Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39588.t1 | XP_003608061.1 | 98.5 | 469 | 7 | 0 | 3 | 471 | 9 | 477 | 1.80E-275 | 958 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39588.t1 | O74965 | 35.9 | 437 | 254 | 7 | 38 | 467 | 39 | 456 | 8.6e-77 | 289.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39588.t1 | G7JNL0 | 98.5 | 469 | 7 | 0 | 3 | 471 | 9 | 477 | 1.3e-275 | 958.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40016 | MS.gene39588 | PPI |
| MS.gene01984 | MS.gene39588 | PPI |
| MS.gene32083 | MS.gene39588 | PPI |
| MS.gene39588 | MS.gene58159 | PPI |
| MS.gene023135 | MS.gene39588 | PPI |
| MS.gene35140 | MS.gene39588 | PPI |
| MS.gene82426 | MS.gene39588 | PPI |
| MS.gene028153 | MS.gene39588 | PPI |
| MS.gene037362 | MS.gene39588 | PPI |
| MS.gene004699 | MS.gene39588 | PPI |
| MS.gene39588 | MS.gene70303 | PPI |
| MS.gene36472 | MS.gene39588 | PPI |
| MS.gene39588 | MS.gene003175 | PPI |
| MS.gene048301 | MS.gene39588 | PPI |
| MS.gene72768 | MS.gene39588 | PPI |
| MS.gene030707 | MS.gene39588 | PPI |
| MS.gene036254 | MS.gene39588 | PPI |
| MS.gene028318 | MS.gene39588 | PPI |
| MS.gene57305 | MS.gene39588 | PPI |
| MS.gene02854 | MS.gene39588 | PPI |
| MS.gene030823 | MS.gene39588 | PPI |
| MS.gene28161 | MS.gene39588 | PPI |
| MS.gene029211 | MS.gene39588 | PPI |
| MS.gene39588 | MS.gene83444 | PPI |
| MS.gene93131 | MS.gene39588 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39588.t1 | MTR_4g087280 | 98.619 | 507 | 7 | 0 | 3 | 509 | 9 | 515 | 0.0 | 1043 |
| MS.gene39588.t1 | MTR_4g087280 | 98.312 | 474 | 8 | 0 | 3 | 476 | 9 | 482 | 0.0 | 981 |
| MS.gene39588.t1 | MTR_5g091610 | 69.892 | 93 | 16 | 2 | 332 | 424 | 126 | 206 | 1.19e-35 | 134 |
| MS.gene39588.t1 | MTR_3g105430 | 24.000 | 400 | 265 | 14 | 45 | 414 | 224 | 614 | 1.04e-21 | 99.4 |
| MS.gene39588.t1 | MTR_2g088350 | 97.436 | 39 | 1 | 0 | 397 | 435 | 1 | 39 | 7.18e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39588.t1 | AT1G73180 | 67.828 | 488 | 153 | 1 | 3 | 490 | 6 | 489 | 0.0 | 723 |
| MS.gene39588.t1 | AT1G73180 | 67.932 | 474 | 148 | 1 | 3 | 476 | 6 | 475 | 0.0 | 706 |
| MS.gene39588.t1 | AT5G27640 | 23.618 | 398 | 266 | 13 | 45 | 412 | 221 | 610 | 1.41e-22 | 102 |
| MS.gene39588.t1 | AT5G27640 | 23.618 | 398 | 266 | 13 | 45 | 412 | 221 | 610 | 1.41e-22 | 102 |
| MS.gene39588.t1 | AT5G27640 | 23.618 | 398 | 266 | 13 | 45 | 412 | 247 | 636 | 1.71e-22 | 102 |
| MS.gene39588.t1 | AT5G25780 | 23.250 | 400 | 268 | 14 | 45 | 414 | 222 | 612 | 2.38e-21 | 98.2 |
Find 102 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGGATACATTTCCCTTT+TGG | 0.184033 | 4.2:-24054427 | None:intergenic |
| GTTCTACAACCCAACTTAAA+TGG | 0.213890 | 4.2:+24053543 | MS.gene39588:CDS |
| CCAGAGTCACCAAGTAAATT+TGG | 0.263110 | 4.2:+24055835 | MS.gene39588:CDS |
| TGACATTCGGTTGACCGTTC+TGG | 0.288486 | 4.2:-24052520 | None:intergenic |
| TAAGACTGCAGCTGCTATTC+AGG | 0.307860 | 4.2:+24056100 | MS.gene39588:CDS |
| GGAGCACAGACCTTGGATTC+TGG | 0.314496 | 4.2:-24053315 | None:intergenic |
| CGGTAACTTGCCTGGTGATA+TGG | 0.317446 | 4.2:+24054679 | MS.gene39588:CDS |
| ATGGCATCTCTTGAGATATT+AGG | 0.332064 | 4.2:+24052373 | MS.gene39588:CDS |
| GTCGAGCCATAGGTTGAGTT+TGG | 0.333097 | 4.2:-24053505 | None:intergenic |
| GGAGAAACAGAAGGAGAAAA+AGG | 0.336853 | 4.2:+24056507 | MS.gene39588:CDS |
| GTAACACTGCTAAAGAAATT+AGG | 0.352354 | 4.2:+24052639 | MS.gene39588:CDS |
| AGCTCAGCGGAAGCAACTCC+TGG | 0.358438 | 4.2:-24053255 | None:intergenic |
| TTAGAGTTTGCTGTTGTGTA+TGG | 0.359900 | 4.2:+24053836 | MS.gene39588:CDS |
| AAAACAAATCAGAGTTACTA+TGG | 0.360928 | 4.2:+24053614 | MS.gene39588:CDS |
| AAGATAAGAATGTCACATTA+TGG | 0.367499 | 4.2:+24052747 | MS.gene39588:CDS |
| GTAGTGGCTTGGGTTGGTTT+AGG | 0.371129 | 4.2:-24056017 | None:intergenic |
| AACCATGATTCCATTTAAGT+TGG | 0.389606 | 4.2:-24053553 | None:intergenic |
| GGCCGGAAGAATGCTCACTA+TGG | 0.390559 | 4.2:+24052483 | MS.gene39588:CDS |
| GTTTGTCGGTTAAGAGTTCC+AGG | 0.393269 | 4.2:+24053237 | MS.gene39588:CDS |
| TGATGATGGATCTTTGCTTA+TGG | 0.395412 | 4.2:+24052580 | MS.gene39588:CDS |
| CAAGAAGTGCAGACCTCTAC+TGG | 0.395633 | 4.2:+24054366 | MS.gene39588:CDS |
| GATTTGTATTTGCAGTTGTT+AGG | 0.397376 | 4.2:+24056345 | MS.gene39588:intron |
| TCAGAGCTGAATTGAATTGC+CGG | 0.397889 | 4.2:-24053141 | None:intergenic |
| GATGCTCAATGGTCAAATTC+AGG | 0.398670 | 4.2:+24053812 | MS.gene39588:CDS |
| AAAACAGAAGCCACGAGATT+AGG | 0.400924 | 4.2:-24052674 | None:intergenic |
| GTCCATAGTGAGCATTCTTC+CGG | 0.404734 | 4.2:-24052485 | None:intergenic |
| CAAACTATTTGCAGGCTGAT+TGG | 0.414549 | 4.2:+24055809 | MS.gene39588:intron |
| AAATGGAATCATGGTTCAAC+TGG | 0.419644 | 4.2:+24053560 | MS.gene39588:CDS |
| ATATATAGTAATGACAGAAT+TGG | 0.420958 | 4.2:-24052612 | None:intergenic |
| ACCATGATGCAATCACAAAC+TGG | 0.422671 | 4.2:-24056542 | None:intergenic |
