Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27709.t1 | XP_003608061.1 | 91.1 | 508 | 15 | 1 | 1 | 508 | 1 | 478 | 9.80E-272 | 945.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27709.t1 | O74965 | 36.8 | 435 | 253 | 8 | 74 | 503 | 39 | 456 | 3.2e-77 | 290.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27709.t1 | G7JNL0 | 91.1 | 508 | 15 | 1 | 1 | 508 | 1 | 478 | 7.1e-272 | 945.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27709 | MS.gene82426 | PPI |
| MS.gene27709 | MS.gene037362 | PPI |
| MS.gene27709 | MS.gene40016 | PPI |
| MS.gene01984 | MS.gene27709 | PPI |
| MS.gene27709 | MS.gene58159 | PPI |
| MS.gene023135 | MS.gene27709 | PPI |
| MS.gene27709 | MS.gene048301 | PPI |
| MS.gene27709 | MS.gene028318 | PPI |
| MS.gene27709 | MS.gene83444 | PPI |
| MS.gene27709 | MS.gene35140 | PPI |
| MS.gene028153 | MS.gene27709 | PPI |
| MS.gene004699 | MS.gene27709 | PPI |
| MS.gene27709 | MS.gene70303 | PPI |
| MS.gene27709 | MS.gene029211 | PPI |
| MS.gene27709 | MS.gene32083 | PPI |
| MS.gene27709 | MS.gene93131 | PPI |
| MS.gene27709 | MS.gene72768 | PPI |
| MS.gene27709 | MS.gene036254 | PPI |
| MS.gene27709 | MS.gene003175 | PPI |
| MS.gene27709 | MS.gene36472 | PPI |
| MS.gene02854 | MS.gene27709 | PPI |
| MS.gene27709 | MS.gene030823 | PPI |
| MS.gene030707 | MS.gene27709 | PPI |
| MS.gene27709 | MS.gene28161 | PPI |
| MS.gene27709 | MS.gene57305 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27709.t1 | MTR_4g087280 | 91.758 | 546 | 15 | 1 | 1 | 546 | 1 | 516 | 0.0 | 1026 |
| MS.gene27709.t1 | MTR_4g087280 | 91.016 | 512 | 16 | 1 | 1 | 512 | 1 | 482 | 0.0 | 962 |
| MS.gene27709.t1 | MTR_5g091610 | 69.892 | 93 | 16 | 2 | 368 | 460 | 126 | 206 | 3.81e-35 | 133 |
| MS.gene27709.t1 | MTR_3g105430 | 24.500 | 400 | 263 | 14 | 81 | 450 | 224 | 614 | 5.03e-22 | 100 |
| MS.gene27709.t1 | MTR_2g088350 | 97.436 | 39 | 1 | 0 | 433 | 471 | 1 | 39 | 7.50e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27709.t1 | AT1G73180 | 67.010 | 485 | 156 | 1 | 42 | 526 | 9 | 489 | 0.0 | 709 |
| MS.gene27709.t1 | AT1G73180 | 67.091 | 471 | 151 | 1 | 42 | 512 | 9 | 475 | 0.0 | 694 |
| MS.gene27709.t1 | AT5G27640 | 25.138 | 362 | 233 | 13 | 117 | 448 | 257 | 610 | 3.86e-23 | 104 |
| MS.gene27709.t1 | AT5G27640 | 25.138 | 362 | 233 | 13 | 117 | 448 | 257 | 610 | 3.86e-23 | 104 |
| MS.gene27709.t1 | AT5G27640 | 25.138 | 362 | 233 | 13 | 117 | 448 | 283 | 636 | 4.02e-23 | 104 |
| MS.gene27709.t1 | AT5G25780 | 24.725 | 364 | 235 | 14 | 117 | 450 | 258 | 612 | 5.94e-22 | 100 |
Find 111 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGTTGTTCTAGGTATTT+TGG | 0.145052 | 7.2:+28899809 | MS.gene27709:intron |
| CTGAGGATACATTTCCCTTT+TGG | 0.184033 | 7.2:-28899154 | None:intergenic |
| GTTCGACAACCCAACTTAAA+TGG | 0.232051 | 7.2:+28898339 | MS.gene27709:CDS |
| GTAGAAACTTGGGTTAGTTT+TGG | 0.293588 | 7.2:-28900757 | None:intergenic |
| TGGTAACTTGCCTGGTGATA+TGG | 0.298473 | 7.2:+28899413 | MS.gene27709:CDS |
| TAAGACTGCAGCTGCTATTC+AGG | 0.307860 | 7.2:+28900840 | MS.gene27709:CDS |
| CCAAGGCTTCAAGTTGATAA+TGG | 0.310346 | 7.2:+28899934 | MS.gene27709:CDS |
| TGATATTCGGCTGACCGTTC+TGG | 0.314919 | 7.2:-28896859 | None:intergenic |
| TCACCATCTCTTGAGATATT+AGG | 0.332620 | 7.2:+28896704 | MS.gene27709:CDS |
| GGAGAAACAGAAGGAGAAAA+AGG | 0.336853 | 7.2:+28901247 | MS.gene27709:CDS |
| ACTTTATCAAGTTTGATATT+CGG | 0.349661 | 7.2:-28896872 | None:intergenic |
| AGCTCAGCGGAAGCAACTCC+TGG | 0.358438 | 7.2:-28898053 | None:intergenic |
| TTAGAGTTTGCTGTTGTGTA+TGG | 0.359900 | 7.2:+28898632 | MS.gene27709:CDS |
| AAAACAAATCAGAGTTACTA+TGG | 0.360928 | 7.2:+28898410 | MS.gene27709:CDS |
| TCATGTAGCTGCATTTGTTC+CGG | 0.362478 | 7.2:+28898094 | MS.gene27709:CDS |
| GACGCTCAATGGTCAAATTC+AGG | 0.376136 | 7.2:+28898608 | MS.gene27709:CDS |
| GTCCTTACAACACTATTAGA+TGG | 0.377426 | 7.2:+28899128 | MS.gene27709:CDS |
| GCTGGCTTTGGTAACTTGCC+TGG | 0.385881 | 7.2:+28899405 | MS.gene27709:CDS |
| AACCATGATTCCATTTAAGT+TGG | 0.389606 | 7.2:-28898349 | None:intergenic |
| TCAGAACTGAATTGAATTGC+CGG | 0.391942 | 7.2:-28897939 | None:intergenic |
| GGCCGGAAGAATGCTCACTA+TGG | 0.392731 | 7.2:+28896822 | MS.gene27709:CDS |
| GTTTGTCGGTTAAGAGTTCC+AGG | 0.393269 | 7.2:+28898035 | MS.gene27709:CDS |
| TGATGATGGATCTTTGCTTA+TGG | 0.395412 | 7.2:+28896919 | MS.gene27709:CDS |
| CAAGAAGTGCAGACCTCTAC+TGG | 0.395633 | 7.2:+28899093 | MS.gene27709:CDS |
| TGCTTCCCAAAGTCAACCTT+TGG | 0.397006 | 7.2:+28898295 | MS.gene27709:CDS |
| GATTTGTATTTGCAGTTGTT+AGG | 0.397376 | 7.2:+28901086 | MS.gene27709:intron |
| CCAGAGTCACCAAGTAAGTT+TGG | 0.409258 | 7.2:+28900575 | MS.gene27709:CDS |
| GACCATTGAGCGTCATGAAT+AGG | 0.411012 | 7.2:-28898599 | None:intergenic |
| GTCGAGCCAAAGGTTGACTT+TGG | 0.418629 | 7.2:-28898301 | None:intergenic |
| AAATGGAATCATGGTTCAAC+TGG | 0.419644 | 7.2:+28898356 | MS.gene27709:CDS |
| ATATATAGTAATGACAGAAT+TGG | 0.420958 | 7.2:-28896951 | None:intergenic |
| GGGGCACAAACCTTGGATTC+CGG | 0.423896 | 7.2:-28898113 | None:intergenic |
| AAGAGGCTTTGGTAGAAACT+TGG | 0.424743 | 7.2:-28900768 | None:intergenic |
| AAAACAGAAGCGACAAGATT+AGG | 0.427290 | 7.2:-28897013 | None:intergenic |
| GTCCATAGTGAGCATTCTTC+CGG | 0.434777 | 7.2:-28896824 | None:intergenic |
| CCATTATCAACTTGAAGCCT+TGG | 0.436250 | 7.2:-28899934 | None:intergenic |
