Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33564.t1 | XP_013469854.1 | 94 | 348 | 19 | 1 | 1 | 346 | 1 | 348 | 1.40E-186 | 662.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33564.t1 | A0A072VQ35 | 94.0 | 348 | 19 | 1 | 1 | 346 | 1 | 348 | 1.0e-186 | 662.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene33564 | 0.828213 | 1.02E-54 | -1.69E-46 |
| MS.gene049501 | MS.gene33564 | 0.806444 | 8.20E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene33564 | 0.816652 | 4.95E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene33564 | 0.812926 | 3.31E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene33564 | -0.817163 | 3.80E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene33564 | 0.817372 | 3.41E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene33564 | 0.834181 | 3.48E-56 | -1.69E-46 |
| MS.gene050721 | MS.gene33564 | 0.833795 | 4.34E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene33564 | 0.820161 | 7.94E-53 | -1.69E-46 |
| MS.gene050787 | MS.gene33564 | 0.821985 | 3.02E-53 | -1.69E-46 |
| MS.gene050844 | MS.gene33564 | 0.828353 | 9.43E-55 | -1.69E-46 |
| MS.gene05119 | MS.gene33564 | -0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene051265 | MS.gene33564 | 0.80082 | 1.20E-48 | -1.69E-46 |
| MS.gene052176 | MS.gene33564 | 0.822901 | 1.85E-53 | -1.69E-46 |
| MS.gene052190 | MS.gene33564 | 0.809842 | 1.55E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene33564 | 0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene33564 | 0.802996 | 4.30E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene33564 | 0.803341 | 3.65E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene33564 | 0.812114 | 4.99E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene33564 | 0.806344 | 8.61E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene33564 | 0.801649 | 8.15E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene33564 | 0.8054 | 1.36E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene33564 | 0.835864 | 1.31E-56 | -1.69E-46 |
| MS.gene054472 | MS.gene33564 | 0.810617 | 1.05E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene33564 | 0.813659 | 2.29E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene33564 | 0.806047 | 9.94E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene33564 | 0.804652 | 1.95E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene33564 | 0.813404 | 2.60E-51 | -1.69E-46 |
| MS.gene056069 | MS.gene33564 | -0.826628 | 2.44E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene33564 | 0.823057 | 1.70E-53 | -1.69E-46 |
| MS.gene056589 | MS.gene33564 | 0.800027 | 1.75E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene33564 | 0.823968 | 1.04E-53 | -1.69E-46 |
| MS.gene058139 | MS.gene33564 | 0.807232 | 5.59E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene33564 | 0.811236 | 7.74E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene33564 | 0.800761 | 1.24E-48 | -1.69E-46 |
| MS.gene058636 | MS.gene33564 | 0.802687 | 4.98E-49 | -1.69E-46 |
| MS.gene059249 | MS.gene33564 | 0.80184 | 7.45E-49 | -1.69E-46 |
| MS.gene059789 | MS.gene33564 | 0.830903 | 2.26E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene33564 | 0.832521 | 9.01E-56 | -1.69E-46 |
| MS.gene060572 | MS.gene33564 | 0.843521 | 1.33E-58 | -1.69E-46 |
| MS.gene060683 | MS.gene33564 | 0.836974 | 6.83E-57 | -1.69E-46 |
| MS.gene060685 | MS.gene33564 | 0.835352 | 1.76E-56 | -1.69E-46 |
| MS.gene060803 | MS.gene33564 | 0.811751 | 5.99E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene33564 | -0.833017 | 6.79E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33564.t1 | MTR_1g103900 | 93.966 | 348 | 19 | 1 | 1 | 346 | 1 | 348 | 0.0 | 678 |
| MS.gene33564.t1 | MTR_1g030720 | 91.379 | 348 | 28 | 1 | 1 | 346 | 1 | 348 | 0.0 | 656 |
| MS.gene33564.t1 | MTR_1g030720 | 90.313 | 351 | 32 | 1 | 1 | 349 | 1 | 351 | 0.0 | 653 |
| MS.gene33564.t1 | MTR_1g103870 | 79.310 | 348 | 69 | 2 | 1 | 346 | 1 | 347 | 0.0 | 571 |
| MS.gene33564.t1 | MTR_1g103870 | 78.810 | 269 | 54 | 2 | 1 | 267 | 1 | 268 | 1.53e-153 | 433 |
| MS.gene33564.t1 | MTR_1g030710 | 68.981 | 216 | 16 | 1 | 52 | 267 | 1 | 165 | 8.76e-96 | 283 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33564.t1 | AT3G54970 | 49.860 | 357 | 150 | 8 | 1 | 346 | 1 | 339 | 1.40e-109 | 324 |