| GCTGGCTTCGGTAACTTGCC+TGG | 0.426870 | 4.2:+24054671 | MS.gene39588:CDS |
| GACCATTGAGCATCATGAAT+AGG | 0.429911 | 4.2:-24053803 | None:intergenic |
| CATGCACCCCATCTGTTGTC+AGG | 0.436554 | 4.2:-24053655 | None:intergenic |
| TGCAGTTGGGTTGGCAGAAG+AGG | 0.444560 | 4.2:-24056045 | None:intergenic |
| TCGAGCCATAGGTTGAGTTT+GGG | 0.446137 | 4.2:-24053504 | None:intergenic |
| AGAATATGACAAGGGCCAAT+TGG | 0.452350 | 4.2:+24052810 | MS.gene39588:CDS |
| TTCTTATCTTGCGGCCCGGA+AGG | 0.454027 | 4.2:-24052734 | None:intergenic |
| CCATTGTCAACTTGAAGCCT+TGG | 0.454121 | 4.2:-24055207 | None:intergenic |
| CCAAATTTACTTGGTGACTC+TGG | 0.455862 | 4.2:-24055835 | None:intergenic |
| TTTCTAAAGGAGTTGTTTGT+CGG | 0.459404 | 4.2:+24053223 | MS.gene39588:CDS |
| TCAAACAGAGTTGCTTTAGC+AGG | 0.461231 | 4.2:-24054343 | None:intergenic |
| TAATTATTTGGCAGGGAAAG+AGG | 0.463070 | 4.2:+24053778 | MS.gene39588:intron |
| ACTTTATCAAGTTTGACATT+CGG | 0.464197 | 4.2:-24052533 | None:intergenic |
| ACCATGATTCCATTTAAGTT+GGG | 0.465601 | 4.2:-24053552 | None:intergenic |
| GTCATGAAATAGCACCCATC+TGG | 0.472938 | 4.2:-24055171 | None:intergenic |
| CCTCTACTGGAGCTTGGAAC+TGG | 0.479313 | 4.2:+24054379 | MS.gene39588:CDS |
| TAGAGTTTGCTGTTGTGTAT+GGG | 0.481102 | 4.2:+24053837 | MS.gene39588:CDS |
| ACTATCCGATGGAACCCAAA+AGG | 0.484935 | 4.2:+24054412 | MS.gene39588:CDS |
| TTGCATCAACCAAGGCTGAA+TGG | 0.489961 | 4.2:+24055127 | MS.gene39588:CDS |
| TTCGGTTGACCGTTCTGGAA+TGG | 0.491146 | 4.2:-24052515 | None:intergenic |
| GTGATGTCACCAAATTTACT+TGG | 0.492747 | 4.2:-24055844 | None:intergenic |
| AATGCTAAATTCAGTGATGA+TGG | 0.493653 | 4.2:+24052566 | MS.gene39588:CDS |
| AATTATTTGGCAGGGAAAGA+GGG | 0.495759 | 4.2:+24053779 | MS.gene39588:intron |
| TGCTTCCCAAACTCAACCTA+TGG | 0.499274 | 4.2:+24053499 | MS.gene39588:CDS |
| ACCCAACTTAAATGGAATCA+TGG | 0.499990 | 4.2:+24053551 | MS.gene39588:CDS |
| TGCAGACCTCTACTGGAGCT+TGG | 0.507684 | 4.2:+24054373 | MS.gene39588:CDS |
| GACATTCTTATCTTGCGGCC+CGG | 0.510825 | 4.2:-24052738 | None:intergenic |
| AATGGTCTGTGTCAAGTGAA+TGG | 0.511021 | 4.2:+24055145 | MS.gene39588:CDS |
| CAAGGCTTCAAGTTGACAAT+GGG | 0.512251 | 4.2:+24055208 | MS.gene39588:CDS |
| TGACACAGACCATTCAGCCT+TGG | 0.524004 | 4.2:-24055136 | None:intergenic |
| TTATACTACCTGACAACAGA+TGG | 0.526764 | 4.2:+24053647 | MS.gene39588:CDS |
| TTCCATCGGATAGTGTTGTA+AGG | 0.527812 | 4.2:-24054403 | None:intergenic |
| GGCCTATTCATGATGCTCAA+TGG | 0.539103 | 4.2:+24053801 | MS.gene39588:CDS |
| GCAGTTGTTAGGAGAGAGCT+CGG | 0.541868 | 4.2:+24056356 | MS.gene39588:intron |
| GAAGAATGCTCACTATGGAC+TGG | 0.543679 | 4.2:+24052488 | MS.gene39588:CDS |
| TGCATTTGTTCCAGAATCCA+AGG | 0.545907 | 4.2:+24053305 | MS.gene39588:CDS |
| TGCGGTGGACGATATGCGGC+TGG | 0.549407 | 4.2:-24056074 | None:intergenic |
| CTATCCGATGGAACCCAAAA+GGG | 0.550340 | 4.2:+24054413 | MS.gene39588:CDS |
| GGTTGACCGTTCTGGAATGG+AGG | 0.551650 | 4.2:-24052512 | None:intergenic |
| AATGCAGCTACATGAGAAGC+AGG | 0.553166 | 4.2:-24053288 | None:intergenic |
| TAAGTTGGGTTGTAGAACAT+CGG | 0.563090 | 4.2:-24053538 | None:intergenic |
| CCAAGGCTTCAAGTTGACAA+TGG | 0.565390 | 4.2:+24055207 | MS.gene39588:CDS |
| ACAACAGATGGGGTGCATGA+AGG | 0.565598 | 4.2:+24053659 | MS.gene39588:CDS |
| TGCAGCTGCTATTCAGGCAG+AGG | 0.568714 | 4.2:+24056106 | MS.gene39588:CDS |
| TATACTACCTGACAACAGAT+GGG | 0.573112 | 4.2:+24053648 | MS.gene39588:CDS |
| GTTGACCGTTCTGGAATGGA+GGG | 0.578391 | 4.2:-24052511 | None:intergenic |
| TGATGGATCTTTGCTTATGG+TGG | 0.578520 | 4.2:+24052583 | MS.gene39588:CDS |
| GTCCTTACAACACTATCCGA+TGG | 0.588625 | 4.2:+24054401 | MS.gene39588:CDS |
| GCTGCAGTCTTAGCATGCGG+TGG | 0.596595 | 4.2:-24056089 | None:intergenic |
| CAAGTGAATGGTCTCCAGAT+GGG | 0.601629 | 4.2:+24055157 | MS.gene39588:CDS |
| ATTATTTGGCAGGGAAAGAG+GGG | 0.604036 | 4.2:+24053780 | MS.gene39588:intron |
| ATGCCGTGTGCCAACTAATG+AGG | 0.604069 | 4.2:+24053176 | MS.gene39588:CDS |
| AGCATGCGGTGGACGATATG+CGG | 0.604885 | 4.2:-24056078 | None:intergenic |
| TCAAGTGAATGGTCTCCAGA+TGG | 0.615111 | 4.2:+24055156 | MS.gene39588:CDS |
| CCAGTTCCAAGCTCCAGTAG+AGG | 0.620222 | 4.2:-24054379 | None:intergenic |
| ATTAGTTGGCACACGGCATG+CGG | 0.625309 | 4.2:-24053172 | None:intergenic |
| AAACTCAACCTATGGCTCGA+CGG | 0.625537 | 4.2:+24053507 | MS.gene39588:CDS |
| TTCAACTGGACTTCTAATTG+TGG | 0.628741 | 4.2:+24053574 | MS.gene39588:CDS |
| GATGTTTGACAAGTTATACC+AGG | 0.635363 | 4.2:+24055714 | MS.gene39588:CDS |
| ACATTATGGAAGATTGAGAC+TGG | 0.641864 | 4.2:+24052761 | MS.gene39588:CDS |
| TGACAGCAACAACAGCTCCA+AGG | 0.647896 | 4.2:+24055190 | MS.gene39588:CDS |
| GGAGAACATACCATATCACC+AGG | 0.651350 | 4.2:-24054689 | None:intergenic |
| GCAGCTGCAGTCTTAGCATG+CGG | 0.651643 | 4.2:-24056092 | None:intergenic |
| AATGTGACATTCTTATCTTG+CGG | 0.653542 | 4.2:-24052743 | None:intergenic |
| GCACCTCATTAGTTGGCACA+CGG | 0.654957 | 4.2:-24053179 | None:intergenic |