| CATGCACCCCATCTGTTGTC+AGG | 0.436554 | 7.2:-28898451 | None:intergenic |
| CAAGGCTTCAAGTTGATAAT+GGG | 0.439727 | 7.2:+28899935 | MS.gene27709:CDS |
| TGGGTTGGCAGAAGAGGCTT+TGG | 0.441015 | 7.2:-28900779 | None:intergenic |
| TGCAGTTGGGTTGGCAGAAG+AGG | 0.444560 | 7.2:-28900785 | None:intergenic |
| AATATCAAACTTGATAAAGT+TGG | 0.447540 | 7.2:+28896875 | MS.gene27709:CDS |
| AGAATATCACAAGGGCCAAT+TGG | 0.452350 | 7.2:+28897149 | MS.gene27709:CDS |
| ACCATGATGCAATCACGAAC+TGG | 0.453181 | 7.2:-28901282 | None:intergenic |
| TTCTTATCTTGCGGCCCGGA+AGG | 0.454027 | 7.2:-28897073 | None:intergenic |
| CCAAACTTACTTGGTGACTC+TGG | 0.455157 | 7.2:-28900575 | None:intergenic |
| TAAATATTTGGCAGGGAAAG+AGG | 0.456809 | 7.2:+28898574 | MS.gene27709:intron |
| TCAAACAGAGTTGCTTTAGC+AGG | 0.461231 | 7.2:-28899070 | None:intergenic |
| TTTCTAAAGGAGTTGTTTGT+CGG | 0.461423 | 7.2:+28898021 | MS.gene27709:CDS |
| ACTATTAGATGGAACCCAAA+AGG | 0.463751 | 7.2:+28899139 | MS.gene27709:CDS |
| ACCATGATTCCATTTAAGTT+GGG | 0.465601 | 7.2:-28898348 | None:intergenic |
| GTGATGTCACCAAACTTACT+TGG | 0.470252 | 7.2:-28900584 | None:intergenic |
| GTCATGAAATAGCACCCATC+TGG | 0.472938 | 7.2:-28899898 | None:intergenic |
| AAGATAAGAATGTCACGTTA+TGG | 0.474442 | 7.2:+28897086 | MS.gene27709:CDS |
| CCTCTACTGGAGCTTGGAAC+TGG | 0.479313 | 7.2:+28899106 | MS.gene27709:CDS |
| TAGAGTTTGCTGTTGTGTAT+GGG | 0.481102 | 7.2:+28898633 | MS.gene27709:CDS |
| TCGAGCCAAAGGTTGACTTT+GGG | 0.484901 | 7.2:-28898300 | None:intergenic |
| TTGCATCAACCAAGGCTGAA+TGG | 0.489961 | 7.2:+28899854 | MS.gene27709:CDS |
| AATGCTAAATTCAGTGATGA+TGG | 0.493653 | 7.2:+28896905 | MS.gene27709:CDS |
| GCAAATAACTGTACACTAGC+AGG | 0.495599 | 7.2:-28898263 | None:intergenic |
| AAATATTTGGCAGGGAAAGA+GGG | 0.495759 | 7.2:+28898575 | MS.gene27709:intron |
| TTCCATCTAATAGTGTTGTA+AGG | 0.499388 | 7.2:-28899130 | None:intergenic |
| ACCCAACTTAAATGGAATCA+TGG | 0.499990 | 7.2:+28898347 | MS.gene27709:CDS |
| TGCAGACCTCTACTGGAGCT+TGG | 0.507684 | 7.2:+28899100 | MS.gene27709:CDS |
| GGCCTATTCATGACGCTCAA+TGG | 0.507777 | 7.2:+28898597 | MS.gene27709:CDS |
| AATGGTCTGTGTCAAGTGAA+TGG | 0.511021 | 7.2:+28899872 | MS.gene27709:CDS |
| AGAGGCTTTGGTAGAAACTT+GGG | 0.517544 | 7.2:-28900767 | None:intergenic |
| CTATTAGATGGAACCCAAAA+GGG | 0.520250 | 7.2:+28899140 | MS.gene27709:CDS |
| ACCGTTCTGGAATGGAGGGC+CGG | 0.520529 | 7.2:-28896846 | None:intergenic |
| GACATTCTTATCTTGCGGCC+CGG | 0.523594 | 7.2:-28897077 | None:intergenic |
| TGACACAGACCATTCAGCCT+TGG | 0.524004 | 7.2:-28899863 | None:intergenic |
| TTATACTACCTGACAACAGA+TGG | 0.526764 | 7.2:+28898443 | MS.gene27709:CDS |
| GGCTGACCGTTCTGGAATGG+AGG | 0.527129 | 7.2:-28896851 | None:intergenic |
| TTCGGCTGACCGTTCTGGAA+TGG | 0.531168 | 7.2:-28896854 | None:intergenic |
| TGCATTTGTTCCGGAATCCA+AGG | 0.531572 | 7.2:+28898103 | MS.gene27709:CDS |
| AACTTGAAGCCTTGGAGCTG+TGG | 0.534236 | 7.2:-28899926 | None:intergenic |
| GCAGTTGTTAGGAGAGAGCT+CGG | 0.541868 | 7.2:+28901097 | MS.gene27709:intron |
| AATGCAGCTACATGAGAAGC+AGG | 0.553166 | 7.2:-28898086 | None:intergenic |
| GAAGAATGCTCACTATGGAC+CGG | 0.563782 | 7.2:+28896827 | MS.gene27709:CDS |
| ACAACAGATGGGGTGCATGA+AGG | 0.565598 | 7.2:+28898455 | MS.gene27709:CDS |
| TGCAGCTGCTATTCAGGCAG+AGG | 0.568714 | 7.2:+28900846 | MS.gene27709:CDS |
| TAAGTTGGGTTGTCGAACAT+CGG | 0.570920 | 7.2:-28898334 | None:intergenic |
| TATACTACCTGACAACAGAT+GGG | 0.573112 | 7.2:+28898444 | MS.gene27709:CDS |
| AAAGTCAACCTTTGGCTCGA+CGG | 0.574610 | 7.2:+28898303 | MS.gene27709:CDS |
| TGTGGTGGACGATATGCAGC+AGG | 0.576118 | 7.2:-28900814 | None:intergenic |
| GCTGACCGTTCTGGAATGGA+GGG | 0.578157 | 7.2:-28896850 | None:intergenic |
| TGATGGATCTTTGCTTATGG+TGG | 0.578520 | 7.2:+28896922 | MS.gene27709:CDS |
| ATGTCGCGTGCCAACTAATG+AGG | 0.581366 | 7.2:+28897974 | MS.gene27709:CDS |
| AGTGTACAGTTATTTGCTTG+TGG | 0.590507 | 7.2:+28898269 | MS.gene27709:CDS |
| CTACCTAATATCTCAAGAGA+TGG | 0.600462 | 7.2:-28896707 | None:intergenic |
| CAAGTGAATGGTCTCCAGAT+GGG | 0.601629 | 7.2:+28899884 | MS.gene27709:CDS |
| AATATTTGGCAGGGAAAGAG+GGG | 0.604036 | 7.2:+28898576 | MS.gene27709:intron |
| TCAAGTGAATGGTCTCCAGA+TGG | 0.615111 | 7.2:+28899883 | MS.gene27709:CDS |
| CCAGTTCCAAGCTCCAGTAG+AGG | 0.620222 | 7.2:-28899106 | None:intergenic |
| AACGTGACATTCTTATCTTG+CGG | 0.626243 | 7.2:-28897082 | None:intergenic |
| TTCAACTGGACTTCTAATTG+TGG | 0.628741 | 7.2:+28898370 | MS.gene27709:CDS |
| ACGTTATGGAAGATTCAGAC+TGG | 0.630745 | 7.2:+28897100 | MS.gene27709:CDS |
| GCTGCAGTCTTAGCATGTGG+TGG | 0.635325 | 7.2:-28900829 | None:intergenic |
| GATGTTTGACAAGTTATACC+AGG | 0.635363 | 7.2:+28900454 | MS.gene27709:CDS |
| TGACAGCAACCACAGCTCCA+AGG | 0.639497 | 7.2:+28899917 | MS.gene27709:CDS |
| GGAGAACATACCATATCACC+AGG | 0.651350 | 7.2:-28899423 | None:intergenic |
| CATCTCTTGAGATATTAGGT+AGG | 0.653417 | 7.2:+28896708 | MS.gene27709:CDS |
| ATATCTCAAGAGATGGTGAG+TGG | 0.660148 | 7.2:-28896700 | None:intergenic |
| ACCGGCCCTCCATTCCAGAA+CGG | 0.667122 | 7.2:+28896845 | MS.gene27709:CDS |
| GAAACAGCTTGCATCAACCA+AGG | 0.668592 | 7.2:+28899846 | MS.gene27709:CDS |
| GCAGCTGCAGTCTTAGCATG+TGG | 0.669332 | 7.2:-28900832 | None:intergenic |
| GTAACACTACTAAAGAGACT+AGG | 0.672292 | 7.2:+28896978 | MS.gene27709:CDS |
