Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47513.t1 | AFK44469.1 | 98.5 | 481 | 7 | 0 | 33 | 513 | 9 | 489 | 8.30E-281 | 975.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47513.t1 | O74965 | 35.9 | 437 | 254 | 7 | 68 | 497 | 39 | 456 | 1.1e-76 | 288.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47513.t1 | I3SW27 | 98.5 | 481 | 7 | 0 | 33 | 513 | 9 | 489 | 6.0e-281 | 975.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40016 | MS.gene47513 | PPI |
| MS.gene01984 | MS.gene47513 | PPI |
| MS.gene023135 | MS.gene47513 | PPI |
| MS.gene47513 | MS.gene028318 | PPI |
| MS.gene47513 | MS.gene83444 | PPI |
| MS.gene47513 | MS.gene35140 | PPI |
| MS.gene82426 | MS.gene47513 | PPI |
| MS.gene93131 | MS.gene47513 | PPI |
| MS.gene028153 | MS.gene47513 | PPI |
| MS.gene004699 | MS.gene47513 | PPI |
| MS.gene47513 | MS.gene037362 | PPI |
| MS.gene36472 | MS.gene47513 | PPI |
| MS.gene32083 | MS.gene47513 | PPI |
| MS.gene47513 | MS.gene58159 | PPI |
| MS.gene47513 | MS.gene048301 | PPI |
| MS.gene036254 | MS.gene47513 | PPI |
| MS.gene47513 | MS.gene70303 | PPI |
| MS.gene47513 | MS.gene72768 | PPI |
| MS.gene57305 | MS.gene47513 | PPI |
| MS.gene47513 | MS.gene003175 | PPI |
| MS.gene02854 | MS.gene47513 | PPI |
| MS.gene030823 | MS.gene47513 | PPI |
| MS.gene030707 | MS.gene47513 | PPI |
| MS.gene28161 | MS.gene47513 | PPI |
| MS.gene47513 | MS.gene029211 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47513.t1 | MTR_4g087280 | 98.545 | 481 | 7 | 0 | 33 | 513 | 9 | 489 | 0.0 | 993 |
| MS.gene47513.t1 | MTR_4g087280 | 98.312 | 474 | 8 | 0 | 33 | 506 | 9 | 482 | 0.0 | 976 |
| MS.gene47513.t1 | MTR_5g091610 | 69.892 | 93 | 16 | 2 | 362 | 454 | 126 | 206 | 2.44e-35 | 133 |
| MS.gene47513.t1 | MTR_3g105430 | 24.000 | 400 | 265 | 14 | 75 | 444 | 224 | 614 | 1.67e-21 | 98.6 |
| MS.gene47513.t1 | MTR_2g088350 | 94.872 | 39 | 2 | 0 | 427 | 465 | 1 | 39 | 3.29e-17 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47513.t1 | AT1G73180 | 68.058 | 479 | 149 | 1 | 33 | 511 | 6 | 480 | 0.0 | 711 |
| MS.gene47513.t1 | AT1G73180 | 67.932 | 474 | 148 | 1 | 33 | 506 | 6 | 475 | 0.0 | 705 |
| MS.gene47513.t1 | AT5G27640 | 23.367 | 398 | 267 | 13 | 75 | 442 | 221 | 610 | 2.16e-22 | 101 |
| MS.gene47513.t1 | AT5G27640 | 23.367 | 398 | 267 | 13 | 75 | 442 | 221 | 610 | 2.16e-22 | 101 |
| MS.gene47513.t1 | AT5G27640 | 23.618 | 398 | 266 | 13 | 75 | 442 | 247 | 636 | 2.19e-22 | 101 |
| MS.gene47513.t1 | AT5G25780 | 23.250 | 400 | 268 | 14 | 75 | 444 | 222 | 612 | 4.19e-21 | 97.4 |
Find 104 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGGATACATTTCCCTTT+TGG | 0.184033 | 4.3:-25863844 | None:intergenic |
| GTTCTACAACCCAACTTAAA+TGG | 0.213890 | 4.3:+25862960 | MS.gene47513:CDS |
| CCAGAGTCACCAAGTAAATT+TGG | 0.263110 | 4.3:+25865252 | MS.gene47513:CDS |
| GGCCGGAAGAATGCTCATTA+TGG | 0.281888 | 4.3:+25861489 | MS.gene47513:CDS |
| TAAGACTGCAGCTGCTATTC+AGG | 0.307860 | 4.3:+25865517 | MS.gene47513:CDS |
| GGAGCACAGACCTTGGATTC+TGG | 0.314496 | 4.3:-25862732 | None:intergenic |
| CGGTAACTTGCCTGGTGATA+TGG | 0.317446 | 4.3:+25864096 | MS.gene47513:CDS |
| ATGGCATCTCTTGAGATATT+AGG | 0.332064 | 4.3:+25861379 | MS.gene47513:CDS |
| GTCGAGCCATAGGTTGAGTT+TGG | 0.333097 | 4.3:-25862922 | None:intergenic |
| TGATGTTTGGTTGACCGTTC+TGG | 0.335473 | 4.3:-25861526 | None:intergenic |
| AGCTCAGCGGAAGCAACTCC+TGG | 0.358438 | 4.3:-25862672 | None:intergenic |
| CAGTTCAGTATTCTCTCTAA+TGG | 0.359665 | 4.3:+25861360 | MS.gene47513:intron |
| TTAGAGTTTGCTGTTGTGTA+TGG | 0.359900 | 4.3:+25863253 | MS.gene47513:CDS |
| AAAACAAATCAGAGTTACTA+TGG | 0.360928 | 4.3:+25863031 | MS.gene47513:CDS |
| GTAGTGGCTTGGGTTGGTTT+AGG | 0.371129 | 4.3:-25865434 | None:intergenic |
| AAGATAAGAATGTGACATTA+TGG | 0.388970 | 4.3:+25861753 | MS.gene47513:CDS |
| AACCATGATTCCATTTAAGT+TGG | 0.389606 | 4.3:-25862970 | None:intergenic |
| ATATATAGTTATGACAGAAT+TGG | 0.390395 | 4.3:-25861618 | None:intergenic |
| GTTTGTCGGTTAAGAGTTCC+AGG | 0.393269 | 4.3:+25862654 | MS.gene47513:CDS |
| TGATGATGGATCTTTGCTTA+TGG | 0.395412 | 4.3:+25861586 | MS.gene47513:CDS |
| CAAGAAGTGCAGACCTCTAC+TGG | 0.395633 | 4.3:+25863783 | MS.gene47513:CDS |
| ACTTTATCAAGTTTGATGTT+TGG | 0.396949 | 4.3:-25861539 | None:intergenic |
| GATTTGTATTTGCAGTTGTT+AGG | 0.397376 | 4.3:+25865763 | MS.gene47513:intron |
| TCAGAGCTGAATTGAATTGC+CGG | 0.397889 | 4.3:-25862558 | None:intergenic |
| GATGCTCAATGGTCAAATTC+AGG | 0.398670 | 4.3:+25863229 | MS.gene47513:CDS |
| AAAACAGAAGCCACGAGATT+AGG | 0.400924 | 4.3:-25861680 | None:intergenic |
| GTCCATAATGAGCATTCTTC+CGG | 0.406175 | 4.3:-25861491 | None:intergenic |
| CAAACTATTTGCAGGCTGAT+TGG | 0.414549 | 4.3:+25865226 | MS.gene47513:intron |
| AAATGGAATCATGGTTCAAC+TGG | 0.419644 | 4.3:+25862977 | MS.gene47513:CDS |
| GCTGGCTTCGGTAACTTGCC+TGG | 0.426870 | 4.3:+25864088 | MS.gene47513:CDS |
| GACCATTGAGCATCATGAAT+AGG | 0.429911 | 4.3:-25863220 | None:intergenic |
| CATGCACCCCATCTGTTGTC+AGG | 0.436554 | 4.3:-25863072 | None:intergenic |
| TGCAGTTGGGTTGGCAGAAG+AGG | 0.444560 | 4.3:-25865462 | None:intergenic |
| TCGAGCCATAGGTTGAGTTT+GGG | 0.446137 | 4.3:-25862921 | None:intergenic |
| AGAATATGACAAGGGCCAAT+TGG | 0.452350 | 4.3:+25861816 | MS.gene47513:CDS |
| TTCTTATCTTGCGGCCCGGA+AGG | 0.454027 | 4.3:-25861740 | None:intergenic |
