AlfalfaGEDB | MS.gene33990

M. sativa cultivar XinJiangDaYe / MS.gene33990

KEGG: K02435
GO: GO:0006450 GO:0008150 GO:0065007 GO:0065008
PFAM: PF02686.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33990.t1	XP_003591983.1	94.2	138	4	2	1	138	1	134	4.20E-62	247.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33990.t1	D7STK2	67.0	106	34	1	34	138	32	137	3.5e-33	142.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33990.t1	G7I9N7	94.2	138	4	2	1	138	1	134	3.0e-62	247.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049491	MS.gene33990	0.804684	1.92E-49	-1.69E-46
MS.gene049614	MS.gene33990	0.802016	6.85E-49	-1.69E-46
MS.gene049760	MS.gene33990	0.806736	7.12E-50	-1.69E-46
MS.gene050076	MS.gene33990	0.828947	6.77E-55	-1.69E-46
MS.gene050099	MS.gene33990	0.865013	8.03E-65	-1.69E-46
MS.gene050301	MS.gene33990	0.809455	1.88E-50	-1.69E-46
MS.gene050397	MS.gene33990	0.810558	1.09E-50	-1.69E-46
MS.gene050529	MS.gene33990	0.813185	2.91E-51	-1.69E-46
MS.gene050767	MS.gene33990	0.835848	1.32E-56	-1.69E-46
MS.gene050770	MS.gene33990	0.840671	7.56E-58	-1.69E-46
MS.gene05101	MS.gene33990	0.84181	3.79E-58	-1.69E-46
MS.gene051471	MS.gene33990	0.846001	2.86E-59	-1.69E-46
MS.gene052078	MS.gene33990	0.862588	4.56E-64	-1.69E-46
MS.gene052178	MS.gene33990	0.805313	1.42E-49	-1.69E-46
MS.gene052310	MS.gene33990	0.839617	1.42E-57	-1.69E-46
MS.gene052326	MS.gene33990	0.835681	1.46E-56	-1.69E-46
MS.gene053322	MS.gene33990	0.814758	1.31E-51	-1.69E-46
MS.gene053557	MS.gene33990	0.800797	1.22E-48	-1.69E-46
MS.gene054376	MS.gene33990	0.844059	9.56E-59	-1.69E-46
MS.gene05455	MS.gene33990	0.802357	5.83E-49	-1.69E-46
MS.gene054802	MS.gene33990	0.859249	4.71E-63	-1.69E-46
MS.gene054803	MS.gene33990	0.86063	1.81E-63	-1.69E-46
MS.gene054804	MS.gene33990	0.859827	3.16E-63	-1.69E-46
MS.gene055254	MS.gene33990	0.829599	4.70E-55	-1.69E-46
MS.gene055277	MS.gene33990	0.836584	8.59E-57	-1.69E-46
MS.gene055390	MS.gene33990	0.801568	8.47E-49	-1.69E-46
MS.gene055397	MS.gene33990	0.800662	1.30E-48	-1.69E-46
MS.gene055422	MS.gene33990	0.832108	1.14E-55	-1.69E-46
MS.gene055428	MS.gene33990	0.814318	1.64E-51	-1.69E-46
MS.gene055896	MS.gene33990	0.830919	2.24E-55	-1.69E-46
MS.gene056410	MS.gene33990	0.803106	4.08E-49	-1.69E-46
MS.gene056612	MS.gene33990	0.810819	9.53E-51	-1.69E-46
MS.gene056796	MS.gene33990	0.804195	2.43E-49	-1.69E-46
