGTTGTAGAACAT+CGG | - | chr4.1:22864167-22864186 | None:intergenic | 35.0% |
| ! | TGAGGATACATTTCCCTTTT+GGG | - | chr4.1:22865055-22865074 | None:intergenic | 35.0% |
| ! | TGTGCTTGATTGGCTAAATT+AGG | + | chr4.1:22865394-22865413 | MS.gene26565:intron | 35.0% |
| ! | TTTTTGTCACCAAACGAATG+AGG | + | chr4.1:22863990-22864009 | MS.gene26565:intron | 35.0% |
| !! | AGGTGCAATTTTTCGATACT+GGG | + | chr4.1:22863822-22863841 | MS.gene26565:CDS | 35.0% |
| !! | TAGAGTTTGCTGTTGTGTAT+GGG | + | chr4.1:22864463-22864482 | MS.gene26565:CDS | 35.0% |
| !! | TGATGATGGATCTTTGCTTA+TGG | + | chr4.1:22862846-22862865 | MS.gene26565:CDS | 35.0% |
| !! | TTAGAGTTTGCTGTTGTGTA+TGG | + | chr4.1:22864462-22864481 | MS.gene26565:CDS | 35.0% |
| !! | TTTGCAGTTTTATGTTTGGC+TGG | + | chr4.1:22865279-22865298 | MS.gene26565:intron | 35.0% |
| !!! | CTTTGTTTTTTCCTTTCTGG+TGG | + | chr4.1:22865362-22865381 | MS.gene26565:intron | 35.0% |
| !!! | TTTTCAAGTTCCTAATCTCG+TGG | + | chr4.1:22862930-22862949 | MS.gene26565:CDS | 35.0% |
| AAAACAGAAGCCACGAGATT+AGG | - | chr4.1:22862943-22862962 | None:intergenic | 40.0% | |
| AAATCTAAGAAGGACCCTTG+AGG | + | chr4.1:22865148-22865167 | MS.gene26565:intron | 40.0% | |
| AATCTAAGAAGGACCCTTGA+GGG | + | chr4.1:22865149-22865168 | MS.gene26565:intron | 40.0% | |
| AATGGTCTGTGTCAAGTGAA+TGG | + | chr4.1:22865771-22865790 | MS.gene26565:CDS | 40.0% | |
| AATGTATCTCTTGTTCAGGC+CGG | + | chr4.1:22863748-22863767 | MS.gene26565:intron | 40.0% | |
| AATGTTCCATACAACATCGC+CGG | - | chr4.1:22863207-22863226 | None:intergenic | 40.0% | |
| AGAATATGACAAGGGCCAAT+TGG | + | chr4.1:22863076-22863095 | MS.gene26565:CDS | 40.0% | |
| AGGGAATATCTAGTCCAGTT+GGG | - | chr4.1:22864803-22864822 | None:intergenic | 40.0% | |
| AGGTGATATAGAAAGCTCAG+CGG | - | chr4.1:22863897-22863916 | None:intergenic | 40.0% | |
| AGTCATATTACTAGAGGCAG+AGG | + | chr4.1:22863440-22863459 | MS.gene26565:intron | 40.0% | |
| ATACTACCTGACAACAGATG+GGG | + | chr4.1:22864275-22864294 | MS.gene26565:CDS | 40.0% | |
| ATAGTAATCAAACCAAGCCC+TGG | - | chr4.1:22864578-22864597 | None:intergenic | 40.0% | |
| ATCAGAAAACATGCTATGGG+AGG | + | chr4.1:22866198-22866217 | MS.gene26565:intron | 40.0% | |
| ATGCAATGACATCTGCGAAA+AGG | - | chr4.1:22866409-22866428 | None:intergenic | 40.0% | |
| ATTATTTGGCAGGGAAAGAG+GGG | + | chr4.1:22864406-22864425 | MS.gene26565:intron | 40.0% | |
| ATTCCATGAACCATTGTAGG+GGG | + | chr4.1:22864068-22864087 | MS.gene26565:intron | 40.0% | |
| ATTTGGCACGCTGTGATTTA+GGG | + | chr4.1:22864029-22864048 | MS.gene26565:intron | 40.0% | |
| CAAACTATTTGCAGGCTGAT+TGG | + | chr4.1:22866435-22866454 | MS.gene26565:intron | 40.0% | |
| CCAGAGTCACCAAGTAAATT+TGG | + | chr4.1:22866461-22866480 | MS.gene26565:CDS | 40.0% | |
| CCGAAGATTTGTCAAGGAAA+TGG | + | chr4.1:22863621-22863640 | MS.gene26565:intron | 40.0% | |
