Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52223.t1 | XP_003608061.1 | 98 | 404 | 8 | 0 | 12 | 415 | 75 | 478 | 6.10E-235 | 823.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52223.t1 | O74965 | 38.6 | 391 | 219 | 7 | 25 | 410 | 82 | 456 | 1.4e-75 | 285.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52223.t1 | G7JNL0 | 98.0 | 404 | 8 | 0 | 12 | 415 | 75 | 478 | 4.4e-235 | 823.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004699 | MS.gene52223 | PPI |
| MS.gene57305 | MS.gene52223 | PPI |
| MS.gene52223 | MS.gene58159 | PPI |
| MS.gene52223 | MS.gene83444 | PPI |
| MS.gene048301 | MS.gene52223 | PPI |
| MS.gene02854 | MS.gene52223 | PPI |
| MS.gene030707 | MS.gene52223 | PPI |
| MS.gene036254 | MS.gene52223 | PPI |
| MS.gene28161 | MS.gene52223 | PPI |
| MS.gene52223 | MS.gene70303 | PPI |
| MS.gene030823 | MS.gene52223 | PPI |
| MS.gene029211 | MS.gene52223 | PPI |
| MS.gene52223 | MS.gene003175 | PPI |
| MS.gene023135 | MS.gene52223 | PPI |
| MS.gene35140 | MS.gene52223 | PPI |
| MS.gene93131 | MS.gene52223 | PPI |
| MS.gene028153 | MS.gene52223 | PPI |
| MS.gene037362 | MS.gene52223 | PPI |
| MS.gene36472 | MS.gene52223 | PPI |
| MS.gene40016 | MS.gene52223 | PPI |
| MS.gene01984 | MS.gene52223 | PPI |
| MS.gene32083 | MS.gene52223 | PPI |
| MS.gene72768 | MS.gene52223 | PPI |
| MS.gene82426 | MS.gene52223 | PPI |
| MS.gene028318 | MS.gene52223 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52223.t1 | MTR_4g087280 | 98.190 | 442 | 8 | 0 | 12 | 453 | 75 | 516 | 0.0 | 904 |
| MS.gene52223.t1 | MTR_4g087280 | 97.794 | 408 | 9 | 0 | 12 | 419 | 75 | 482 | 0.0 | 841 |
| MS.gene52223.t1 | MTR_5g091610 | 69.892 | 93 | 16 | 2 | 275 | 367 | 126 | 206 | 6.34e-36 | 134 |
| MS.gene52223.t1 | MTR_3g105430 | 25.549 | 364 | 232 | 14 | 24 | 357 | 260 | 614 | 1.65e-22 | 101 |
| MS.gene52223.t1 | MTR_2g088350 | 97.436 | 39 | 1 | 0 | 340 | 378 | 1 | 39 | 5.56e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52223.t1 | AT1G73180 | 68.140 | 430 | 132 | 2 | 5 | 433 | 64 | 489 | 0.0 | 636 |
| MS.gene52223.t1 | AT1G73180 | 68.269 | 416 | 127 | 2 | 5 | 419 | 64 | 475 | 0.0 | 620 |
| MS.gene52223.t1 | AT5G27640 | 25.414 | 362 | 232 | 13 | 24 | 355 | 283 | 636 | 1.85e-23 | 103 |
| MS.gene52223.t1 | AT5G27640 | 25.414 | 362 | 232 | 13 | 24 | 355 | 257 | 610 | 2.17e-23 | 103 |
| MS.gene52223.t1 | AT5G27640 | 25.414 | 362 | 232 | 13 | 24 | 355 | 257 | 610 | 2.17e-23 | 103 |
| MS.gene52223.t1 | AT5G25780 | 25.000 | 364 | 234 | 14 | 24 | 357 | 258 | 612 | 3.52e-22 | 100 |
Find 100 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGTTGTTCTAGGTATTT+TGG | 0.145052 | 7.4:+28832030 | MS.gene52223:intron |
| CTGAGGATACATTTCCCTTT+TGG | 0.184033 | 7.4:-28831375 | None:intergenic |
| GTTCGACAACCCAACTTAAA+TGG | 0.232051 | 7.4:+28830560 | MS.gene52223:CDS |
| GTAGAAACTTGGGTTAGTTT+TGG | 0.293588 | 7.4:-28832978 | None:intergenic |
| TGGTAACTTGCCTGGTGATA+TGG | 0.298473 | 7.4:+28831634 | MS.gene52223:CDS |
| TAAGACTGCAGCTGCTATTC+AGG | 0.307860 | 7.4:+28833061 | MS.gene52223:CDS |
| CCAAGGCTTCAAGTTGATAA+TGG | 0.310346 | 7.4:+28832155 | MS.gene52223:CDS |
| TGATATTCGGCTGACCGTTC+TGG | 0.314919 | 7.4:-28829084 | None:intergenic |
| GGAGAAACAGAAGGAGAAAA+AGG | 0.336853 | 7.4:+28833468 | MS.gene52223:CDS |
| AGCTCAGCGGAAGCAACTCC+TGG | 0.358438 | 7.4:-28830274 | None:intergenic |
| TTAGAGTTTGCTGTTGTGTA+TGG | 0.359900 | 7.4:+28830853 | MS.gene52223:CDS |
| AAAACAAATCAGAGTTACTA+TGG | 0.360928 | 7.4:+28830631 | MS.gene52223:CDS |
| TCATGTAGCTGCATTTGTTC+CGG | 0.362478 | 7.4:+28830315 | MS.gene52223:CDS |
| GACGCTCAATGGTCAAATTC+AGG | 0.376136 | 7.4:+28830829 | MS.gene52223:CDS |
| GTCCTTACAACACTATTAGA+TGG | 0.377426 | 7.4:+28831349 | MS.gene52223:CDS |
| GCTGGCTTTGGTAACTTGCC+TGG | 0.385881 | 7.4:+28831626 | MS.gene52223:CDS |
| AACCATGATTCCATTTAAGT+TGG | 0.389606 | 7.4:-28830570 | None:intergenic |
| TCAGAACTGAATTGAATTGC+CGG | 0.391942 | 7.4:-28830160 | None:intergenic |
| GTTTGTCGGTTAAGAGTTCC+AGG | 0.393269 | 7.4:+28830256 | MS.gene52223:CDS |
| CAAGAAGTGCAGACCTCTAC+TGG | 0.395633 | 7.4:+28831314 | MS.gene52223:CDS |
| TGCTTCCCAAAGTCAACCTT+TGG | 0.397006 | 7.4:+28830516 | MS.gene52223:CDS |
| GATTTGTATTTGCAGTTGTT+AGG | 0.397376 | 7.4:+28833307 | MS.gene52223:intron |
| CCAGAGTCACCAAGTAAGTT+TGG | 0.409258 | 7.4:+28832796 | MS.gene52223:CDS |
| GACCATTGAGCGTCATGAAT+AGG | 0.411012 | 7.4:-28830820 | None:intergenic |
| GTCGAGCCAAAGGTTGACTT+TGG | 0.418629 | 7.4:-28830522 | None:intergenic |
| AAATGGAATCATGGTTCAAC+TGG | 0.419644 | 7.4:+28830577 | MS.gene52223:CDS |
| GGGGCACAAACCTTGGATTC+CGG | 0.423896 | 7.4:-28830334 | None:intergenic |
| AAGAGGCTTTGGTAGAAACT+TGG | 0.424743 | 7.4:-28832989 | None:intergenic |
| AAAACAGAAGCGACAAGATT+AGG | 0.427290 | 7.4:-28829238 | None:intergenic |
| CCATTATCAACTTGAAGCCT+TGG | 0.436250 | 7.4:-28832155 | None:intergenic |
| CATGCACCCCATCTGTTGTC+AGG | 0.436554 | 7.4:-28830672 | None:intergenic |
| CAAGGCTTCAAGTTGATAAT+GGG | 0.439727 | 7.4:+28832156 | MS.gene52223:CDS |
| TGGGTTGGCAGAAGAGGCTT+TGG | 0.441015 | 7.4:-28833000 | None:intergenic |