| MS.gene33564.t1 | AT3G54970 | 51.634 | 306 | 120 | 7 | 1 | 296 | 1 | 288 | 7.87e-96 | 287 |
| MS.gene33564.t1 | AT3G54970 | 51.307 | 306 | 121 | 7 | 1 | 296 | 1 | 288 | 1.94e-95 | 286 |
| MS.gene33564.t1 | AT3G54970 | 48.693 | 306 | 131 | 7 | 52 | 346 | 1 | 291 | 9.85e-87 | 264 |
| MS.gene33564.t1 | AT3G54970 | 49.458 | 277 | 112 | 7 | 1 | 267 | 1 | 259 | 1.09e-77 | 239 |
| MS.gene33564.t1 | AT3G54970 | 50.588 | 255 | 101 | 6 | 52 | 296 | 1 | 240 | 6.26e-73 | 227 |
Find 82 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTTCATGCTTGTTATTC+TGG | 0.142610 | 1.3:-71204009 | MS.gene33564:CDS |
| CCTTACCCAATCTGAATATT+TGG | 0.169607 | 1.3:+71203592 | None:intergenic |
| TATACAAATTCTATCAAATT+TGG | 0.177330 | 1.3:-71203957 | MS.gene33564:CDS |
| GGTTGTGAAACTTGAAAATT+TGG | 0.238187 | 1.3:+71203881 | None:intergenic |
| GCAACATGTTGATAGTATTC+AGG | 0.271626 | 1.3:-71201258 | MS.gene33564:CDS |
| GGAAGAACACCGTCACTTAT+AGG | 0.290822 | 1.3:+71202463 | None:intergenic |
| CATTTGGCTGTTGCGGGCTA+TGG | 0.328948 | 1.3:-71203632 | MS.gene33564:CDS |
| ATAAGTGACGGTGTTCTTCC+AGG | 0.338929 | 1.3:-71202460 | MS.gene33564:CDS |
| TGCTTCATGCTTGTTATTCT+GGG | 0.340411 | 1.3:-71204008 | MS.gene33564:CDS |
| CATTACAACTCTTGTTAATC+TGG | 0.352836 | 1.3:-71203774 | MS.gene33564:CDS |
| TCGAGGAAATGGTGCACATT+TGG | 0.362170 | 1.3:-71203648 | MS.gene33564:CDS |
| CATGGTCAGAACATGACATT+TGG | 0.366508 | 1.3:-71201776 | MS.gene33564:CDS |
| TCAGATTTCATATCAGTAAA+GGG | 0.375423 | 1.3:+71200463 | None:intergenic |
| ACTTATGTTCCTCCTCAGTT+TGG | 0.388161 | 1.3:-71203674 | MS.gene33564:CDS |
| GAGTAAATGCAGGGTGGACC+TGG | 0.395306 | 1.3:-71201104 | MS.gene33564:intron |
| TACACTTGTGCAGGGTATGC+AGG | 0.400457 | 1.3:-71201833 | MS.gene33564:intron |
| CAGTTTGGTATTCGAGGAAA+TGG | 0.404461 | 1.3:-71203659 | MS.gene33564:CDS |
| GGTGCACATTTGGCTGTTGC+GGG | 0.405671 | 1.3:-71203638 | MS.gene33564:CDS |
| GATGGAGAAACTTCTCGAAA+TGG | 0.410131 | 1.3:+71201798 | None:intergenic |
| GAACTGTTGCTGTCTTATAA+TGG | 0.422884 | 1.3:-71203236 | MS.gene33564:CDS |
| CCTCCTCAGTTTGGTATTCG+AGG | 0.437658 | 1.3:-71203665 | MS.gene33564:CDS |
| TTCGAGAAGTTTCTCCATCA+TGG | 0.437777 | 1.3:-71201794 | MS.gene33564:CDS |
| TTCAGATTTCATATCAGTAA+AGG | 0.442872 | 1.3:+71200462 | None:intergenic |
| CTCTTTCTTGAAGCTAATCC+AGG | 0.442973 | 1.3:-71204146 | MS.gene33564:intron |
| TAAAACTAATGTCAGGTTCA+AGG | 0.443792 | 1.3:-71204223 | None:intergenic |
| CAGCTGCCAAATATTCAGAT+TGG | 0.448719 | 1.3:-71203598 | MS.gene33564:CDS |
| AGTTGTAATGGCCAGCTCCT+TGG | 0.462763 | 1.3:+71203787 | None:intergenic |
| ATGGAGAAACTTCTCGAAAT+GGG | 0.462798 | 1.3:+71201799 | None:intergenic |
| ATTTGGCTGTTGCGGGCTAT+GGG | 0.468361 | 1.3:-71203631 | MS.gene33564:CDS |
| AGCTGCCAAATATTCAGATT+GGG | 0.469870 | 1.3:-71203597 | MS.gene33564:CDS |
| TGGTGCACATTTGGCTGTTG+CGG | 0.478675 | 1.3:-71203639 | MS.gene33564:CDS |
| CAGATTAACAAGAGTTGTAA+TGG | 0.483671 | 1.3:+71203775 | None:intergenic |
| GACCCTCTCTTTCAATGCGA+TGG | 0.485431 | 1.3:+71203814 | None:intergenic |
| GCTTCAAGAAAGAGTTTGAC+GGG | 0.491978 | 1.3:+71204155 | None:intergenic |
| TCAAGGTTTCTCTTCAGTAA+TGG | 0.492959 | 1.3:-71204206 | MS.gene33564:CDS |
| CCAAATATTCAGATTGGGTA+AGG | 0.502564 | 1.3:-71203592 | MS.gene33564:intron |
| TGCTGCAAGTGTGCTGCCAC+TGG | 0.502984 | 1.3:-71203906 | MS.gene33564:CDS |
| ATGGTCAGAACATGACATTT+GGG | 0.507925 | 1.3:-71201775 | MS.gene33564:CDS |
| TTAACAAGCATCTGCAATGC+AGG | 0.511211 | 1.3:+71203860 | None:intergenic |
| TGCAGGGTATGCAGGGATGA+AGG | 0.521268 | 1.3:-71201825 | MS.gene33564:intron |
| GAGAAGGCTCCATGTGATCA+TGG | 0.523928 | 1.3:-71202517 | MS.gene33564:CDS |
| GAGGGTCGATTCCAAGGAGC+TGG | 0.530821 | 1.3:-71203798 | MS.gene33564:CDS |
| AAACGTGGAAGGATATATCA+TGG | 0.531561 | 1.3:-71201205 | MS.gene33564:CDS |
| ACCCTCTCTTTCAATGCGAT+GGG | 0.533023 | 1.3:+71203815 | None:intergenic |
| TTAGATTTAAACAAAAGTTG+TGG | 0.535919 | 1.3:+71203932 | None:intergenic |
| TCAAAGATAAAACTAATGTC+AGG | 0.537281 | 1.3:-71204230 | None:intergenic |
| ATGCAGGATTAGGAAGACTC+TGG | 0.538368 | 1.3:-71203285 | MS.gene33564:intron |
| TGGGCTGATTGCCATTCTGT+TGG | 0.539164 | 1.3:+71201233 | None:intergenic |
| AGCTTCAAGAAAGAGTTTGA+CGG | 0.548677 | 1.3:+71204154 | None:intergenic |
| TGTTAATGATTCAGTGGGGA+AGG | 0.549579 | 1.3:-71203843 | MS.gene33564:CDS |
| ATGCTTGTTAATGATTCAGT+GGG | 0.549812 | 1.3:-71203848 | MS.gene33564:CDS |