MS.gene057123	MS.gene33990	0.820994	5.11E-53	-1.69E-46
MS.gene057129	MS.gene33990	0.803311	3.70E-49	-1.69E-46
MS.gene057439	MS.gene33990	0.800831	1.20E-48	-1.69E-46
MS.gene05811	MS.gene33990	0.813921	2.00E-51	-1.69E-46
MS.gene058293	MS.gene33990	0.823643	1.24E-53	-1.69E-46
MS.gene058660	MS.gene33990	0.846686	1.86E-59	-1.69E-46
MS.gene05907	MS.gene33990	0.800385	1.48E-48	-1.69E-46
MS.gene059326	MS.gene33990	0.938552	5.57E-99	-1.69E-46
MS.gene059536	MS.gene33990	0.812177	4.83E-51	-1.69E-46
MS.gene059676	MS.gene33990	0.823987	1.03E-53	-1.69E-46
MS.gene059692	MS.gene33990	0.806816	6.84E-50	-1.69E-46
MS.gene059894	MS.gene33990	0.82453	7.68E-54	-1.69E-46
MS.gene059960	MS.gene33990	0.85633	3.46E-62	-1.69E-46
MS.gene06090	MS.gene33990	0.803715	3.05E-49	-1.69E-46
MS.gene061049	MS.gene33990	0.806064	9.86E-50	-1.69E-46
MS.gene061200	MS.gene33990	0.813729	2.21E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33990.t1	MTR_1g095920	94.203	138	4	2	1	138	1	134	1.11e-89	256

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33990.t1	AT4G32915	62.366	93	34	1	45	136	61	153	6.56e-38	126

Find 35 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTGAGAGCACCTGCTCTTA+TGG	0.251754	1.2:+72570142	None:intergenic
CACCGTTGATCAAATGTTTC+AGG	0.262067	1.2:+72568583	None:intergenic
TAGTCCACATTTAGGACTTT+TGG	0.264895	1.2:+72568429	None:intergenic
TTATTCCAGGTTGAAGAATT+TGG	0.268843	1.2:-72570584	MS.gene33990:intron
ATGTAAGGCTCCTCATAGTT+TGG	0.335054	1.2:+72568459	None:intergenic
GACAATGATGATAACGATAA+TGG	0.386635	1.2:+72570824	None:intergenic
TTATGGAGGGCTCAACGCTT+TGG	0.387176	1.2:+72570159	None:intergenic
CCTAAAATTCAGCAGGTGAT+AGG	0.408712	1.2:-72570560	MS.gene33990:CDS
TGTCAGGTTTGGACAGCTGC+AGG	0.412387	1.2:-72570192	MS.gene33990:intron
ACCTCCGAATGTGTCTCATT+TGG	0.426635	1.2:-72570720	MS.gene33990:CDS
AGCAACTCTAGTCCACATTT+AGG	0.432553	1.2:+72568421	None:intergenic
AAATGGGAATAACCTCAGTT+GGG	0.447493	1.2:+72570672	None:intergenic
AAAATGGGAATAACCTCAGT+TGG	0.458590	1.2:+72570671	None:intergenic
CGGAGGTTCAAGAGAGGAAG+AGG	0.471227	1.2:+72570736	None:intergenic
TTTGCCAAATGAGACACATT+CGG	0.492233	1.2:+72570716	None:intergenic
TGGAGGGCTCAACGCTTTGG+AGG	0.493750	1.2:+72570162	None:intergenic
GAAACTGTAACAACTTGTGT+TGG	0.494807	1.2:+72570789	None:intergenic
GAGAGCACCTGCTCTTATGG+AGG	0.507859	1.2:+72570145	None:intergenic
CGCTTCTATTCCAAACTATG+AGG	0.512037	1.2:-72568469	MS.gene33990:CDS