| TGCAGTTGGGTTGGCAGAAG+AGG | 0.444560 | 7.4:-28833006 | None:intergenic |
| AGAATATGACAAGGGCCAAT+TGG | 0.452350 | 7.4:+28829374 | MS.gene52223:CDS |
| ACCATGATGCAATCACGAAC+TGG | 0.453181 | 7.4:-28833503 | None:intergenic |
| TTCTTATCTTGCGGCCCGGA+AGG | 0.454027 | 7.4:-28829298 | None:intergenic |
| CCAAACTTACTTGGTGACTC+TGG | 0.455157 | 7.4:-28832796 | None:intergenic |
| TAAATATTTGGCAGGGAAAG+AGG | 0.456809 | 7.4:+28830795 | MS.gene52223:intron |
| TCAAACAGAGTTGCTTTAGC+AGG | 0.461231 | 7.4:-28831291 | None:intergenic |
| TTTCTAAAGGAGTTGTTTGT+CGG | 0.461423 | 7.4:+28830242 | MS.gene52223:CDS |
| ACTATTAGATGGAACCCAAA+AGG | 0.463751 | 7.4:+28831360 | MS.gene52223:CDS |
| ACCATGATTCCATTTAAGTT+GGG | 0.465601 | 7.4:-28830569 | None:intergenic |
| GGCCGGAAGAATGCTCGCTA+TGG | 0.467388 | 7.4:+28829047 | None:intergenic |
| GTGATGTCACCAAACTTACT+TGG | 0.470252 | 7.4:-28832805 | None:intergenic |
| GTCATGAAATAGCACCCATC+TGG | 0.472938 | 7.4:-28832119 | None:intergenic |
| AAGATAAGAATGTCACGTTA+TGG | 0.474442 | 7.4:+28829311 | MS.gene52223:CDS |
| TCATATTCTTCTGAGAATGT+TGG | 0.477460 | 7.4:-28829360 | None:intergenic |
| CCTCTACTGGAGCTTGGAAC+TGG | 0.479313 | 7.4:+28831327 | MS.gene52223:CDS |
| TAGAGTTTGCTGTTGTGTAT+GGG | 0.481102 | 7.4:+28830854 | MS.gene52223:CDS |
| TCGAGCCAAAGGTTGACTTT+GGG | 0.484901 | 7.4:-28830521 | None:intergenic |
| TTGCATCAACCAAGGCTGAA+TGG | 0.489961 | 7.4:+28832075 | MS.gene52223:CDS |
| GCAAATAACTGTACACTAGC+AGG | 0.495599 | 7.4:-28830484 | None:intergenic |
| AAATATTTGGCAGGGAAAGA+GGG | 0.495759 | 7.4:+28830796 | MS.gene52223:intron |
| TTCCATCTAATAGTGTTGTA+AGG | 0.499388 | 7.4:-28831351 | None:intergenic |
| ACCCAACTTAAATGGAATCA+TGG | 0.499990 | 7.4:+28830568 | MS.gene52223:CDS |
| TGCAGACCTCTACTGGAGCT+TGG | 0.507684 | 7.4:+28831321 | MS.gene52223:CDS |
| GGCCTATTCATGACGCTCAA+TGG | 0.507777 | 7.4:+28830818 | MS.gene52223:CDS |
| AATGGTCTGTGTCAAGTGAA+TGG | 0.511021 | 7.4:+28832093 | MS.gene52223:CDS |
| AGAGGCTTTGGTAGAAACTT+GGG | 0.517544 | 7.4:-28832988 | None:intergenic |
| CTATTAGATGGAACCCAAAA+GGG | 0.520250 | 7.4:+28831361 | MS.gene52223:CDS |
| ACCGTTCTGGAATGGAGGGC+CGG | 0.520529 | 7.4:-28829071 | None:intergenic |
| GACATTCTTATCTTGCGGCC+CGG | 0.523594 | 7.4:-28829302 | None:intergenic |
| TGACACAGACCATTCAGCCT+TGG | 0.524004 | 7.4:-28832084 | None:intergenic |
| TTATACTACCTGACAACAGA+TGG | 0.526764 | 7.4:+28830664 | MS.gene52223:CDS |
| GGCTGACCGTTCTGGAATGG+AGG | 0.527129 | 7.4:-28829076 | None:intergenic |
| TTCGGCTGACCGTTCTGGAA+TGG | 0.531168 | 7.4:-28829079 | None:intergenic |
| TGCATTTGTTCCGGAATCCA+AGG | 0.531572 | 7.4:+28830324 | MS.gene52223:CDS |
| AACTTGAAGCCTTGGAGCTG+TGG | 0.534236 | 7.4:-28832147 | None:intergenic |
| GAAGAATGCTCGCTATGGAC+CGG | 0.535203 | 7.4:+28829052 | None:intergenic |
| GCAGTTGTTAGGAGAGAGCT+CGG | 0.541868 | 7.4:+28833318 | MS.gene52223:intron |
| AATGCAGCTACATGAGAAGC+AGG | 0.553166 | 7.4:-28830307 | None:intergenic |
| ACAACAGATGGGGTGCATGA+AGG | 0.565598 | 7.4:+28830676 | MS.gene52223:CDS |
| TGCAGCTGCTATTCAGGCAG+AGG | 0.568714 | 7.4:+28833067 | MS.gene52223:CDS |
| TAAGTTGGGTTGTCGAACAT+CGG | 0.570920 | 7.4:-28830555 | None:intergenic |
| TATACTACCTGACAACAGAT+GGG | 0.573112 | 7.4:+28830665 | MS.gene52223:CDS |
| AAAGTCAACCTTTGGCTCGA+CGG | 0.574610 | 7.4:+28830524 | MS.gene52223:CDS |
| TGTGGTGGACGATATGCAGC+AGG | 0.576118 | 7.4:-28833035 | None:intergenic |
| GCTGACCGTTCTGGAATGGA+GGG | 0.578157 | 7.4:-28829075 | None:intergenic |
| ATGTCGCGTGCCAACTAATG+AGG | 0.581366 | 7.4:+28830195 | MS.gene52223:CDS |
| AGTGTACAGTTATTTGCTTG+TGG | 0.590507 | 7.4:+28830490 | MS.gene52223:CDS |
| CAAGTGAATGGTCTCCAGAT+GGG | 0.601629 | 7.4:+28832105 | MS.gene52223:CDS |
| AATATTTGGCAGGGAAAGAG+GGG | 0.604036 | 7.4:+28830797 | MS.gene52223:intron |
| TCAAGTGAATGGTCTCCAGA+TGG | 0.615111 | 7.4:+28832104 | MS.gene52223:CDS |
| CCAGTTCCAAGCTCCAGTAG+AGG | 0.620222 | 7.4:-28831327 | None:intergenic |
| AACGTGACATTCTTATCTTG+CGG | 0.626243 | 7.4:-28829307 | None:intergenic |
| TTCAACTGGACTTCTAATTG+TGG | 0.628741 | 7.4:+28830591 | MS.gene52223:CDS |
| ACGTTATGGAAGATTCAGAC+TGG | 0.630745 | 7.4:+28829325 | MS.gene52223:CDS |
| GCTGCAGTCTTAGCATGTGG+TGG | 0.635325 | 7.4:-28833050 | None:intergenic |
| GATGTTTGACAAGTTATACC+AGG | 0.635363 | 7.4:+28832675 | MS.gene52223:CDS |
| TGACAGCAACCACAGCTCCA+AGG | 0.639497 | 7.4:+28832138 | MS.gene52223:CDS |
| GGAGAACATACCATATCACC+AGG | 0.651350 | 7.4:-28831644 | None:intergenic |
| ACCGGCCCTCCATTCCAGAA+CGG | 0.667122 | 7.4:+28829070 | MS.gene52223:CDS |
| GAAACAGCTTGCATCAACCA+AGG | 0.668592 | 7.4:+28832067 | MS.gene52223:CDS |
| GCAGCTGCAGTCTTAGCATG+TGG | 0.669332 | 7.4:-28833053 | None:intergenic |
| TTCTCAGAAGAATATGACAA+GGG | 0.672557 | 7.4:+28829366 | MS.gene52223:CDS |
| ATTCTCAGAAGAATATGACA+AGG | 0.693333 | 7.4:+28829365 | MS.gene52223:CDS |
| ATACTACCTGACAACAGATG+GGG | 0.704485 | 7.4:+28830666 | MS.gene52223:CDS |
| AGGTGAAATAGAAAGCTCAG+CGG | 0.730816 | 7.4:-28830287 | None:intergenic |