| GAAAGAGAGGGTCGATTCCA+AGG | 0.558115 | 1.3:-71203804 | MS.gene33564:CDS |
| GATTATCACAACATTAATCC+AGG | 0.558554 | 1.3:-71201081 | MS.gene33564:intron |
| AGCAACAGTTCTGTTACTGA+TGG | 0.560687 | 1.3:+71203248 | None:intergenic |
| ACACTTGTGCAGGGTATGCA+GGG | 0.560761 | 1.3:-71201832 | MS.gene33564:intron |
| ATTAATGTTGTGATAATCCC+AGG | 0.561193 | 1.3:+71201086 | None:intergenic |
| TGGCTGTTGCGGGCTATGGG+AGG | 0.565968 | 1.3:-71203628 | MS.gene33564:CDS |
| TTGGGATTCAGATGATGAGA+AGG | 0.566798 | 1.3:-71202533 | MS.gene33564:CDS |
| TAAGTGACGGTGTTCTTCCA+GGG | 0.572828 | 1.3:-71202459 | MS.gene33564:CDS |
| ATGTCATTCCAGGTAGCTTG+AGG | 0.574242 | 1.3:-71201286 | MS.gene33564:intron |
| GTATTCAGGTTCCAACAGAA+TGG | 0.575665 | 1.3:-71201244 | MS.gene33564:CDS |
| AGTAAATGCAGGGTGGACCT+GGG | 0.591122 | 1.3:-71201103 | MS.gene33564:intron |
| AGCCCATTCTAAAACGTGGA+AGG | 0.592336 | 1.3:-71201216 | MS.gene33564:CDS |
| CAGATTTCATATCAGTAAAG+GGG | 0.593534 | 1.3:+71200464 | None:intergenic |
| ACTAGTTGACGTATTATCCC+TGG | 0.595519 | 1.3:+71202442 | None:intergenic |
| TGCCCATCGCATTGAAAGAG+AGG | 0.596482 | 1.3:-71203817 | MS.gene33564:CDS |
| GAACATCTACAGTTTGTGAA+AGG | 0.597267 | 1.3:+71204180 | None:intergenic |
| AACAGTTCTGTTACTGATGG+AGG | 0.598319 | 1.3:+71203251 | None:intergenic |
| TACAACTCTTGTTAATCTGG+AGG | 0.605680 | 1.3:-71203771 | MS.gene33564:CDS |
| GATGCTTGTTAATGATTCAG+TGG | 0.627074 | 1.3:-71203849 | MS.gene33564:CDS |
| ACTTGAAAATTTGGTGCCAG+TGG | 0.629464 | 1.3:+71203890 | None:intergenic |
| ATGTCATGTTCTGACCATGA+TGG | 0.631046 | 1.3:+71201780 | None:intergenic |
| GCCCATCGCATTGAAAGAGA+GGG | 0.631250 | 1.3:-71203816 | MS.gene33564:CDS |
| AATGGTGATCAAATACTCGA+AGG | 0.635890 | 1.3:-71203218 | MS.gene33564:CDS |
| GTCAGAACATGACATTTGGG+AGG | 0.666903 | 1.3:-71201772 | MS.gene33564:CDS |
| CAGACAGCTCCTATAAGTGA+CGG | 0.667588 | 1.3:-71202472 | MS.gene33564:CDS |
| CCTCGAATACCAAACTGAGG+AGG | 0.678182 | 1.3:+71203665 | None:intergenic |
| AATCAGCCCATTCTAAAACG+TGG | 0.689169 | 1.3:-71201220 | MS.gene33564:CDS |
| GTATGATGAGACTATGAGTG+AGG | 0.699298 | 1.3:-71203738 | MS.gene33564:CDS |
| TCAAGAAAGAGTTTGACGGG+AGG | 0.714715 | 1.3:+71204158 | None:intergenic |
| TTTCCTCGAATACCAAACTG+AGG | 0.731623 | 1.3:+71203662 | None:intergenic |
| TGCTTGTTAATGATTCAGTG+GGG | 0.742138 | 1.3:-71203847 | MS.gene33564:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAATTTGTATTGAT+TGG | + | chr1.3:71202533-71202552 | None:intergenic | 10.0% |
| !!! | ATTTAAAATTTGTATTGATT+GGG | + | chr1.3:71202532-71202551 | None:intergenic | 10.0% |
| !!! | TTCATTTTTTATTTCATATT+AGG | - | chr1.3:71202105-71202124 | MS.gene33564:intron | 10.0% |
| !! | CATAAAATTAATATAAACGA+AGG | + | chr1.3:71203520-71203539 | None:intergenic | 15.0% |
| !! | TATACAAATTCTATCAAATT+TGG | - | chr1.3:71200705-71200724 | MS.gene33564:intron | 15.0% |
| !!! | GATAAAGATTTTCAATAAAA+AGG | + | chr1.3:71201765-71201784 | None:intergenic | 15.0% |
| !!! | TTATTTTATATTTCTTCATG+TGG | - | chr1.3:71202056-71202075 | MS.gene33564:intron | 15.0% |
| !!! | TTTTATTTCATATTAGGATT+GGG | - | chr1.3:71202111-71202130 | MS.gene33564:intron | 15.0% |
| !!! | TTTTTATTTCATATTAGGAT+TGG | - | chr1.3:71202110-71202129 | MS.gene33564:intron | 15.0% |
| !! | ATCCTATATAAATATGACAT+TGG | + | chr1.3:71202775-71202794 | None:intergenic | 20.0% |
| !! | TATAAGAAAAAACAGGATAT+TGG | - | chr1.3:71201170-71201189 | MS.gene33564:intron | 20.0% |
| !! | TTAGATTTAAACAAAAGTTG+TGG | + | chr1.3:71200733-71200752 | None:intergenic | 20.0% |
| !!! | AATAGTTTAAGATTGCAAAA+AGG | + | chr1.3:71203287-71203306 | None:intergenic | 20.0% |
| !!! | AGATTTTCAATAAAAAGGTA+TGG | + | chr1.3:71201760-71201779 | None:intergenic | 20.0% |
| !!! | ATATCCTGTTTTTTCTTATA+TGG | + | chr1.3:71201170-71201189 | None:intergenic | 20.0% |
| !!! | ATGAAAACAAATAGCAATTT+TGG | + | chr1.3:71203978-71203997 | None:intergenic | 20.0% |
| !!! | ATTACTTTCACATTTTGAAT+TGG | - | chr1.3:71203615-71203634 | MS.gene33564:CDS | 20.0% |
| !!! | CCTGGTTTTATAATATTTTT+GGG | + | chr1.3:71202369-71202388 | None:intergenic | 20.0% |
| !!! | CTAATATTTGGAATTTGTTT+TGG | - | chr1.3:71202647-71202666 | MS.gene33564:intron | 20.0% |
| !!! | CTGAAATTTTATATTGTCAA+AGG | + | chr1.3:71201288-71201307 | None:intergenic | 20.0% |
| !!! | TATCCTGTTTTTTCTTATAT+GGG | + | chr1.3:71201169-71201188 | None:intergenic | 20.0% |