| CCATTGTCAACTTGAAGCCT+TGG | 0.454121 | 4.3:-25864624 | None:intergenic |
| CCAAATTTACTTGGTGACTC+TGG | 0.455862 | 4.3:-25865252 | None:intergenic |
| GTAACACTGCTAAAGAGATT+AGG | 0.458479 | 4.3:+25861645 | MS.gene47513:CDS |
| TTTCTAAAGGAGTTGTTTGT+CGG | 0.459404 | 4.3:+25862640 | MS.gene47513:CDS |
| TCAAACAGAGTTGCTTTAGC+AGG | 0.461231 | 4.3:-25863760 | None:intergenic |
| TAATTATTTGGCAGGGAAAG+AGG | 0.463070 | 4.3:+25863195 | MS.gene47513:intron |
| ACCATGATTCCATTTAAGTT+GGG | 0.465601 | 4.3:-25862969 | None:intergenic |
| GTCATGAAATAGCACCCATC+TGG | 0.472938 | 4.3:-25864588 | None:intergenic |
| CCTCTACTGGAGCTTGGAAC+TGG | 0.479313 | 4.3:+25863796 | MS.gene47513:CDS |
| TAGAGTTTGCTGTTGTGTAT+GGG | 0.481102 | 4.3:+25863254 | MS.gene47513:CDS |
| CACATTCTTATCTTGCGGCC+CGG | 0.484011 | 4.3:-25861744 | None:intergenic |
| ACTATCCGATGGAACCCAAA+AGG | 0.484935 | 4.3:+25863829 | MS.gene47513:CDS |
| TTGCATCAACCAAGGCTGAA+TGG | 0.489961 | 4.3:+25864544 | MS.gene47513:CDS |
| GTGATGTCACCAAATTTACT+TGG | 0.492747 | 4.3:-25865261 | None:intergenic |
| AATGCTAAATTCAGTGATGA+TGG | 0.493653 | 4.3:+25861572 | MS.gene47513:CDS |
| AATTATTTGGCAGGGAAAGA+GGG | 0.495759 | 4.3:+25863196 | MS.gene47513:intron |
| TGCTTCCCAAACTCAACCTA+TGG | 0.499274 | 4.3:+25862916 | MS.gene47513:CDS |
| ACCCAACTTAAATGGAATCA+TGG | 0.499990 | 4.3:+25862968 | MS.gene47513:CDS |
| AAGTACATTTGCATTGAACT+AGG | 0.501035 | 4.3:+25861114 | MS.gene47513:CDS |
| TGCAGACCTCTACTGGAGCT+TGG | 0.507684 | 4.3:+25863790 | MS.gene47513:CDS |
| TTTGGTTGACCGTTCTGGAA+TGG | 0.507798 | 4.3:-25861521 | None:intergenic |
| AATGGTCTGTGTCAAGTGAA+TGG | 0.511021 | 4.3:+25864562 | MS.gene47513:CDS |
| CAAGGCTTCAAGTTGACAAT+GGG | 0.512251 | 4.3:+25864625 | MS.gene47513:CDS |
| ACCGTTCTGGAATGGAGGGC+CGG | 0.523012 | 4.3:-25861513 | None:intergenic |
| TGACACAGACCATTCAGCCT+TGG | 0.524004 | 4.3:-25864553 | None:intergenic |
| TTATACTACCTGACAACAGA+TGG | 0.526764 | 4.3:+25863064 | MS.gene47513:CDS |
| TTCCATCGGATAGTGTTGTA+AGG | 0.527812 | 4.3:-25863820 | None:intergenic |
| GGTTGACCGTTCTGGAATGG+AGG | 0.530448 | 4.3:-25861518 | None:intergenic |
| GTTGACCGTTCTGGAATGGA+GGG | 0.536529 | 4.3:-25861517 | None:intergenic |
| GGCCTATTCATGATGCTCAA+TGG | 0.539103 | 4.3:+25863218 | MS.gene47513:CDS |
| GCAGTTGTTAGGAGAGAGCT+CGG | 0.541868 | 4.3:+25865774 | MS.gene47513:intron |
| GAAGAATGCTCATTATGGAC+CGG | 0.544657 | 4.3:+25861494 | MS.gene47513:CDS |
| TGCATTTGTTCCAGAATCCA+AGG | 0.545907 | 4.3:+25862722 | MS.gene47513:CDS |
| TGCGGTGGACGATATGCGGC+TGG | 0.549407 | 4.3:-25865491 | None:intergenic |
| CTATCCGATGGAACCCAAAA+GGG | 0.550340 | 4.3:+25863830 | MS.gene47513:CDS |
| AATGCAGCTACATGAGAAGC+AGG | 0.553166 | 4.3:-25862705 | None:intergenic |
| TAAGTTGGGTTGTAGAACAT+CGG | 0.563090 | 4.3:-25862955 | None:intergenic |
| CCAAGGCTTCAAGTTGACAA+TGG | 0.565390 | 4.3:+25864624 | MS.gene47513:CDS |
| ACAACAGATGGGGTGCATGA+AGG | 0.565598 | 4.3:+25863076 | MS.gene47513:CDS |
| TGCAGCTGCTATTCAGGCAG+AGG | 0.568714 | 4.3:+25865523 | MS.gene47513:CDS |
| TATACTACCTGACAACAGAT+GGG | 0.573112 | 4.3:+25863065 | MS.gene47513:CDS |
| TGATGGATCTTTGCTTATGG+TGG | 0.578520 | 4.3:+25861589 | MS.gene47513:CDS |
| GTCCTTACAACACTATCCGA+TGG | 0.588625 | 4.3:+25863818 | MS.gene47513:CDS |
| GCTGCAGTCTTAGCATGCGG+TGG | 0.596595 | 4.3:-25865506 | None:intergenic |
| CAAGTGAATGGTCTCCAGAT+GGG | 0.601629 | 4.3:+25864574 | MS.gene47513:CDS |
| ATTATTTGGCAGGGAAAGAG+GGG | 0.604036 | 4.3:+25863197 | MS.gene47513:intron |
| ATGCCGTGTGCCAACTAATG+AGG | 0.604069 | 4.3:+25862593 | MS.gene47513:CDS |
| AGCATGCGGTGGACGATATG+CGG | 0.604885 | 4.3:-25865495 | None:intergenic |
| AGCATGGCAAAGAACCTGAT+GGG | 0.611297 | 4.3:-25865329 | None:intergenic |
| TCAAGTGAATGGTCTCCAGA+TGG | 0.615111 | 4.3:+25864573 | MS.gene47513:CDS |
| CCAGTTCCAAGCTCCAGTAG+AGG | 0.620222 | 4.3:-25863796 | None:intergenic |
| ATTAGTTGGCACACGGCATG+CGG | 0.625309 | 4.3:-25862589 | None:intergenic |
| AAACTCAACCTATGGCTCGA+CGG | 0.625537 | 4.3:+25862924 | MS.gene47513:CDS |
| TTCAACTGGACTTCTAATTG+TGG | 0.628741 | 4.3:+25862991 | MS.gene47513:CDS |
| AATGTCACATTCTTATCTTG+CGG | 0.630020 | 4.3:-25861749 | None:intergenic |
| GATGTTTGACAAGTTATACC+AGG | 0.635363 | 4.3:+25865131 | MS.gene47513:CDS |
| ACATTATGGAAGATTGAGAC+TGG | 0.641864 | 4.3:+25861767 | MS.gene47513:CDS |
| TGACAGCAACAACAGCTCCA+AGG | 0.647896 | 4.3:+25864607 | MS.gene47513:CDS |
| GGAGAACATACCATATCACC+AGG | 0.651350 | 4.3:-25864106 | None:intergenic |
| GCAGCTGCAGTCTTAGCATG+CGG | 0.651643 | 4.3:-25865509 | None:intergenic |
| GCACCTCATTAGTTGGCACA+CGG | 0.654957 | 4.3:-25862596 | None:intergenic |
| ACCGGCCCTCCATTCCAGAA+CGG | 0.667122 | 4.3:+25861512 | MS.gene47513:CDS |
| GAAACAGCTTGCATCAACCA+AGG | 0.668592 | 4.3:+25864536 | MS.gene47513:CDS |
| TTCTCAGAAGAATATGACAA+GGG | 0.672557 | 4.3:+25861808 | MS.gene47513:CDS |
| ATTCTCAGAAGAATATGACA+AGG | 0.693333 | 4.3:+25861807 | MS.gene47513:CDS |
| ATACTACCTGACAACAGATG+GGG | 0.704485 | 4.3:+25863066 | MS.gene47513:CDS |
| AGGTGATATAGAAAGCTCAG+CGG | 0.737636 | 4.3:-25862685 | None:intergenic |
| GTTTGCAAATAAGTTCCGCG+AGG | 0.750889 | 4.3:-25861707 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAAACATAGAT+AGG | - | chr4.3:25861433-25861452 | None:intergenic | 10.0% |
| !!! | ATCATAATTTTATTTTCTAT+CGG | - | chr4.3:25864231-25864250 | None:intergenic | 10.0% |
| !!! | GATTTTTTGTTTTAATTATT+TGG | + | chr4.3:25863183-25863202 | MS.gene47513:intron | 10.0% |