| CTAAGTCTCCATGATTGTTG+AGG | - | chr4.1:22863965-22863984 | None:intergenic | 40.0% | |
| GAAAATAGGCTTAGGTGGTT+TGG | + | chr4.1:22863359-22863378 | MS.gene26565:intron | 40.0% | |
| GACCATTGAGCATCATGAAT+AGG | - | chr4.1:22864432-22864451 | None:intergenic | 40.0% | |
| GATGCTCAATGGTCAAATTC+AGG | + | chr4.1:22864438-22864457 | MS.gene26565:CDS | 40.0% | |
| GATGTGTGATAGGACTAGAT+GGG | + | chr4.1:22863315-22863334 | MS.gene26565:intron | 40.0% | |
| GCAAAAATTTGTACACTGGC+AGG | - | chr4.1:22864096-22864115 | None:intergenic | 40.0% | |
| GCAAACATTTGCTTCGTATG+AGG | + | chr4.1:22865668-22865687 | MS.gene26565:intron | 40.0% | |
| GCATCAATTCCTCATTCGTT+TGG | - | chr4.1:22864002-22864021 | None:intergenic | 40.0% | |
| TATTTGGCACGCTGTGATTT+AGG | + | chr4.1:22864028-22864047 | MS.gene26565:intron | 40.0% | |
| TCAGAGCTGAATTGAATTGC+CGG | - | chr4.1:22863770-22863789 | None:intergenic | 40.0% | |
| TGCATTTGTTCCAGAATCCA+AGG | + | chr4.1:22863931-22863950 | MS.gene26565:CDS | 40.0% | |
| TGTATCCTCAGCTGATGATT+TGG | + | chr4.1:22865065-22865084 | MS.gene26565:intron | 40.0% | |
| TTCCATCGGATAGTGTTGTA+AGG | - | chr4.1:22865032-22865051 | None:intergenic | 40.0% | |
| ! | ATGGGAGGATATTTTGCTGA+TGG | + | chr4.1:22866213-22866232 | MS.gene26565:intron | 40.0% |
| ! | CAAGGATTGGAACTTTGAAG+AGG | + | chr4.1:22865179-22865198 | MS.gene26565:intron | 40.0% |
| ! | CCAAATTTACTTGGTGACTC+TGG | - | chr4.1:22866464-22866483 | None:intergenic | 40.0% |
| ! | CTGAGGATACATTTCCCTTT+TGG | - | chr4.1:22865056-22865075 | None:intergenic | 40.0% |
| ! | GAAGACCATGAACTTTTTGC+AGG | + | chr4.1:22866613-22866632 | MS.gene26565:intron | 40.0% |
| ! | TCAAACAGAGTTGCTTTAGC+AGG | - | chr4.1:22864972-22864991 | None:intergenic | 40.0% |
| ! | TGATGGATCTTTGCTTATGG+TGG | + | chr4.1:22862849-22862868 | MS.gene26565:CDS | 40.0% |
| !! | CAAGGCTTCAAGTTGACAAT+GGG | + | chr4.1:22865834-22865853 | MS.gene26565:CDS | 40.0% |
| !! | GAGGTGCAATTTTTCGATAC+TGG | + | chr4.1:22863821-22863840 | MS.gene26565:CDS | 40.0% |
| !! | GGTGCAATTTTTCGATACTG+GGG | + | chr4.1:22863823-22863842 | MS.gene26565:CDS | 40.0% |
| !! | TGTTGCTTTGGATGTGTGAT+AGG | + | chr4.1:22863305-22863324 | MS.gene26565:intron | 40.0% |
| !!! | ATTTCCCTTTTGGGTTCCAT+CGG | - | chr4.1:22865046-22865065 | None:intergenic | 40.0% |
| !!! | GTTTTATGTTTGGCTGGCTT+CGG | + | chr4.1:22865285-22865304 | MS.gene26565:intron | 40.0% |
| AAACTCAACCTATGGCTCGA+CGG | + | chr4.1:22864133-22864152 | MS.gene26565:CDS | 45.0% | |
| AAGCATGGCAAAGAACCTGA+TGG | - | chr4.1:22866542-22866561 | None:intergenic | 45.0% | |
| AAGCCATAACGATACCCAAC+TGG | + | chr4.1:22864786-22864805 | MS.gene26565:intron | 45.0% | |
| AATGCAGCTACATGAGAAGC+AGG | - | chr4.1:22863917-22863936 | None:intergenic | 45.0% | |