| !!! | TCCTGGTTTTATAATATTTT+TGG | + | chr1.3:71202370-71202389 | None:intergenic | 20.0% |
| !!! | TTACTTTCACATTTTGAATT+GGG | - | chr1.3:71203616-71203635 | MS.gene33564:CDS | 20.0% |
| !!! | TTCTAATTATGTGTTTGTTT+TGG | - | chr1.3:71203797-71203816 | MS.gene33564:CDS | 20.0% |
| !!! | TTGTACGTATGTTATTTATT+GGG | + | chr1.3:71204039-71204058 | None:intergenic | 20.0% |
| !!! | TTTTGAAATGAACATTTCTA+TGG | + | chr1.3:71202673-71202692 | None:intergenic | 20.0% |
| !!! | TTTTTCTTATATGGGATTTA+AGG | + | chr1.3:71201161-71201180 | None:intergenic | 20.0% |
| ! | AAACCAATAAAGTCTAGAAA+TGG | + | chr1.3:71201880-71201899 | None:intergenic | 25.0% |
| ! | AAGTAATGCATAAATTTACC+TGG | + | chr1.3:71203602-71203621 | None:intergenic | 25.0% |
| ! | AATCCCATATAAGAAAAAAC+AGG | - | chr1.3:71201163-71201182 | MS.gene33564:intron | 25.0% |
| ! | ACACATAGTTACTAACAAAA+AGG | + | chr1.3:71201580-71201599 | None:intergenic | 25.0% |
| ! | ATGTAATGATTGTAATCTCT+AGG | - | chr1.3:71204168-71204187 | MS.gene33564:CDS | 25.0% |
| ! | CACATAGTTACTAACAAAAA+GGG | + | chr1.3:71201579-71201598 | None:intergenic | 25.0% |
| ! | CCCAAAAATATTATAAAACC+AGG | - | chr1.3:71202366-71202385 | MS.gene33564:intron | 25.0% |
| ! | CTGCTAAAAATTTCAAGAAA+GGG | + | chr1.3:71202318-71202337 | None:intergenic | 25.0% |
| ! | GACCAATGTCATATTTATAT+AGG | - | chr1.3:71202770-71202789 | MS.gene33564:intron | 25.0% |
| ! | GTAAATGGATACATATATAG+TGG | + | chr1.3:71203678-71203697 | None:intergenic | 25.0% |
| ! | TAAATCTATTTGTCAAATCC+AGG | - | chr1.3:71202597-71202616 | MS.gene33564:intron | 25.0% |
| ! | TCACTCTAAGCAAATAATAA+TGG | + | chr1.3:71201235-71201254 | None:intergenic | 25.0% |
| ! | TCAGATTTCATATCAGTAAA+GGG | + | chr1.3:71204202-71204221 | None:intergenic | 25.0% |
| ! | TCTGCTAAAAATTTCAAGAA+AGG | + | chr1.3:71202319-71202338 | None:intergenic | 25.0% |
| ! | TGAAATAAGCTTATGTGTTA+TGG | - | chr1.3:71202030-71202049 | MS.gene33564:intron | 25.0% |
| ! | TTCAGATTTCATATCAGTAA+AGG | + | chr1.3:71204203-71204222 | None:intergenic | 25.0% |
| !! | ATTCCATTTCTAGACTTTAT+TGG | - | chr1.3:71201874-71201893 | MS.gene33564:intron | 25.0% |
| !! | CTTGTACGTATGTTATTTAT+TGG | + | chr1.3:71204040-71204059 | None:intergenic | 25.0% |
| !! | CTTTAATTTCTAAAAGCAAC+GGG | - | chr1.3:71201669-71201688 | MS.gene33564:intron | 25.0% |
| !! | GCTTTAATTTCTAAAAGCAA+CGG | - | chr1.3:71201668-71201687 | MS.gene33564:intron | 25.0% |
| !! | TAGTAATGTTTTTCTTTGTC+AGG | - | chr1.3:71202705-71202724 | MS.gene33564:intron | 25.0% |
| !! | TCTTTATCTTCGATTTTCTT+TGG | - | chr1.3:71201777-71201796 | MS.gene33564:CDS | 25.0% |
| !! | TTTTCATCAGGAAAAGATTA+TGG | - | chr1.3:71203991-71204010 | MS.gene33564:CDS | 25.0% |
| !!! | AAAGAACTTTTTTGCAAAGT+TGG | + | chr1.3:71202990-71203009 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTTTGCAAAGTT+GGG | + | chr1.3:71202989-71203008 | None:intergenic | 25.0% |
| !!! | AATTGCTATTTGTTTTCATC+AGG | - | chr1.3:71203979-71203998 | MS.gene33564:CDS | 25.0% |
| !!! | GATTTGACAAAGTATTTTGT+AGG | + | chr1.3:71200578-71200597 | None:intergenic | 25.0% |
| !!! | GTTTTAGAGAAAACCAAAAA+AGG | + | chr1.3:71203342-71203361 | None:intergenic | 25.0% |
| !!! | TAACTTTTTTTCTTCAATGC+AGG | - | chr1.3:71201361-71201380 | MS.gene33564:intron | 25.0% |
| !!! | TGCTTTTAGAAATTAAAGCA+TGG | + | chr1.3:71201667-71201686 | None:intergenic | 25.0% |
| !!! | TTAAATTTTGTTTCCTACGA+TGG | - | chr1.3:71202546-71202565 | MS.gene33564:intron | 25.0% |
| !!! | TTTTTATTTCCATGATCACA+TGG | + | chr1.3:71202157-71202176 | None:intergenic | 25.0% |
| AAAGTTTATGCACTGAACTT+TGG | - | chr1.3:71201721-71201740 | MS.gene33564:intron | 30.0% | |
| AAGACCACAAACTTTGTAAA+TGG | + | chr1.3:71203693-71203712 | None:intergenic | 30.0% | |
| AGATAAATTATCTCACCTTG+CGG | + | chr1.3:71201497-71201516 | None:intergenic | 30.0% | |
| AGTTGTCTTGACTTTAGTAA+TGG | - | chr1.3:71201262-71201281 | MS.gene33564:CDS | 30.0% | |
| ATGGACAAAAAAGCAATTTC+AGG | - | chr1.3:71203476-71203495 | MS.gene33564:intron | 30.0% | |
| ATTAATGTTGTGATAATCCC+AGG | + | chr1.3:71203579-71203598 | None:intergenic | 30.0% | |
| CAACGTGACAAACAAATAAT+AGG | + | chr1.3:71201828-71201847 | None:intergenic | 30.0% | |
| CAATGTTAGGAAATATGACT+TGG | + | chr1.3:71203944-71203963 | None:intergenic | 30.0% | |
| CAGATTAACAAGAGTTGTAA+TGG | + | chr1.3:71200890-71200909 | None:intergenic | 30.0% | |