| !! | AACATAATAATTTAATCAGT+CGG | - | chr4.3:25864131-25864150 | None:intergenic | 15.0% |
| !! | CAACATTAAAAAAAAAAGTT+TGG | + | chr4.3:25864350-25864369 | MS.gene47513:intron | 15.0% |
| !! | TAATAAAATCTATTGATCTA+TGG | - | chr4.3:25864781-25864800 | None:intergenic | 15.0% |
| !! | TATTAATAAAAAACTATGCA+GGG | - | chr4.3:25863613-25863632 | None:intergenic | 15.0% |
| !!! | AAAATTTTATCTTTTAAGAC+CGG | + | chr4.3:25861925-25861944 | MS.gene47513:intron | 15.0% |
| !!! | ATAAACAATTGAATATTTTC+AGG | - | chr4.3:25864688-25864707 | None:intergenic | 15.0% |
| !!! | ATAATTGAAGTTTTTATTTC+TGG | + | chr4.3:25864385-25864404 | MS.gene47513:intron | 15.0% |
| !!! | TAAACAATTGAATATTTTCA+GGG | - | chr4.3:25864687-25864706 | None:intergenic | 15.0% |
| !!! | TCATAATTTTATTTTCTATC+GGG | - | chr4.3:25864230-25864249 | None:intergenic | 15.0% |
| !! | AAATGGAAAGGAAAAAAAAA+AGG | - | chr4.3:25863703-25863722 | None:intergenic | 20.0% |
| !! | AATGTTGAAAATAACGTTTA+TGG | - | chr4.3:25864337-25864356 | None:intergenic | 20.0% |
| !! | AATTGTTTATCTTTATCCAT+GGG | + | chr4.3:25864698-25864717 | MS.gene47513:intron | 20.0% |
| !! | ACATAATAATTTAATCAGTC+GGG | - | chr4.3:25864130-25864149 | None:intergenic | 20.0% |
| !! | AGAAAGAAAAAAAAAACTCA+TGG | - | chr4.3:25863905-25863924 | None:intergenic | 20.0% |
| !! | AGGAAAAAAAAAAGGATTAA+AGG | - | chr4.3:25863695-25863714 | None:intergenic | 20.0% |
| !! | ATATATAGTTATGACAGAAT+TGG | - | chr4.3:25861621-25861640 | None:intergenic | 20.0% |
| !! | ATGAAATATTAGAATAAGCA+TGG | - | chr4.3:25865348-25865367 | None:intergenic | 20.0% |
| !! | CTATTAATAAAAAACTATGC+AGG | - | chr4.3:25863614-25863633 | None:intergenic | 20.0% |
| !! | GAAAGAAAAAAAAAACTCAT+GGG | - | chr4.3:25863904-25863923 | None:intergenic | 20.0% |
| !! | TATATGTGATATGTTCAATA+TGG | + | chr4.3:25863287-25863306 | MS.gene47513:intron | 20.0% |
| !! | TTGAACATATCACATATAAA+AGG | - | chr4.3:25863285-25863304 | None:intergenic | 20.0% |
| !!! | AAAAGTGTAAAGTAAAAATG+CGG | + | chr4.3:25861177-25861196 | MS.gene47513:intron | 20.0% |
| !!! | AAGATGACTTTATTGTTTTT+TGG | + | chr4.3:25863431-25863450 | MS.gene47513:intron | 20.0% |
| !!! | AATTTAAAATAGAAACAGTG+AGG | - | chr4.3:25865573-25865592 | None:intergenic | 20.0% |
| !!! | AGATGACTTTATTGTTTTTT+GGG | + | chr4.3:25863432-25863451 | MS.gene47513:intron | 20.0% |
| !!! | ATTTAAAATAGAAACAGTGA+GGG | - | chr4.3:25865572-25865591 | None:intergenic | 20.0% |
| !!! | CATAATTTTATTTTCTATCG+GGG | - | chr4.3:25864229-25864248 | None:intergenic | 20.0% |
| !!! | TGATATAAAGTATCTAAATC+AGG | + | chr4.3:25864006-25864025 | MS.gene47513:intron | 20.0% |
| !!! | TTAATTTGATGACATTTATG+AGG | + | chr4.3:25864956-25864975 | MS.gene47513:intron | 20.0% |
| !!! | TTTCTCTTTTAAATCTAAGA+AGG | + | chr4.3:25863929-25863948 | MS.gene47513:intron | 20.0% |
| !!! | TTTGGGACTTTATTTTTTTT+GGG | + | chr4.3:25863449-25863468 | MS.gene47513:intron | 20.0% |
| !!! | TTTGTTTTAATTATTTGGCA+GGG | + | chr4.3:25863188-25863207 | MS.gene47513:intron | 20.0% |
| !!! | TTTTGGGACTTTATTTTTTT+TGG | + | chr4.3:25863448-25863467 | MS.gene47513:intron | 20.0% |
| !!! | TTTTGTTTTAATTATTTGGC+AGG | + | chr4.3:25863187-25863206 | MS.gene47513:intron | 20.0% |
| ! | AAAACAAATCAGAGTTACTA+TGG | + | chr4.3:25863031-25863050 | MS.gene47513:CDS | 25.0% |
| ! | AAACTCATTCAAGAATTCTA+GGG | - | chr4.3:25865710-25865729 | None:intergenic | 25.0% |
| ! | AACAATTAGAACATACTAAG+AGG | - | chr4.3:25863109-25863128 | None:intergenic | 25.0% |
| ! | AAGATAAGAATGTGACATTA+TGG | + | chr4.3:25861753-25861772 | MS.gene47513:CDS | 25.0% |
| ! | AATGAAAAATGCTTTCTTAG+TGG | - | chr4.3:25865044-25865063 | None:intergenic | 25.0% |
| ! | ACTTTATCAAGTTTGATGTT+TGG | - | chr4.3:25861542-25861561 | None:intergenic | 25.0% |
| ! | ATTCAACAATACATACCAAT+TGG | - | chr4.3:25861834-25861853 | None:intergenic | 25.0% |
| ! | CAATTGTTTATCTTTATCCA+TGG | + | chr4.3:25864697-25864716 | MS.gene47513:intron | 25.0% |
| ! | GAAAATAAACATCCAACAAA+TGG | - | chr4.3:25863720-25863739 | None:intergenic | 25.0% |
| ! | TAAAGTCATCTTGCAAAAAT+TGG | - | chr4.3:25863423-25863442 | None:intergenic | 25.0% |
| ! | TATATTTGATTGCAATCACT+TGG | + | chr4.3:25864859-25864878 | MS.gene47513:intron | 25.0% |
| ! | TCACTTGGTTATATATAACT+TGG | + | chr4.3:25864874-25864893 | MS.gene47513:intron | 25.0% |
| ! | TGGTATGTATTGTTGAATTA+TGG | + | chr4.3:25861836-25861855 | MS.gene47513:intron | 25.0% |
| ! | TTTAAAGAAGAACTGATGAT+TGG | + | chr4.3:25863133-25863152 | MS.gene47513:intron | 25.0% |
| !! | ACTGCAAATACAAATCATTT+TGG | - | chr4.3:25865759-25865778 | None:intergenic | 25.0% |
| !! | GAATTGATGCTATTGTTATT+TGG | + | chr4.3:25862803-25862822 | MS.gene47513:intron | 25.0% |
| !! | TTTTGTTCTTTTTCCATTGA+AGG | + | chr4.3:25865067-25865086 | MS.gene47513:intron | 25.0% |
| !!! | ATGCAAATGTACTTAGTTTT+TGG | - | chr4.3:25861108-25861127 | None:intergenic | 25.0% |
| !!! | ATTTTTCATTTTGCTGTTCT+AGG | + | chr4.3:25864491-25864510 | MS.gene47513:intron | 25.0% |
| !!! | GGCTTTTAAAATCATATACA+AGG | - | chr4.3:25863562-25863581 | None:intergenic | 25.0% |
| !!! | TTTCTTTGTTTTTTCCTTTC+TGG | + | chr4.3:25864150-25864169 | MS.gene47513:intron | 25.0% |
| !!! | TTTTTTTCCTTTCCATTTGT+TGG | + | chr4.3:25863705-25863724 | MS.gene47513:intron | 25.0% |
| AAAAATTGCACCTCATTAGT+TGG | - | chr4.3:25862606-25862625 | None:intergenic | 30.0% | |