| ACTATCCGATGGAACCCAAA+AGG | + | chr4.1:22865038-22865057 | MS.gene26565:CDS | 45.0% | |
| AGTTCGAGATACTACTGACC+TGG | - | chr4.1:22866361-22866380 | None:intergenic | 45.0% | |
| ATGGGTATGTTTGTCCACTG+TGG | + | chr4.1:22865852-22865871 | MS.gene26565:intron | 45.0% | |
| ATGGTGAGAATGTTAGGACC+TGG | - | chr4.1:22863709-22863728 | None:intergenic | 45.0% | |
| CAAGTGAATGGTCTCCAGAT+GGG | + | chr4.1:22865783-22865802 | MS.gene26565:CDS | 45.0% | |
| CACTTATGTTACTCTCGTGC+TGG | - | chr4.1:22863270-22863289 | None:intergenic | 45.0% | |
| CAGGGAATATCTAGTCCAGT+TGG | - | chr4.1:22864804-22864823 | None:intergenic | 45.0% | |
| CCATTGTCAACTTGAAGCCT+TGG | - | chr4.1:22865836-22865855 | None:intergenic | 45.0% | |
| CTATCCGATGGAACCCAAAA+GGG | + | chr4.1:22865039-22865058 | MS.gene26565:CDS | 45.0% | |
| CTATTCGAAAGCAGGACTTG+TGG | + | chr4.1:22864594-22864613 | MS.gene26565:intron | 45.0% | |
| GAAACAGCTTGCATCAACCA+AGG | + | chr4.1:22865745-22865764 | MS.gene26565:CDS | 45.0% | |
| GAAGAATGCTCACTATGGAC+TGG | + | chr4.1:22862754-22862773 | MS.gene26565:CDS | 45.0% | |
| GATTGGGGGAAAATAGGCTT+AGG | + | chr4.1:22863351-22863370 | MS.gene26565:intron | 45.0% | |
| GGAGAACATACCATATCACC+AGG | - | chr4.1:22865318-22865337 | None:intergenic | 45.0% | |
| GGATGTGTGATAGGACTAGA+TGG | + | chr4.1:22863314-22863333 | MS.gene26565:intron | 45.0% | |
| GGCCTATTCATGATGCTCAA+TGG | + | chr4.1:22864427-22864446 | MS.gene26565:CDS | 45.0% | |
| GTCATGAAATAGCACCCATC+TGG | - | chr4.1:22865800-22865819 | None:intergenic | 45.0% | |
| GTCCATAGTGAGCATTCTTC+CGG | - | chr4.1:22862754-22862773 | None:intergenic | 45.0% | |
| GTCCTTACAACACTATCCGA+TGG | + | chr4.1:22865027-22865046 | MS.gene26565:CDS | 45.0% | |
| GTGATAGGACTAGATGGGAT+AGG | + | chr4.1:22863320-22863339 | MS.gene26565:intron | 45.0% | |
| GTTTGCAAATAAGTTCCGCG+AGG | - | chr4.1:22862970-22862989 | None:intergenic | 45.0% | |
| TAAGACTGCAGCTGCTATTC+AGG | + | chr4.1:22866726-22866745 | MS.gene26565:CDS | 45.0% | |
| TCAAGTGAATGGTCTCCAGA+TGG | + | chr4.1:22865782-22865801 | MS.gene26565:CDS | 45.0% | |
| TCTGTGCTCCTCAACAATCA+TGG | + | chr4.1:22863954-22863973 | MS.gene26565:intron | 45.0% | |
| TGAGAATGTTAGGACCTGGT+TGG | - | chr4.1:22863705-22863724 | None:intergenic | 45.0% | |
| TGATGCCAAATCATCAGCTG+AGG | - | chr4.1:22865073-22865092 | None:intergenic | 45.0% | |
| TGCCCAAGACTAAGCCTATT+TGG | + | chr4.1:22863519-22863538 | MS.gene26565:intron | 45.0% | |
| TGCTTCCCAAACTCAACCTA+TGG | + | chr4.1:22864125-22864144 | MS.gene26565:CDS | 45.0% | |
| TGGGTATGTTTGTCCACTGT+GGG | + | chr4.1:22865853-22865872 | MS.gene26565:intron | 45.0% | |
| TTAAGACCGGCGATGTTGTA+TGG | + | chr4.1:22863198-22863217 | MS.gene26565:intron | 45.0% | |
| TTGCATCAACCAAGGCTGAA+TGG | + | chr4.1:22865753-22865772 | MS.gene26565:CDS | 45.0% | |
| TTGCTTAAGATACCAGGGCT+TGG | + | chr4.1:22864563-22864582 | MS.gene26565:intron | 45.0% | |