| GAAACAGCTTGCATCAACCA+AGG | 0.668592 | 4.2:+24055119 | MS.gene39588:CDS |
| TTCTCAGAAGAATATGACAA+GGG | 0.672557 | 4.2:+24052802 | MS.gene39588:CDS |
| ATTCTCAGAAGAATATGACA+AGG | 0.693333 | 4.2:+24052801 | MS.gene39588:CDS |
| ACTGGCCCTCCATTCCAGAA+CGG | 0.694693 | 4.2:+24052506 | MS.gene39588:CDS |
| ATACTACCTGACAACAGATG+GGG | 0.704485 | 4.2:+24053649 | MS.gene39588:CDS |
| AGGTGATATAGAAAGCTCAG+CGG | 0.737636 | 4.2:-24053268 | None:intergenic |
| GTTTGCAAATAAGTTCCGCG+AGG | 0.750889 | 4.2:-24052701 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAAACATAGAT+AGG | - | chr4.2:24052427-24052446 | None:intergenic | 10.0% |
| !!! | ATCATAATTTTATTTTCTAT+CGG | - | chr4.2:24054814-24054833 | None:intergenic | 10.0% |
| !!! | GATTTTTTGTTTTAATTATT+TGG | + | chr4.2:24053766-24053785 | MS.gene39588:intron | 10.0% |
| !! | AACATAATAATTTAATCAGT+CGG | - | chr4.2:24054714-24054733 | None:intergenic | 15.0% |
| !! | CAACATTAAAAAAAAAAGTT+TGG | + | chr4.2:24054933-24054952 | MS.gene39588:intron | 15.0% |
| !! | TAATAAAATCTATTGATCTA+TGG | - | chr4.2:24055364-24055383 | None:intergenic | 15.0% |
| !! | TATTAATAAAAAACTATGCA+GGG | - | chr4.2:24054196-24054215 | None:intergenic | 15.0% |
| !!! | ATAAACAATTGAATATTTTC+AGG | - | chr4.2:24055271-24055290 | None:intergenic | 15.0% |
| !!! | ATAATTGAAGTTTTTATTTC+TGG | + | chr4.2:24054968-24054987 | MS.gene39588:intron | 15.0% |
| !!! | TAAACAATTGAATATTTTCA+GGG | - | chr4.2:24055270-24055289 | None:intergenic | 15.0% |
| !!! | TCATAATTTTATTTTCTATC+GGG | - | chr4.2:24054813-24054832 | None:intergenic | 15.0% |
| !! | AAATGGAAAGGAAAAAAAAA+AGG | - | chr4.2:24054286-24054305 | None:intergenic | 20.0% |
| !! | AAGAAACTTAAAACAAAGAA+AGG | - | chr4.2:24056403-24056422 | None:intergenic | 20.0% |
| !! | AATGTTGAAAATAACGTTTA+TGG | - | chr4.2:24054920-24054939 | None:intergenic | 20.0% |
| !! | AATTGTTTATCTTTATCCAT+GGG | + | chr4.2:24055281-24055300 | MS.gene39588:intron | 20.0% |
| !! | ACATAATAATTTAATCAGTC+GGG | - | chr4.2:24054713-24054732 | None:intergenic | 20.0% |
| !! | AGAAACTTAAAACAAAGAAA+GGG | - | chr4.2:24056402-24056421 | None:intergenic | 20.0% |
| !! | AGAAAGAAAAAAAAAACTCA+TGG | - | chr4.2:24054488-24054507 | None:intergenic | 20.0% |
| !! | AGGAAAAAAAAAAGGATTAA+AGG | - | chr4.2:24054278-24054297 | None:intergenic | 20.0% |
| !! | ATATATAGTAATGACAGAAT+TGG | - | chr4.2:24052615-24052634 | None:intergenic | 20.0% |
| !! | ATGAAATATTAGAATAAGCA+TGG | - | chr4.2:24055931-24055950 | None:intergenic | 20.0% |
| !! | CTATTAATAAAAAACTATGC+AGG | - | chr4.2:24054197-24054216 | None:intergenic | 20.0% |
| !! | GAAAGAAAAAAAAAACTCAT+GGG | - | chr4.2:24054487-24054506 | None:intergenic | 20.0% |
| !! | TATATGTGATATGTTCAATA+TGG | + | chr4.2:24053870-24053889 | MS.gene39588:intron | 20.0% |
| !! | TTGAACATATCACATATAAA+AGG | - | chr4.2:24053868-24053887 | None:intergenic | 20.0% |
| !!! | AAGATGACTTTATTGTTTTT+TGG | + | chr4.2:24054014-24054033 | MS.gene39588:intron | 20.0% |
| !!! | AATTTAAAATAGAAACAGTG+AGG | - | chr4.2:24056156-24056175 | None:intergenic | 20.0% |
| !!! | AGATGACTTTATTGTTTTTT+GGG | + | chr4.2:24054015-24054034 | MS.gene39588:intron | 20.0% |
| !!! | ATCAAGATTTTTCACTATAA+TGG | + | chr4.2:24055673-24055692 | MS.gene39588:CDS | 20.0% |
| !!! | ATTTAAAATAGAAACAGTGA+GGG | - | chr4.2:24056155-24056174 | None:intergenic | 20.0% |
| !!! | CATAATTTTATTTTCTATCG+GGG | - | chr4.2:24054812-24054831 | None:intergenic | 20.0% |
| !!! | TCAAGATTTTTCACTATAAT+GGG | + | chr4.2:24055674-24055693 | MS.gene39588:CDS | 20.0% |
| !!! | TGATATAAAGTATCTAAATC+AGG | + | chr4.2:24054589-24054608 | MS.gene39588:intron | 20.0% |
| !!! | TTAATTTGATGACATTTATG+AGG | + | chr4.2:24055539-24055558 | MS.gene39588:intron | 20.0% |
| !!! | TTTCTCTTTTAAATCTAAGA+AGG | + | chr4.2:24054512-24054531 | MS.gene39588:intron | 20.0% |
| !!! | TTTGGGACTTTATTTTTTTT+GGG | + | chr4.2:24054032-24054051 | MS.gene39588:intron | 20.0% |
| !!! | TTTGTTTTAATTATTTGGCA+GGG | + | chr4.2:24053771-24053790 | MS.gene39588:intron | 20.0% |
| !!! | TTTTGGGACTTTATTTTTTT+TGG | + | chr4.2:24054031-24054050 | MS.gene39588:intron | 20.0% |
| !!! | TTTTGTTTTAATTATTTGGC+AGG | + | chr4.2:24053770-24053789 | MS.gene39588:intron | 20.0% |
| ! | AAAACAAATCAGAGTTACTA+TGG | + | chr4.2:24053614-24053633 | MS.gene39588:CDS | 25.0% |
| ! | AAACTCATTCAAGAATTCTA+GGG | - | chr4.2:24056293-24056312 | None:intergenic | 25.0% |
| ! | AACAATTAGAACATACTAAG+AGG | - | chr4.2:24053692-24053711 | None:intergenic | 25.0% |
| ! | AAGATAAGAATGTCACATTA+TGG | + | chr4.2:24052747-24052766 | MS.gene39588:CDS | 25.0% |
| ! | AATGAAAAATGCTTTCTTAG+TGG | - | chr4.2:24055627-24055646 | None:intergenic | 25.0% |
| ! | ACTTTATCAAGTTTGACATT+CGG | - | chr4.2:24052536-24052555 | None:intergenic | 25.0% |
| ! | ATTCAACAATACATACCAAT+TGG | - | chr4.2:24052828-24052847 | None:intergenic | 25.0% |