ATTTGGTCCTAAAATTCAGC+AGG	0.517843	1.2:-72570567	MS.gene33990:CDS
ACAAGTTGTTACAGTTTCGT+AGG	0.531872	1.2:-72570784	MS.gene33990:CDS
AGAGCACCTGCTCTTATGGA+GGG	0.536053	1.2:+72570146	None:intergenic
AAATTCAGCAGGTGATAGGC+TGG	0.554955	1.2:-72570556	MS.gene33990:intron
GTTGAGCCCTCCATAAGAGC+AGG	0.560192	1.2:-72570152	MS.gene33990:intron
CACCTGAAACATTTGATCAA+CGG	0.566695	1.2:-72568585	MS.gene33990:intron
GTTTGGAATAGAAGCGAGGA+TGG	0.592379	1.2:+72568476	None:intergenic
CACATTCGGAGGTTCAAGAG+AGG	0.598889	1.2:+72570730	None:intergenic
TAGAATTTAAGGAAGATGAG+TGG	0.601441	1.2:-72570872	None:intergenic
GTCAGGTTTGGACAGCTGCA+GGG	0.601581	1.2:-72570191	MS.gene33990:intron
AGTTCCAAAAGTCCTAAATG+TGG	0.611769	1.2:-72568433	MS.gene33990:CDS
AATGGGAATAACCTCAGTTG+GGG	0.623565	1.2:+72570673	None:intergenic
GCCAAATGAGACACATTCGG+AGG	0.666539	1.2:+72570719	None:intergenic
GGCAAAGTGTTGTTACTCAG+AGG	0.669633	1.2:-72570851	MS.gene33990:CDS
CATAGTTTGGAATAGAAGCG+AGG	0.676889	1.2:+72568472	None:intergenic
TATCTCTCTTACCCCAACTG+AGG	0.701029	1.2:-72570684	MS.gene33990:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCACTTAATATATTAAATAA+TGG	+	chr1.2:72570522-72570541	None:intergenic	10.0%
!!	TGAAAAGAAAAAAAAAAAAT+GGG	+	chr1.2:72568632-72568651	None:intergenic	10.0%
!!	TTATTCATTATTTGTAAATT+GGG	-	chr1.2:72570731-72570750	MS.gene33990:CDS	10.0%
!!	TTGAAAAGAAAAAAAAAAAA+TGG	+	chr1.2:72568633-72568652	None:intergenic	10.0%
!!	TTTATTCATTATTTGTAAAT+TGG	-	chr1.2:72570730-72570749	MS.gene33990:CDS	10.0%
!!!	AAAACTCTTTTTATTTTATT+TGG	-	chr1.2:72568764-72568783	MS.gene33990:intron	10.0%
!!!	GTTTTTTTTTTTTTTTACAA+AGG	-	chr1.2:72570395-72570414	MS.gene33990:intron	10.0%
!!!	TTTAAAATTTCTAATAGTAA+TGG	-	chr1.2:72568669-72568688	MS.gene33990:intron	10.0%
!!!	TTTATTTTATCATAAACAAA+GGG	-	chr1.2:72570450-72570469	MS.gene33990:intron	10.0%
!!!	TTTTATAGTAATTTTATGAT+AGG	-	chr1.2:72568791-72568810	MS.gene33990:intron	10.0%
!!	ATATTTGTATTTCAAAAGTA+AGG	+	chr1.2:72569251-72569270	None:intergenic	15.0%
!!	TTCATCATTGAAATAAAAAA+TGG	-	chr1.2:72569471-72569490	MS.gene33990:intron	15.0%
!!	TTGTTTATGATAAAATAAAG+TGG	+	chr1.2:72570449-72570468	None:intergenic	15.0%
!!!	AAATTATGATGCTTTTATTT+AGG	-	chr1.2:72569797-72569816	MS.gene33990:intron	15.0%
!!!	AATAATGGAAATTTATTGTA+AGG	+	chr1.2:72570507-72570526	None:intergenic	15.0%
!!!	ATAATGGAAATTTATTGTAA+GGG	+	chr1.2:72570506-72570525	None:intergenic	15.0%