| CAGATTTCATATCAGTAAAG+GGG | + | chr1.3:71204201-71204220 | None:intergenic | 30.0% | |
| CATTACAACTCTTGTTAATC+TGG | - | chr1.3:71200888-71200907 | MS.gene33564:intron | 30.0% | |
| GAATAAACTAATCACACTCA+TGG | - | chr1.3:71203726-71203745 | MS.gene33564:CDS | 30.0% | |
| GATTATCACAACATTAATCC+AGG | - | chr1.3:71203581-71203600 | MS.gene33564:intron | 30.0% | |
| GGTAGTATAATTGCAATGTT+AGG | + | chr1.3:71203957-71203976 | None:intergenic | 30.0% | |
| GGTTGTGAAACTTGAAAATT+TGG | + | chr1.3:71200784-71200803 | None:intergenic | 30.0% | |
| GTATCCATTTACAAAGTTTG+TGG | - | chr1.3:71203686-71203705 | MS.gene33564:CDS | 30.0% | |
| TCCAAATATTAGTGAAAGCA+AGG | + | chr1.3:71202639-71202658 | None:intergenic | 30.0% | |
| TCTCAATTTGAGTAAATGCA+GGG | - | chr1.3:71203549-71203568 | MS.gene33564:intron | 30.0% | |
| TGATGTTCATTCAGATTACT+AGG | - | chr1.3:71201336-71201355 | MS.gene33564:intron | 30.0% | |
| TTAGAGAAAACCAAAAAAGG+AGG | + | chr1.3:71203339-71203358 | None:intergenic | 30.0% | |
| TTCTCAATTTGAGTAAATGC+AGG | - | chr1.3:71203548-71203567 | MS.gene33564:intron | 30.0% | |
| TTGTATTCTAATTCAGACTC+AGG | + | chr1.3:71201112-71201131 | None:intergenic | 30.0% | |
| ! | ATGCTTGTTAATGATTCAGT+GGG | - | chr1.3:71200814-71200833 | MS.gene33564:intron | 30.0% |
| ! | ATTCATCACAAGTGTTATTG+AGG | - | chr1.3:71202952-71202971 | MS.gene33564:intron | 30.0% |
| ! | ATTTTTGTTCAAATCTCAGG+AGG | + | chr1.3:71201611-71201630 | None:intergenic | 30.0% |
| ! | CAGATTTTTGTTCAAATCTC+AGG | + | chr1.3:71201614-71201633 | None:intergenic | 30.0% |
| ! | TACAAAATAGTTTTCTCGTG+AGG | + | chr1.3:71203165-71203184 | None:intergenic | 30.0% |
| ! | TACTTTGTCAAATCTTTTCC+TGG | - | chr1.3:71200584-71200603 | MS.gene33564:intron | 30.0% |
| ! | TCACATTTTGAATTGGGATT+GGG | - | chr1.3:71203622-71203641 | MS.gene33564:CDS | 30.0% |
| ! | TTCACATTTTGAATTGGGAT+TGG | - | chr1.3:71203621-71203640 | MS.gene33564:CDS | 30.0% |
| ! | TTGAATGTATCTAAAGTACC+TGG | + | chr1.3:71200537-71200556 | None:intergenic | 30.0% |
| ! | TTTAGTGTACAGCTTTTATG+AGG | + | chr1.3:71203037-71203056 | None:intergenic | 30.0% |
| ! | TTTTTCTTCAATGCAGGATT+AGG | - | chr1.3:71201367-71201386 | MS.gene33564:intron | 30.0% |
| ! | TTTTTCTTTGTCAGGAAGAT+GGG | - | chr1.3:71202713-71202732 | MS.gene33564:intron | 30.0% |
| !! | AGTTCTTTTGAAAATGTGAC+TGG | - | chr1.3:71203002-71203021 | MS.gene33564:intron | 30.0% |
| !! | TTGTTTTTCTTCAACCACAA+AGG | - | chr1.3:71202285-71202304 | MS.gene33564:intron | 30.0% |
| !!! | AGTTTTAAGAATTCCATCGT+AGG | + | chr1.3:71202562-71202581 | None:intergenic | 30.0% |
| !!! | GTTTTCTCTAAAACTCACTT+GGG | - | chr1.3:71203348-71203367 | MS.gene33564:intron | 30.0% |
| AAACGTGGAAGGATATATCA+TGG | - | chr1.3:71203457-71203476 | MS.gene33564:intron | 35.0% | |
| AACAGGATATTGGTGAGTTA+AGG | - | chr1.3:71201180-71201199 | MS.gene33564:intron | 35.0% | |
| AATGGTGATCAAATACTCGA+AGG | - | chr1.3:71201444-71201463 | MS.gene33564:intron | 35.0% | |
| AATTGTCTGCTGATGGTTTA+TGG | - | chr1.3:71202460-71202479 | MS.gene33564:CDS | 35.0% | |
| ACATGATTTACACTTGTGCA+GGG | - | chr1.3:71202821-71202840 | MS.gene33564:intron | 35.0% | |
| AGATCTAAATCAATGGCTGA+GGG | - | chr1.3:71203066-71203085 | MS.gene33564:intron | 35.0% | |
| AGCTGCCAAATATTCAGATT+GGG | - | chr1.3:71201065-71201084 | MS.gene33564:intron | 35.0% | |
| AGCTTCAAGAAAGAGTTTGA+CGG | + | chr1.3:71200511-71200530 | None:intergenic | 35.0% | |
| ATATAAACCAACCTACGAGT+GGG | + | chr1.3:71204108-71204127 | None:intergenic | 35.0% | |
| ATGGAGAAACTTCTCGAAAT+GGG | + | chr1.3:71202866-71202885 | None:intergenic | 35.0% | |
| ATGGTCAGAACATGACATTT+GGG | - | chr1.3:71202887-71202906 | MS.gene33564:intron | 35.0% | |
| CAAACAGACACATAAAAAGC+AGG | + | chr1.3:71201997-71202016 | None:intergenic | 35.0% | |
| CAAGATTTCACAAGGCAAAA+TGG | - | chr1.3:71201961-71201980 | MS.gene33564:intron | 35.0% | |
| CACTTTCTCAAGATTTCACA+AGG | - | chr1.3:71201953-71201972 | MS.gene33564:intron | 35.0% | |
| CCAAATATTCAGATTGGGTA+AGG | - | chr1.3:71201070-71201089 | MS.gene33564:intron | 35.0% | |
| CCTTACCCAATCTGAATATT+TGG | + | chr1.3:71201073-71201092 | None:intergenic | 35.0% | |
| GAACATCTACAGTTTGTGAA+AGG | + | chr1.3:71200485-71200504 | None:intergenic | 35.0% | |
| GAACTGTTGCTGTCTTATAA+TGG | - | chr1.3:71201426-71201445 | MS.gene33564:intron | 35.0% | |