| ATTCTCAGAAGAATATCACA+AGG | 0.693333 | 7.2:+28897140 | MS.gene27709:CDS |
| TTCTCAGAAGAATATCACAA+GGG | 0.702412 | 7.2:+28897141 | MS.gene27709:CDS |
| ATACTACCTGACAACAGATG+GGG | 0.704485 | 7.2:+28898445 | MS.gene27709:CDS |
| AGGTGAAATAGAAAGCTCAG+CGG | 0.730816 | 7.2:-28898066 | None:intergenic |
| GTTTGCAAATAAGTTCCGCG+AGG | 0.750889 | 7.2:-28897040 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTGTGTTTTAAATATT+TGG | + | chr7.2:28898562-28898581 | MS.gene27709:intron | 10.0% |
| !!! | ATCATAATTTTATTTTCTAT+CGG | - | chr7.2:28899548-28899567 | None:intergenic | 10.0% |
| !! | AACATAATAATTTAATCAGT+CGG | - | chr7.2:28899448-28899467 | None:intergenic | 15.0% |
| !! | TAATAAAATCTATTGATCTA+TGG | - | chr7.2:28900069-28900088 | None:intergenic | 15.0% |
| !! | TATTAATAAAAAACTATGCA+GGG | - | chr7.2:28898938-28898957 | None:intergenic | 15.0% |
| !! | TTTGAATAGAAACAATTAAT+AGG | - | chr7.2:28900894-28900913 | None:intergenic | 15.0% |
| !!! | ATAAACAATTGAATATTTTC+AGG | - | chr7.2:28899977-28899996 | None:intergenic | 15.0% |
| !!! | TCATAATTTTATTTTCTATC+GGG | - | chr7.2:28899547-28899566 | None:intergenic | 15.0% |
| !! | AAGAAACTTAAAACAAAGAA+AGG | - | chr7.2:28901144-28901163 | None:intergenic | 20.0% |
| !! | AATAATATAAGCAATTCTCA+TGG | + | chr7.2:28899625-28899644 | MS.gene27709:intron | 20.0% |
| !! | AATATCAAACTTGATAAAGT+TGG | + | chr7.2:28896875-28896894 | MS.gene27709:CDS | 20.0% |
| !! | AATGTTGAAAATAACGTTTA+TGG | - | chr7.2:28899654-28899673 | None:intergenic | 20.0% |
| !! | ACATAATAATTTAATCAGTC+GGG | - | chr7.2:28899447-28899466 | None:intergenic | 20.0% |
| !! | ACTTTATCAAGTTTGATATT+CGG | - | chr7.2:28896875-28896894 | None:intergenic | 20.0% |
| !! | AGAAACTTAAAACAAAGAAA+GGG | - | chr7.2:28901143-28901162 | None:intergenic | 20.0% |
| !! | ATATATAGTAATGACAGAAT+TGG | - | chr7.2:28896954-28896973 | None:intergenic | 20.0% |
| !! | CTATTAATAAAAAACTATGC+AGG | - | chr7.2:28898939-28898958 | None:intergenic | 20.0% |
| !! | GAATGAAAAATAAGGATTAA+AGG | - | chr7.2:28899013-28899032 | None:intergenic | 20.0% |
| !! | TTACAAAAACATACATAGAT+AGG | - | chr7.2:28896758-28896777 | None:intergenic | 20.0% |
| !!! | AAATCTAAAATTAAATCCCT+TGG | - | chr7.2:28900169-28900188 | None:intergenic | 20.0% |
| !!! | AAGATCACTTTATTGTTTTT+TGG | + | chr7.2:28898771-28898790 | MS.gene27709:intron | 20.0% |
| !!! | AGATCACTTTATTGTTTTTT+GGG | + | chr7.2:28898772-28898791 | MS.gene27709:intron | 20.0% |
| !!! | ATAACTGAAGTTTTTATTTC+TGG | + | chr7.2:28899695-28899714 | MS.gene27709:intron | 20.0% |
| !!! | ATCAAGATTTTTCACTATAA+TGG | + | chr7.2:28900413-28900432 | MS.gene27709:CDS | 20.0% |
| !!! | ATTTCTCGTATAGTTTTTAT+AGG | - | chr7.2:28897487-28897506 | None:intergenic | 20.0% |
| !!! | ATTTTGATATTTTCTGAAGA+TGG | + | chr7.2:28898689-28898708 | MS.gene27709:intron | 20.0% |
| !!! | ATTTTTCATTATGTTGTTCT+AGG | + | chr7.2:28899801-28899820 | MS.gene27709:intron | 20.0% |
| !!! | CATAATTTTATTTTCTATCG+GGG | - | chr7.2:28899546-28899565 | None:intergenic | 20.0% |
| !!! | TCAAGATTTTTCACTATAAT+GGG | + | chr7.2:28900414-28900433 | MS.gene27709:CDS | 20.0% |
| !!! | TCATATAAAGTATCTAAATC+TGG | + | chr7.2:28899326-28899345 | MS.gene27709:intron | 20.0% |
| !!! | TTAATTTGATGACATTTATG+AGG | + | chr7.2:28900279-28900298 | MS.gene27709:intron | 20.0% |
| ! | AAAACAAATCAGAGTTACTA+TGG | + | chr7.2:28898410-28898429 | MS.gene27709:CDS | 25.0% |
| ! | AATCAATCTGATAAAAGTGA+TGG | - | chr7.2:28899574-28899593 | None:intergenic | 25.0% |
| ! | AATGAAAAATGCTTTCTTAG+TGG | - | chr7.2:28900367-28900386 | None:intergenic | 25.0% |
| ! | AATTGTTTATCTTTACCCAT+GGG | + | chr7.2:28899987-28900006 | MS.gene27709:intron | 25.0% |
| ! | AGAAACAATTAATAGGTCAT+TGG | - | chr7.2:28900887-28900906 | None:intergenic | 25.0% |
| ! | CAAAATATCTTCCACAAATA+AGG | - | chr7.2:28899484-28899503 | None:intergenic | 25.0% |
| ! | CAAAATTGTTATACTCATTG+TGG | - | chr7.2:28898549-28898568 | None:intergenic | 25.0% |
| ! | TAACGAGTTAGATCAAAATA+TGG | + | chr7.2:28897528-28897547 | MS.gene27709:intron | 25.0% |
| ! | TCACTTGGTTATATATAACT+TGG | + | chr7.2:28900197-28900216 | MS.gene27709:intron | 25.0% |
| ! | TGAATCATGATAGAACATTA+TGG | + | chr7.2:28897555-28897574 | MS.gene27709:intron | 25.0% |
| ! | TGACCTAAAATAATAACCAT+TGG | - | chr7.2:28901192-28901211 | None:intergenic | 25.0% |
| ! | TTTAAAGAAGAACTGATGAT+TGG | + | chr7.2:28898512-28898531 | MS.gene27709:intron | 25.0% |
| ! | TTTACGAAACAAGAAAAAGA+GGG | + | chr7.2:28901226-28901245 | MS.gene27709:CDS | 25.0% |
| !! | AACTCTTTGAAAATAACAGT+AGG | + | chr7.2:28898818-28898837 | MS.gene27709:intron | 25.0% |
| !! | AAGAAAATAAAAGCAGCTTT+TGG | - | chr7.2:28900046-28900065 | None:intergenic | 25.0% |
| !! | ACTGCAAATACAAATCATTT+TGG | - | chr7.2:28901082-28901101 | None:intergenic | 25.0% |
| !! | ATGCCAATGGTTATTATTTT+AGG | + | chr7.2:28901186-28901205 | MS.gene27709:intron | 25.0% |
| !! | TCTCTCTTTTAAATCTAAGA+AGG | + | chr7.2:28899249-28899268 | MS.gene27709:intron | 25.0% |
| !! | TTATTTTCGAAGATTTGTCA+AGG | + | chr7.2:28897780-28897799 | MS.gene27709:intron | 25.0% |
| !! | TTTGAAATCATATACACGAA+GGG | - | chr7.2:28898883-28898902 | None:intergenic | 25.0% |
| !! | TTTTGTTCTTTTTCCATTGA+AGG | + | chr7.2:28900390-28900409 | MS.gene27709:intron | 25.0% |
| !!! | AATCCTTATTTTTCATTCGT+TGG | + | chr7.2:28899015-28899034 | MS.gene27709:intron | 25.0% |