!!!	ATATTTTATATTTCATACAG+TGG	-	chr1.2:72570365-72570384	MS.gene33990:intron	15.0%
!!!	CTTTATTTTATCATAAACAA+AGG	-	chr1.2:72570449-72570468	MS.gene33990:intron	15.0%
!!!	TTGAAATACAAATATTTTCA+TGG	-	chr1.2:72569256-72569275	MS.gene33990:intron	15.0%
!!	GAAATGAGAAATTAGAATAT+TGG	+	chr1.2:72569170-72569189	None:intergenic	20.0%
!!!	AATTTTTTTTAGTGCAAAGT+CGG	-	chr1.2:72570103-72570122	MS.gene33990:intron	20.0%
!!!	ATTTTATGATAGGATAATTG+AGG	-	chr1.2:72568801-72568820	MS.gene33990:intron	20.0%
!!!	TCAATCTAAATTTGAAGTTT+TGG	+	chr1.2:72569067-72569086	None:intergenic	20.0%
!	ACTCATTTAAAAAACGTTCA+TGG	+	chr1.2:72570581-72570600	None:intergenic	25.0%
!	TATTGTATGTTAGTTGTTCA+TGG	-	chr1.2:72569305-72569324	MS.gene33990:intron	25.0%
!	TGTATTTCAAAAGTAAGGTT+CGG	+	chr1.2:72569246-72569265	None:intergenic	25.0%
!!	CTGAAAACTATGTTGTTTAT+GGG	-	chr1.2:72569701-72569720	MS.gene33990:intron	25.0%
!!	TACAAATATTTTCATGGAGA+TGG	-	chr1.2:72569262-72569281	MS.gene33990:intron	25.0%
!!	TCTGAAAACTATGTTGTTTA+TGG	-	chr1.2:72569700-72569719	MS.gene33990:intron	25.0%
!!!	ACTTTTGGAACTTTAATGTA+AGG	+	chr1.2:72570844-72570863	None:intergenic	25.0%
!!!	ATGAACGTTTTTTAAATGAG+TGG	-	chr1.2:72570580-72570599	MS.gene33990:intron	25.0%
!!!	GCTTAACATTTTGTTTCTAA+AGG	-	chr1.2:72569039-72569058	MS.gene33990:intron	25.0%
	AAATGAGTGGTAGAAAACAT+TGG	-	chr1.2:72570593-72570612	MS.gene33990:intron	30.0%
	ACGTTCATGGAATTAAAATC+AGG	+	chr1.2:72570568-72570587	None:intergenic	30.0%
	ATCATAAACAAAGGGAAGAA+AGG	-	chr1.2:72570458-72570477	MS.gene33990:intron	30.0%
	ATGAGAATCATAAGGTTGAA+AGG	+	chr1.2:72569503-72569522	None:intergenic	30.0%
	ATTAGAGAAACTCCAAAACA+AGG	+	chr1.2:72569197-72569216	None:intergenic	30.0%
	ATTGCTACATGCTAAACAAA+AGG	+	chr1.2:72569439-72569458	None:intergenic	30.0%
	CAAACACTAAATCCTAAATC+TGG	+	chr1.2:72569774-72569793	None:intergenic	30.0%
	CGAGAAGAAAGCAAATAATA+TGG	+	chr1.2:72570301-72570320	None:intergenic	30.0%
	CTAAGATTGCAAACACAAAT+AGG	-	chr1.2:72569528-72569547	MS.gene33990:intron	30.0%
	GTTTATTAACTCTTACACGT+AGG	-	chr1.2:72569614-72569633	MS.gene33990:intron	30.0%
	TAAACTATCAGTTATCTCAC+AGG	+	chr1.2:72569953-72569972	None:intergenic	30.0%
	TAGTCACTATGAGAATCATA+AGG	+	chr1.2:72569511-72569530	None:intergenic	30.0%
	TAGTTCAGTTCATACATTTC+TGG	+	chr1.2:72569370-72569389	None:intergenic	30.0%
	TATGTTAGTTGTTCATGGTT+TGG	-	chr1.2:72569310-72569329	MS.gene33990:intron	30.0%