| AAAATTCCATGAACCATTGT+AGG | + | chr4.3:25862856-25862875 | MS.gene47513:intron | 30.0% | |
| AAATTCCATGAACCATTGTA+GGG | + | chr4.3:25862857-25862876 | MS.gene47513:intron | 30.0% | |
| AACCATGATTCCATTTAAGT+TGG | - | chr4.3:25862973-25862992 | None:intergenic | 30.0% | |
| AAGTACATTTGCATTGAACT+AGG | + | chr4.3:25861114-25861133 | MS.gene47513:CDS | 30.0% | |
| AATATCACAAGCAATTCTCA+TGG | + | chr4.3:25864308-25864327 | MS.gene47513:intron | 30.0% | |
| AATGAATCAATCGAAGAAGA+AGG | + | chr4.3:25861285-25861304 | MS.gene47513:intron | 30.0% | |
| AATGCTAAATTCAGTGATGA+TGG | + | chr4.3:25861572-25861591 | MS.gene47513:CDS | 30.0% | |
| AATGTCACATTCTTATCTTG+CGG | - | chr4.3:25861752-25861771 | None:intergenic | 30.0% | |
| ACAAGCAAAAATTTGTACAC+TGG | - | chr4.3:25862891-25862910 | None:intergenic | 30.0% | |
| ATAAAACTGCAAAACAGTCA+AGG | - | chr4.3:25864063-25864082 | None:intergenic | 30.0% | |
| ATAATTCAACATTCTCGTAG+TGG | - | chr4.3:25864279-25864298 | None:intergenic | 30.0% | |
| ATGAATCAGAAAACATGCTA+TGG | + | chr4.3:25864985-25865004 | MS.gene47513:intron | 30.0% | |
| ATTCTCAGAAGAATATGACA+AGG | + | chr4.3:25861807-25861826 | MS.gene47513:CDS | 30.0% | |
| ATTTCAGCAATAAGTTTGCA+TGG | + | chr4.3:25865603-25865622 | MS.gene47513:intron | 30.0% | |
| CAAACTCATTCAAGAATTCT+AGG | - | chr4.3:25865711-25865730 | None:intergenic | 30.0% | |
| GACAGTTAAAACATAAGTCA+TGG | - | chr4.3:25862519-25862538 | None:intergenic | 30.0% | |
| GATAGGATTATAAAGATTGG+GGG | + | chr4.3:25862077-25862096 | MS.gene47513:intron | 30.0% | |
| GATATTTGCTTAAGATACCA+GGG | + | chr4.3:25863349-25863368 | MS.gene47513:intron | 30.0% | |
| GATTTGTATTTGCAGTTGTT+AGG | + | chr4.3:25865763-25865782 | MS.gene47513:intron | 30.0% | |
| GGATAGGATTATAAAGATTG+GGG | + | chr4.3:25862076-25862095 | MS.gene47513:intron | 30.0% | |
| GGCATAACTAAAACATGTTA+AGG | - | chr4.3:25863742-25863761 | None:intergenic | 30.0% | |
| GGGATAGGATTATAAAGATT+GGG | + | chr4.3:25862075-25862094 | MS.gene47513:intron | 30.0% | |
| TAAAACTGCAAAACAGTCAA+GGG | - | chr4.3:25864062-25864081 | None:intergenic | 30.0% | |
| TAAACATCCAACAAATGGAA+AGG | - | chr4.3:25863715-25863734 | None:intergenic | 30.0% | |
| TACTGAACTGAAAACTAAAG+TGG | - | chr4.3:25861350-25861369 | None:intergenic | 30.0% | |
| TATAAAGATTGGGGGAAAAT+AGG | + | chr4.3:25862085-25862104 | MS.gene47513:intron | 30.0% | |
| TGAATATCAAACTTGCGTTT+GGG | + | chr4.3:25861203-25861222 | MS.gene47513:intron | 30.0% | |
| TGAATCAGAAAACATGCTAT+GGG | + | chr4.3:25864986-25865005 | MS.gene47513:intron | 30.0% | |
| TGATATTTGCTTAAGATACC+AGG | + | chr4.3:25863348-25863367 | MS.gene47513:intron | 30.0% | |
| TGGGATAGGATTATAAAGAT+TGG | + | chr4.3:25862074-25862093 | MS.gene47513:intron | 30.0% | |
| TTCTCAGAAGAATATGACAA+GGG | + | chr4.3:25861808-25861827 | MS.gene47513:CDS | 30.0% | |
| TTTGAAAATAACAGTAGAGC+TGG | + | chr4.3:25863500-25863519 | MS.gene47513:intron | 30.0% | |
| TTTGATTACTATTCGAAAGC+AGG | + | chr4.3:25863377-25863396 | MS.gene47513:intron | 30.0% | |
| ! | ACAAAATAAAAGCAGCCTTT+TGG | - | chr4.3:25864757-25864776 | None:intergenic | 30.0% |
| ! | ACCATGATTCCATTTAAGTT+GGG | - | chr4.3:25862972-25862991 | None:intergenic | 30.0% |
| ! | AGTAGTTCTACTCTTAATAG+TGG | + | chr4.3:25865648-25865667 | MS.gene47513:intron | 30.0% |
| ! | AGTGTACAAATTTTTGCTTG+TGG | + | chr4.3:25862890-25862909 | MS.gene47513:CDS | 30.0% |
| ! | GAAGATATTTTGTGCTTGAT+TGG | + | chr4.3:25864175-25864194 | MS.gene47513:intron | 30.0% |
| ! | TTTCTAAAGGAGTTGTTTGT+CGG | + | chr4.3:25862640-25862659 | MS.gene47513:CDS | 30.0% |
| !! | CTGTTTTGCAGTTTTATGTT+TGG | + | chr4.3:25864066-25864085 | MS.gene47513:intron | 30.0% |
| !! | TACCATCACTTTTATCAGAT+TGG | + | chr4.3:25864252-25864271 | MS.gene47513:intron | 30.0% |
| !!! | GAAAGTTTTAGACTTAGATC+AGG | + | chr4.3:25863471-25863490 | MS.gene47513:intron | 30.0% |
| !!! | TATTTTGGGATTACGTAGAA+AGG | + | chr4.3:25864514-25864533 | MS.gene47513:CDS | 30.0% |
| !!! | TTCTGTTTGTTTTAGTTCGA+CGG | + | chr4.3:25861468-25861487 | MS.gene47513:intron | 30.0% |
| !!! | TTTGCTGTTCTAGGTATTTT+GGG | + | chr4.3:25864500-25864519 | MS.gene47513:intron | 30.0% |
| !!! | TTTTGCTGTTCTAGGTATTT+TGG | + | chr4.3:25864499-25864518 | MS.gene47513:intron | 30.0% |
| AAAAATCGTTATCGTCGTTG+TGG | - | chr4.3:25863170-25863189 | None:intergenic | 35.0% | |
| AAAATAGGCTTAGGTGGTTT+GGG | + | chr4.3:25862100-25862119 | MS.gene47513:intron | 35.0% | |
| AAACATTCCAAAAACCTTCC+GGG | + | chr4.3:25861726-25861745 | MS.gene47513:CDS | 35.0% | |
| AAACCAAATAGGCTTAGTCT+TGG | - | chr4.3:25862316-25862335 | None:intergenic | 35.0% | |
| AAATGGAATCATGGTTCAAC+TGG | + | chr4.3:25862977-25862996 | MS.gene47513:CDS | 35.0% | |
| AATTATTTGGCAGGGAAAGA+GGG | + | chr4.3:25863196-25863215 | MS.gene47513:intron | 35.0% | |
| AATTCCATGAACCATTGTAG+GGG | + | chr4.3:25862858-25862877 | MS.gene47513:intron | 35.0% | |
| ACATTATGGAAGATTGAGAC+TGG | + | chr4.3:25861767-25861786 | MS.gene47513:CDS | 35.0% | |
| ACCCAACTTAAATGGAATCA+TGG | + | chr4.3:25862968-25862987 | MS.gene47513:CDS | 35.0% | |
| AGTAAGAAGAGTAGATCAGA+TGG | + | chr4.3:25862152-25862171 | MS.gene47513:intron | 35.0% | |
| AGTGTAAAGTAAAAATGCGG+TGG | + | chr4.3:25861180-25861199 | MS.gene47513:intron | 35.0% | |
| AGTGTAAGATGTCATCCAAA+AGG | + | chr4.3:25864739-25864758 | MS.gene47513:intron | 35.0% | |