| GTTTGCAAATAAGTTCCGCG+AGG | 0.750889 | 7.4:-28829265 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTGTGTTTTAAATATT+TGG | + | chr7.4:28830783-28830802 | MS.gene52223:intron | 10.0% |
| !!! | ATCATAATTTTATTTTCTAT+CGG | - | chr7.4:28831769-28831788 | None:intergenic | 10.0% |
| !! | AACATAATAATTTAATCAGT+CGG | - | chr7.4:28831669-28831688 | None:intergenic | 15.0% |
| !! | TAATAAAATCTATTGATCTA+TGG | - | chr7.4:28832290-28832309 | None:intergenic | 15.0% |
| !! | TATTAATAAAAAACTATGCA+GGG | - | chr7.4:28831159-28831178 | None:intergenic | 15.0% |
| !! | TTTGAATAGAAACAATTAAT+AGG | - | chr7.4:28833115-28833134 | None:intergenic | 15.0% |
| !!! | ATAAACAATTGAATATTTTC+AGG | - | chr7.4:28832198-28832217 | None:intergenic | 15.0% |
| !!! | TCATAATTTTATTTTCTATC+GGG | - | chr7.4:28831768-28831787 | None:intergenic | 15.0% |
| !! | AAGAAACTTAAAACAAAGAA+AGG | - | chr7.4:28833365-28833384 | None:intergenic | 20.0% |
| !! | AAGAAATATTAGAATAAGCA+TGG | - | chr7.4:28832892-28832911 | None:intergenic | 20.0% |
| !! | AATAATATAAGCAATTCTCA+TGG | + | chr7.4:28831846-28831865 | MS.gene52223:intron | 20.0% |
| !! | AATATCAAACTTGATAAAGT+TGG | + | chr7.4:28829100-28829119 | MS.gene52223:intron | 20.0% |
| !! | AATGTTGAAAATAACGTTTA+TGG | - | chr7.4:28831875-28831894 | None:intergenic | 20.0% |
| !! | AATTGTTTATCTTTATCCAT+GGG | + | chr7.4:28832208-28832227 | MS.gene52223:intron | 20.0% |
| !! | ACATAATAATTTAATCAGTC+GGG | - | chr7.4:28831668-28831687 | None:intergenic | 20.0% |
| !! | ACTTTATCAAGTTTGATATT+CGG | - | chr7.4:28829100-28829119 | None:intergenic | 20.0% |
| !! | AGAAACTTAAAACAAAGAAA+GGG | - | chr7.4:28833364-28833383 | None:intergenic | 20.0% |
| !! | ATATATAGTAATGACAGAAT+TGG | - | chr7.4:28829179-28829198 | None:intergenic | 20.0% |
| !! | CTATTAATAAAAAACTATGC+AGG | - | chr7.4:28831160-28831179 | None:intergenic | 20.0% |
| !! | GAATGAAAAATAAGGATTAA+AGG | - | chr7.4:28831234-28831253 | None:intergenic | 20.0% |
| !!! | AAATCTAAAATTAAATCCCT+TGG | - | chr7.4:28832390-28832409 | None:intergenic | 20.0% |
| !!! | AAGATCACTTTATTGTTTTT+TGG | + | chr7.4:28830992-28831011 | MS.gene52223:intron | 20.0% |
| !!! | AGATCACTTTATTGTTTTTT+GGG | + | chr7.4:28830993-28831012 | MS.gene52223:intron | 20.0% |
| !!! | ATAACTGAAGTTTTTATTTC+TGG | + | chr7.4:28831916-28831935 | MS.gene52223:intron | 20.0% |
| !!! | ATCAAGATTTTTCACTATAA+TGG | + | chr7.4:28832634-28832653 | MS.gene52223:CDS | 20.0% |
| !!! | ATTTCTCGTATAGTTTTTAT+AGG | - | chr7.4:28829708-28829727 | None:intergenic | 20.0% |
| !!! | ATTTTGATATTTTCTGAAGA+TGG | + | chr7.4:28830910-28830929 | MS.gene52223:intron | 20.0% |
| !!! | ATTTTTCATTATGTTGTTCT+AGG | + | chr7.4:28832022-28832041 | MS.gene52223:intron | 20.0% |
| !!! | CATAATTTTATTTTCTATCG+GGG | - | chr7.4:28831767-28831786 | None:intergenic | 20.0% |
| !!! | TCAAGATTTTTCACTATAAT+GGG | + | chr7.4:28832635-28832654 | MS.gene52223:CDS | 20.0% |
| !!! | TCATATAAAGTATCTAAATC+TGG | + | chr7.4:28831547-28831566 | MS.gene52223:intron | 20.0% |
| !!! | TTAATTTGATGACATTTATG+AGG | + | chr7.4:28832500-28832519 | MS.gene52223:intron | 20.0% |
| ! | AAAACAAATCAGAGTTACTA+TGG | + | chr7.4:28830631-28830650 | MS.gene52223:CDS | 25.0% |
| ! | AATCAATCTGATAAAAGTGA+TGG | - | chr7.4:28831795-28831814 | None:intergenic | 25.0% |
| ! | AATGAAAAATGCTTTCTTAG+TGG | - | chr7.4:28832588-28832607 | None:intergenic | 25.0% |
| ! | AGAAACAATTAATAGGTCAT+TGG | - | chr7.4:28833108-28833127 | None:intergenic | 25.0% |
| ! | ATTCAACAATACATACCAAT+TGG | - | chr7.4:28829392-28829411 | None:intergenic | 25.0% |
| ! | CAAAATATCTTCCACAAATA+AGG | - | chr7.4:28831705-28831724 | None:intergenic | 25.0% |
| ! | CAAAATTGTTATACTCATTG+TGG | - | chr7.4:28830770-28830789 | None:intergenic | 25.0% |
| ! | CAATTGTTTATCTTTATCCA+TGG | + | chr7.4:28832207-28832226 | MS.gene52223:intron | 25.0% |
| ! | CTTCTTAGATTTAAAAGAGA+GGG | - | chr7.4:28831472-28831491 | None:intergenic | 25.0% |
| ! | TAACGAGTTAGATCAAAATA+TGG | + | chr7.4:28829749-28829768 | MS.gene52223:intron | 25.0% |
| ! | TCACTTGGTTATATATAACT+TGG | + | chr7.4:28832418-28832437 | MS.gene52223:intron | 25.0% |
| ! | TGAATCATGATAGAACATTA+TGG | + | chr7.4:28829776-28829795 | MS.gene52223:intron | 25.0% |
| ! | TGACCTAAAATAATAACCAT+TGG | - | chr7.4:28833413-28833432 | None:intergenic | 25.0% |
| ! | TGGTATGTATTGTTGAATTA+TGG | + | chr7.4:28829394-28829413 | MS.gene52223:intron | 25.0% |
| ! | TTTAAAGAAGAACTGATGAT+TGG | + | chr7.4:28830733-28830752 | MS.gene52223:intron | 25.0% |
| ! | TTTACGAAACAAGAAAAAGA+GGG | + | chr7.4:28833447-28833466 | MS.gene52223:CDS | 25.0% |
| !! | AACTCTTTGAAAATAACAGT+AGG | + | chr7.4:28831039-28831058 | MS.gene52223:intron | 25.0% |
| !! | AAGAAAATAAAAGCAGCTTT+TGG | - | chr7.4:28832267-28832286 | None:intergenic | 25.0% |
| !! | ACTGCAAATACAAATCATTT+TGG | - | chr7.4:28833303-28833322 | None:intergenic | 25.0% |
| !! | ATGCCAATGGTTATTATTTT+AGG | + | chr7.4:28833407-28833426 | MS.gene52223:intron | 25.0% |
| !! | TTATTTTCGAAGATTTGTCA+AGG | + | chr7.4:28830001-28830020 | MS.gene52223:intron | 25.0% |
| !! | TTTGAAATCATATACACGAA+GGG | - | chr7.4:28831104-28831123 | None:intergenic | 25.0% |