| ! | CAATTGTTTATCTTTATCCA+TGG | + | chr4.2:24055280-24055299 | MS.gene39588:intron | 25.0% |
| ! | GAAAATAAACATCCAACAAA+TGG | - | chr4.2:24054303-24054322 | None:intergenic | 25.0% |
| ! | TAAAGTCATCTTGCAAAAAT+TGG | - | chr4.2:24054006-24054025 | None:intergenic | 25.0% |
| ! | TATATTTGATTGCAATCACT+TGG | + | chr4.2:24055442-24055461 | MS.gene39588:intron | 25.0% |
| ! | TCACTTGGTTATATATAACT+TGG | + | chr4.2:24055457-24055476 | MS.gene39588:intron | 25.0% |
| ! | TGGTATGTATTGTTGAATTA+TGG | + | chr4.2:24052830-24052849 | MS.gene39588:intron | 25.0% |
| ! | TTTAAAGAAGAACTGATGAT+TGG | + | chr4.2:24053716-24053735 | MS.gene39588:intron | 25.0% |
| ! | TTTACGAAACAAGAAAAAGA+GGG | + | chr4.2:24056486-24056505 | MS.gene39588:CDS | 25.0% |
| !! | ACTGCAAATACAAATCATTT+TGG | - | chr4.2:24056341-24056360 | None:intergenic | 25.0% |
| !! | GAATTGATGCTATTGTTATT+TGG | + | chr4.2:24053386-24053405 | MS.gene39588:intron | 25.0% |
| !! | TACGAAAATATAGCTCTATT+TGG | + | chr4.2:24052893-24052912 | MS.gene39588:intron | 25.0% |
| !! | TTTTGTTCTTTTTCCATTGA+AGG | + | chr4.2:24055650-24055669 | MS.gene39588:intron | 25.0% |
| !!! | ATTTTTCATTTTGCTGTTCT+AGG | + | chr4.2:24055074-24055093 | MS.gene39588:intron | 25.0% |
| !!! | GGCTTTTAAAATCATATACA+AGG | - | chr4.2:24054145-24054164 | None:intergenic | 25.0% |
| !!! | TTTCTTTGTTTTTTCCTTTC+TGG | + | chr4.2:24054733-24054752 | MS.gene39588:intron | 25.0% |
| !!! | TTTTTTTCCTTTCCATTTGT+TGG | + | chr4.2:24054288-24054307 | MS.gene39588:intron | 25.0% |
| AAAAATTGCACCTCATTAGT+TGG | - | chr4.2:24053189-24053208 | None:intergenic | 30.0% | |
| AAAATTCCATGAACCATTGT+AGG | + | chr4.2:24053439-24053458 | MS.gene39588:intron | 30.0% | |
| AAATTCCATGAACCATTGTA+GGG | + | chr4.2:24053440-24053459 | MS.gene39588:intron | 30.0% | |
| AACCATGATTCCATTTAAGT+TGG | - | chr4.2:24053556-24053575 | None:intergenic | 30.0% | |
| AACTTAAAACAAAGAAAGGG+AGG | - | chr4.2:24056399-24056418 | None:intergenic | 30.0% | |
| AATATCACAAGCAATTCTCA+TGG | + | chr4.2:24054891-24054910 | MS.gene39588:intron | 30.0% | |
| AATGCTAAATTCAGTGATGA+TGG | + | chr4.2:24052566-24052585 | MS.gene39588:CDS | 30.0% | |
| AATGTGACATTCTTATCTTG+CGG | - | chr4.2:24052746-24052765 | None:intergenic | 30.0% | |
| ACAAGCAAAAATTTGTACAC+TGG | - | chr4.2:24053474-24053493 | None:intergenic | 30.0% | |
| ACTTAAAACAAAGAAAGGGA+GGG | - | chr4.2:24056398-24056417 | None:intergenic | 30.0% | |
| ATAAAACTGCAAAACAGTCA+AGG | - | chr4.2:24054646-24054665 | None:intergenic | 30.0% | |
| ATAATTCAACATTCTCGTAG+TGG | - | chr4.2:24054862-24054881 | None:intergenic | 30.0% | |
| ATGAATCAGAAAACATGCTA+TGG | + | chr4.2:24055568-24055587 | MS.gene39588:intron | 30.0% | |
| ATTCTCAGAAGAATATGACA+AGG | + | chr4.2:24052801-24052820 | MS.gene39588:CDS | 30.0% | |
| ATTTCAGCAATAAGTTTGCA+TGG | + | chr4.2:24056186-24056205 | MS.gene39588:intron | 30.0% | |
| CAAACTCATTCAAGAATTCT+AGG | - | chr4.2:24056294-24056313 | None:intergenic | 30.0% | |
| CTTGAAGATAAAAAACCATC+AGG | + | chr4.2:24055898-24055917 | MS.gene39588:CDS | 30.0% | |
| CTTTACGAAACAAGAAAAAG+AGG | + | chr4.2:24056485-24056504 | MS.gene39588:CDS | 30.0% | |
| GAAAAATCTTGATCCTTCAA+TGG | - | chr4.2:24055666-24055685 | None:intergenic | 30.0% | |
| GACAGTTAAAACATAAGTCA+TGG | - | chr4.2:24053102-24053121 | None:intergenic | 30.0% | |
| GACCTAAAATAATCAACCAT+TGG | - | chr4.2:24056451-24056470 | None:intergenic | 30.0% | |
| GATATTTGCTTAAGATACCA+GGG | + | chr4.2:24053932-24053951 | MS.gene39588:intron | 30.0% | |
| GATTTGTATTTGCAGTTGTT+AGG | + | chr4.2:24056345-24056364 | MS.gene39588:intron | 30.0% | |
| GGCATAACTAAAACATGTTA+AGG | - | chr4.2:24054325-24054344 | None:intergenic | 30.0% | |
| GTAACACTGCTAAAGAAATT+AGG | + | chr4.2:24052639-24052658 | MS.gene39588:CDS | 30.0% | |
| TAAAACTGCAAAACAGTCAA+GGG | - | chr4.2:24054645-24054664 | None:intergenic | 30.0% | |
| TAAACATCCAACAAATGGAA+AGG | - | chr4.2:24054298-24054317 | None:intergenic | 30.0% | |
| TGAATCAGAAAACATGCTAT+GGG | + | chr4.2:24055569-24055588 | MS.gene39588:intron | 30.0% | |
| TGATATTTGCTTAAGATACC+AGG | + | chr4.2:24053931-24053950 | MS.gene39588:intron | 30.0% | |
| TTCTCAGAAGAATATGACAA+GGG | + | chr4.2:24052802-24052821 | MS.gene39588:CDS | 30.0% | |
| TTTGAAAATAACAGTAGAGC+TGG | + | chr4.2:24054083-24054102 | MS.gene39588:intron | 30.0% | |
| TTTGATTACTATTCGAAAGC+AGG | + | chr4.2:24053960-24053979 | MS.gene39588:intron | 30.0% | |
| ! | ACAAAATAAAAGCAGCCTTT+TGG | - | chr4.2:24055340-24055359 | None:intergenic | 30.0% |
| ! | ACCATGATTCCATTTAAGTT+GGG | - | chr4.2:24053555-24053574 | None:intergenic | 30.0% |
| ! | AGTAGTTCTACTCTTAATAG+TGG | + | chr4.2:24056231-24056250 | MS.gene39588:intron | 30.0% |
| ! | AGTGTACAAATTTTTGCTTG+TGG | + | chr4.2:24053473-24053492 | MS.gene39588:CDS | 30.0% |
| ! | GAAGATATTTTGTGCTTGAT+TGG | + | chr4.2:24054758-24054777 | MS.gene39588:intron | 30.0% |