| ATGGCATCTCTTGAGATATT+AGG | + | chr4.3:25861379-25861398 | MS.gene47513:CDS | 35.0% | |
| ATTGGCTAAATTAGGACTAC+TGG | + | chr4.3:25864193-25864212 | MS.gene47513:intron | 35.0% | |
| ATTGTGTGCAAACTATTTGC+AGG | + | chr4.3:25865218-25865237 | MS.gene47513:intron | 35.0% | |
| CAAAATATCTTCCACCAGAA+AGG | - | chr4.3:25864167-25864186 | None:intergenic | 35.0% | |
| CAAACATTCCAAAAACCTTC+CGG | + | chr4.3:25861725-25861744 | MS.gene47513:CDS | 35.0% | |
| CACGTATTCTCAAACCAAAT+AGG | - | chr4.3:25862327-25862346 | None:intergenic | 35.0% | |
| CAGTTCAGTATTCTCTCTAA+TGG | + | chr4.3:25861360-25861379 | MS.gene47513:intron | 35.0% | |
| CATCTCTTGAGATATTAGGT+AGG | + | chr4.3:25861383-25861402 | MS.gene47513:intron | 35.0% | |
| CCATTTCCTTGACAAATCTT+CGG | - | chr4.3:25862415-25862434 | None:intergenic | 35.0% | |
| CTTGAAGATAAAAACCCATC+AGG | + | chr4.3:25865315-25865334 | MS.gene47513:CDS | 35.0% | |
| GACCAATCTGATAAAAGTGA+TGG | - | chr4.3:25864257-25864276 | None:intergenic | 35.0% | |
| GATGTTTGACAAGTTATACC+AGG | + | chr4.3:25865131-25865150 | MS.gene47513:CDS | 35.0% | |
| GGATAGACATATATAACCAG+AGG | + | chr4.3:25862176-25862195 | MS.gene47513:intron | 35.0% | |
| GTAACACTGCTAAAGAGATT+AGG | + | chr4.3:25861645-25861664 | MS.gene47513:CDS | 35.0% | |
| GTGAATATCAAACTTGCGTT+TGG | + | chr4.3:25861202-25861221 | MS.gene47513:intron | 35.0% | |
| GTGATGTCACCAAATTTACT+TGG | - | chr4.3:25865264-25865283 | None:intergenic | 35.0% | |
| GTGGTTAATGTCAAAACAAC+AGG | - | chr4.3:25861331-25861350 | None:intergenic | 35.0% | |
| GTTCTACAACCCAACTTAAA+TGG | + | chr4.3:25862960-25862979 | MS.gene47513:CDS | 35.0% | |
| GTTGTATGGAACATTGTGTT+GGG | + | chr4.3:25861952-25861971 | MS.gene47513:intron | 35.0% | |
| TAAGTCATGGTGAGAATGTT+AGG | - | chr4.3:25862506-25862525 | None:intergenic | 35.0% | |
| TAATTATTTGGCAGGGAAAG+AGG | + | chr4.3:25863195-25863214 | MS.gene47513:intron | 35.0% | |
| TATACTACCTGACAACAGAT+GGG | + | chr4.3:25863065-25863084 | MS.gene47513:CDS | 35.0% | |
| TGTCAATGTATCTCTTGTTC+AGG | + | chr4.3:25862535-25862554 | MS.gene47513:intron | 35.0% | |
| TGTTGTATGGAACATTGTGT+TGG | + | chr4.3:25861951-25861970 | MS.gene47513:intron | 35.0% | |
| TTATACTACCTGACAACAGA+TGG | + | chr4.3:25863064-25863083 | MS.gene47513:CDS | 35.0% | |
| TTCAACTGGACTTCTAATTG+TGG | + | chr4.3:25862991-25863010 | MS.gene47513:CDS | 35.0% | |
| TTGTTTCCGAAGATTTGTCA+AGG | + | chr4.3:25862406-25862425 | MS.gene47513:intron | 35.0% | |
| ! | AACCAAATAGGCTTAGTCTT+GGG | - | chr4.3:25862315-25862334 | None:intergenic | 35.0% |
| ! | AATGTTTTCTCAAACCAACC+AGG | + | chr4.3:25862479-25862498 | MS.gene47513:intron | 35.0% |
| ! | CAAAGATGAGAATGTTGCTT+TGG | + | chr4.3:25862033-25862052 | MS.gene47513:intron | 35.0% |
| ! | GATACTGGGGATTTTTCTAA+AGG | + | chr4.3:25862627-25862646 | MS.gene47513:CDS | 35.0% |
| ! | TAAGTTGGGTTGTAGAACAT+CGG | - | chr4.3:25862958-25862977 | None:intergenic | 35.0% |
| ! | TGAGGATACATTTCCCTTTT+GGG | - | chr4.3:25863846-25863865 | None:intergenic | 35.0% |
| ! | TGTGCTTGATTGGCTAAATT+AGG | + | chr4.3:25864185-25864204 | MS.gene47513:intron | 35.0% |
| ! | TTTTTGTCACCAAACGAATG+AGG | + | chr4.3:25862781-25862800 | MS.gene47513:intron | 35.0% |
| !! | AGGTGCAATTTTTCGATACT+GGG | + | chr4.3:25862613-25862632 | MS.gene47513:CDS | 35.0% |
| !! | TAGAGTTTGCTGTTGTGTAT+GGG | + | chr4.3:25863254-25863273 | MS.gene47513:CDS | 35.0% |
| !! | TGATGATGGATCTTTGCTTA+TGG | + | chr4.3:25861586-25861605 | MS.gene47513:CDS | 35.0% |
| !! | TTAGAGTTTGCTGTTGTGTA+TGG | + | chr4.3:25863253-25863272 | MS.gene47513:CDS | 35.0% |
| !! | TTTGCAGTTTTATGTTTGGC+TGG | + | chr4.3:25864070-25864089 | MS.gene47513:intron | 35.0% |
| !!! | CTTTGTTTTTTCCTTTCTGG+TGG | + | chr4.3:25864153-25864172 | MS.gene47513:intron | 35.0% |
| !!! | TTTTCAAGTTCCTAATCTCG+TGG | + | chr4.3:25861670-25861689 | MS.gene47513:CDS | 35.0% |
| AAAACAGAAGCCACGAGATT+AGG | - | chr4.3:25861683-25861702 | None:intergenic | 40.0% | |
| AAATCTAAGAAGGACCCTTG+AGG | + | chr4.3:25863939-25863958 | MS.gene47513:intron | 40.0% | |
| AAGAAGAGTAGATCAGATGG+AGG | + | chr4.3:25862155-25862174 | MS.gene47513:intron | 40.0% | |
| AATCTAAGAAGGACCCTTGA+GGG | + | chr4.3:25863940-25863959 | MS.gene47513:intron | 40.0% | |
| AATGGTCTGTGTCAAGTGAA+TGG | + | chr4.3:25864562-25864581 | MS.gene47513:CDS | 40.0% | |
| AATGTATCTCTTGTTCAGGC+CGG | + | chr4.3:25862539-25862558 | MS.gene47513:intron | 40.0% | |
| AATGTTCCATACAACATCGC+CGG | - | chr4.3:25861947-25861966 | None:intergenic | 40.0% | |
| ACATATATAACCAGAGGCAG+AGG | + | chr4.3:25862182-25862201 | MS.gene47513:intron | 40.0% | |
| AGAATATGACAAGGGCCAAT+TGG | + | chr4.3:25861816-25861835 | MS.gene47513:CDS | 40.0% | |
| AGGGAATATCTAGTCCAGTT+GGG | - | chr4.3:25863594-25863613 | None:intergenic | 40.0% | |
| AGGTGATATAGAAAGCTCAG+CGG | - | chr4.3:25862688-25862707 | None:intergenic | 40.0% | |
| ATACTACCTGACAACAGATG+GGG | + | chr4.3:25863066-25863085 | MS.gene47513:CDS | 40.0% | |
| ATAGTAATCAAACCAAGCCC+TGG | - | chr4.3:25863369-25863388 | None:intergenic | 40.0% | |
| ATCAGAAAACATGCTATGGG+AGG | + | chr4.3:25864989-25865008 | MS.gene47513:intron | 40.0% | |
| ATGCAATGACATCTGCGAAA+AGG | - | chr4.3:25865200-25865219 | None:intergenic | 40.0% | |
| ATTATTTGGCAGGGAAAGAG+GGG | + | chr4.3:25863197-25863216 | MS.gene47513:intron | 40.0% | |