| TTTGGCACGCTGTGATTTAG+GGG | + | chr4.1:22864030-22864049 | MS.gene26565:intron | 45.0% | |
| ! | AAGAGGCTTTTGTAGTGGCT+TGG | - | chr4.1:22866657-22866676 | None:intergenic | 45.0% |
| ! | AGAGGCTTTTGTAGTGGCTT+GGG | - | chr4.1:22866656-22866675 | None:intergenic | 45.0% |
| ! | AGTCCAGTTGGGTATCGTTA+TGG | - | chr4.1:22864792-22864811 | None:intergenic | 45.0% |
| ! | CAACATAATCAGAGTGCCCA+TGG | - | chr4.1:22865926-22865945 | None:intergenic | 45.0% |
| ! | GTTTGTCGGTTAAGAGTTCC+AGG | + | chr4.1:22863863-22863882 | MS.gene26565:CDS | 45.0% |
| ! | TCGAGCCATAGGTTGAGTTT+GGG | - | chr4.1:22864133-22864152 | None:intergenic | 45.0% |
| ! | TGGTTTTTGTGCAGTTGGGT+TGG | - | chr4.1:22866683-22866702 | None:intergenic | 45.0% |
| !! | CCAAGGCTTCAAGTTGACAA+TGG | + | chr4.1:22865833-22865852 | MS.gene26565:CDS | 45.0% |
| !!! | GTTTGTTTTAGTTCGACGGC+CGG | + | chr4.1:22862732-22862751 | MS.gene26565:intron | 45.0% |
| AAAAAGCTCCGTCGAGCCAT+AGG | - | chr4.1:22864144-22864163 | None:intergenic | 50.0% | |
| ACAACAGATGGGGTGCATGA+AGG | + | chr4.1:22864285-22864304 | MS.gene26565:CDS | 50.0% | |
| AGAAGGACCCTTGAGGGTTA+TGG | + | chr4.1:22865155-22865174 | MS.gene26565:intron | 50.0% | |
| AGTAGATCAAGACCCCACAG+TGG | - | chr4.1:22865869-22865888 | None:intergenic | 50.0% | |
| ATCCTTGCCCATAACCCTCA+AGG | - | chr4.1:22865166-22865185 | None:intergenic | 50.0% | |
| ATGCCGTGTGCCAACTAATG+AGG | + | chr4.1:22863802-22863821 | MS.gene26565:CDS | 50.0% | |
| ATTAGTTGGCACACGGCATG+CGG | - | chr4.1:22863801-22863820 | None:intergenic | 50.0% | |
| GAACCCCCTACAATGGTTCA+TGG | - | chr4.1:22864074-22864093 | None:intergenic | 50.0% | |
| GAAGGACCCTTGAGGGTTAT+GGG | + | chr4.1:22865156-22865175 | MS.gene26565:intron | 50.0% | |
| GACATTCTTATCTTGCGGCC+CGG | - | chr4.1:22863007-22863026 | None:intergenic | 50.0% | |
| GCACCTCATTAGTTGGCACA+CGG | - | chr4.1:22863808-22863827 | None:intergenic | 50.0% | |
| GCAGTTGTTAGGAGAGAGCT+CGG | + | chr4.1:22866982-22867001 | MS.gene26565:intron | 50.0% | |
| GGGTATGTTTGTCCACTGTG+GGG | + | chr4.1:22865854-22865873 | MS.gene26565:intron | 50.0% | |
| GTTCTTCATCGTCCTCGTGT+TGG | - | chr4.1:22863248-22863267 | None:intergenic | 50.0% | |
| TCCTTGCCCATAACCCTCAA+GGG | - | chr4.1:22865165-22865184 | None:intergenic | 50.0% | |
| TGACACAGACCATTCAGCCT+TGG | - | chr4.1:22865765-22865784 | None:intergenic | 50.0% | |
| TGACAGCAACAACAGCTCCA+AGG | + | chr4.1:22865816-22865835 | MS.gene26565:CDS | 50.0% | |
| TGACATTCGGTTGACCGTTC+TGG | - | chr4.1:22862789-22862808 | None:intergenic | 50.0% | |
| TGAGGGTTATGGGCAAGGAT+TGG | + | chr4.1:22865166-22865185 | MS.gene26565:intron | 50.0% | |
| TGGGGGAAAATAGGCTTAGG+TGG | + | chr4.1:22863354-22863373 | MS.gene26565:intron | 50.0% | |
| ! | CAAGAAGTGCAGACCTCTAC+TGG | + | chr4.1:22864992-22865011 | MS.gene26565:CDS | 50.0% |