!	AACAACTTGTGTTGGATTTT+CGG	+	chr1.2:72568491-72568510	None:intergenic	30.0%
!	ACAAAGGAGCAAATTTTCTA+GGG	-	chr1.2:72570411-72570430	MS.gene33990:intron	30.0%
!	GACAATGATGATAACGATAA+TGG	+	chr1.2:72568464-72568483	None:intergenic	30.0%
!	TACAAAGGAGCAAATTTTCT+AGG	-	chr1.2:72570410-72570429	MS.gene33990:intron	30.0%
!	TGTTTTCAGTTCATGAATGA+AGG	+	chr1.2:72570197-72570216	None:intergenic	30.0%
!	TTATTCCAGGTTGAAGAATT+TGG	-	chr1.2:72568701-72568720	MS.gene33990:intron	30.0%
!!	CTCATTTCATATCCTTGTTT+TGG	-	chr1.2:72569182-72569201	MS.gene33990:intron	30.0%
!!	TTTAGATTGATTTGTGTGTC+AGG	-	chr1.2:72569077-72569096	MS.gene33990:intron	30.0%
!!!	TATTTTAACAAACAGGTGGT+GGG	+	chr1.2:72568852-72568871	None:intergenic	30.0%
	AAAATGGGAATAACCTCAGT+TGG	+	chr1.2:72568617-72568636	None:intergenic	35.0%
	AAACAACATGAATCCAGTGT+TGG	+	chr1.2:72568897-72568916	None:intergenic	35.0%
	AAATGGGAATAACCTCAGTT+GGG	+	chr1.2:72568616-72568635	None:intergenic	35.0%
	AACAAAGGGAAGAAAGGAAT+AGG	-	chr1.2:72570464-72570483	MS.gene33990:intron	35.0%
	AACACTGGATTCATGTTGTT+TGG	-	chr1.2:72568896-72568915	MS.gene33990:intron	35.0%
	ACAAAGGGAAGAAAGGAATA+GGG	-	chr1.2:72570465-72570484	MS.gene33990:intron	35.0%
	ACAAGTTGTTACAGTTTCGT+AGG	-	chr1.2:72568501-72568520	MS.gene33990:intron	35.0%
	ACATCCATGCTAACAAACAT+TGG	+	chr1.2:72568924-72568943	None:intergenic	35.0%
	AGTTCCAAAAGTCCTAAATG+TGG	-	chr1.2:72570852-72570871	MS.gene33990:CDS	35.0%
	ATAGATTGCTATCCTTGACA+GGG	-	chr1.2:72570783-72570802	MS.gene33990:CDS	35.0%
	ATGGTGATTCATGTTATTCC+AGG	-	chr1.2:72568688-72568707	MS.gene33990:intron	35.0%
	ATTTGGTCCTAAAATTCAGC+AGG	-	chr1.2:72568718-72568737	MS.gene33990:intron	35.0%
	CACCTGAAACATTTGATCAA+CGG	-	chr1.2:72570700-72570719	MS.gene33990:CDS	35.0%
	GAAACTGTAACAACTTGTGT+TGG	+	chr1.2:72568499-72568518	None:intergenic	35.0%
	GTTTGTGACATTCCAGATTT+AGG	-	chr1.2:72569759-72569778	MS.gene33990:intron	35.0%
	TTGGTGCAAATTGTTCTTTC+CGG	-	chr1.2:72570012-72570031	MS.gene33990:intron	35.0%
	TTGTGCTGAACTGTACAAAA+TGG	-	chr1.2:72570077-72570096	MS.gene33990:intron	35.0%
	TTTGCCAAATGAGACACATT+CGG	+	chr1.2:72568572-72568591	None:intergenic	35.0%
!	ACACTGGATTCATGTTGTTT+GGG	-	chr1.2:72568897-72568916	MS.gene33990:intron	35.0%
!	GAATCCAGTGTTGGAATAAA+AGG	+	chr1.2:72568888-72568907	None:intergenic	35.0%
!	TAGAAAACATTGGTGCTTGT+TGG	-	chr1.2:72570603-72570622	MS.gene33990:intron	35.0%
!!	ATTGATTTGTGTGTCAGGTT+TGG	-	chr1.2:72569082-72569101	MS.gene33990:intron	35.0%