| ATTCCATGAACCATTGTAGG+GGG | + | chr4.3:25862859-25862878 | MS.gene47513:intron | 40.0% | |
| ATTTGGCACGCTGTGATTTA+GGG | + | chr4.3:25862820-25862839 | MS.gene47513:intron | 40.0% | |
| CAAACTATTTGCAGGCTGAT+TGG | + | chr4.3:25865226-25865245 | MS.gene47513:intron | 40.0% | |
| CCAGAGTCACCAAGTAAATT+TGG | + | chr4.3:25865252-25865271 | MS.gene47513:CDS | 40.0% | |
| CCGAAGATTTGTCAAGGAAA+TGG | + | chr4.3:25862412-25862431 | MS.gene47513:intron | 40.0% | |
| CTAAGTCTCCATGATTGTTG+AGG | - | chr4.3:25862756-25862775 | None:intergenic | 40.0% | |
| CTTATCCCATTGAGTAGCAT+CGG | - | chr4.3:25862235-25862254 | None:intergenic | 40.0% | |
| CTTGACCTGCAAAAAGTTCA+TGG | - | chr4.3:25865412-25865431 | None:intergenic | 40.0% | |
| GAAAATAGGCTTAGGTGGTT+TGG | + | chr4.3:25862099-25862118 | MS.gene47513:intron | 40.0% | |
| GAAGAATGCTCATTATGGAC+CGG | + | chr4.3:25861494-25861513 | MS.gene47513:CDS | 40.0% | |
| GACCATTGAGCATCATGAAT+AGG | - | chr4.3:25863223-25863242 | None:intergenic | 40.0% | |
| GATGCTCAATGGTCAAATTC+AGG | + | chr4.3:25863229-25863248 | MS.gene47513:CDS | 40.0% | |
| GATGTGTGATAGGACTAGAT+GGG | + | chr4.3:25862055-25862074 | MS.gene47513:intron | 40.0% | |
| GCAAAAATTTGTACACTGGC+AGG | - | chr4.3:25862887-25862906 | None:intergenic | 40.0% | |
| GCAAACATTTGCTTCGTATG+AGG | + | chr4.3:25864459-25864478 | MS.gene47513:intron | 40.0% | |
| GCATCAATTCCTCATTCGTT+TGG | - | chr4.3:25862793-25862812 | None:intergenic | 40.0% | |
| GTCCATAATGAGCATTCTTC+CGG | - | chr4.3:25861494-25861513 | None:intergenic | 40.0% | |
| TATTTGGCACGCTGTGATTT+AGG | + | chr4.3:25862819-25862838 | MS.gene47513:intron | 40.0% | |
| TCAATGGGATAAGGCTTAGT+TGG | + | chr4.3:25862242-25862261 | MS.gene47513:intron | 40.0% | |
| TCAGAGCTGAATTGAATTGC+CGG | - | chr4.3:25862561-25862580 | None:intergenic | 40.0% | |
| TGCATTTGTTCCAGAATCCA+AGG | + | chr4.3:25862722-25862741 | MS.gene47513:CDS | 40.0% | |
| TGTATCCTCAGCTGATGATT+TGG | + | chr4.3:25863856-25863875 | MS.gene47513:intron | 40.0% | |
| TTCCATCGGATAGTGTTGTA+AGG | - | chr4.3:25863823-25863842 | None:intergenic | 40.0% | |
| ! | ATGGGAGGATATTTTGCTGA+TGG | + | chr4.3:25865004-25865023 | MS.gene47513:intron | 40.0% |
| ! | CAAGGATTGGAACTTTGAAG+AGG | + | chr4.3:25863970-25863989 | MS.gene47513:intron | 40.0% |
| ! | CATGAACTTTTTGCAGGTCA+AGG | + | chr4.3:25865410-25865429 | MS.gene47513:intron | 40.0% |
| ! | CCAAATTTACTTGGTGACTC+TGG | - | chr4.3:25865255-25865274 | None:intergenic | 40.0% |
| ! | CTGAGGATACATTTCCCTTT+TGG | - | chr4.3:25863847-25863866 | None:intergenic | 40.0% |
| ! | GAAGACCATGAACTTTTTGC+AGG | + | chr4.3:25865404-25865423 | MS.gene47513:intron | 40.0% |
| ! | TCAAACAGAGTTGCTTTAGC+AGG | - | chr4.3:25863763-25863782 | None:intergenic | 40.0% |
| ! | TGATGGATCTTTGCTTATGG+TGG | + | chr4.3:25861589-25861608 | MS.gene47513:CDS | 40.0% |
| !! | CAAGGCTTCAAGTTGACAAT+GGG | + | chr4.3:25864625-25864644 | MS.gene47513:CDS | 40.0% |
| !! | GAGGTGCAATTTTTCGATAC+TGG | + | chr4.3:25862612-25862631 | MS.gene47513:CDS | 40.0% |
| !! | GGTGCAATTTTTCGATACTG+GGG | + | chr4.3:25862614-25862633 | MS.gene47513:CDS | 40.0% |
| !! | TGTTGCTTTGGATGTGTGAT+AGG | + | chr4.3:25862045-25862064 | MS.gene47513:intron | 40.0% |
| !!! | ATTTCCCTTTTGGGTTCCAT+CGG | - | chr4.3:25863837-25863856 | None:intergenic | 40.0% |
| !!! | GTTTTATGTTTGGCTGGCTT+CGG | + | chr4.3:25864076-25864095 | MS.gene47513:intron | 40.0% |
| AAACTCAACCTATGGCTCGA+CGG | + | chr4.3:25862924-25862943 | MS.gene47513:CDS | 45.0% | |
| AAGCATGGCAAAGAACCTGA+TGG | - | chr4.3:25865333-25865352 | None:intergenic | 45.0% | |
| AAGCCATAACGATACCCAAC+TGG | + | chr4.3:25863577-25863596 | MS.gene47513:intron | 45.0% | |
| AATGCAGCTACATGAGAAGC+AGG | - | chr4.3:25862708-25862727 | None:intergenic | 45.0% | |
| ACTATCCGATGGAACCCAAA+AGG | + | chr4.3:25863829-25863848 | MS.gene47513:CDS | 45.0% | |
| AGCATGGCAAAGAACCTGAT+GGG | - | chr4.3:25865332-25865351 | None:intergenic | 45.0% | |
| AGTTCGAGATACTACTGACC+TGG | - | chr4.3:25865152-25865171 | None:intergenic | 45.0% | |
| ATGGGTATGTTTGTCCACTG+TGG | + | chr4.3:25864643-25864662 | MS.gene47513:intron | 45.0% | |
| ATGGTGAGAATGTTAGGACC+TGG | - | chr4.3:25862500-25862519 | None:intergenic | 45.0% | |
| ATGTAGCCGATGCTACTCAA+TGG | + | chr4.3:25862226-25862245 | MS.gene47513:intron | 45.0% | |
| CAAGTGAATGGTCTCCAGAT+GGG | + | chr4.3:25864574-25864593 | MS.gene47513:CDS | 45.0% | |
| CACTTATGTTACTCTCGTGC+TGG | - | chr4.3:25862010-25862029 | None:intergenic | 45.0% | |
| CAGGGAATATCTAGTCCAGT+TGG | - | chr4.3:25863595-25863614 | None:intergenic | 45.0% | |
| CCATTGTCAACTTGAAGCCT+TGG | - | chr4.3:25864627-25864646 | None:intergenic | 45.0% | |
| CGATGCTACTCAATGGGATA+AGG | + | chr4.3:25862233-25862252 | MS.gene47513:intron | 45.0% | |
| CTATCCGATGGAACCCAAAA+GGG | + | chr4.3:25863830-25863849 | MS.gene47513:CDS | 45.0% | |
| CTATTCGAAAGCAGGACTTG+TGG | + | chr4.3:25863385-25863404 | MS.gene47513:intron | 45.0% | |
| GAAACAGCTTGCATCAACCA+AGG | + | chr4.3:25864536-25864555 | MS.gene47513:CDS | 45.0% | |
| GATTGGGGGAAAATAGGCTT+AGG | + | chr4.3:25862091-25862110 | MS.gene47513:intron | 45.0% | |
| GGAGAACATACCATATCACC+AGG | - | chr4.3:25864109-25864128 | None:intergenic | 45.0% | |
| GGATGTGTGATAGGACTAGA+TGG | + | chr4.3:25862054-25862073 | MS.gene47513:intron | 45.0% | |
| GGCCTATTCATGATGCTCAA+TGG | + | chr4.3:25863218-25863237 | MS.gene47513:CDS | 45.0% | |