| ! | CGGTAACTTGCCTGGTGATA+TGG | + | chr4.1:22865305-22865324 | MS.gene26565:CDS | 50.0% |
| ! | GGCAGAAGAGGCTTTTGTAG+TGG | - | chr4.1:22866662-22866681 | None:intergenic | 50.0% |
| ! | GTCGAGCCATAGGTTGAGTT+TGG | - | chr4.1:22864134-22864153 | None:intergenic | 50.0% |
| ! | TTGTTGAGGAGCACAGACCT+TGG | - | chr4.1:22863951-22863970 | None:intergenic | 50.0% |
| !! | GCTTTTGTAGTGGCTTGGGT+TGG | - | chr4.1:22866652-22866671 | None:intergenic | 50.0% |
| !! | GTAGTGGCTTGGGTTGGTTT+AGG | - | chr4.1:22866646-22866665 | None:intergenic | 50.0% |
| !! | GTTGACCGTTCTGGAATGGA+GGG | - | chr4.1:22862780-22862799 | None:intergenic | 50.0% |
| !! | TTCGGTTGACCGTTCTGGAA+TGG | - | chr4.1:22862784-22862803 | None:intergenic | 50.0% |
| !!! | CGGCTGGTTTTTGTGCAGTT+GGG | - | chr4.1:22866687-22866706 | None:intergenic | 50.0% |
| ACCCTTGAGGGTTATGGGCA+AGG | + | chr4.1:22865161-22865180 | MS.gene26565:intron | 55.0% | |
| ACTGGCCCTCCATTCCAGAA+CGG | + | chr4.1:22862772-22862791 | MS.gene26565:CDS | 55.0% | |
| AGCATGCGGTGGACGATATG+CGG | - | chr4.1:22866707-22866726 | None:intergenic | 55.0% | |
| CATGCACCCCATCTGTTGTC+AGG | - | chr4.1:22864284-22864303 | None:intergenic | 55.0% | |
| CCAGTTCCAAGCTCCAGTAG+AGG | - | chr4.1:22865008-22865027 | None:intergenic | 55.0% | |
| CCTCTACTGGAGCTTGGAAC+TGG | + | chr4.1:22865005-22865024 | MS.gene26565:CDS | 55.0% | |
| GAGAGAGCTCGGCTGAGTAA+AGG | + | chr4.1:22866993-22867012 | MS.gene26565:CDS | 55.0% | |
| GCAGCTGCAGTCTTAGCATG+CGG | - | chr4.1:22866721-22866740 | None:intergenic | 55.0% | |
| GGAGCACAGACCTTGGATTC+TGG | - | chr4.1:22863944-22863963 | None:intergenic | 55.0% | |
| GGCCGGAAGAATGCTCACTA+TGG | + | chr4.1:22862749-22862768 | MS.gene26565:CDS | 55.0% | |
| GGCGATGAAGAACCAACACG+AGG | + | chr4.1:22863233-22863252 | MS.gene26565:intron | 55.0% | |
| TGCAGACCTCTACTGGAGCT+TGG | + | chr4.1:22864999-22865018 | MS.gene26565:CDS | 55.0% | |
| TGCAGCTGCTATTCAGGCAG+AGG | + | chr4.1:22866732-22866751 | MS.gene26565:CDS | 55.0% | |
| TTCTTATCTTGCGGCCCGGA+AGG | - | chr4.1:22863003-22863022 | None:intergenic | 55.0% | |
| ! | GCTTCTGTTTTGTCGCCTCG+CGG | + | chr4.1:22862952-22862971 | MS.gene26565:CDS | 55.0% |
| !! | GGTTGACCGTTCTGGAATGG+AGG | - | chr4.1:22862781-22862800 | None:intergenic | 55.0% |
| !! | TGCAGTTGGGTTGGCAGAAG+AGG | - | chr4.1:22866674-22866693 | None:intergenic | 55.0% |
| !!! | GCGGCTGGTTTTTGTGCAGT+TGG | - | chr4.1:22866688-22866707 | None:intergenic | 55.0% |
| AGCTCAGCGGAAGCAACTCC+TGG | - | chr4.1:22863884-22863903 | None:intergenic | 60.0% | |
| CTGGCAGGAACCCCCTACAA+TGG | - | chr4.1:22864081-22864100 | None:intergenic | 60.0% | |
| GCTGCAGTCTTAGCATGCGG+TGG | - | chr4.1:22866718-22866737 | None:intergenic | 60.0% | |
| ! | CTTGCGGCCCGGAAGGTTTT+TGG | - | chr4.1:22862996-22863015 | None:intergenic | 60.0% |