| ! | TGCCAATGGTTGATTATTTT+AGG | + | chr4.2:24056446-24056465 | MS.gene39588:intron | 30.0% |
| ! | TTTCTAAAGGAGTTGTTTGT+CGG | + | chr4.2:24053223-24053242 | MS.gene39588:CDS | 30.0% |
| !! | CTGTTTTGCAGTTTTATGTT+TGG | + | chr4.2:24054649-24054668 | MS.gene39588:intron | 30.0% |
| !! | TACCATCACTTTTATCAGAT+TGG | + | chr4.2:24054835-24054854 | MS.gene39588:intron | 30.0% |
| !!! | ATTCTGTTTTGAAATGCCAA+TGG | + | chr4.2:24056432-24056451 | MS.gene39588:intron | 30.0% |
| !!! | GAAAGTTTTAGACTTAGATC+AGG | + | chr4.2:24054054-24054073 | MS.gene39588:intron | 30.0% |
| !!! | TATTTTGGGATTACGTAGAA+AGG | + | chr4.2:24055097-24055116 | MS.gene39588:CDS | 30.0% |
| !!! | TTCTGTTTGTTTTAGTTCGA+CGG | + | chr4.2:24052462-24052481 | MS.gene39588:intron | 30.0% |
| !!! | TTTGCTGTTCTAGGTATTTT+GGG | + | chr4.2:24055083-24055102 | MS.gene39588:intron | 30.0% |
| !!! | TTTTGCTGTTCTAGGTATTT+TGG | + | chr4.2:24055082-24055101 | MS.gene39588:intron | 30.0% |
| AAAAATCGTTATCGTCGTTG+TGG | - | chr4.2:24053753-24053772 | None:intergenic | 35.0% | |
| AAACATTCCAAAAACCTTCC+GGG | + | chr4.2:24052720-24052739 | MS.gene39588:CDS | 35.0% | |
| AAATGGAATCATGGTTCAAC+TGG | + | chr4.2:24053560-24053579 | MS.gene39588:CDS | 35.0% | |
| AATTATTTGGCAGGGAAAGA+GGG | + | chr4.2:24053779-24053798 | MS.gene39588:intron | 35.0% | |
| AATTCCATGAACCATTGTAG+GGG | + | chr4.2:24053441-24053460 | MS.gene39588:intron | 35.0% | |
| ACATTATGGAAGATTGAGAC+TGG | + | chr4.2:24052761-24052780 | MS.gene39588:CDS | 35.0% | |
| ACCCAACTTAAATGGAATCA+TGG | + | chr4.2:24053551-24053570 | MS.gene39588:CDS | 35.0% | |
| AGTGTAAGATGTCATCCAAA+AGG | + | chr4.2:24055322-24055341 | MS.gene39588:intron | 35.0% | |
| ATGGCATCTCTTGAGATATT+AGG | + | chr4.2:24052373-24052392 | MS.gene39588:CDS | 35.0% | |
| ATTGGCTAAATTAGGACTAC+TGG | + | chr4.2:24054776-24054795 | MS.gene39588:intron | 35.0% | |
| ATTGTGTGCAAACTATTTGC+AGG | + | chr4.2:24055801-24055820 | MS.gene39588:intron | 35.0% | |
| CAAAATATCTTCCACCAGAA+AGG | - | chr4.2:24054750-24054769 | None:intergenic | 35.0% | |
| CAAACATTCCAAAAACCTTC+CGG | + | chr4.2:24052719-24052738 | MS.gene39588:CDS | 35.0% | |
| CATCTCTTGAGATATTAGGT+AGG | + | chr4.2:24052377-24052396 | MS.gene39588:intron | 35.0% | |
| CCATTTCCTTGACAAATCTT+CGG | - | chr4.2:24052998-24053017 | None:intergenic | 35.0% | |
| GACCAATCTGATAAAAGTGA+TGG | - | chr4.2:24054840-24054859 | None:intergenic | 35.0% | |
| GATGTTTGACAAGTTATACC+AGG | + | chr4.2:24055714-24055733 | MS.gene39588:CDS | 35.0% | |
| GTGATGTCACCAAATTTACT+TGG | - | chr4.2:24055847-24055866 | None:intergenic | 35.0% | |
| GTTCTACAACCCAACTTAAA+TGG | + | chr4.2:24053543-24053562 | MS.gene39588:CDS | 35.0% | |
| TAAGTCATGGTGAGAATGTT+AGG | - | chr4.2:24053089-24053108 | None:intergenic | 35.0% | |
| TAATTATTTGGCAGGGAAAG+AGG | + | chr4.2:24053778-24053797 | MS.gene39588:intron | 35.0% | |
| TATACTACCTGACAACAGAT+GGG | + | chr4.2:24053648-24053667 | MS.gene39588:CDS | 35.0% | |
| TGTCAATGTATCTCTTGTTC+AGG | + | chr4.2:24053118-24053137 | MS.gene39588:intron | 35.0% | |
| TTATACTACCTGACAACAGA+TGG | + | chr4.2:24053647-24053666 | MS.gene39588:CDS | 35.0% | |
| TTCAACTGGACTTCTAATTG+TGG | + | chr4.2:24053574-24053593 | MS.gene39588:CDS | 35.0% | |
| TTGTTTCCGAAGATTTGTCA+AGG | + | chr4.2:24052989-24053008 | MS.gene39588:intron | 35.0% | |
| ! | AATGTTTTCTCAAACCAACC+AGG | + | chr4.2:24053062-24053081 | MS.gene39588:intron | 35.0% |
| ! | GATACTGGGGATTTTTCTAA+AGG | + | chr4.2:24053210-24053229 | MS.gene39588:CDS | 35.0% |
| ! | TAAGTTGGGTTGTAGAACAT+CGG | - | chr4.2:24053541-24053560 | None:intergenic | 35.0% |
| ! | TGAGGATACATTTCCCTTTT+GGG | - | chr4.2:24054429-24054448 | None:intergenic | 35.0% |
| ! | TGTGCTTGATTGGCTAAATT+AGG | + | chr4.2:24054768-24054787 | MS.gene39588:intron | 35.0% |
| ! | TTTTTGTCACCAAACGAATG+AGG | + | chr4.2:24053364-24053383 | MS.gene39588:intron | 35.0% |
| !! | AGGTGCAATTTTTCGATACT+GGG | + | chr4.2:24053196-24053215 | MS.gene39588:CDS | 35.0% |
| !! | TAGAGTTTGCTGTTGTGTAT+GGG | + | chr4.2:24053837-24053856 | MS.gene39588:CDS | 35.0% |
| !! | TGATGATGGATCTTTGCTTA+TGG | + | chr4.2:24052580-24052599 | MS.gene39588:CDS | 35.0% |
| !! | TTAGAGTTTGCTGTTGTGTA+TGG | + | chr4.2:24053836-24053855 | MS.gene39588:CDS | 35.0% |
| !! | TTTGCAGTTTTATGTTTGGC+TGG | + | chr4.2:24054653-24054672 | MS.gene39588:intron | 35.0% |
| !!! | CTTTGTTTTTTCCTTTCTGG+TGG | + | chr4.2:24054736-24054755 | MS.gene39588:intron | 35.0% |
| !!! | TTTTCAAGTTCCTAATCTCG+TGG | + | chr4.2:24052664-24052683 | MS.gene39588:CDS | 35.0% |
| AAAACAGAAGCCACGAGATT+AGG | - | chr4.2:24052677-24052696 | None:intergenic | 40.0% | |
| AAACAAAGAAAGGGAGGGAA+AGG | - | chr4.2:24056393-24056412 | None:intergenic | 40.0% | |
| AAATCTAAGAAGGACCCTTG+AGG | + | chr4.2:24054522-24054541 | MS.gene39588:intron | 40.0% | |
| AATCTAAGAAGGACCCTTGA+GGG | + | chr4.2:24054523-24054542 | MS.gene39588:intron | 40.0% | |