| GTCATGAAATAGCACCCATC+TGG | - | chr4.3:25864591-25864610 | None:intergenic | 45.0% | |
| GTCCTTACAACACTATCCGA+TGG | + | chr4.3:25863818-25863837 | MS.gene47513:CDS | 45.0% | |
| GTGATAGGACTAGATGGGAT+AGG | + | chr4.3:25862060-25862079 | MS.gene47513:intron | 45.0% | |
| GTTTGCAAATAAGTTCCGCG+AGG | - | chr4.3:25861710-25861729 | None:intergenic | 45.0% | |
| TAAGACTGCAGCTGCTATTC+AGG | + | chr4.3:25865517-25865536 | MS.gene47513:CDS | 45.0% | |
| TCAAGTGAATGGTCTCCAGA+TGG | + | chr4.3:25864573-25864592 | MS.gene47513:CDS | 45.0% | |
| TCTGTGCTCCTCAACAATCA+TGG | + | chr4.3:25862745-25862764 | MS.gene47513:intron | 45.0% | |
| TGAGAATGTTAGGACCTGGT+TGG | - | chr4.3:25862496-25862515 | None:intergenic | 45.0% | |
| TGATGCCAAATCATCAGCTG+AGG | - | chr4.3:25863864-25863883 | None:intergenic | 45.0% | |
| TGATGTTTGGTTGACCGTTC+TGG | - | chr4.3:25861529-25861548 | None:intergenic | 45.0% | |
| TGCCCAAGACTAAGCCTATT+TGG | + | chr4.3:25862310-25862329 | MS.gene47513:intron | 45.0% | |
| TGCTTCCCAAACTCAACCTA+TGG | + | chr4.3:25862916-25862935 | MS.gene47513:CDS | 45.0% | |
| TGGGATAAGGCTTAGTTGGT+TGG | + | chr4.3:25862246-25862265 | MS.gene47513:intron | 45.0% | |
| TGGGTATGTTTGTCCACTGT+GGG | + | chr4.3:25864644-25864663 | MS.gene47513:intron | 45.0% | |
| TGTAGCCGATGCTACTCAAT+GGG | + | chr4.3:25862227-25862246 | MS.gene47513:intron | 45.0% | |
| TTAAGACCGGCGATGTTGTA+TGG | + | chr4.3:25861938-25861957 | MS.gene47513:intron | 45.0% | |
| TTGCATCAACCAAGGCTGAA+TGG | + | chr4.3:25864544-25864563 | MS.gene47513:CDS | 45.0% | |
| TTGCTTAAGATACCAGGGCT+TGG | + | chr4.3:25863354-25863373 | MS.gene47513:intron | 45.0% | |
| TTTGGCACGCTGTGATTTAG+GGG | + | chr4.3:25862821-25862840 | MS.gene47513:intron | 45.0% | |
| ! | AACTTGCGTTTGGGCTTTTC+AGG | + | chr4.3:25861212-25861231 | MS.gene47513:intron | 45.0% |
| ! | AAGAGGCTTTTGTAGTGGCT+TGG | - | chr4.3:25865448-25865467 | None:intergenic | 45.0% |
| ! | AGAGGCTTTTGTAGTGGCTT+GGG | - | chr4.3:25865447-25865466 | None:intergenic | 45.0% |
| ! | AGTCCAGTTGGGTATCGTTA+TGG | - | chr4.3:25863583-25863602 | None:intergenic | 45.0% |
| ! | CAACATAATCAGAGTGCCCA+TGG | - | chr4.3:25864717-25864736 | None:intergenic | 45.0% |
| ! | GTCATCTATCGCGATTTTCG+TGG | + | chr4.3:25861239-25861258 | MS.gene47513:CDS | 45.0% |
| ! | GTTTGTCGGTTAAGAGTTCC+AGG | + | chr4.3:25862654-25862673 | MS.gene47513:CDS | 45.0% |
| ! | TCGAGCCATAGGTTGAGTTT+GGG | - | chr4.3:25862924-25862943 | None:intergenic | 45.0% |
| ! | TGGTTTTTGTGCAGTTGGGT+TGG | - | chr4.3:25865474-25865493 | None:intergenic | 45.0% |
| !! | ATTGAGTAGCATCGGCTACA+TGG | - | chr4.3:25862227-25862246 | None:intergenic | 45.0% |
| !! | CCAAGGCTTCAAGTTGACAA+TGG | + | chr4.3:25864624-25864643 | MS.gene47513:CDS | 45.0% |
| !! | TTTGGTTGACCGTTCTGGAA+TGG | - | chr4.3:25861524-25861543 | None:intergenic | 45.0% |
| !!! | GTTTGTTTTAGTTCGACGGC+CGG | + | chr4.3:25861472-25861491 | MS.gene47513:intron | 45.0% |
| AAAAAGCTCCGTCGAGCCAT+AGG | - | chr4.3:25862935-25862954 | None:intergenic | 50.0% | |
| ACAACAGATGGGGTGCATGA+AGG | + | chr4.3:25863076-25863095 | MS.gene47513:CDS | 50.0% | |
| AGAAGGACCCTTGAGGGTTA+TGG | + | chr4.3:25863946-25863965 | MS.gene47513:intron | 50.0% | |
| AGTAGATCAAGACCCCACAG+TGG | - | chr4.3:25864660-25864679 | None:intergenic | 50.0% | |
| ATCCTTGCCCATAACCCTCA+AGG | - | chr4.3:25863957-25863976 | None:intergenic | 50.0% | |
| ATGCCGTGTGCCAACTAATG+AGG | + | chr4.3:25862593-25862612 | MS.gene47513:CDS | 50.0% | |
| ATTAGTTGGCACACGGCATG+CGG | - | chr4.3:25862592-25862611 | None:intergenic | 50.0% | |
| CACATTCTTATCTTGCGGCC+CGG | - | chr4.3:25861747-25861766 | None:intergenic | 50.0% | |
| GAACCCCCTACAATGGTTCA+TGG | - | chr4.3:25862865-25862884 | None:intergenic | 50.0% | |
| GAAGGACCCTTGAGGGTTAT+GGG | + | chr4.3:25863947-25863966 | MS.gene47513:intron | 50.0% | |
| GCACCTCATTAGTTGGCACA+CGG | - | chr4.3:25862599-25862618 | None:intergenic | 50.0% | |
| GCAGTTGTTAGGAGAGAGCT+CGG | + | chr4.3:25865774-25865793 | MS.gene47513:intron | 50.0% | |
| GGCCGGAAGAATGCTCATTA+TGG | + | chr4.3:25861489-25861508 | MS.gene47513:CDS | 50.0% | |
| GGGTATGTTTGTCCACTGTG+GGG | + | chr4.3:25864645-25864664 | MS.gene47513:intron | 50.0% | |
| GTTCTTCATCGTCCTCGTGT+TGG | - | chr4.3:25861988-25862007 | None:intergenic | 50.0% | |
| TCCTTGCCCATAACCCTCAA+GGG | - | chr4.3:25863956-25863975 | None:intergenic | 50.0% | |
| TGACACAGACCATTCAGCCT+TGG | - | chr4.3:25864556-25864575 | None:intergenic | 50.0% | |
| TGACAGCAACAACAGCTCCA+AGG | + | chr4.3:25864607-25864626 | MS.gene47513:CDS | 50.0% | |
| TGAGGGTTATGGGCAAGGAT+TGG | + | chr4.3:25863957-25863976 | MS.gene47513:intron | 50.0% | |
| TGGGGGAAAATAGGCTTAGG+TGG | + | chr4.3:25862094-25862113 | MS.gene47513:intron | 50.0% | |
| ! | CAAGAAGTGCAGACCTCTAC+TGG | + | chr4.3:25863783-25863802 | MS.gene47513:CDS | 50.0% |
| ! | CGGTAACTTGCCTGGTGATA+TGG | + | chr4.3:25864096-25864115 | MS.gene47513:CDS | 50.0% |
| ! | GGCAGAAGAGGCTTTTGTAG+TGG | - | chr4.3:25865453-25865472 | None:intergenic | 50.0% |
| ! | GTCGAGCCATAGGTTGAGTT+TGG | - | chr4.3:25862925-25862944 | None:intergenic | 50.0% |
| ! | TCTAGTTTGTCCTCTGCCTC+TGG | - | chr4.3:25862195-25862214 | None:intergenic | 50.0% |
| ! | TTGTTGAGGAGCACAGACCT+TGG | - | chr4.3:25862742-25862761 | None:intergenic | 50.0% |
| !! | GCTTTTGTAGTGGCTTGGGT+TGG | - | chr4.3:25865443-25865462 | None:intergenic | 50.0% |