| GACAAAAAAGCAATTTCAGG+TGG | - | chr1.3:71203479-71203498 | MS.gene33564:intron | 35.0% | |
| GACTCCTAGATCTAAATCAA+TGG | - | chr1.3:71203059-71203078 | MS.gene33564:intron | 35.0% | |
| GAGATATTGAGATAAAGTCC+TGG | + | chr1.3:71202387-71202406 | None:intergenic | 35.0% | |
| GCCTTGCTTTCACTAATATT+TGG | - | chr1.3:71202635-71202654 | MS.gene33564:intron | 35.0% | |
| TACAACTCTTGTTAATCTGG+AGG | - | chr1.3:71200891-71200910 | MS.gene33564:intron | 35.0% | |
| TAGATCTAAATCAATGGCTG+AGG | - | chr1.3:71203065-71203084 | MS.gene33564:intron | 35.0% | |
| TATATAAACCAACCTACGAG+TGG | + | chr1.3:71204109-71204128 | None:intergenic | 35.0% | |
| TCAAGGTTTCTCTTCAGTAA+TGG | - | chr1.3:71200456-71200475 | MS.gene33564:CDS | 35.0% | |
| TCTATTTGTCAAATCCAGGT+AGG | - | chr1.3:71202601-71202620 | MS.gene33564:intron | 35.0% | |
| TTGAGAAAGTGAGCATCAAA+TGG | + | chr1.3:71201944-71201963 | None:intergenic | 35.0% | |
| ! | ACATTTTGAATTGGGATTGG+GGG | - | chr1.3:71203624-71203643 | MS.gene33564:CDS | 35.0% |
| ! | ATGGAGAAAGCGATTTTTGA+AGG | - | chr1.3:71204010-71204029 | MS.gene33564:CDS | 35.0% |
| ! | CACATTTTGAATTGGGATTG+GGG | - | chr1.3:71203623-71203642 | MS.gene33564:CDS | 35.0% |
| ! | GATGCTTGTTAATGATTCAG+TGG | - | chr1.3:71200813-71200832 | MS.gene33564:intron | 35.0% |
| ! | GCTTTTTATGTGTCTGTTTG+TGG | - | chr1.3:71201997-71202016 | MS.gene33564:intron | 35.0% |
| ! | GTTTTTCTTTGTCAGGAAGA+TGG | - | chr1.3:71202712-71202731 | MS.gene33564:intron | 35.0% |
| ! | TACTAGCTTATCTACGAGTT+TGG | - | chr1.3:71203215-71203234 | MS.gene33564:CDS | 35.0% |
| ! | TGCTTGTTAATGATTCAGTG+GGG | - | chr1.3:71200815-71200834 | MS.gene33564:intron | 35.0% |
| ! | TGGAGAAAGCGATTTTTGAA+GGG | - | chr1.3:71204011-71204030 | MS.gene33564:CDS | 35.0% |
| !! | AATTTGTATTGATTGGGCAG+AGG | + | chr1.3:71202526-71202545 | None:intergenic | 35.0% |
| !! | ATGCTTCATGCTTGTTATTC+TGG | - | chr1.3:71200653-71200672 | MS.gene33564:intron | 35.0% |
| !! | CTTTTTCATTATTTGCCGCA+AGG | - | chr1.3:71201479-71201498 | MS.gene33564:intron | 35.0% |
| !! | GCAACATGTTGATAGTATTC+AGG | - | chr1.3:71203404-71203423 | MS.gene33564:intron | 35.0% |
| !! | TCAGCCATTGATTTAGATCT+AGG | + | chr1.3:71203066-71203085 | None:intergenic | 35.0% |
| !! | TGCTTCATGCTTGTTATTCT+GGG | - | chr1.3:71200654-71200673 | MS.gene33564:intron | 35.0% |
| !! | TGGTCTTGTTTGTGTAAATG+TGG | - | chr1.3:71202480-71202499 | MS.gene33564:CDS | 35.0% |
| !!! | AGATTTCAGTCCTCCTTTTT+TGG | - | chr1.3:71203326-71203345 | MS.gene33564:intron | 35.0% |
| !!! | ATCCTTCCACGTTTTAGAAT+GGG | + | chr1.3:71203451-71203470 | None:intergenic | 35.0% |
| !!! | ATCTTTTCCTGGTTTGTTTC+TGG | - | chr1.3:71200595-71200614 | MS.gene33564:intron | 35.0% |
| !!! | GGTTTTCTCTAAAACTCACT+TGG | - | chr1.3:71203347-71203366 | MS.gene33564:intron | 35.0% |
| !!! | TATCCTTCCACGTTTTAGAA+TGG | + | chr1.3:71203452-71203471 | None:intergenic | 35.0% |
| AAAGTGAGCATCAAATGGTC+AGG | + | chr1.3:71201939-71201958 | None:intergenic | 40.0% | |
| AAATAGCAAGCACATGTGAC+TGG | - | chr1.3:71202798-71202817 | MS.gene33564:intron | 40.0% | |
| AACAGTTCTGTTACTGATGG+AGG | + | chr1.3:71201414-71201433 | None:intergenic | 40.0% | |
| ACCTACGAGTGGGAAATATA+AGG | + | chr1.3:71204098-71204117 | None:intergenic | 40.0% | |
| ACCTTATATTTCCCACTCGT+AGG | - | chr1.3:71204094-71204113 | MS.gene33564:intron | 40.0% | |
| ACTAGTTGACGTATTATCCC+TGG | + | chr1.3:71202223-71202242 | None:intergenic | 40.0% | |
| ACTTATGTTCCTCCTCAGTT+TGG | - | chr1.3:71200988-71201007 | MS.gene33564:intron | 40.0% | |
| AGCAACAGTTCTGTTACTGA+TGG | + | chr1.3:71201417-71201436 | None:intergenic | 40.0% | |
| ATGTCATGTTCTGACCATGA+TGG | + | chr1.3:71202885-71202904 | None:intergenic | 40.0% | |
| CAATTTGAGTAAATGCAGGG+TGG | - | chr1.3:71203552-71203571 | MS.gene33564:intron | 40.0% | |
| CAGCTGCCAAATATTCAGAT+TGG | - | chr1.3:71201064-71201083 | MS.gene33564:intron | 40.0% | |
| CAGTTTGGTATTCGAGGAAA+TGG | - | chr1.3:71201003-71201022 | MS.gene33564:intron | 40.0% | |
| CATGGTCAGAACATGACATT+TGG | - | chr1.3:71202886-71202905 | MS.gene33564:intron | 40.0% | |
| CTCTTTCTTGAAGCTAATCC+AGG | - | chr1.3:71200516-71200535 | MS.gene33564:intron | 40.0% | |
| GAAGATCCTACTTCTTTGCT+GGG | - | chr1.3:71204062-71204081 | MS.gene33564:intron | 40.0% | |
| GACATGATTTACACTTGTGC+AGG | - | chr1.3:71202820-71202839 | MS.gene33564:intron | 40.0% | |