| !!! | CATTGTTTTTTCCTTATTTG+TGG | + | chr7.2:28899470-28899489 | MS.gene27709:intron | 25.0% |
| !!! | TATGTTGTTCTAGGTATTTT+GGG | + | chr7.2:28899810-28899829 | MS.gene27709:intron | 25.0% |
| !!! | TGTGTTTTAAATATTTGGCA+GGG | + | chr7.2:28898567-28898586 | MS.gene27709:intron | 25.0% |
| !!! | TTATGTTGTTCTAGGTATTT+TGG | + | chr7.2:28899809-28899828 | MS.gene27709:intron | 25.0% |
| !!! | TTGTGTTTTAAATATTTGGC+AGG | + | chr7.2:28898566-28898585 | MS.gene27709:intron | 25.0% |
| !!! | TTTTGAAATCATATACACGA+AGG | - | chr7.2:28898884-28898903 | None:intergenic | 25.0% |
| AAAAATTGCACCTCATTAGT+TGG | - | chr7.2:28897987-28898006 | None:intergenic | 30.0% | |
| AAACTCATCCAAGAATTCTA+GGG | - | chr7.2:28901034-28901053 | None:intergenic | 30.0% | |
| AAATTAAATCCCTTGGTTAC+AGG | - | chr7.2:28900162-28900181 | None:intergenic | 30.0% | |
| AACAATAAGAACATACGAAG+AGG | - | chr7.2:28898488-28898507 | None:intergenic | 30.0% | |
| AACCATGATTCCATTTAAGT+TGG | - | chr7.2:28898352-28898371 | None:intergenic | 30.0% | |
| AACTTAAAACAAAGAAAGGG+AGG | - | chr7.2:28901140-28901159 | None:intergenic | 30.0% | |
| AAGATAAGAATGTCACGTTA+TGG | + | chr7.2:28897086-28897105 | MS.gene27709:CDS | 30.0% | |
| AATGCTAAATTCAGTGATGA+TGG | + | chr7.2:28896905-28896924 | MS.gene27709:CDS | 30.0% | |
| AATTAAATCCCTTGGTTACA+GGG | - | chr7.2:28900161-28900180 | None:intergenic | 30.0% | |
| ACCTATAGTAGAAAAGATTG+GGG | + | chr7.2:28897353-28897372 | MS.gene27709:intron | 30.0% | |
| ACTTAAAACAAAGAAAGGGA+GGG | - | chr7.2:28901139-28901158 | None:intergenic | 30.0% | |
| AGAGAGAAAAAGAAAGATCA+TGG | - | chr7.2:28899232-28899251 | None:intergenic | 30.0% | |
| ATGAATCAGAAAACATGCTA+TGG | + | chr7.2:28900308-28900327 | MS.gene27709:intron | 30.0% | |
| ATTCTCAGAAGAATATCACA+AGG | + | chr7.2:28897140-28897159 | MS.gene27709:CDS | 30.0% | |
| CAATTGTTTATCTTTACCCA+TGG | + | chr7.2:28899986-28900005 | MS.gene27709:intron | 30.0% | |
| CACCTATAGTAGAAAAGATT+GGG | + | chr7.2:28897352-28897371 | MS.gene27709:intron | 30.0% | |
| CATCCAACGAATGAAAAATA+AGG | - | chr7.2:28899021-28899040 | None:intergenic | 30.0% | |
| CTGAACATATCACATAGAAA+AGG | - | chr7.2:28898664-28898683 | None:intergenic | 30.0% | |
| CTTGAAGATAAAAAACCATC+AGG | + | chr7.2:28900638-28900657 | MS.gene27709:CDS | 30.0% | |
| CTTTACGAAACAAGAAAAAG+AGG | + | chr7.2:28901225-28901244 | MS.gene27709:CDS | 30.0% | |
| GAAAAATCTTGATCCTTCAA+TGG | - | chr7.2:28900406-28900425 | None:intergenic | 30.0% | |
| GACAGTTAAAACATAAGTCA+TGG | - | chr7.2:28897900-28897919 | None:intergenic | 30.0% | |
| GAGAGAAAAAGAAAGATCAT+GGG | - | chr7.2:28899231-28899250 | None:intergenic | 30.0% | |
| GATGCTAAATACATACCAAT+TGG | - | chr7.2:28897167-28897186 | None:intergenic | 30.0% | |
| GATTTGTATTTGCAGTTGTT+AGG | + | chr7.2:28901086-28901105 | MS.gene27709:intron | 30.0% | |
| GCAAACATTTACTTCGTATA+AGG | + | chr7.2:28899769-28899788 | MS.gene27709:intron | 30.0% | |
| GGCATAACTAAAACATGTTA+AGG | - | chr7.2:28899052-28899071 | None:intergenic | 30.0% | |
| TAAAGTGATCTTGCGAAAAT+TGG | - | chr7.2:28898763-28898782 | None:intergenic | 30.0% | |
| TAAGTCTCCATAATTGTTGA+GGG | - | chr7.2:28898136-28898155 | None:intergenic | 30.0% | |
| TAGAAAAGATTGGGGAAAAT+AGG | + | chr7.2:28897361-28897380 | MS.gene27709:intron | 30.0% | |
| TAGATTTGATTGCAATCACT+TGG | + | chr7.2:28900182-28900201 | MS.gene27709:intron | 30.0% | |
| TGAATCAGAAAACATGCTAT+GGG | + | chr7.2:28900309-28900328 | MS.gene27709:intron | 30.0% | |
| TGATAAGACTAGACATGATA+GGG | + | chr7.2:28897326-28897345 | MS.gene27709:intron | 30.0% | |
| TTCCATCTAATAGTGTTGTA+AGG | - | chr7.2:28899133-28899152 | None:intergenic | 30.0% | |
| TTCTCAGAAGAATATCACAA+GGG | + | chr7.2:28897141-28897160 | MS.gene27709:CDS | 30.0% | |
| ! | ACCATGATTCCATTTAAGTT+GGG | - | chr7.2:28898351-28898370 | None:intergenic | 30.0% |
| ! | AGTAGTTCTACTCTTAATAG+TGG | + | chr7.2:28900972-28900991 | MS.gene27709:intron | 30.0% |
| ! | ATTGTGTGTAAACTTTTTGC+AGG | + | chr7.2:28900541-28900560 | MS.gene27709:intron | 30.0% |
| ! | GAAGATATTTTGTGCTTGAT+TGG | + | chr7.2:28899492-28899511 | MS.gene27709:intron | 30.0% |
| ! | TTTATCAGATTGATTCAGTG+CGG | + | chr7.2:28899579-28899598 | MS.gene27709:intron | 30.0% |
| ! | TTTCTAAAGGAGTTGTTTGT+CGG | + | chr7.2:28898021-28898040 | MS.gene27709:CDS | 30.0% |
| ! | TTTGATTGTTATTCGAAAGC+AGG | + | chr7.2:28898717-28898736 | MS.gene27709:intron | 30.0% |
| !! | AAAAATACTGCTCAAGTTGA+AGG | + | chr7.2:28897194-28897213 | MS.gene27709:intron | 30.0% |
| !! | AAAATACTGCTCAAGTTGAA+GGG | + | chr7.2:28897195-28897214 | MS.gene27709:intron | 30.0% |
| !!! | ATTCTGTTTTGAAATGCCAA+TGG | + | chr7.2:28901173-28901192 | MS.gene27709:intron | 30.0% |
| !!! | GAAGGGATAATTTTTAAGAC+CGG | + | chr7.2:28897212-28897231 | MS.gene27709:intron | 30.0% |
| !!! | TATTTTGGGATTACGTAGAA+AGG | + | chr7.2:28899824-28899843 | MS.gene27709:CDS | 30.0% |
| AAAACAGAAGCGACAAGATT+AGG | - | chr7.2:28897016-28897035 | None:intergenic | 35.0% | |
| AAAATAGGCTTAGGTGGTTT+GGG | + | chr7.2:28897376-28897395 | MS.gene27709:intron | 35.0% | |
| AAAATTCCATGAACCGTTGT+AGG | + | chr7.2:28898235-28898254 | MS.gene27709:intron | 35.0% | |
| AAACATTCCAAAAACCTTCC+GGG | + | chr7.2:28897059-28897078 | MS.gene27709:CDS | 35.0% | |
| AAATATTTGGCAGGGAAAGA+GGG | + | chr7.2:28898575-28898594 | MS.gene27709:intron | 35.0% | |