| !! | TTTTGTTCTTTTTCCATTGA+AGG | + | chr7.4:28832611-28832630 | MS.gene52223:intron | 25.0% |
| !!! | AATCCTTATTTTTCATTCGT+TGG | + | chr7.4:28831236-28831255 | MS.gene52223:intron | 25.0% |
| !!! | CATTGTTTTTTCCTTATTTG+TGG | + | chr7.4:28831691-28831710 | MS.gene52223:intron | 25.0% |
| !!! | TATGTTGTTCTAGGTATTTT+GGG | + | chr7.4:28832031-28832050 | MS.gene52223:intron | 25.0% |
| !!! | TGTGTTTTAAATATTTGGCA+GGG | + | chr7.4:28830788-28830807 | MS.gene52223:intron | 25.0% |
| !!! | TTATGTTGTTCTAGGTATTT+TGG | + | chr7.4:28832030-28832049 | MS.gene52223:intron | 25.0% |
| !!! | TTGTGTTTTAAATATTTGGC+AGG | + | chr7.4:28830787-28830806 | MS.gene52223:intron | 25.0% |
| !!! | TTTTGAAATCATATACACGA+AGG | - | chr7.4:28831105-28831124 | None:intergenic | 25.0% |
| AAAAATTGCACCTCATTAGT+TGG | - | chr7.4:28830208-28830227 | None:intergenic | 30.0% | |
| AAACTCATCCAAGAATTCTA+GGG | - | chr7.4:28833255-28833274 | None:intergenic | 30.0% | |
| AAATTAAATCCCTTGGTTAC+AGG | - | chr7.4:28832383-28832402 | None:intergenic | 30.0% | |
| AACAATAAGAACATACGAAG+AGG | - | chr7.4:28830709-28830728 | None:intergenic | 30.0% | |
| AACCATGATTCCATTTAAGT+TGG | - | chr7.4:28830573-28830592 | None:intergenic | 30.0% | |
| AACTTAAAACAAAGAAAGGG+AGG | - | chr7.4:28833361-28833380 | None:intergenic | 30.0% | |
| AAGATAAGAATGTCACGTTA+TGG | + | chr7.4:28829311-28829330 | MS.gene52223:CDS | 30.0% | |
| AATGCTAAATTCAGTGATGA+TGG | + | chr7.4:28829130-28829149 | MS.gene52223:intron | 30.0% | |
| AATTAAATCCCTTGGTTACA+GGG | - | chr7.4:28832382-28832401 | None:intergenic | 30.0% | |
| ACCTATAGTAGAAAAGATTG+GGG | + | chr7.4:28829574-28829593 | MS.gene52223:intron | 30.0% | |
| ACTTAAAACAAAGAAAGGGA+GGG | - | chr7.4:28833360-28833379 | None:intergenic | 30.0% | |
| ATGAATCAGAAAACATGCTA+TGG | + | chr7.4:28832529-28832548 | MS.gene52223:intron | 30.0% | |
| ATTCTCAGAAGAATATGACA+AGG | + | chr7.4:28829365-28829384 | MS.gene52223:CDS | 30.0% | |
| CACCTATAGTAGAAAAGATT+GGG | + | chr7.4:28829573-28829592 | MS.gene52223:intron | 30.0% | |
| CATCCAACGAATGAAAAATA+AGG | - | chr7.4:28831242-28831261 | None:intergenic | 30.0% | |
| CCTTCTTAGATTTAAAAGAG+AGG | - | chr7.4:28831473-28831492 | None:intergenic | 30.0% | |
| CTGAACATATCACATAGAAA+AGG | - | chr7.4:28830885-28830904 | None:intergenic | 30.0% | |
| CTTGAAGATAAAAAACCATC+AGG | + | chr7.4:28832859-28832878 | MS.gene52223:CDS | 30.0% | |
| CTTTACGAAACAAGAAAAAG+AGG | + | chr7.4:28833446-28833465 | MS.gene52223:CDS | 30.0% | |
| GAAAAATCTTGATCCTTCAA+TGG | - | chr7.4:28832627-28832646 | None:intergenic | 30.0% | |
| GACAGTTAAAACATAAGTCA+TGG | - | chr7.4:28830121-28830140 | None:intergenic | 30.0% | |
| GATTTGTATTTGCAGTTGTT+AGG | + | chr7.4:28833307-28833326 | MS.gene52223:intron | 30.0% | |
| GCAAACATTTACTTCGTATA+AGG | + | chr7.4:28831990-28832009 | MS.gene52223:intron | 30.0% | |
| GGCATAACTAAAACATGTTA+AGG | - | chr7.4:28831273-28831292 | None:intergenic | 30.0% | |
| TAAAGTGATCTTGCGAAAAT+TGG | - | chr7.4:28830984-28831003 | None:intergenic | 30.0% | |
| TAAGTCTCCATAATTGTTGA+GGG | - | chr7.4:28830357-28830376 | None:intergenic | 30.0% | |
| TAGATTTGATTGCAATCACT+TGG | + | chr7.4:28832403-28832422 | MS.gene52223:intron | 30.0% | |
| TGAATCAGAAAACATGCTAT+GGG | + | chr7.4:28832530-28832549 | MS.gene52223:intron | 30.0% | |
| TTCCATCTAATAGTGTTGTA+AGG | - | chr7.4:28831354-28831373 | None:intergenic | 30.0% | |
| TTCTCAGAAGAATATGACAA+GGG | + | chr7.4:28829366-28829385 | MS.gene52223:CDS | 30.0% | |
| ! | ACCATGATTCCATTTAAGTT+GGG | - | chr7.4:28830572-28830591 | None:intergenic | 30.0% |
| ! | AGTAGTTCTACTCTTAATAG+TGG | + | chr7.4:28833193-28833212 | MS.gene52223:intron | 30.0% |
| ! | ATTGTGTGTAAACTTTTTGC+AGG | + | chr7.4:28832762-28832781 | MS.gene52223:intron | 30.0% |
| ! | CCTCTCTTTTAAATCTAAGA+AGG | + | chr7.4:28831470-28831489 | MS.gene52223:intron | 30.0% |
| ! | GAAGATATTTTGTGCTTGAT+TGG | + | chr7.4:28831713-28831732 | MS.gene52223:intron | 30.0% |
| ! | TCATATTCTTCTGAGAATGT+TGG | - | chr7.4:28829363-28829382 | None:intergenic | 30.0% |
| ! | TTTATCAGATTGATTCAGTG+CGG | + | chr7.4:28831800-28831819 | MS.gene52223:intron | 30.0% |
| ! | TTTCTAAAGGAGTTGTTTGT+CGG | + | chr7.4:28830242-28830261 | MS.gene52223:CDS | 30.0% |
| ! | TTTGATTGTTATTCGAAAGC+AGG | + | chr7.4:28830938-28830957 | MS.gene52223:intron | 30.0% |
| !! | AAAATACTGCTCAAGTTGAA+GGG | + | chr7.4:28829449-28829468 | MS.gene52223:intron | 30.0% |
| !!! | ATTCTGTTTTGAAATGCCAA+TGG | + | chr7.4:28833394-28833413 | MS.gene52223:intron | 30.0% |
| !!! | GAAGGGATAATTTTTAAGAC+CGG | + | chr7.4:28829466-28829485 | MS.gene52223:intron | 30.0% |
| !!! | TATTTTGGGATTACGTAGAA+AGG | + | chr7.4:28832045-28832064 | MS.gene52223:CDS | 30.0% |
| AAAACAGAAGCGACAAGATT+AGG | - | chr7.4:28829241-28829260 | None:intergenic | 35.0% | |
| AAAATTCCATGAACCGTTGT+AGG | + | chr7.4:28830456-28830475 | MS.gene52223:intron | 35.0% | |
| AAACATTCCAAAAACCTTCC+GGG | + | chr7.4:28829284-28829303 | MS.gene52223:CDS | 35.0% | |
| AAATATTTGGCAGGGAAAGA+GGG | + | chr7.4:28830796-28830815 | MS.gene52223:intron | 35.0% | |