| GATGGAGAAACTTCTCGAAA+TGG | + | chr1.3:71202867-71202886 | None:intergenic | 40.0% | |
| GCTTCAAGAAAGAGTTTGAC+GGG | + | chr1.3:71200510-71200529 | None:intergenic | 40.0% | |
| GTATGATGAGACTATGAGTG+AGG | - | chr1.3:71200924-71200943 | MS.gene33564:intron | 40.0% | |
| GTGTTTGAATTGTCTGCTGA+TGG | - | chr1.3:71202453-71202472 | MS.gene33564:CDS | 40.0% | |
| TATATTTCCCACTCGTAGGT+TGG | - | chr1.3:71204098-71204117 | MS.gene33564:intron | 40.0% | |
| TGAAGATCCTACTTCTTTGC+TGG | - | chr1.3:71204061-71204080 | MS.gene33564:intron | 40.0% | |
| TGTTAATGATTCAGTGGGGA+AGG | - | chr1.3:71200819-71200838 | MS.gene33564:intron | 40.0% | |
| TTAACAAGCATCTGCAATGC+AGG | + | chr1.3:71200805-71200824 | None:intergenic | 40.0% | |
| TTCGAGAAGTTTCTCCATCA+TGG | - | chr1.3:71202868-71202887 | MS.gene33564:intron | 40.0% | |
| TTGGGATCTAATGTCATTCC+AGG | - | chr1.3:71203366-71203385 | MS.gene33564:intron | 40.0% | |
| TTGGGATTCAGATGATGAGA+AGG | - | chr1.3:71202129-71202148 | MS.gene33564:intron | 40.0% | |
| TTTCCTCGAATACCAAACTG+AGG | + | chr1.3:71201003-71201022 | None:intergenic | 40.0% | |
| ! | GTATTCAGGTTCCAACAGAA+TGG | - | chr1.3:71203418-71203437 | MS.gene33564:intron | 40.0% |
| ! | TACTTTTCTAGACCACAGTC+TGG | + | chr1.3:71203109-71203128 | None:intergenic | 40.0% |
| !! | AATCAGCCCATTCTAAAACG+TGG | - | chr1.3:71203442-71203461 | MS.gene33564:intron | 40.0% |
| !! | ACTTGAAAATTTGGTGCCAG+TGG | + | chr1.3:71200775-71200794 | None:intergenic | 40.0% |
| ACCCTCTCTTTCAATGCGAT+GGG | + | chr1.3:71200850-71200869 | None:intergenic | 45.0% | |
| ATAAGTGACGGTGTTCTTCC+AGG | - | chr1.3:71202202-71202221 | MS.gene33564:intron | 45.0% | |
| ATGCAGGATTAGGAAGACTC+TGG | - | chr1.3:71201377-71201396 | MS.gene33564:intron | 45.0% | |
| ATGTCATTCCAGGTAGCTTG+AGG | - | chr1.3:71203376-71203395 | MS.gene33564:intron | 45.0% | |
| ATGTGTACTGAACGTGCGTT+TGG | + | chr1.3:71203900-71203919 | None:intergenic | 45.0% | |
| ATTAAGTCACCACCAGACTG+TGG | - | chr1.3:71203094-71203113 | MS.gene33564:intron | 45.0% | |
| CAGACAGCTCCTATAAGTGA+CGG | - | chr1.3:71202190-71202209 | MS.gene33564:intron | 45.0% | |
| CGTCAACTAGTGCTTGAGTA+TGG | - | chr1.3:71202232-71202251 | MS.gene33564:intron | 45.0% | |
| CTAGATCCCAGCAAAGAAGT+AGG | + | chr1.3:71204071-71204090 | None:intergenic | 45.0% | |
| GGAAGAACACCGTCACTTAT+AGG | + | chr1.3:71202202-71202221 | None:intergenic | 45.0% | |
| GTCAGAACATGACATTTGGG+AGG | - | chr1.3:71202890-71202909 | MS.gene33564:intron | 45.0% | |
| GTGAAAGCAAGGCTCTCTTA+TGG | + | chr1.3:71202628-71202647 | None:intergenic | 45.0% | |
| TAAGTGACGGTGTTCTTCCA+GGG | - | chr1.3:71202203-71202222 | MS.gene33564:intron | 45.0% | |
| TCAAGAAAGAGTTTGACGGG+AGG | + | chr1.3:71200507-71200526 | None:intergenic | 45.0% | |
| TCCAACCACGTTTAGGTGTT+AGG | + | chr1.3:71201640-71201659 | None:intergenic | 45.0% | |
| TCGAGGAAATGGTGCACATT+TGG | - | chr1.3:71201014-71201033 | MS.gene33564:intron | 45.0% | |
| TCTTAAACGCACGTTCATGG+TGG | + | chr1.3:71203830-71203849 | None:intergenic | 45.0% | |
| TGGACAATCCAACCACGTTT+AGG | + | chr1.3:71201647-71201666 | None:intergenic | 45.0% | |
| TGTTGCCTAACACCTAAACG+TGG | - | chr1.3:71201632-71201651 | MS.gene33564:intron | 45.0% | |
| TTTGAATTGGGATTGGGGGA+GGG | - | chr1.3:71203628-71203647 | MS.gene33564:CDS | 45.0% | |
| ! | GAAAGGGCATAGTTCCTTTG+TGG | + | chr1.3:71202302-71202321 | None:intergenic | 45.0% |
| ! | TTTTCTAGACCACAGTCTGG+TGG | + | chr1.3:71203106-71203125 | None:intergenic | 45.0% |
| ! | TTTTGAATTGGGATTGGGGG+AGG | - | chr1.3:71203627-71203646 | MS.gene33564:CDS | 45.0% |
| !! | AGCCCATTCTAAAACGTGGA+AGG | - | chr1.3:71203446-71203465 | MS.gene33564:intron | 45.0% |
| !! | TGACTTGGTGCCTGTTTGTT+TGG | + | chr1.3:71203929-71203948 | None:intergenic | 45.0% |
| !!! | TAATTTATTTCTATAATTTT+TGG | + | chr1.3:71202750-71202769 | None:intergenic | 5.0% |
| ACACTTGTGCAGGGTATGCA+GGG | - | chr1.3:71202830-71202849 | MS.gene33564:intron | 50.0% | |
| ACATCAGCACTACAAGCAGC+AGG | + | chr1.3:71201322-71201341 | None:intergenic | 50.0% | |
| ACATCCACCGCCAAACAAAC+AGG | - | chr1.3:71203916-71203935 | MS.gene33564:CDS | 50.0% | |
| ACCTGGACCAGAAACAAACC+AGG | + | chr1.3:71200605-71200624 | None:intergenic | 50.0% | |
| AGTAAATGCAGGGTGGACCT+GGG | - | chr1.3:71203559-71203578 | MS.gene33564:intron | 50.0% | |
| AGTTGTAATGGCCAGCTCCT+TGG | + | chr1.3:71200878-71200897 | None:intergenic | 50.0% | |