| ! | GCTGGCTTCGGTAACTTGCC+TGG | + | chr4.1:22865297-22865316 | MS.gene26565:CDS | 60.0% |
| TGCGGTGGACGATATGCGGC+TGG | - | chr4.1:22866703-22866722 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 22862639 | 22867012 | 22862639 | ID=MS.gene26565 |
| chr4.1 | mRNA | 22862639 | 22867012 | 22862639 | ID=MS.gene26565.t1;Parent=MS.gene26565 |
| chr4.1 | exon | 22862639 | 22862660 | 22862639 | ID=MS.gene26565.t1.exon1;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22862639 | 22862660 | 22862639 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22862743 | 22863097 | 22862743 | ID=MS.gene26565.t1.exon2;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22862743 | 22863097 | 22862743 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22863766 | 22863952 | 22863766 | ID=MS.gene26565.t1.exon3;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22863766 | 22863952 | 22863766 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22864087 | 22864321 | 22864087 | ID=MS.gene26565.t1.exon4;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22864087 | 22864321 | 22864087 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22864418 | 22864486 | 22864418 | ID=MS.gene26565.t1.exon5;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22864418 | 22864486 | 22864418 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22864964 | 22865065 | 22864964 | ID=MS.gene26565.t1.exon6;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22864964 | 22865065 | 22864964 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22865286 | 22865326 | 22865286 | ID=MS.gene26565.t1.exon7;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22865286 | 22865326 | 22865286 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22865722 | 22865855 | 22865722 | ID=MS.gene26565.t1.exon8;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22865722 | 22865855 | 22865722 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22866298 | 22866361 | 22866298 | ID=MS.gene26565.t1.exon9;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22866298 | 22866361 | 22866298 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22866449 | 22866545 | 22866449 | ID=MS.gene26565.t1.exon10;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22866449 | 22866545 | 22866449 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22866635 | 22866753 | 22866635 | ID=MS.gene26565.t1.exon11;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22866635 | 22866753 | 22866635 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| chr4.1 | exon | 22866986 | 22867012 | 22866986 | ID=MS.gene26565.t1.exon12;Parent=MS.gene26565.t1 |
| chr4.1 | CDS | 22866986 | 22867012 | 22866986 | ID=cds.MS.gene26565.t1;Parent=MS.gene26565.t1 |
| Gene Sequence |
| Protein sequence |