| AAATGGAATCATGGTTCAAC+TGG | + | chr7.2:28898356-28898375 | MS.gene27709:CDS | 35.0% | |
| AAATTCCATGAACCGTTGTA+GGG | + | chr7.2:28898236-28898255 | MS.gene27709:intron | 35.0% | |
| AACATAAAACTGCACAGTCA+AGG | - | chr7.2:28899383-28899402 | None:intergenic | 35.0% | |
| AACGTGACATTCTTATCTTG+CGG | - | chr7.2:28897085-28897104 | None:intergenic | 35.0% | |
| AAGTCTCCATAATTGTTGAG+GGG | - | chr7.2:28898135-28898154 | None:intergenic | 35.0% | |
| ACATAAAACTGCACAGTCAA+GGG | - | chr7.2:28899382-28899401 | None:intergenic | 35.0% | |
| ACCCAACTTAAATGGAATCA+TGG | + | chr7.2:28898347-28898366 | MS.gene27709:CDS | 35.0% | |
| ACCTAAATAACAGCATACCA+AGG | - | chr7.2:28898204-28898223 | None:intergenic | 35.0% | |
| ACTATTAGATGGAACCCAAA+AGG | + | chr7.2:28899139-28899158 | MS.gene27709:CDS | 35.0% | |
| ACTTCAGCAATAAGTTTGCA+TGG | + | chr7.2:28900927-28900946 | MS.gene27709:intron | 35.0% | |
| AGTAAGAAGAGTAAGATCAG+AGG | + | chr7.2:28897428-28897447 | MS.gene27709:intron | 35.0% | |
| AGTATCTTCCCTAGAATTCT+TGG | + | chr7.2:28901023-28901042 | MS.gene27709:intron | 35.0% | |
| AGTGTACAGTTATTTGCTTG+TGG | + | chr7.2:28898269-28898288 | MS.gene27709:CDS | 35.0% | |
| ATTCAATGACATCTGCGAAA+AGG | - | chr7.2:28900523-28900542 | None:intergenic | 35.0% | |
| CAAACATTCCAAAAACCTTC+CGG | + | chr7.2:28897058-28897077 | MS.gene27709:CDS | 35.0% | |
| CAAACTCATCCAAGAATTCT+AGG | - | chr7.2:28901035-28901054 | None:intergenic | 35.0% | |
| CACTTATCTTATTCCTGTGT+TGG | - | chr7.2:28897275-28897294 | None:intergenic | 35.0% | |
| CAGGAATAAGATAAGTGTAG+CGG | + | chr7.2:28897278-28897297 | MS.gene27709:intron | 35.0% | |
| CATCTCTTGAGATATTAGGT+AGG | + | chr7.2:28896708-28896727 | MS.gene27709:CDS | 35.0% | |
| CTAAGTCTCCATAATTGTTG+AGG | - | chr7.2:28898137-28898156 | None:intergenic | 35.0% | |
| CTACCTAATATCTCAAGAGA+TGG | - | chr7.2:28896710-28896729 | None:intergenic | 35.0% | |
| CTATTAGATGGAACCCAAAA+GGG | + | chr7.2:28899140-28899159 | MS.gene27709:CDS | 35.0% | |
| GAATTGGTACTATTGTTCCT+TGG | + | chr7.2:28898184-28898203 | MS.gene27709:intron | 35.0% | |
| GATGTTTGACAAGTTATACC+AGG | + | chr7.2:28900454-28900473 | MS.gene27709:CDS | 35.0% | |
| GCACCTATAGTAGAAAAGAT+TGG | + | chr7.2:28897351-28897370 | MS.gene27709:intron | 35.0% | |
| GTAACACTACTAAAGAGACT+AGG | + | chr7.2:28896978-28896997 | MS.gene27709:CDS | 35.0% | |
| GTAAGAAGAGTAAGATCAGA+GGG | + | chr7.2:28897429-28897448 | MS.gene27709:intron | 35.0% | |
| GTCCTTACAACACTATTAGA+TGG | + | chr7.2:28899128-28899147 | MS.gene27709:CDS | 35.0% | |
| GTGATAAGACTAGACATGAT+AGG | + | chr7.2:28897325-28897344 | MS.gene27709:intron | 35.0% | |
| TAAATATTTGGCAGGGAAAG+AGG | + | chr7.2:28898574-28898593 | MS.gene27709:intron | 35.0% | |
| TATACTACCTGACAACAGAT+GGG | + | chr7.2:28898444-28898463 | MS.gene27709:CDS | 35.0% | |
| TATCGCTGGATAATGTTTGT+TGG | + | chr7.2:28900128-28900147 | MS.gene27709:intron | 35.0% | |
| TCACCATCTCTTGAGATATT+AGG | + | chr7.2:28896704-28896723 | MS.gene27709:CDS | 35.0% | |
| TCAGAACTGAATTGAATTGC+CGG | - | chr7.2:28897942-28897961 | None:intergenic | 35.0% | |
| TCGAAGATTTGTCAAGGAAA+CGG | + | chr7.2:28897786-28897805 | MS.gene27709:intron | 35.0% | |
| TGACCAAACAAACAAGGAAT+TGG | + | chr7.2:28898168-28898187 | MS.gene27709:intron | 35.0% | |
| TGTCAATGTATCTGTTGTTC+AGG | + | chr7.2:28897916-28897935 | MS.gene27709:intron | 35.0% | |
| TGTTGTATGGAACAAAGTGT+TGG | + | chr7.2:28897238-28897257 | MS.gene27709:intron | 35.0% | |
| TTAGTGGGATAAAACTTGGT+TGG | + | chr7.2:28897607-28897626 | MS.gene27709:intron | 35.0% | |
| TTATACTACCTGACAACAGA+TGG | + | chr7.2:28898443-28898462 | MS.gene27709:CDS | 35.0% | |
| TTATGTTGAGCAAATATCGC+TGG | + | chr7.2:28900114-28900133 | MS.gene27709:intron | 35.0% | |
| TTATTCGAAAGCAGGACTTA+TGG | + | chr7.2:28898725-28898744 | MS.gene27709:intron | 35.0% | |
| TTCAACTGGACTTCTAATTG+TGG | + | chr7.2:28898370-28898389 | MS.gene27709:CDS | 35.0% | |
| TTTGTTCCATACAACATCTC+CGG | - | chr7.2:28897234-28897253 | None:intergenic | 35.0% | |
| ! | AACAAAATCAAAGTGCCCAT+GGG | - | chr7.2:28900005-28900024 | None:intergenic | 35.0% |
| ! | CTTTGAAAATAACAGTAGGC+TGG | + | chr7.2:28898822-28898841 | MS.gene27709:intron | 35.0% |
| ! | GACACTGGGAATTTTTCTAA+AGG | + | chr7.2:28898008-28898027 | MS.gene27709:CDS | 35.0% |
| ! | GTACCAATTCCTTGTTTGTT+TGG | - | chr7.2:28898174-28898193 | None:intergenic | 35.0% |
| ! | GTTGTATGGAACAAAGTGTT+GGG | + | chr7.2:28897239-28897258 | MS.gene27709:intron | 35.0% |
| ! | TAAACTTTTTGCAGGCTGAT+TGG | + | chr7.2:28900549-28900568 | MS.gene27709:intron | 35.0% |
| ! | TCCCCAATCTTTTCTACTAT+AGG | - | chr7.2:28897357-28897376 | None:intergenic | 35.0% |
| ! | TCCTTGGTATGCTGTTATTT+AGG | + | chr7.2:28898200-28898219 | MS.gene27709:intron | 35.0% |
| ! | TGAGGATACATTTCCCTTTT+GGG | - | chr7.2:28899156-28899175 | None:intergenic | 35.0% |
| ! | TGCTATGGGAGAATATTTTG+CGG | + | chr7.2:28900323-28900342 | MS.gene27709:intron | 35.0% |
| ! | TTATCAGATTGATTCAGTGC+GGG | + | chr7.2:28899580-28899599 | MS.gene27709:intron | 35.0% |
| ! | TTTTCGTGACCAAACAAACA+AGG | + | chr7.2:28898162-28898181 | MS.gene27709:intron | 35.0% |
| !! | CAAGGCTTCAAGTTGATAAT+GGG | + | chr7.2:28899935-28899954 | MS.gene27709:CDS | 35.0% |
| !! | GATATTTTCTGAAGATGGCT+TGG | + | chr7.2:28898694-28898713 | MS.gene27709:intron | 35.0% |