| AATGGTCTGTGTCAAGTGAA+TGG | + | chr4.2:24055145-24055164 | MS.gene39588:CDS | 40.0% | |
| AATGTATCTCTTGTTCAGGC+CGG | + | chr4.2:24053122-24053141 | MS.gene39588:intron | 40.0% | |
| AGAATATGACAAGGGCCAAT+TGG | + | chr4.2:24052810-24052829 | MS.gene39588:CDS | 40.0% | |
| AGGGAATATCTAGTCCAGTT+GGG | - | chr4.2:24054177-24054196 | None:intergenic | 40.0% | |
| AGGTGATATAGAAAGCTCAG+CGG | - | chr4.2:24053271-24053290 | None:intergenic | 40.0% | |
| ATACTACCTGACAACAGATG+GGG | + | chr4.2:24053649-24053668 | MS.gene39588:CDS | 40.0% | |
| ATAGTAATCAAACCAAGCCC+TGG | - | chr4.2:24053952-24053971 | None:intergenic | 40.0% | |
| ATCAGAAAACATGCTATGGG+AGG | + | chr4.2:24055572-24055591 | MS.gene39588:intron | 40.0% | |
| ATGCAATGACATCTGCGAAA+AGG | - | chr4.2:24055783-24055802 | None:intergenic | 40.0% | |
| ATTATTTGGCAGGGAAAGAG+GGG | + | chr4.2:24053780-24053799 | MS.gene39588:intron | 40.0% | |
| ATTCCATGAACCATTGTAGG+GGG | + | chr4.2:24053442-24053461 | MS.gene39588:intron | 40.0% | |
| ATTTGGCACGCTGTGATTTA+GGG | + | chr4.2:24053403-24053422 | MS.gene39588:intron | 40.0% | |
| CAAACTATTTGCAGGCTGAT+TGG | + | chr4.2:24055809-24055828 | MS.gene39588:intron | 40.0% | |
| CCAGAGTCACCAAGTAAATT+TGG | + | chr4.2:24055835-24055854 | MS.gene39588:CDS | 40.0% | |
| CCGAAGATTTGTCAAGGAAA+TGG | + | chr4.2:24052995-24053014 | MS.gene39588:intron | 40.0% | |
| CTAAGTCTCCATGATTGTTG+AGG | - | chr4.2:24053339-24053358 | None:intergenic | 40.0% | |
| CTTGACCTGCAAAAAGTTCA+TGG | - | chr4.2:24055995-24056014 | None:intergenic | 40.0% | |
| GAAAAAGAGGGAGAAACAGA+AGG | + | chr4.2:24056498-24056517 | MS.gene39588:CDS | 40.0% | |
| GACCATTGAGCATCATGAAT+AGG | - | chr4.2:24053806-24053825 | None:intergenic | 40.0% | |
| GATGCTCAATGGTCAAATTC+AGG | + | chr4.2:24053812-24053831 | MS.gene39588:CDS | 40.0% | |
| GCAAAAATTTGTACACTGGC+AGG | - | chr4.2:24053470-24053489 | None:intergenic | 40.0% | |
| GCAAACATTTGCTTCGTATG+AGG | + | chr4.2:24055042-24055061 | MS.gene39588:intron | 40.0% | |
| GCATCAATTCCTCATTCGTT+TGG | - | chr4.2:24053376-24053395 | None:intergenic | 40.0% | |
| GGAGAAACAGAAGGAGAAAA+AGG | + | chr4.2:24056507-24056526 | MS.gene39588:CDS | 40.0% | |
| TATTTGGCACGCTGTGATTT+AGG | + | chr4.2:24053402-24053421 | MS.gene39588:intron | 40.0% | |
| TCAGAGCTGAATTGAATTGC+CGG | - | chr4.2:24053144-24053163 | None:intergenic | 40.0% | |
| TGCATTTGTTCCAGAATCCA+AGG | + | chr4.2:24053305-24053324 | MS.gene39588:CDS | 40.0% | |
| TGTATCCTCAGCTGATGATT+TGG | + | chr4.2:24054439-24054458 | MS.gene39588:intron | 40.0% | |
| TTCCATCGGATAGTGTTGTA+AGG | - | chr4.2:24054406-24054425 | None:intergenic | 40.0% | |
| ! | ATGGGAGGATATTTTGCTGA+TGG | + | chr4.2:24055587-24055606 | MS.gene39588:intron | 40.0% |
| ! | CAAGGATTGGAACTTTGAAG+AGG | + | chr4.2:24054553-24054572 | MS.gene39588:intron | 40.0% |
| ! | CATGAACTTTTTGCAGGTCA+AGG | + | chr4.2:24055993-24056012 | MS.gene39588:intron | 40.0% |
| ! | CCAAATTTACTTGGTGACTC+TGG | - | chr4.2:24055838-24055857 | None:intergenic | 40.0% |
| ! | CTGAGGATACATTTCCCTTT+TGG | - | chr4.2:24054430-24054449 | None:intergenic | 40.0% |
| ! | GAAGACCATGAACTTTTTGC+AGG | + | chr4.2:24055987-24056006 | MS.gene39588:intron | 40.0% |
| ! | TCAAACAGAGTTGCTTTAGC+AGG | - | chr4.2:24054346-24054365 | None:intergenic | 40.0% |
| ! | TGATGGATCTTTGCTTATGG+TGG | + | chr4.2:24052583-24052602 | MS.gene39588:CDS | 40.0% |
| !! | CAAGGCTTCAAGTTGACAAT+GGG | + | chr4.2:24055208-24055227 | MS.gene39588:CDS | 40.0% |
| !! | GAGGTGCAATTTTTCGATAC+TGG | + | chr4.2:24053195-24053214 | MS.gene39588:CDS | 40.0% |
| !! | GGTGCAATTTTTCGATACTG+GGG | + | chr4.2:24053197-24053216 | MS.gene39588:CDS | 40.0% |
| !!! | ATTTCCCTTTTGGGTTCCAT+CGG | - | chr4.2:24054420-24054439 | None:intergenic | 40.0% |
| !!! | GTTTTATGTTTGGCTGGCTT+CGG | + | chr4.2:24054659-24054678 | MS.gene39588:intron | 40.0% |
| AAACTCAACCTATGGCTCGA+CGG | + | chr4.2:24053507-24053526 | MS.gene39588:CDS | 45.0% | |
| AAGCATGGCAAAGAACCTGA+TGG | - | chr4.2:24055916-24055935 | None:intergenic | 45.0% | |
| AAGCCATAACGATACCCAAC+TGG | + | chr4.2:24054160-24054179 | MS.gene39588:intron | 45.0% | |
| AATGCAGCTACATGAGAAGC+AGG | - | chr4.2:24053291-24053310 | None:intergenic | 45.0% | |
| ACTATCCGATGGAACCCAAA+AGG | + | chr4.2:24054412-24054431 | MS.gene39588:CDS | 45.0% | |
| AGTTCGAGATACTACTGACC+TGG | - | chr4.2:24055735-24055754 | None:intergenic | 45.0% | |
| ATGGGTATGTTTGTCCACTG+TGG | + | chr4.2:24055226-24055245 | MS.gene39588:intron | 45.0% | |
| ATGGTGAGAATGTTAGGACC+TGG | - | chr4.2:24053083-24053102 | None:intergenic | 45.0% | |
| CAAGTGAATGGTCTCCAGAT+GGG | + | chr4.2:24055157-24055176 | MS.gene39588:CDS | 45.0% | |
| CAGGGAATATCTAGTCCAGT+TGG | - | chr4.2:24054178-24054197 | None:intergenic | 45.0% | |
| CCATTGTCAACTTGAAGCCT+TGG | - | chr4.2:24055210-24055229 | None:intergenic | 45.0% | |
| CTATCCGATGGAACCCAAAA+GGG | + | chr4.2:24054413-24054432 | MS.gene39588:CDS | 45.0% | |