!!	ATTTCTGGTTCAGTTTCGTT+CGG	+	chr1.2:72569355-72569374	None:intergenic	35.0%
!!	TAGTCCACATTTAGGACTTT+TGG	+	chr1.2:72570859-72570878	None:intergenic	35.0%
!!!	GAAGGGGTATTTTAACAAAC+AGG	+	chr1.2:72568859-72568878	None:intergenic	35.0%
!!!	GTATTTTAACAAACAGGTGG+TGG	+	chr1.2:72568853-72568872	None:intergenic	35.0%
	AATGGGAATAACCTCAGTTG+GGG	+	chr1.2:72568615-72568634	None:intergenic	40.0%
	AGCCTACCAACTCATAACAA+GGG	+	chr1.2:72570170-72570189	None:intergenic	40.0%
	ATGTAAGGCTCCTCATAGTT+TGG	+	chr1.2:72570829-72570848	None:intergenic	40.0%
	CACCGTTGATCAAATGTTTC+AGG	+	chr1.2:72570705-72570724	None:intergenic	40.0%
	CCTAAAATTCAGCAGGTGAT+AGG	-	chr1.2:72568725-72568744	MS.gene33990:intron	40.0%
	CGCTTCTATTCCAAACTATG+AGG	-	chr1.2:72570816-72570835	MS.gene33990:CDS	40.0%
	GAGTTACTGACATGCTACAA+AGG	+	chr1.2:72569862-72569881	None:intergenic	40.0%
	GATAGATTGCTATCCTTGAC+AGG	-	chr1.2:72570782-72570801	MS.gene33990:CDS	40.0%
	GGAATTAAAATCAGGTGCAG+AGG	+	chr1.2:72570560-72570579	None:intergenic	40.0%
	GGATAATTGAGGAACAACAC+TGG	-	chr1.2:72568812-72568831	MS.gene33990:intron	40.0%
	GTCAAGGATAGCAATCTATC+AGG	+	chr1.2:72570782-72570801	None:intergenic	40.0%
	TAGGACCAAATTCTTCAACC+TGG	+	chr1.2:72568709-72568728	None:intergenic	40.0%
	TATCAGTTATCTCACAGGTC+AGG	+	chr1.2:72569948-72569967	None:intergenic	40.0%
	TGCTTTCCTATACTTCACCT+TGG	-	chr1.2:72570322-72570341	MS.gene33990:intron	40.0%
!	AGCAGTTCGGTTCAGATTTT+GGG	-	chr1.2:72570134-72570153	MS.gene33990:intron	40.0%
!	CATAGTTTGGAATAGAAGCG+AGG	+	chr1.2:72570816-72570835	None:intergenic	40.0%
!	CCAGTGTTGGAATAAAAGGT+GGG	+	chr1.2:72568884-72568903	None:intergenic	40.0%
!	CCTATCACCTGCTGAATTTT+AGG	+	chr1.2:72568728-72568747	None:intergenic	40.0%
!	TAACAGCCCTTGTTATGAGT+TGG	-	chr1.2:72570161-72570180	MS.gene33990:CDS	40.0%
!	TAGCAGTTCGGTTCAGATTT+TGG	-	chr1.2:72570133-72570152	MS.gene33990:intron	40.0%
!	TCCAGTGTTGGAATAAAAGG+TGG	+	chr1.2:72568885-72568904	None:intergenic	40.0%
!	TGCTCGATTCGTGAACTATT+TGG	-	chr1.2:72569993-72570012	MS.gene33990:intron	40.0%
!!	AGTTGTTCATGGTTTGGTTC+AGG	-	chr1.2:72569316-72569335	MS.gene33990:intron	40.0%
!!!	GGGGTATTTTAACAAACAGG+TGG	+	chr1.2:72568856-72568875	None:intergenic	40.0%
	AAATTCAGCAGGTGATAGGC+TGG	-	chr1.2:72568729-72568748	MS.gene33990:intron	45.0%
	ACCTCCGAATGTGTCTCATT+TGG	-	chr1.2:72568565-72568584	MS.gene33990:intron	45.0%