| AAATGGAATCATGGTTCAAC+TGG | + | chr7.4:28830577-28830596 | MS.gene52223:CDS | 35.0% | |
| AAATTCCATGAACCGTTGTA+GGG | + | chr7.4:28830457-28830476 | MS.gene52223:intron | 35.0% | |
| AACATAAAACTGCACAGTCA+AGG | - | chr7.4:28831604-28831623 | None:intergenic | 35.0% | |
| AACGTGACATTCTTATCTTG+CGG | - | chr7.4:28829310-28829329 | None:intergenic | 35.0% | |
| AAGTCTCCATAATTGTTGAG+GGG | - | chr7.4:28830356-28830375 | None:intergenic | 35.0% | |
| ACATAAAACTGCACAGTCAA+GGG | - | chr7.4:28831603-28831622 | None:intergenic | 35.0% | |
| ACCCAACTTAAATGGAATCA+TGG | + | chr7.4:28830568-28830587 | MS.gene52223:CDS | 35.0% | |
| ACCTAAATAACAGCATACCA+AGG | - | chr7.4:28830425-28830444 | None:intergenic | 35.0% | |
| ACTATTAGATGGAACCCAAA+AGG | + | chr7.4:28831360-28831379 | MS.gene52223:CDS | 35.0% | |
| ACTTCAGCAATAAGTTTGCA+TGG | + | chr7.4:28833148-28833167 | MS.gene52223:intron | 35.0% | |
| AGGGAGAAAAAGAAAGATCA+TGG | - | chr7.4:28831453-28831472 | None:intergenic | 35.0% | |
| AGTAAGAAGAGTAAGATCAG+AGG | + | chr7.4:28829649-28829668 | MS.gene52223:intron | 35.0% | |
| AGTATCTTCCCTAGAATTCT+TGG | + | chr7.4:28833244-28833263 | MS.gene52223:intron | 35.0% | |
| AGTGTACAGTTATTTGCTTG+TGG | + | chr7.4:28830490-28830509 | MS.gene52223:CDS | 35.0% | |
| ATTCAATGACATCTGCGAAA+AGG | - | chr7.4:28832744-28832763 | None:intergenic | 35.0% | |
| CAAACATTCCAAAAACCTTC+CGG | + | chr7.4:28829283-28829302 | MS.gene52223:CDS | 35.0% | |
| CAAACTCATCCAAGAATTCT+AGG | - | chr7.4:28833256-28833275 | None:intergenic | 35.0% | |
| CTAAGTCTCCATAATTGTTG+AGG | - | chr7.4:28830358-28830377 | None:intergenic | 35.0% | |
| CTATTAGATGGAACCCAAAA+GGG | + | chr7.4:28831361-28831380 | MS.gene52223:CDS | 35.0% | |
| GAATTGGTACTATTGTTCCT+TGG | + | chr7.4:28830405-28830424 | MS.gene52223:intron | 35.0% | |
| GATGTTTGACAAGTTATACC+AGG | + | chr7.4:28832675-28832694 | MS.gene52223:CDS | 35.0% | |
| GCACCTATAGTAGAAAAGAT+TGG | + | chr7.4:28829572-28829591 | MS.gene52223:intron | 35.0% | |
| GGGAGAAAAAGAAAGATCAT+GGG | - | chr7.4:28831452-28831471 | None:intergenic | 35.0% | |
| GTAACACTACTAAAGAGACT+AGG | + | chr7.4:28829203-28829222 | MS.gene52223:intron | 35.0% | |
| GTAAGAAGAGTAAGATCAGA+GGG | + | chr7.4:28829650-28829669 | MS.gene52223:intron | 35.0% | |
| GTCCTTACAACACTATTAGA+TGG | + | chr7.4:28831349-28831368 | MS.gene52223:CDS | 35.0% | |
| GTGATAAGACTAGACATGAT+AGG | + | chr7.4:28829513-28829532 | MS.gene52223:intron | 35.0% | |
| TAAATATTTGGCAGGGAAAG+AGG | + | chr7.4:28830795-28830814 | MS.gene52223:intron | 35.0% | |
| TAGAAAAGATTGGGGAAAAC+AGG | + | chr7.4:28829582-28829601 | MS.gene52223:intron | 35.0% | |
| TATACTACCTGACAACAGAT+GGG | + | chr7.4:28830665-28830684 | MS.gene52223:CDS | 35.0% | |
| TATCGCTGGATAATGTTTGT+TGG | + | chr7.4:28832349-28832368 | MS.gene52223:intron | 35.0% | |
| TCAGAACTGAATTGAATTGC+CGG | - | chr7.4:28830163-28830182 | None:intergenic | 35.0% | |
| TCGAAGATTTGTCAAGGAAA+CGG | + | chr7.4:28830007-28830026 | MS.gene52223:intron | 35.0% | |
| TGACCAAACAAACAAGGAAT+TGG | + | chr7.4:28830389-28830408 | MS.gene52223:intron | 35.0% | |
| TGTCAATGTATCTGTTGTTC+AGG | + | chr7.4:28830137-28830156 | MS.gene52223:intron | 35.0% | |
| TTAGTGGGATAAAACTTGGT+TGG | + | chr7.4:28829828-28829847 | MS.gene52223:intron | 35.0% | |
| TTATACTACCTGACAACAGA+TGG | + | chr7.4:28830664-28830683 | MS.gene52223:CDS | 35.0% | |
| TTATGTTGAGCAAATATCGC+TGG | + | chr7.4:28832335-28832354 | MS.gene52223:intron | 35.0% | |
| TTATTCGAAAGCAGGACTTA+TGG | + | chr7.4:28830946-28830965 | MS.gene52223:intron | 35.0% | |
| TTCAACTGGACTTCTAATTG+TGG | + | chr7.4:28830591-28830610 | MS.gene52223:CDS | 35.0% | |
| ! | CTTTGAAAATAACAGTAGGC+TGG | + | chr7.4:28831043-28831062 | MS.gene52223:intron | 35.0% |
| ! | GACACTGGGAATTTTTCTAA+AGG | + | chr7.4:28830229-28830248 | MS.gene52223:CDS | 35.0% |
| ! | GTACCAATTCCTTGTTTGTT+TGG | - | chr7.4:28830395-28830414 | None:intergenic | 35.0% |
| ! | TAAACTTTTTGCAGGCTGAT+TGG | + | chr7.4:28832770-28832789 | MS.gene52223:intron | 35.0% |
| ! | TCCCCAATCTTTTCTACTAT+AGG | - | chr7.4:28829578-28829597 | None:intergenic | 35.0% |
| ! | TCCTTGGTATGCTGTTATTT+AGG | + | chr7.4:28830421-28830440 | MS.gene52223:intron | 35.0% |
| ! | TGAGGATACATTTCCCTTTT+GGG | - | chr7.4:28831377-28831396 | None:intergenic | 35.0% |
| ! | TGCTATGGGAGAATATTTTG+CGG | + | chr7.4:28832544-28832563 | MS.gene52223:intron | 35.0% |
| ! | TTATCAGATTGATTCAGTGC+GGG | + | chr7.4:28831801-28831820 | MS.gene52223:intron | 35.0% |
| ! | TTTTCGTGACCAAACAAACA+AGG | + | chr7.4:28830383-28830402 | MS.gene52223:intron | 35.0% |
| !! | CAAGGCTTCAAGTTGATAAT+GGG | + | chr7.4:28832156-28832175 | MS.gene52223:CDS | 35.0% |
| !! | GAAAATACTGCTCAAGTTGA+AGG | + | chr7.4:28829448-28829467 | MS.gene52223:intron | 35.0% |
| !! | GATATTTTCTGAAGATGGCT+TGG | + | chr7.4:28830915-28830934 | MS.gene52223:intron | 35.0% |
| !! | TAGAGTTTGCTGTTGTGTAT+GGG | + | chr7.4:28830854-28830873 | MS.gene52223:CDS | 35.0% |
| !! | TGACTGTGCAGTTTTATGTT+TGG | + | chr7.4:28831604-28831623 | MS.gene52223:intron | 35.0% |