| CTATTCGAAAGCAGGACTTG+TGG | + | chr4.2:24053968-24053987 | MS.gene39588:intron | 45.0% | |
| GAAACAGCTTGCATCAACCA+AGG | + | chr4.2:24055119-24055138 | MS.gene39588:CDS | 45.0% | |
| GAAGAATGCTCACTATGGAC+TGG | + | chr4.2:24052488-24052507 | MS.gene39588:CDS | 45.0% | |
| GGAGAACATACCATATCACC+AGG | - | chr4.2:24054692-24054711 | None:intergenic | 45.0% | |
| GGCCTATTCATGATGCTCAA+TGG | + | chr4.2:24053801-24053820 | MS.gene39588:CDS | 45.0% | |
| GTCATGAAATAGCACCCATC+TGG | - | chr4.2:24055174-24055193 | None:intergenic | 45.0% | |
| GTCCATAGTGAGCATTCTTC+CGG | - | chr4.2:24052488-24052507 | None:intergenic | 45.0% | |
| GTCCTTACAACACTATCCGA+TGG | + | chr4.2:24054401-24054420 | MS.gene39588:CDS | 45.0% | |
| GTTTGCAAATAAGTTCCGCG+AGG | - | chr4.2:24052704-24052723 | None:intergenic | 45.0% | |
| TAAGACTGCAGCTGCTATTC+AGG | + | chr4.2:24056100-24056119 | MS.gene39588:CDS | 45.0% | |
| TCAAGTGAATGGTCTCCAGA+TGG | + | chr4.2:24055156-24055175 | MS.gene39588:CDS | 45.0% | |
| TCTGTGCTCCTCAACAATCA+TGG | + | chr4.2:24053328-24053347 | MS.gene39588:intron | 45.0% | |
| TGAGAATGTTAGGACCTGGT+TGG | - | chr4.2:24053079-24053098 | None:intergenic | 45.0% | |
| TGATGCCAAATCATCAGCTG+AGG | - | chr4.2:24054447-24054466 | None:intergenic | 45.0% | |
| TGCTTCCCAAACTCAACCTA+TGG | + | chr4.2:24053499-24053518 | MS.gene39588:CDS | 45.0% | |
| TGGGTATGTTTGTCCACTGT+GGG | + | chr4.2:24055227-24055246 | MS.gene39588:intron | 45.0% | |
| TTGCATCAACCAAGGCTGAA+TGG | + | chr4.2:24055127-24055146 | MS.gene39588:CDS | 45.0% | |
| TTGCTTAAGATACCAGGGCT+TGG | + | chr4.2:24053937-24053956 | MS.gene39588:intron | 45.0% | |
| TTTGGCACGCTGTGATTTAG+GGG | + | chr4.2:24053404-24053423 | MS.gene39588:intron | 45.0% | |
| ! | AAGAGGCTTTTGTAGTGGCT+TGG | - | chr4.2:24056031-24056050 | None:intergenic | 45.0% |
| ! | AGAGGCTTTTGTAGTGGCTT+GGG | - | chr4.2:24056030-24056049 | None:intergenic | 45.0% |
| ! | AGTCCAGTTGGGTATCGTTA+TGG | - | chr4.2:24054166-24054185 | None:intergenic | 45.0% |
| ! | CAACATAATCAGAGTGCCCA+TGG | - | chr4.2:24055300-24055319 | None:intergenic | 45.0% |
| ! | GTTTGTCGGTTAAGAGTTCC+AGG | + | chr4.2:24053237-24053256 | MS.gene39588:CDS | 45.0% |
| ! | TCGAGCCATAGGTTGAGTTT+GGG | - | chr4.2:24053507-24053526 | None:intergenic | 45.0% |
| ! | TGGTTTTTGTGCAGTTGGGT+TGG | - | chr4.2:24056057-24056076 | None:intergenic | 45.0% |
| !! | CCAAGGCTTCAAGTTGACAA+TGG | + | chr4.2:24055207-24055226 | MS.gene39588:CDS | 45.0% |
| !!! | GTTTGTTTTAGTTCGACGGC+CGG | + | chr4.2:24052466-24052485 | MS.gene39588:intron | 45.0% |
| AAAAAGCTCCGTCGAGCCAT+AGG | - | chr4.2:24053518-24053537 | None:intergenic | 50.0% | |
| ACAACAGATGGGGTGCATGA+AGG | + | chr4.2:24053659-24053678 | MS.gene39588:CDS | 50.0% | |
| AGAAGGACCCTTGAGGGTTA+TGG | + | chr4.2:24054529-24054548 | MS.gene39588:intron | 50.0% | |
| AGTAGATCAAGACCCCACAG+TGG | - | chr4.2:24055243-24055262 | None:intergenic | 50.0% | |
| ATCCTTGCCCATAACCCTCA+AGG | - | chr4.2:24054540-24054559 | None:intergenic | 50.0% | |
| ATGCCGTGTGCCAACTAATG+AGG | + | chr4.2:24053176-24053195 | MS.gene39588:CDS | 50.0% | |
| ATTAGTTGGCACACGGCATG+CGG | - | chr4.2:24053175-24053194 | None:intergenic | 50.0% | |
| GAACCCCCTACAATGGTTCA+TGG | - | chr4.2:24053448-24053467 | None:intergenic | 50.0% | |
| GAAGGACCCTTGAGGGTTAT+GGG | + | chr4.2:24054530-24054549 | MS.gene39588:intron | 50.0% | |
| GACATTCTTATCTTGCGGCC+CGG | - | chr4.2:24052741-24052760 | None:intergenic | 50.0% | |
| GCACCTCATTAGTTGGCACA+CGG | - | chr4.2:24053182-24053201 | None:intergenic | 50.0% | |
| GGGTATGTTTGTCCACTGTG+GGG | + | chr4.2:24055228-24055247 | MS.gene39588:intron | 50.0% | |
| TCCTTGCCCATAACCCTCAA+GGG | - | chr4.2:24054539-24054558 | None:intergenic | 50.0% | |
| TGACACAGACCATTCAGCCT+TGG | - | chr4.2:24055139-24055158 | None:intergenic | 50.0% | |
| TGACAGCAACAACAGCTCCA+AGG | + | chr4.2:24055190-24055209 | MS.gene39588:CDS | 50.0% | |
| TGACATTCGGTTGACCGTTC+TGG | - | chr4.2:24052523-24052542 | None:intergenic | 50.0% | |
| TGAGGGTTATGGGCAAGGAT+TGG | + | chr4.2:24054540-24054559 | MS.gene39588:intron | 50.0% | |
| ! | CAAGAAGTGCAGACCTCTAC+TGG | + | chr4.2:24054366-24054385 | MS.gene39588:CDS | 50.0% |
| ! | CGGTAACTTGCCTGGTGATA+TGG | + | chr4.2:24054679-24054698 | MS.gene39588:CDS | 50.0% |
| ! | GGCAGAAGAGGCTTTTGTAG+TGG | - | chr4.2:24056036-24056055 | None:intergenic | 50.0% |
| ! | GTCGAGCCATAGGTTGAGTT+TGG | - | chr4.2:24053508-24053527 | None:intergenic | 50.0% |
| ! | TTGTTGAGGAGCACAGACCT+TGG | - | chr4.2:24053325-24053344 | None:intergenic | 50.0% |
| !! | GCTTTTGTAGTGGCTTGGGT+TGG | - | chr4.2:24056026-24056045 | None:intergenic | 50.0% |
| !! | GTAGTGGCTTGGGTTGGTTT+AGG | - | chr4.2:24056020-24056039 | None:intergenic | 50.0% |
| !! | GTTGACCGTTCTGGAATGGA+GGG | - | chr4.2:24052514-24052533 | None:intergenic | 50.0% |
| !! | TTCGGTTGACCGTTCTGGAA+TGG | - | chr4.2:24052518-24052537 | None:intergenic | 50.0% |