| !! | TAGAGTTTGCTGTTGTGTAT+GGG | + | chr7.2:28898633-28898652 | MS.gene27709:CDS | 35.0% |
| !! | TGACTGTGCAGTTTTATGTT+TGG | + | chr7.2:28899383-28899402 | MS.gene27709:intron | 35.0% |
| !! | TGATGATGGATCTTTGCTTA+TGG | + | chr7.2:28896919-28896938 | MS.gene27709:CDS | 35.0% |
| !! | TTAGAGTTTGCTGTTGTGTA+TGG | + | chr7.2:28898632-28898651 | MS.gene27709:CDS | 35.0% |
| !!! | GTAGAAACTTGGGTTAGTTT+TGG | - | chr7.2:28900760-28900779 | None:intergenic | 35.0% |
| AAACAAAGAAAGGGAGGGAA+AGG | - | chr7.2:28901134-28901153 | None:intergenic | 40.0% | |
| AAATCTAAGAAGGACCCTTG+AGG | + | chr7.2:28899259-28899278 | MS.gene27709:intron | 40.0% | |
| AAGCATGGTAAAGAACCTGA+TGG | - | chr7.2:28900656-28900675 | None:intergenic | 40.0% | |
| AATATTTGGCAGGGAAAGAG+GGG | + | chr7.2:28898576-28898595 | MS.gene27709:intron | 40.0% | |
| AATCTAAGAAGGACCCTTGA+GGG | + | chr7.2:28899260-28899279 | MS.gene27709:intron | 40.0% | |
| AATGGTCTGTGTCAAGTGAA+TGG | + | chr7.2:28899872-28899891 | MS.gene27709:CDS | 40.0% | |
| AATGTATCTGTTGTTCAGGC+CGG | + | chr7.2:28897920-28897939 | MS.gene27709:intron | 40.0% | |
| AATTCCATGAACCGTTGTAG+GGG | + | chr7.2:28898237-28898256 | MS.gene27709:intron | 40.0% | |
| ACGTTATGGAAGATTCAGAC+TGG | + | chr7.2:28897100-28897119 | MS.gene27709:CDS | 40.0% | |
| AGAATATCACAAGGGCCAAT+TGG | + | chr7.2:28897149-28897168 | MS.gene27709:CDS | 40.0% | |
| AGATTGGGGAAAATAGGCTT+AGG | + | chr7.2:28897367-28897386 | MS.gene27709:intron | 40.0% | |
| AGGGAATATCTAGTCCAGTT+GGG | - | chr7.2:28898919-28898938 | None:intergenic | 40.0% | |
| AGGTGAAATAGAAAGCTCAG+CGG | - | chr7.2:28898069-28898088 | None:intergenic | 40.0% | |
| ATACTACCTGACAACAGATG+GGG | + | chr7.2:28898445-28898464 | MS.gene27709:CDS | 40.0% | |
| ATATCTCAAGAGATGGTGAG+TGG | - | chr7.2:28896703-28896722 | None:intergenic | 40.0% | |
| ATTGGCTAAACTAGGACTAC+TGG | + | chr7.2:28899510-28899529 | MS.gene27709:intron | 40.0% | |
| CCACTTAGTGGGATAAAACT+TGG | + | chr7.2:28897603-28897622 | MS.gene27709:intron | 40.0% | |
| CCATTATCAACTTGAAGCCT+TGG | - | chr7.2:28899937-28899956 | None:intergenic | 40.0% | |
| CTTGACCTGCAAAAAGTTCA+CGG | - | chr7.2:28900735-28900754 | None:intergenic | 40.0% | |
| GAAAAAGAGGGAGAAACAGA+AGG | + | chr7.2:28901238-28901257 | MS.gene27709:CDS | 40.0% | |
| GAAAATAGGCTTAGGTGGTT+TGG | + | chr7.2:28897375-28897394 | MS.gene27709:intron | 40.0% | |
| GCAAATAACTGTACACTAGC+AGG | - | chr7.2:28898266-28898285 | None:intergenic | 40.0% | |
| GGAGAAACAGAAGGAGAAAA+AGG | + | chr7.2:28901247-28901266 | MS.gene27709:CDS | 40.0% | |
| GTGATGTCACCAAACTTACT+TGG | - | chr7.2:28900587-28900606 | None:intergenic | 40.0% | |
| GTTCGACAACCCAACTTAAA+TGG | + | chr7.2:28898339-28898358 | MS.gene27709:CDS | 40.0% | |
| TCATGTAGCTGCATTTGTTC+CGG | + | chr7.2:28898094-28898113 | MS.gene27709:CDS | 40.0% | |
| TGTATCCTCAGCTGATGATT+TGG | + | chr7.2:28899166-28899185 | MS.gene27709:intron | 40.0% | |
| TTAAGACCGGAGATGTTGTA+TGG | + | chr7.2:28897225-28897244 | MS.gene27709:intron | 40.0% | |
| TTTGTGCCCCTCAACAATTA+TGG | + | chr7.2:28898126-28898145 | MS.gene27709:intron | 40.0% | |
| ! | AAGAGGCTTTGGTAGAAACT+TGG | - | chr7.2:28900771-28900790 | None:intergenic | 40.0% |
| ! | AGAGGCTTTGGTAGAAACTT+GGG | - | chr7.2:28900770-28900789 | None:intergenic | 40.0% |
| ! | AGTTTGAGATACTACTGACC+TGG | - | chr7.2:28900475-28900494 | None:intergenic | 40.0% |
| ! | ATGGGAGAATATTTTGCGGA+TGG | + | chr7.2:28900327-28900346 | MS.gene27709:intron | 40.0% |
| ! | CAACAAAATCAAAGTGCCCA+TGG | - | chr7.2:28900006-28900025 | None:intergenic | 40.0% |
| ! | CAAGGATTGGAACTTTGAAG+AGG | + | chr7.2:28899290-28899309 | MS.gene27709:intron | 40.0% |
| ! | CTGAGGATACATTTCCCTTT+TGG | - | chr7.2:28899157-28899176 | None:intergenic | 40.0% |
| ! | GAATACCGTGAACTTTTTGC+AGG | + | chr7.2:28900727-28900746 | MS.gene27709:intron | 40.0% |
| ! | GATGTTTTCTCAAACCAACC+AGG | + | chr7.2:28897853-28897872 | MS.gene27709:intron | 40.0% |
| ! | TAAAACTTGGTTGGTTGTCG+TGG | + | chr7.2:28897616-28897635 | MS.gene27709:intron | 40.0% |
| ! | TAAGTTGGGTTGTCGAACAT+CGG | - | chr7.2:28898337-28898356 | None:intergenic | 40.0% |
| ! | TCAAACAGAGTTGCTTTAGC+AGG | - | chr7.2:28899073-28899092 | None:intergenic | 40.0% |
| ! | TGATGGATCTTTGCTTATGG+TGG | + | chr7.2:28896922-28896941 | MS.gene27709:CDS | 40.0% |
| ! | TGTGCTTGATTGGCTAAACT+AGG | + | chr7.2:28899502-28899521 | MS.gene27709:intron | 40.0% |
| !! | AGGTGCAATTTTTCGACACT+GGG | + | chr7.2:28897994-28898013 | MS.gene27709:CDS | 40.0% |
| !! | CCAAGGCTTCAAGTTGATAA+TGG | + | chr7.2:28899934-28899953 | MS.gene27709:CDS | 40.0% |
| !! | CCAAGTTTTATCCCACTAAG+TGG | - | chr7.2:28897606-28897625 | None:intergenic | 40.0% |
| !! | TAAGTCATGGTGAGAGTGTT+AGG | - | chr7.2:28897887-28897906 | None:intergenic | 40.0% |
| !! | TGTGCAGTTTTATGTTTGGC+TGG | + | chr7.2:28899387-28899406 | MS.gene27709:intron | 40.0% |
| !!! | GTGCTTCTGTTTTAGTTCGA+CGG | + | chr7.2:28896801-28896820 | MS.gene27709:CDS | 40.0% |
| !!! | GTTTTATGTTTGGCTGGCTT+TGG | + | chr7.2:28899393-28899412 | MS.gene27709:intron | 40.0% |
| AAGCCATAACGATACCCAAC+TGG | + | chr7.2:28898902-28898921 | MS.gene27709:intron | 45.0% | |
| AATGCAGCTACATGAGAAGC+AGG | - | chr7.2:28898089-28898108 | None:intergenic | 45.0% | |
| AGAAGAGTAAGATCAGAGGG+AGG | + | chr7.2:28897432-28897451 | MS.gene27709:intron | 45.0% | |