| !! | TGATGATGGATCTTTGCTTA+TGG | + | chr7.4:28829144-28829163 | MS.gene52223:intron | 35.0% |
| !! | TTAGAGTTTGCTGTTGTGTA+TGG | + | chr7.4:28830853-28830872 | MS.gene52223:CDS | 35.0% |
| !!! | AATTTTTAAGACCGGAGATG+AGG | + | chr7.4:28829474-28829493 | MS.gene52223:intron | 35.0% |
| !!! | GTAGAAACTTGGGTTAGTTT+TGG | - | chr7.4:28832981-28833000 | None:intergenic | 35.0% |
| AAAACAGGCTTAGGTGGTTT+GGG | + | chr7.4:28829597-28829616 | MS.gene52223:intron | 40.0% | |
| AAACAAAGAAAGGGAGGGAA+AGG | - | chr7.4:28833355-28833374 | None:intergenic | 40.0% | |
| AAATCTAAGAAGGACCCTTG+AGG | + | chr7.4:28831480-28831499 | MS.gene52223:intron | 40.0% | |
| AAGCATGGTAAAGAACCTGA+TGG | - | chr7.4:28832877-28832896 | None:intergenic | 40.0% | |
| AATATTTGGCAGGGAAAGAG+GGG | + | chr7.4:28830797-28830816 | MS.gene52223:intron | 40.0% | |
| AATCTAAGAAGGACCCTTGA+GGG | + | chr7.4:28831481-28831500 | MS.gene52223:intron | 40.0% | |
| AATGGTCTGTGTCAAGTGAA+TGG | + | chr7.4:28832093-28832112 | MS.gene52223:CDS | 40.0% | |
| AATGTATCTGTTGTTCAGGC+CGG | + | chr7.4:28830141-28830160 | MS.gene52223:intron | 40.0% | |
| AATTCCATGAACCGTTGTAG+GGG | + | chr7.4:28830458-28830477 | MS.gene52223:intron | 40.0% | |
| ACGTTATGGAAGATTCAGAC+TGG | + | chr7.4:28829325-28829344 | MS.gene52223:CDS | 40.0% | |
| AGAATATGACAAGGGCCAAT+TGG | + | chr7.4:28829374-28829393 | MS.gene52223:CDS | 40.0% | |
| AGGGAATATCTAGTCCAGTT+GGG | - | chr7.4:28831140-28831159 | None:intergenic | 40.0% | |
| AGGTGAAATAGAAAGCTCAG+CGG | - | chr7.4:28830290-28830309 | None:intergenic | 40.0% | |
| ATACTACCTGACAACAGATG+GGG | + | chr7.4:28830666-28830685 | MS.gene52223:CDS | 40.0% | |
| ATTGGCTAAACTAGGACTAC+TGG | + | chr7.4:28831731-28831750 | MS.gene52223:intron | 40.0% | |
| CCACTTAGTGGGATAAAACT+TGG | + | chr7.4:28829824-28829843 | MS.gene52223:intron | 40.0% | |
| CCATTATCAACTTGAAGCCT+TGG | - | chr7.4:28832158-28832177 | None:intergenic | 40.0% | |
| CTTGACCTGCAAAAAGTTCA+CGG | - | chr7.4:28832956-28832975 | None:intergenic | 40.0% | |
| GAAAAAGAGGGAGAAACAGA+AGG | + | chr7.4:28833459-28833478 | MS.gene52223:CDS | 40.0% | |
| GCAAATAACTGTACACTAGC+AGG | - | chr7.4:28830487-28830506 | None:intergenic | 40.0% | |
| GGAGAAACAGAAGGAGAAAA+AGG | + | chr7.4:28833468-28833487 | MS.gene52223:CDS | 40.0% | |
| GTGATGTCACCAAACTTACT+TGG | - | chr7.4:28832808-28832827 | None:intergenic | 40.0% | |
| GTTCGACAACCCAACTTAAA+TGG | + | chr7.4:28830560-28830579 | MS.gene52223:CDS | 40.0% | |
| TCATGTAGCTGCATTTGTTC+CGG | + | chr7.4:28830315-28830334 | MS.gene52223:CDS | 40.0% | |
| TGTATCCTCAGCTGATGATT+TGG | + | chr7.4:28831387-28831406 | MS.gene52223:intron | 40.0% | |
| TTTGTGCCCCTCAACAATTA+TGG | + | chr7.4:28830347-28830366 | MS.gene52223:intron | 40.0% | |
| ! | AAGAGGCTTTGGTAGAAACT+TGG | - | chr7.4:28832992-28833011 | None:intergenic | 40.0% |
| ! | AGAGGCTTTGGTAGAAACTT+GGG | - | chr7.4:28832991-28833010 | None:intergenic | 40.0% |
| ! | AGTTTGAGATACTACTGACC+TGG | - | chr7.4:28832696-28832715 | None:intergenic | 40.0% |
| ! | ATGGGAGAATATTTTGCGGA+TGG | + | chr7.4:28832548-28832567 | MS.gene52223:intron | 40.0% |
| ! | CAACAAAATCAAAGTGCCCA+TGG | - | chr7.4:28832227-28832246 | None:intergenic | 40.0% |
| ! | CAAGGATTGGAACTTTGAAG+AGG | + | chr7.4:28831511-28831530 | MS.gene52223:intron | 40.0% |
| ! | CTGAGGATACATTTCCCTTT+TGG | - | chr7.4:28831378-28831397 | None:intergenic | 40.0% |
| ! | GAATACCGTGAACTTTTTGC+AGG | + | chr7.4:28832948-28832967 | MS.gene52223:intron | 40.0% |
| ! | GATGTTTTCTCAAACCAACC+AGG | + | chr7.4:28830074-28830093 | MS.gene52223:intron | 40.0% |
| ! | TAAAACTTGGTTGGTTGTCG+TGG | + | chr7.4:28829837-28829856 | MS.gene52223:intron | 40.0% |
| ! | TAAGTTGGGTTGTCGAACAT+CGG | - | chr7.4:28830558-28830577 | None:intergenic | 40.0% |
| ! | TCAAACAGAGTTGCTTTAGC+AGG | - | chr7.4:28831294-28831313 | None:intergenic | 40.0% |
| ! | TGATGGATCTTTGCTTATGG+TGG | + | chr7.4:28829147-28829166 | MS.gene52223:intron | 40.0% |
| ! | TGTGCTTGATTGGCTAAACT+AGG | + | chr7.4:28831723-28831742 | MS.gene52223:intron | 40.0% |
| !! | AGGTGCAATTTTTCGACACT+GGG | + | chr7.4:28830215-28830234 | MS.gene52223:CDS | 40.0% |
| !! | CCAAGGCTTCAAGTTGATAA+TGG | + | chr7.4:28832155-28832174 | MS.gene52223:CDS | 40.0% |
| !! | CCAAGTTTTATCCCACTAAG+TGG | - | chr7.4:28829827-28829846 | None:intergenic | 40.0% |
| !! | TAAGTCATGGTGAGAGTGTT+AGG | - | chr7.4:28830108-28830127 | None:intergenic | 40.0% |
| !! | TGTGCAGTTTTATGTTTGGC+TGG | + | chr7.4:28831608-28831627 | MS.gene52223:intron | 40.0% |
| !!! | GTTTTATGTTTGGCTGGCTT+TGG | + | chr7.4:28831614-28831633 | MS.gene52223:intron | 40.0% |
| AAGCCATAACGATACCCAAC+TGG | + | chr7.4:28831123-28831142 | MS.gene52223:intron | 45.0% | |
| AATGCAGCTACATGAGAAGC+AGG | - | chr7.4:28830310-28830329 | None:intergenic | 45.0% | |
| AGAAGAGTAAGATCAGAGGG+AGG | + | chr7.4:28829653-28829672 | MS.gene52223:intron | 45.0% | |
| AGATTGGGGAAAACAGGCTT+AGG | + | chr7.4:28829588-28829607 | MS.gene52223:intron | 45.0% | |
| ATTCCATGAACCGTTGTAGG+GGG | + | chr7.4:28830459-28830478 | MS.gene52223:intron | 45.0% | |