| CCTCCTCAGTTTGGTATTCG+AGG | - | chr1.3:71200997-71201016 | MS.gene33564:intron | 50.0% | |
| CCTCGAATACCAAACTGAGG+AGG | + | chr1.3:71201000-71201019 | None:intergenic | 50.0% | |
| CGCTCTTAAACGCACGTTCA+TGG | + | chr1.3:71203833-71203852 | None:intergenic | 50.0% | |
| GACCCTCTCTTTCAATGCGA+TGG | + | chr1.3:71200851-71200870 | None:intergenic | 50.0% | |
| GAGAAGGCTCCATGTGATCA+TGG | - | chr1.3:71202145-71202164 | MS.gene33564:intron | 50.0% | |
| GCCCATCGCATTGAAAGAGA+GGG | - | chr1.3:71200846-71200865 | MS.gene33564:intron | 50.0% | |
| GCCTAACACCTAAACGTGGT+TGG | - | chr1.3:71201636-71201655 | MS.gene33564:intron | 50.0% | |
| TACACTTGTGCAGGGTATGC+AGG | - | chr1.3:71202829-71202848 | MS.gene33564:intron | 50.0% | |
| TGCAAAAGCCTCAAGCTACC+TGG | + | chr1.3:71203387-71203406 | None:intergenic | 50.0% | |
| TGCCCATCGCATTGAAAGAG+AGG | - | chr1.3:71200845-71200864 | MS.gene33564:intron | 50.0% | |
| TGGGCTGATTGCCATTCTGT+TGG | + | chr1.3:71203432-71203451 | None:intergenic | 50.0% | |
| TGGTGCACATTTGGCTGTTG+CGG | - | chr1.3:71201023-71201042 | MS.gene33564:intron | 50.0% | |
| ! | ATTTGGCTGTTGCGGGCTAT+GGG | - | chr1.3:71201031-71201050 | MS.gene33564:intron | 50.0% |
| ! | GAAAGAGAGGGTCGATTCCA+AGG | - | chr1.3:71200858-71200877 | MS.gene33564:intron | 50.0% |
| !! | ACGTGCGTTTAAGAGCGCTT+TGG | - | chr1.3:71203836-71203855 | MS.gene33564:CDS | 50.0% |
| !! | CTTGGTGCCTGTTTGTTTGG+CGG | + | chr1.3:71203926-71203945 | None:intergenic | 50.0% |
| !! | TCCTGGTTTGTTTCTGGTCC+AGG | - | chr1.3:71200601-71200620 | MS.gene33564:intron | 50.0% |
| CGTGTTGTCGTGTAAGCACC+TGG | + | chr1.3:71200622-71200641 | None:intergenic | 55.0% | |
| GAGTAAATGCAGGGTGGACC+TGG | - | chr1.3:71203558-71203577 | MS.gene33564:intron | 55.0% | |
| GGCTCTCTTATGGACCTACC+TGG | + | chr1.3:71202618-71202637 | None:intergenic | 55.0% | |
| GGTGCACATTTGGCTGTTGC+GGG | - | chr1.3:71201024-71201043 | MS.gene33564:intron | 55.0% | |
| TGCAGGGTATGCAGGGATGA+AGG | - | chr1.3:71202837-71202856 | MS.gene33564:intron | 55.0% | |
| ! | CATTTGGCTGTTGCGGGCTA+TGG | - | chr1.3:71201030-71201049 | MS.gene33564:intron | 55.0% |
| GGTGCCTGTTTGTTTGGCGG+TGG | + | chr1.3:71203923-71203942 | None:intergenic | 60.0% | |
| TGCTGCAAGTGTGCTGCCAC+TGG | - | chr1.3:71200756-71200775 | MS.gene33564:intron | 60.0% | |
| ! | GAGGGTCGATTCCAAGGAGC+TGG | - | chr1.3:71200864-71200883 | MS.gene33564:intron | 60.0% |
| ! | TGGCTGTTGCGGGCTATGGG+AGG | - | chr1.3:71201034-71201053 | MS.gene33564:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 71200447 | 71204237 | 71200447 | ID=MS.gene33564 |
| chr1.3 | mRNA | 71200447 | 71204237 | 71200447 | ID=MS.gene33564.t1;Parent=MS.gene33564 |
| chr1.3 | exon | 71204147 | 71204237 | 71204147 | ID=MS.gene33564.t1.exon1;Parent=MS.gene33564.t1 |
| chr1.3 | CDS | 71204147 | 71204237 | 71204147 | ID=cds.MS.gene33564.t1;Parent=MS.gene33564.t1 |
| chr1.3 | exon | 71203593 | 71204061 | 71203593 | ID=MS.gene33564.t1.exon2;Parent=MS.gene33564.t1 |
| chr1.3 | CDS | 71203593 | 71204061 | 71203593 | ID=cds.MS.gene33564.t1;Parent=MS.gene33564.t1 |
| chr1.3 | exon | 71203184 | 71203301 | 71203184 | ID=MS.gene33564.t1.exon3;Parent=MS.gene33564.t1 |
| chr1.3 | CDS | 71203184 | 71203301 | 71203184 | ID=cds.MS.gene33564.t1;Parent=MS.gene33564.t1 |
| chr1.3 | exon | 71202436 | 71202557 | 71202436 | ID=MS.gene33564.t1.exon4;Parent=MS.gene33564.t1 |
| chr1.3 | CDS | 71202436 | 71202557 | 71202436 | ID=cds.MS.gene33564.t1;Parent=MS.gene33564.t1 |
| chr1.3 | exon | 71201757 | 71201842 | 71201757 | ID=MS.gene33564.t1.exon5;Parent=MS.gene33564.t1 |
| chr1.3 | CDS | 71201757 | 71201842 | 71201757 | ID=cds.MS.gene33564.t1;Parent=MS.gene33564.t1 |
| chr1.3 | exon | 71201187 | 71201296 | 71201187 | ID=MS.gene33564.t1.exon6;Parent=MS.gene33564.t1 |
| chr1.3 | CDS | 71201187 | 71201296 | 71201187 | ID=cds.MS.gene33564.t1;Parent=MS.gene33564.t1 |
| chr1.3 | exon | 71201082 | 71201114 | 71201082 | ID=MS.gene33564.t1.exon7;Parent=MS.gene33564.t1 |
| chr1.3 | CDS | 71201082 | 71201114 | 71201082 | ID=cds.MS.gene33564.t1;Parent=MS.gene33564.t1 |
| chr1.3 | exon | 71200447 | 71200494 | 71200447 | ID=MS.gene33564.t1.exon8;Parent=MS.gene33564.t1 |
| chr1.3 | CDS | 71200447 | 71200494 | 71200447 | ID=cds.MS.gene33564.t1;Parent=MS.gene33564.t1 |
| Gene Sequence |
| Protein sequence |