| ATTCCATGAACCGTTGTAGG+GGG | + | chr7.2:28898238-28898257 | MS.gene27709:intron | 45.0% | |
| CAAGTGAATGGTCTCCAGAT+GGG | + | chr7.2:28899884-28899903 | MS.gene27709:CDS | 45.0% | |
| CAGGGAATATCTAGTCCAGT+TGG | - | chr7.2:28898920-28898939 | None:intergenic | 45.0% | |
| CCAGAGTCACCAAGTAAGTT+TGG | + | chr7.2:28900575-28900594 | MS.gene27709:CDS | 45.0% | |
| GAAACAGCTTGCATCAACCA+AGG | + | chr7.2:28899846-28899865 | MS.gene27709:CDS | 45.0% | |
| GAAGAATGCTCACTATGGAC+CGG | + | chr7.2:28896827-28896846 | MS.gene27709:CDS | 45.0% | |
| GAATGCCAAATCATCAGCTG+AGG | - | chr7.2:28899174-28899193 | None:intergenic | 45.0% | |
| GACCATTGAGCGTCATGAAT+AGG | - | chr7.2:28898602-28898621 | None:intergenic | 45.0% | |
| GACGCTCAATGGTCAAATTC+AGG | + | chr7.2:28898608-28898627 | MS.gene27709:CDS | 45.0% | |
| GAGGATAGTCGTATCACTAG+AGG | + | chr7.2:28897451-28897470 | MS.gene27709:intron | 45.0% | |
| GGAGAACATACCATATCACC+AGG | - | chr7.2:28899426-28899445 | None:intergenic | 45.0% | |
| GTCATGAAATAGCACCCATC+TGG | - | chr7.2:28899901-28899920 | None:intergenic | 45.0% | |
| GTCCATAGTGAGCATTCTTC+CGG | - | chr7.2:28896827-28896846 | None:intergenic | 45.0% | |
| GTTTGCAAATAAGTTCCGCG+AGG | - | chr7.2:28897043-28897062 | None:intergenic | 45.0% | |
| TAAGACTGCAGCTGCTATTC+AGG | + | chr7.2:28900840-28900859 | MS.gene27709:CDS | 45.0% | |
| TCAAGTGAATGGTCTCCAGA+TGG | + | chr7.2:28899883-28899902 | MS.gene27709:CDS | 45.0% | |
| TGCATTTGTTCCGGAATCCA+AGG | + | chr7.2:28898103-28898122 | MS.gene27709:CDS | 45.0% | |
| TGCTTCCCAAAGTCAACCTT+TGG | + | chr7.2:28898295-28898314 | MS.gene27709:CDS | 45.0% | |
| TTGCATCAACCAAGGCTGAA+TGG | + | chr7.2:28899854-28899873 | MS.gene27709:CDS | 45.0% | |
| TTGGGGAAAATAGGCTTAGG+TGG | + | chr7.2:28897370-28897389 | MS.gene27709:intron | 45.0% | |
| TTTATCCCACTAAGTGGCGT+CGG | - | chr7.2:28897600-28897619 | None:intergenic | 45.0% | |
| ! | AAAGTCAACCTTTGGCTCGA+CGG | + | chr7.2:28898303-28898322 | MS.gene27709:CDS | 45.0% |
| ! | AGATAAGTGTAGCGGAGATG+AGG | + | chr7.2:28897286-28897305 | MS.gene27709:intron | 45.0% |
| ! | AGGTTTTTGTGCAGTTGGGT+TGG | - | chr7.2:28900797-28900816 | None:intergenic | 45.0% |
| ! | AGTCCAGTTGGGTATCGTTA+TGG | - | chr7.2:28898908-28898927 | None:intergenic | 45.0% |
| ! | CAGCAGGTTTTTGTGCAGTT+GGG | - | chr7.2:28900801-28900820 | None:intergenic | 45.0% |
| ! | CCAAACTTACTTGGTGACTC+TGG | - | chr7.2:28900578-28900597 | None:intergenic | 45.0% |
| ! | CGTGAACTTTTTGCAGGTCA+AGG | + | chr7.2:28900733-28900752 | MS.gene27709:intron | 45.0% |
| ! | GCTTTTCTCCCTGTAACCAA+GGG | + | chr7.2:28900150-28900169 | MS.gene27709:intron | 45.0% |
| ! | GTTTGTCGGTTAAGAGTTCC+AGG | + | chr7.2:28898035-28898054 | MS.gene27709:CDS | 45.0% |
| ! | TCGAGCCAAAGGTTGACTTT+GGG | - | chr7.2:28898303-28898322 | None:intergenic | 45.0% |
| ! | TGGTAACTTGCCTGGTGATA+TGG | + | chr7.2:28899413-28899432 | MS.gene27709:CDS | 45.0% |
| !! | GAGGTGCAATTTTTCGACAC+TGG | + | chr7.2:28897993-28898012 | MS.gene27709:CDS | 45.0% |
| !! | TGGTGAGAGTGTTAGGACTT+CGG | - | chr7.2:28897880-28897899 | None:intergenic | 45.0% |
| !!! | TTCTGTTTTAGTTCGACGGC+CGG | + | chr7.2:28896805-28896824 | MS.gene27709:CDS | 45.0% |
| AAAAAGCTCCGTCGAGCCAA+AGG | - | chr7.2:28898314-28898333 | None:intergenic | 50.0% | |
| AACTTGAAGCCTTGGAGCTG+TGG | - | chr7.2:28899929-28899948 | None:intergenic | 50.0% | |
| ACAACAGATGGGGTGCATGA+AGG | + | chr7.2:28898455-28898474 | MS.gene27709:CDS | 50.0% | |
| AGAAGGACCCTTGAGGGTTA+TGG | + | chr7.2:28899266-28899285 | MS.gene27709:intron | 50.0% | |
| AGTCGTATCACTAGAGGCTG+AGG | + | chr7.2:28897457-28897476 | MS.gene27709:intron | 50.0% | |
| ATCCTTGCCCATAACCCTCA+AGG | - | chr7.2:28899277-28899296 | None:intergenic | 50.0% | |
| ATGTCGCGTGCCAACTAATG+AGG | + | chr7.2:28897974-28897993 | MS.gene27709:CDS | 50.0% | |
| CGGAGATGAGGATGTTGTGT+TGG | + | chr7.2:28897298-28897317 | MS.gene27709:intron | 50.0% | |
| GAAGGACCCTTGAGGGTTAT+GGG | + | chr7.2:28899267-28899286 | MS.gene27709:intron | 50.0% | |
| GACATTCTTATCTTGCGGCC+CGG | - | chr7.2:28897080-28897099 | None:intergenic | 50.0% | |
| GCAGTTGTTAGGAGAGAGCT+CGG | + | chr7.2:28901097-28901116 | MS.gene27709:intron | 50.0% | |
| GGCCTATTCATGACGCTCAA+TGG | + | chr7.2:28898597-28898616 | MS.gene27709:CDS | 50.0% | |
| TCCTTGCCCATAACCCTCAA+GGG | - | chr7.2:28899276-28899295 | None:intergenic | 50.0% | |
| TGACACAGACCATTCAGCCT+TGG | - | chr7.2:28899866-28899885 | None:intergenic | 50.0% | |
| TGAGGGTTATGGGCAAGGAT+TGG | + | chr7.2:28899277-28899296 | MS.gene27709:intron | 50.0% | |
| TGATATTCGGCTGACCGTTC+TGG | - | chr7.2:28896862-28896881 | None:intergenic | 50.0% | |
| ! | CAAGAAGTGCAGACCTCTAC+TGG | + | chr7.2:28899093-28899112 | MS.gene27709:CDS | 50.0% |
| ! | GCAGCAGGTTTTTGTGCAGT+TGG | - | chr7.2:28900802-28900821 | None:intergenic | 50.0% |
| ! | GGCTTTTCTCCCTGTAACCA+AGG | + | chr7.2:28900149-28900168 | MS.gene27709:intron | 50.0% |
| ! | GTCGAGCCAAAGGTTGACTT+TGG | - | chr7.2:28898304-28898323 | None:intergenic | 50.0% |
| ! | TTGTTGAGGGGCACAAACCT+TGG | - | chr7.2:28898123-28898142 | None:intergenic | 50.0% |
| ACCCTTGAGGGTTATGGGCA+AGG | + | chr7.2:28899272-28899291 | MS.gene27709:intron | 55.0% | |
| ATGTAGCCGACGCCACTTAG+TGG | + | chr7.2:28897591-28897610 | MS.gene27709:intron | 55.0% | |