| CAACACAACATCCTCATCTC+CGG | - | chr7.4:28829488-28829507 | None:intergenic | 45.0% | |
| CAACATTAGACACAGAGCTG+AGG | + | chr7.4:28829547-28829566 | MS.gene52223:intron | 45.0% | |
| CAAGTGAATGGTCTCCAGAT+GGG | + | chr7.4:28832105-28832124 | MS.gene52223:CDS | 45.0% | |
| CAGGGAATATCTAGTCCAGT+TGG | - | chr7.4:28831141-28831160 | None:intergenic | 45.0% | |
| CCAGAGTCACCAAGTAAGTT+TGG | + | chr7.4:28832796-28832815 | MS.gene52223:CDS | 45.0% | |
| GAAAACAGGCTTAGGTGGTT+TGG | + | chr7.4:28829596-28829615 | MS.gene52223:intron | 45.0% | |
| GAAACAGCTTGCATCAACCA+AGG | + | chr7.4:28832067-28832086 | MS.gene52223:CDS | 45.0% | |
| GAATGCCAAATCATCAGCTG+AGG | - | chr7.4:28831395-28831414 | None:intergenic | 45.0% | |
| GACCATTGAGCGTCATGAAT+AGG | - | chr7.4:28830823-28830842 | None:intergenic | 45.0% | |
| GACGCTCAATGGTCAAATTC+AGG | + | chr7.4:28830829-28830848 | MS.gene52223:CDS | 45.0% | |
| GAGGATAGTCGTATCACTAG+AGG | + | chr7.4:28829672-28829691 | MS.gene52223:intron | 45.0% | |
| GGAGAACATACCATATCACC+AGG | - | chr7.4:28831647-28831666 | None:intergenic | 45.0% | |
| GTCATGAAATAGCACCCATC+TGG | - | chr7.4:28832122-28832141 | None:intergenic | 45.0% | |
| GTTTGCAAATAAGTTCCGCG+AGG | - | chr7.4:28829268-28829287 | None:intergenic | 45.0% | |
| TAAGACTGCAGCTGCTATTC+AGG | + | chr7.4:28833061-28833080 | MS.gene52223:CDS | 45.0% | |
| TCAAGTGAATGGTCTCCAGA+TGG | + | chr7.4:28832104-28832123 | MS.gene52223:CDS | 45.0% | |
| TGCATTTGTTCCGGAATCCA+AGG | + | chr7.4:28830324-28830343 | MS.gene52223:CDS | 45.0% | |
| TGCTTCCCAAAGTCAACCTT+TGG | + | chr7.4:28830516-28830535 | MS.gene52223:CDS | 45.0% | |
| TTGCATCAACCAAGGCTGAA+TGG | + | chr7.4:28832075-28832094 | MS.gene52223:CDS | 45.0% | |
| TTTATCCCACTAAGTGGCGT+CGG | - | chr7.4:28829821-28829840 | None:intergenic | 45.0% | |
| ! | AAAGTCAACCTTTGGCTCGA+CGG | + | chr7.4:28830524-28830543 | MS.gene52223:CDS | 45.0% |
| ! | AGGTTTTTGTGCAGTTGGGT+TGG | - | chr7.4:28833018-28833037 | None:intergenic | 45.0% |
| ! | AGTCCAGTTGGGTATCGTTA+TGG | - | chr7.4:28831129-28831148 | None:intergenic | 45.0% |
| ! | CAGCAGGTTTTTGTGCAGTT+GGG | - | chr7.4:28833022-28833041 | None:intergenic | 45.0% |
| ! | CCAAACTTACTTGGTGACTC+TGG | - | chr7.4:28832799-28832818 | None:intergenic | 45.0% |
| ! | CGTGAACTTTTTGCAGGTCA+AGG | + | chr7.4:28832954-28832973 | MS.gene52223:intron | 45.0% |
| ! | GCTTTTCTCCCTGTAACCAA+GGG | + | chr7.4:28832371-28832390 | MS.gene52223:intron | 45.0% |
| ! | GTTTGTCGGTTAAGAGTTCC+AGG | + | chr7.4:28830256-28830275 | MS.gene52223:CDS | 45.0% |
| ! | TCGAGCCAAAGGTTGACTTT+GGG | - | chr7.4:28830524-28830543 | None:intergenic | 45.0% |
| ! | TGGTAACTTGCCTGGTGATA+TGG | + | chr7.4:28831634-28831653 | MS.gene52223:CDS | 45.0% |
| !! | GAGGTGCAATTTTTCGACAC+TGG | + | chr7.4:28830214-28830233 | MS.gene52223:CDS | 45.0% |
| !! | TGGTGAGAGTGTTAGGACTT+CGG | - | chr7.4:28830101-28830120 | None:intergenic | 45.0% |
| AAAAAGCTCCGTCGAGCCAA+AGG | - | chr7.4:28830535-28830554 | None:intergenic | 50.0% | |
| AACTTGAAGCCTTGGAGCTG+TGG | - | chr7.4:28832150-28832169 | None:intergenic | 50.0% | |
| ACAACAGATGGGGTGCATGA+AGG | + | chr7.4:28830676-28830695 | MS.gene52223:CDS | 50.0% | |
| AGAAGGACCCTTGAGGGTTA+TGG | + | chr7.4:28831487-28831506 | MS.gene52223:intron | 50.0% | |
| AGTCGTATCACTAGAGGCTG+AGG | + | chr7.4:28829678-28829697 | MS.gene52223:intron | 50.0% | |
| ATCCTTGCCCATAACCCTCA+AGG | - | chr7.4:28831498-28831517 | None:intergenic | 50.0% | |
| ATGTCGCGTGCCAACTAATG+AGG | + | chr7.4:28830195-28830214 | MS.gene52223:CDS | 50.0% | |
| CGGAGATGAGGATGTTGTGT+TGG | + | chr7.4:28829486-28829505 | MS.gene52223:intron | 50.0% | |
| GAAGGACCCTTGAGGGTTAT+GGG | + | chr7.4:28831488-28831507 | MS.gene52223:intron | 50.0% | |
| GACATTCTTATCTTGCGGCC+CGG | - | chr7.4:28829305-28829324 | None:intergenic | 50.0% | |
| GCAGTTGTTAGGAGAGAGCT+CGG | + | chr7.4:28833318-28833337 | MS.gene52223:intron | 50.0% | |
| GGCCTATTCATGACGCTCAA+TGG | + | chr7.4:28830818-28830837 | MS.gene52223:CDS | 50.0% | |
| TCCTTGCCCATAACCCTCAA+GGG | - | chr7.4:28831497-28831516 | None:intergenic | 50.0% | |
| TGACACAGACCATTCAGCCT+TGG | - | chr7.4:28832087-28832106 | None:intergenic | 50.0% | |
| TGAGGGTTATGGGCAAGGAT+TGG | + | chr7.4:28831498-28831517 | MS.gene52223:intron | 50.0% | |
| TGATATTCGGCTGACCGTTC+TGG | - | chr7.4:28829087-28829106 | None:intergenic | 50.0% | |
| TTGGGGAAAACAGGCTTAGG+TGG | + | chr7.4:28829591-28829610 | MS.gene52223:intron | 50.0% | |
| ! | CAAGAAGTGCAGACCTCTAC+TGG | + | chr7.4:28831314-28831333 | MS.gene52223:CDS | 50.0% |
| ! | GCAGCAGGTTTTTGTGCAGT+TGG | - | chr7.4:28833023-28833042 | None:intergenic | 50.0% |
| ! | GGCTTTTCTCCCTGTAACCA+AGG | + | chr7.4:28832370-28832389 | MS.gene52223:intron | 50.0% |
| ! | GTCGAGCCAAAGGTTGACTT+TGG | - | chr7.4:28830525-28830544 | None:intergenic | 50.0% |
| ! | TTGTTGAGGGGCACAAACCT+TGG | - | chr7.4:28830344-28830363 | None:intergenic | 50.0% |
| ACCCTTGAGGGTTATGGGCA+AGG | + | chr7.4:28831493-28831512 | MS.gene52223:intron | 55.0% | |
| ATGTAGCCGACGCCACTTAG+TGG | + | chr7.4:28829812-28829831 | MS.gene52223:intron | 55.0% | |