| !!! | CGGCTGGTTTTTGTGCAGTT+GGG | - | chr4.2:24056061-24056080 | None:intergenic | 50.0% |
| ACCCTTGAGGGTTATGGGCA+AGG | + | chr4.2:24054535-24054554 | MS.gene39588:intron | 55.0% | |
| ACTGGCCCTCCATTCCAGAA+CGG | + | chr4.2:24052506-24052525 | MS.gene39588:CDS | 55.0% | |
| AGCATGCGGTGGACGATATG+CGG | - | chr4.2:24056081-24056100 | None:intergenic | 55.0% | |
| CATGCACCCCATCTGTTGTC+AGG | - | chr4.2:24053658-24053677 | None:intergenic | 55.0% | |
| CCAGTTCCAAGCTCCAGTAG+AGG | - | chr4.2:24054382-24054401 | None:intergenic | 55.0% | |
| CCTCTACTGGAGCTTGGAAC+TGG | + | chr4.2:24054379-24054398 | MS.gene39588:CDS | 55.0% | |
| GCAGCTGCAGTCTTAGCATG+CGG | - | chr4.2:24056095-24056114 | None:intergenic | 55.0% | |
| GGAGCACAGACCTTGGATTC+TGG | - | chr4.2:24053318-24053337 | None:intergenic | 55.0% | |
| GGCCGGAAGAATGCTCACTA+TGG | + | chr4.2:24052483-24052502 | MS.gene39588:CDS | 55.0% | |
| TGCAGACCTCTACTGGAGCT+TGG | + | chr4.2:24054373-24054392 | MS.gene39588:CDS | 55.0% | |
| TGCAGCTGCTATTCAGGCAG+AGG | + | chr4.2:24056106-24056125 | MS.gene39588:CDS | 55.0% | |
| TTCTTATCTTGCGGCCCGGA+AGG | - | chr4.2:24052737-24052756 | None:intergenic | 55.0% | |
| ! | GCTTCTGTTTTGTCGCCTCG+CGG | + | chr4.2:24052686-24052705 | MS.gene39588:CDS | 55.0% |
| !! | GGTTGACCGTTCTGGAATGG+AGG | - | chr4.2:24052515-24052534 | None:intergenic | 55.0% |
| !! | TGCAGTTGGGTTGGCAGAAG+AGG | - | chr4.2:24056048-24056067 | None:intergenic | 55.0% |
| !!! | GCGGCTGGTTTTTGTGCAGT+TGG | - | chr4.2:24056062-24056081 | None:intergenic | 55.0% |
| AGCTCAGCGGAAGCAACTCC+TGG | - | chr4.2:24053258-24053277 | None:intergenic | 60.0% | |
| CTGGCAGGAACCCCCTACAA+TGG | - | chr4.2:24053455-24053474 | None:intergenic | 60.0% | |
| GCTGCAGTCTTAGCATGCGG+TGG | - | chr4.2:24056092-24056111 | None:intergenic | 60.0% | |
| ! | CTTGCGGCCCGGAAGGTTTT+TGG | - | chr4.2:24052730-24052749 | None:intergenic | 60.0% |
| ! | GCTGGCTTCGGTAACTTGCC+TGG | + | chr4.2:24054671-24054690 | MS.gene39588:CDS | 60.0% |
| TGCGGTGGACGATATGCGGC+TGG | - | chr4.2:24056077-24056096 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 24052373 | 24056552 | 24052373 | ID=MS.gene39588 |
| chr4.2 | mRNA | 24052373 | 24056552 | 24052373 | ID=MS.gene39588.t1;Parent=MS.gene39588 |
| chr4.2 | exon | 24052373 | 24052394 | 24052373 | ID=MS.gene39588.t1.exon1;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24052373 | 24052394 | 24052373 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24052477 | 24052831 | 24052477 | ID=MS.gene39588.t1.exon2;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24052477 | 24052831 | 24052477 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24053140 | 24053326 | 24053140 | ID=MS.gene39588.t1.exon3;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24053140 | 24053326 | 24053140 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24053461 | 24053695 | 24053461 | ID=MS.gene39588.t1.exon4;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24053461 | 24053695 | 24053461 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24053792 | 24053860 | 24053792 | ID=MS.gene39588.t1.exon5;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24053792 | 24053860 | 24053792 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24054338 | 24054439 | 24054338 | ID=MS.gene39588.t1.exon6;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24054338 | 24054439 | 24054338 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24054660 | 24054700 | 24054660 | ID=MS.gene39588.t1.exon7;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24054660 | 24054700 | 24054660 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24055096 | 24055229 | 24055096 | ID=MS.gene39588.t1.exon8;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24055096 | 24055229 | 24055096 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24055672 | 24055735 | 24055672 | ID=MS.gene39588.t1.exon9;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24055672 | 24055735 | 24055672 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24055823 | 24055919 | 24055823 | ID=MS.gene39588.t1.exon10;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24055823 | 24055919 | 24055823 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24056009 | 24056127 | 24056009 | ID=MS.gene39588.t1.exon11;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24056009 | 24056127 | 24056009 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24056360 | 24056382 | 24056360 | ID=MS.gene39588.t1.exon12;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24056360 | 24056382 | 24056360 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| chr4.2 | exon | 24056468 | 24056552 | 24056468 | ID=MS.gene39588.t1.exon13;Parent=MS.gene39588.t1 |
| chr4.2 | CDS | 24056468 | 24056552 | 24056468 | ID=cds.MS.gene39588.t1;Parent=MS.gene39588.t1 |
| Gene Sequence |
| Protein sequence |