| !! | GTAGTGGCTTGGGTTGGTTT+AGG | - | chr4.3:25865437-25865456 | None:intergenic | 50.0% |
| !! | GTTGACCGTTCTGGAATGGA+GGG | - | chr4.3:25861520-25861539 | None:intergenic | 50.0% |
| !!! | CGGCTGGTTTTTGTGCAGTT+GGG | - | chr4.3:25865478-25865497 | None:intergenic | 50.0% |
| ACCCTTGAGGGTTATGGGCA+AGG | + | chr4.3:25863952-25863971 | MS.gene47513:intron | 55.0% | |
| AGCATGCGGTGGACGATATG+CGG | - | chr4.3:25865498-25865517 | None:intergenic | 55.0% | |
| CATGCACCCCATCTGTTGTC+AGG | - | chr4.3:25863075-25863094 | None:intergenic | 55.0% | |
| CCAGTTCCAAGCTCCAGTAG+AGG | - | chr4.3:25863799-25863818 | None:intergenic | 55.0% | |
| CCTCTACTGGAGCTTGGAAC+TGG | + | chr4.3:25863796-25863815 | MS.gene47513:CDS | 55.0% | |
| GCAGCTGCAGTCTTAGCATG+CGG | - | chr4.3:25865512-25865531 | None:intergenic | 55.0% | |
| GGAGCACAGACCTTGGATTC+TGG | - | chr4.3:25862735-25862754 | None:intergenic | 55.0% | |
| GGCGATGAAGAACCAACACG+AGG | + | chr4.3:25861973-25861992 | MS.gene47513:intron | 55.0% | |
| TGCAGACCTCTACTGGAGCT+TGG | + | chr4.3:25863790-25863809 | MS.gene47513:CDS | 55.0% | |
| TGCAGCTGCTATTCAGGCAG+AGG | + | chr4.3:25865523-25865542 | MS.gene47513:CDS | 55.0% | |
| TTCTTATCTTGCGGCCCGGA+AGG | - | chr4.3:25861743-25861762 | None:intergenic | 55.0% | |
| ! | GCTTCTGTTTTGTCGCCTCG+CGG | + | chr4.3:25861692-25861711 | MS.gene47513:CDS | 55.0% |
| !! | GGTTGACCGTTCTGGAATGG+AGG | - | chr4.3:25861521-25861540 | None:intergenic | 55.0% |
| !! | TGCAGTTGGGTTGGCAGAAG+AGG | - | chr4.3:25865465-25865484 | None:intergenic | 55.0% |
| !!! | GCGGCTGGTTTTTGTGCAGT+TGG | - | chr4.3:25865479-25865498 | None:intergenic | 55.0% |
| ACCGGCCCTCCATTCCAGAA+CGG | + | chr4.3:25861512-25861531 | MS.gene47513:CDS | 60.0% | |
| AGCTCAGCGGAAGCAACTCC+TGG | - | chr4.3:25862675-25862694 | None:intergenic | 60.0% | |
| CTGGCAGGAACCCCCTACAA+TGG | - | chr4.3:25862872-25862891 | None:intergenic | 60.0% | |
| GCTGCAGTCTTAGCATGCGG+TGG | - | chr4.3:25865509-25865528 | None:intergenic | 60.0% | |
| ! | CTTGCGGCCCGGAAGGTTTT+TGG | - | chr4.3:25861736-25861755 | None:intergenic | 60.0% |
| ! | GCTGGCTTCGGTAACTTGCC+TGG | + | chr4.3:25864088-25864107 | MS.gene47513:CDS | 60.0% |
| !! | ACCGTTCTGGAATGGAGGGC+CGG | - | chr4.3:25861516-25861535 | None:intergenic | 60.0% |
| TGCGGTGGACGATATGCGGC+TGG | - | chr4.3:25865494-25865513 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 25861102 | 25865804 | 25861102 | ID=MS.gene47513 |
| chr4.3 | mRNA | 25861102 | 25865804 | 25861102 | ID=MS.gene47513.t1;Parent=MS.gene47513 |
| chr4.3 | exon | 25861102 | 25861135 | 25861102 | ID=MS.gene47513.t1.exon1;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25861102 | 25861135 | 25861102 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25861234 | 25861273 | 25861234 | ID=MS.gene47513.t1.exon2;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25861234 | 25861273 | 25861234 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25861363 | 25861400 | 25861363 | ID=MS.gene47513.t1.exon3;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25861363 | 25861400 | 25861363 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25861483 | 25861837 | 25861483 | ID=MS.gene47513.t1.exon4;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25861483 | 25861837 | 25861483 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25862557 | 25862743 | 25862557 | ID=MS.gene47513.t1.exon5;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25862557 | 25862743 | 25862557 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25862878 | 25863112 | 25862878 | ID=MS.gene47513.t1.exon6;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25862878 | 25863112 | 25862878 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25863209 | 25863277 | 25863209 | ID=MS.gene47513.t1.exon7;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25863209 | 25863277 | 25863209 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25863755 | 25863856 | 25863755 | ID=MS.gene47513.t1.exon8;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25863755 | 25863856 | 25863755 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25864077 | 25864117 | 25864077 | ID=MS.gene47513.t1.exon9;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25864077 | 25864117 | 25864077 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25864513 | 25864646 | 25864513 | ID=MS.gene47513.t1.exon10;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25864513 | 25864646 | 25864513 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25865089 | 25865152 | 25865089 | ID=MS.gene47513.t1.exon11;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25865089 | 25865152 | 25865089 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25865240 | 25865336 | 25865240 | ID=MS.gene47513.t1.exon12;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25865240 | 25865336 | 25865240 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25865426 | 25865544 | 25865426 | ID=MS.gene47513.t1.exon13;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25865426 | 25865544 | 25865426 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| chr4.3 | exon | 25865778 | 25865804 | 25865778 | ID=MS.gene47513.t1.exon14;Parent=MS.gene47513.t1 |
| chr4.3 | CDS | 25865778 | 25865804 | 25865778 | ID=cds.MS.gene47513.t1;Parent=MS.gene47513.t1 |
| Gene Sequence |
| Protein sequence |