| CATGCACCCCATCTGTTGTC+AGG | - | chr7.4:28830675-28830694 | None:intergenic | 55.0% | |
| CCAGTTCCAAGCTCCAGTAG+AGG | - | chr7.4:28831330-28831349 | None:intergenic | 55.0% | |
| CCTCTACTGGAGCTTGGAAC+TGG | + | chr7.4:28831327-28831346 | MS.gene52223:CDS | 55.0% | |
| CTAGCAGGAACCCCCTACAA+CGG | - | chr7.4:28830472-28830491 | None:intergenic | 55.0% | |
| GAACCCCCTACAACGGTTCA+TGG | - | chr7.4:28830465-28830484 | None:intergenic | 55.0% | |
| GAGTGTTAGGACTTCGGACC+TGG | - | chr7.4:28830095-28830114 | None:intergenic | 55.0% | |
| GGGGCACAAACCTTGGATTC+CGG | - | chr7.4:28830337-28830356 | None:intergenic | 55.0% | |
| GTTAGGACTTCGGACCTGGT+TGG | - | chr7.4:28830091-28830110 | None:intergenic | 55.0% | |
| TGACAGCAACCACAGCTCCA+AGG | + | chr7.4:28832138-28832157 | MS.gene52223:CDS | 55.0% | |
| TGCAGACCTCTACTGGAGCT+TGG | + | chr7.4:28831321-28831340 | MS.gene52223:CDS | 55.0% | |
| TGCAGCTGCTATTCAGGCAG+AGG | + | chr7.4:28833067-28833086 | MS.gene52223:CDS | 55.0% | |
| TGTAGCCGACGCCACTTAGT+GGG | + | chr7.4:28829813-28829832 | MS.gene52223:intron | 55.0% | |
| TTCTTATCTTGCGGCCCGGA+AGG | - | chr7.4:28829301-28829320 | None:intergenic | 55.0% | |
| ! | GCTTCTGTTTTGTCGCCTCG+CGG | + | chr7.4:28829250-28829269 | MS.gene52223:CDS | 55.0% |
| !! | ACTAAGTGGCGTCGGCTACA+TGG | - | chr7.4:28829813-28829832 | None:intergenic | 55.0% |
| !! | GCTGACCGTTCTGGAATGGA+GGG | - | chr7.4:28829078-28829097 | None:intergenic | 55.0% |
| !! | GCTGGCTTTGGTAACTTGCC+TGG | + | chr7.4:28831626-28831645 | MS.gene52223:CDS | 55.0% |
| !! | TGCAGTTGGGTTGGCAGAAG+AGG | - | chr7.4:28833009-28833028 | None:intergenic | 55.0% |
| !! | TGGGTTGGCAGAAGAGGCTT+TGG | - | chr7.4:28833003-28833022 | None:intergenic | 55.0% |
| !! | TTCGGCTGACCGTTCTGGAA+TGG | - | chr7.4:28829082-28829101 | None:intergenic | 55.0% |
| ACCGGCCCTCCATTCCAGAA+CGG | + | chr7.4:28829070-28829089 | MS.gene52223:CDS | 60.0% | |
| AGCTCAGCGGAAGCAACTCC+TGG | - | chr7.4:28830277-28830296 | None:intergenic | 60.0% | |
| ! | CTTGCGGCCCGGAAGGTTTT+TGG | - | chr7.4:28829294-28829313 | None:intergenic | 60.0% |
| !! | ACCGTTCTGGAATGGAGGGC+CGG | - | chr7.4:28829074-28829093 | None:intergenic | 60.0% |
| !! | GGCTGACCGTTCTGGAATGG+AGG | - | chr7.4:28829079-28829098 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 28829057 | 28833513 | 28829057 | ID=MS.gene52223 |
| chr7.4 | mRNA | 28829057 | 28833513 | 28829057 | ID=MS.gene52223.t1;Parent=MS.gene52223 |
| chr7.4 | exon | 28829057 | 28829091 | 28829057 | ID=MS.gene52223.t1.exon1;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28829057 | 28829091 | 28829057 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28829225 | 28829395 | 28829225 | ID=MS.gene52223.t1.exon2;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28829225 | 28829395 | 28829225 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28830159 | 28830345 | 28830159 | ID=MS.gene52223.t1.exon3;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28830159 | 28830345 | 28830159 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28830478 | 28830712 | 28830478 | ID=MS.gene52223.t1.exon4;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28830478 | 28830712 | 28830478 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28830809 | 28830877 | 28830809 | ID=MS.gene52223.t1.exon5;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28830809 | 28830877 | 28830809 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28831286 | 28831387 | 28831286 | ID=MS.gene52223.t1.exon6;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28831286 | 28831387 | 28831286 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28831615 | 28831655 | 28831615 | ID=MS.gene52223.t1.exon7;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28831615 | 28831655 | 28831615 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28832044 | 28832177 | 28832044 | ID=MS.gene52223.t1.exon8;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28832044 | 28832177 | 28832044 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28832633 | 28832696 | 28832633 | ID=MS.gene52223.t1.exon9;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28832633 | 28832696 | 28832633 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28832784 | 28832880 | 28832784 | ID=MS.gene52223.t1.exon10;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28832784 | 28832880 | 28832784 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28832970 | 28833088 | 28832970 | ID=MS.gene52223.t1.exon11;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28832970 | 28833088 | 28832970 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28833322 | 28833344 | 28833322 | ID=MS.gene52223.t1.exon12;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28833322 | 28833344 | 28833322 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| chr7.4 | exon | 28833429 | 28833513 | 28833429 | ID=MS.gene52223.t1.exon13;Parent=MS.gene52223.t1 |
| chr7.4 | CDS | 28833429 | 28833513 | 28833429 | ID=cds.MS.gene52223.t1;Parent=MS.gene52223.t1 |
| Gene Sequence |
| Protein sequence |