| CATGCACCCCATCTGTTGTC+AGG | - | chr7.2:28898454-28898473 | None:intergenic | 55.0% | |
| CCAGTTCCAAGCTCCAGTAG+AGG | - | chr7.2:28899109-28899128 | None:intergenic | 55.0% | |
| CCTCTACTGGAGCTTGGAAC+TGG | + | chr7.2:28899106-28899125 | MS.gene27709:CDS | 55.0% | |
| CTAGCAGGAACCCCCTACAA+CGG | - | chr7.2:28898251-28898270 | None:intergenic | 55.0% | |
| GAACCCCCTACAACGGTTCA+TGG | - | chr7.2:28898244-28898263 | None:intergenic | 55.0% | |
| GAGTGTTAGGACTTCGGACC+TGG | - | chr7.2:28897874-28897893 | None:intergenic | 55.0% | |
| GCAGCTGCAGTCTTAGCATG+TGG | - | chr7.2:28900835-28900854 | None:intergenic | 55.0% | |
| GCTGCAGTCTTAGCATGTGG+TGG | - | chr7.2:28900832-28900851 | None:intergenic | 55.0% | |
| GGCCGGAAGAATGCTCACTA+TGG | + | chr7.2:28896822-28896841 | MS.gene27709:CDS | 55.0% | |
| GGGCAGTGAAGAACCAACAC+AGG | + | chr7.2:28897259-28897278 | MS.gene27709:intron | 55.0% | |
| GGGGCACAAACCTTGGATTC+CGG | - | chr7.2:28898116-28898135 | None:intergenic | 55.0% | |
| GTTAGGACTTCGGACCTGGT+TGG | - | chr7.2:28897870-28897889 | None:intergenic | 55.0% | |
| TGACAGCAACCACAGCTCCA+AGG | + | chr7.2:28899917-28899936 | MS.gene27709:CDS | 55.0% | |
| TGCAGACCTCTACTGGAGCT+TGG | + | chr7.2:28899100-28899119 | MS.gene27709:CDS | 55.0% | |
| TGCAGCTGCTATTCAGGCAG+AGG | + | chr7.2:28900846-28900865 | MS.gene27709:CDS | 55.0% | |
| TGTAGCCGACGCCACTTAGT+GGG | + | chr7.2:28897592-28897611 | MS.gene27709:intron | 55.0% | |
| TTCTTATCTTGCGGCCCGGA+AGG | - | chr7.2:28897076-28897095 | None:intergenic | 55.0% | |
| ! | GCTTCTGTTTTGTCGCCTCG+CGG | + | chr7.2:28897025-28897044 | MS.gene27709:CDS | 55.0% |
| !! | ACTAAGTGGCGTCGGCTACA+TGG | - | chr7.2:28897592-28897611 | None:intergenic | 55.0% |
| !! | GCTGACCGTTCTGGAATGGA+GGG | - | chr7.2:28896853-28896872 | None:intergenic | 55.0% |
| !! | GCTGGCTTTGGTAACTTGCC+TGG | + | chr7.2:28899405-28899424 | MS.gene27709:CDS | 55.0% |
| !! | TGCAGTTGGGTTGGCAGAAG+AGG | - | chr7.2:28900788-28900807 | None:intergenic | 55.0% |
| !! | TGGGTTGGCAGAAGAGGCTT+TGG | - | chr7.2:28900782-28900801 | None:intergenic | 55.0% |
| !! | TGTGGTGGACGATATGCAGC+AGG | - | chr7.2:28900817-28900836 | None:intergenic | 55.0% |
| !! | TTCGGCTGACCGTTCTGGAA+TGG | - | chr7.2:28896857-28896876 | None:intergenic | 55.0% |
| ACCGGCCCTCCATTCCAGAA+CGG | + | chr7.2:28896845-28896864 | MS.gene27709:CDS | 60.0% | |
| AGCTCAGCGGAAGCAACTCC+TGG | - | chr7.2:28898056-28898075 | None:intergenic | 60.0% | |
| ! | CTTGCGGCCCGGAAGGTTTT+TGG | - | chr7.2:28897069-28897088 | None:intergenic | 60.0% |
| !! | ACCGTTCTGGAATGGAGGGC+CGG | - | chr7.2:28896849-28896868 | None:intergenic | 60.0% |
| !! | GGCTGACCGTTCTGGAATGG+AGG | - | chr7.2:28896854-28896873 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 28896686 | 28901292 | 28896686 | ID=MS.gene27709 |
| chr7.2 | mRNA | 28896686 | 28901292 | 28896686 | ID=MS.gene27709.t1;Parent=MS.gene27709 |
| chr7.2 | exon | 28896686 | 28897170 | 28896686 | ID=MS.gene27709.t1.exon1;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28896686 | 28897170 | 28896686 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28897938 | 28898124 | 28897938 | ID=MS.gene27709.t1.exon2;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28897938 | 28898124 | 28897938 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28898257 | 28898491 | 28898257 | ID=MS.gene27709.t1.exon3;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28898257 | 28898491 | 28898257 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28898588 | 28898656 | 28898588 | ID=MS.gene27709.t1.exon4;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28898588 | 28898656 | 28898588 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28899065 | 28899166 | 28899065 | ID=MS.gene27709.t1.exon5;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28899065 | 28899166 | 28899065 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28899394 | 28899434 | 28899394 | ID=MS.gene27709.t1.exon6;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28899394 | 28899434 | 28899394 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28899823 | 28899956 | 28899823 | ID=MS.gene27709.t1.exon7;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28899823 | 28899956 | 28899823 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28900412 | 28900475 | 28900412 | ID=MS.gene27709.t1.exon8;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28900412 | 28900475 | 28900412 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28900563 | 28900659 | 28900563 | ID=MS.gene27709.t1.exon9;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28900563 | 28900659 | 28900563 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28900749 | 28900867 | 28900749 | ID=MS.gene27709.t1.exon10;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28900749 | 28900867 | 28900749 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28901101 | 28901123 | 28901101 | ID=MS.gene27709.t1.exon11;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28901101 | 28901123 | 28901101 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| chr7.2 | exon | 28901208 | 28901292 | 28901208 | ID=MS.gene27709.t1.exon12;Parent=MS.gene27709.t1 |
| chr7.2 | CDS | 28901208 | 28901292 | 28901208 | ID=cds.MS.gene27709.t1;Parent=MS.gene27709.t1 |
| Gene Sequence |
| Protein sequence |