	CAGCCTACCAACTCATAACA+AGG	+	chr1.2:72570171-72570190	None:intergenic	45.0%
	CAGTTCAGCACAAACTGAAC+TGG	+	chr1.2:72570070-72570089	None:intergenic	45.0%
	CATATTGCGTAGCCAACTGA+CGG	-	chr1.2:72570754-72570773	MS.gene33990:CDS	45.0%
	GAAACAAACTTGCACGACCA+AGG	+	chr1.2:72570342-72570361	None:intergenic	45.0%
	GAATAAAAGGTGGGTGGAAG+GGG	+	chr1.2:72568875-72568894	None:intergenic	45.0%
	GGAATAAAAGGTGGGTGGAA+GGG	+	chr1.2:72568876-72568895	None:intergenic	45.0%
	GTGTTGGAATAAAAGGTGGG+TGG	+	chr1.2:72568881-72568900	None:intergenic	45.0%
	TATCTCTCTTACCCCAACTG+AGG	-	chr1.2:72568601-72568620	MS.gene33990:CDS	45.0%
	TGGAATAAAAGGTGGGTGGA+AGG	+	chr1.2:72568877-72568896	None:intergenic	45.0%
	TTGTTCTTTCCGGTGCAGTT+TGG	-	chr1.2:72570022-72570041	MS.gene33990:intron	45.0%
!	AACATTGGTGCTTGTTGGCT+TGG	-	chr1.2:72570608-72570627	MS.gene33990:intron	45.0%
!	CCCACCTTTTATTCCAACAC+TGG	-	chr1.2:72568881-72568900	MS.gene33990:intron	45.0%
!	GGGTCCAATGTTTGTTAGCA+TGG	-	chr1.2:72568917-72568936	MS.gene33990:intron	45.0%
!	GTCGGTTCAGTTTAGCAGTT+CGG	-	chr1.2:72570121-72570140	MS.gene33990:intron	45.0%
!	GTTTGGAATAGAAGCGAGGA+TGG	+	chr1.2:72570812-72570831	None:intergenic	45.0%
!	TCTGGAATGTCACAAACCTG+TGG	+	chr1.2:72569756-72569775	None:intergenic	45.0%
!!	AGCCCTTGTTATGAGTTGGT+AGG	-	chr1.2:72570165-72570184	MS.gene33990:CDS	45.0%
!!	GGCAAAGTGTTGTTACTCAG+AGG	-	chr1.2:72568434-72568453	MS.gene33990:CDS	45.0%
!!	TTTGAGAGCACCTGCTCTTA+TGG	+	chr1.2:72569146-72569165	None:intergenic	45.0%
!!!	AATATAATATTTTTTTATCT+AGG	-	chr1.2:72569885-72569904	MS.gene33990:intron	5.0%
	AACCTGTGGTGCTTCAGACA+TGG	+	chr1.2:72569742-72569761	None:intergenic	50.0%
	CACATTCGGAGGTTCAAGAG+AGG	+	chr1.2:72568558-72568577	None:intergenic	50.0%
	GCACGACCAAGGTGAAGTAT+AGG	+	chr1.2:72570331-72570350	None:intergenic	50.0%
	GCCAAATGAGACACATTCGG+AGG	+	chr1.2:72568569-72568588	None:intergenic	50.0%
	GTTCGCTAACCAAACTGCAC+CGG	+	chr1.2:72570034-72570053	None:intergenic	50.0%
	TCGAAATGTGACAGCTCACG+AGG	-	chr1.2:72569017-72569036	MS.gene33990:intron	50.0%
	TTATGGAGGGCTCAACGCTT+TGG	+	chr1.2:72569129-72569148	None:intergenic	50.0%
!	AGAGCACCTGCTCTTATGGA+GGG	+	chr1.2:72569142-72569161	None:intergenic	50.0%
!	ATCTATCAGGCACCGTCAGT+TGG	+	chr1.2:72570769-72570788	None:intergenic	50.0%
!	TTCCATGTCTGAAGCACCAC+AGG	-	chr1.2:72569737-72569756	MS.gene33990:intron	50.0%
	CGAGGATGGTATCCCTGTCA+AGG	+	chr1.2:72570798-72570817	None:intergenic	55.0%
	CGGAGGTTCAAGAGAGGAAG+AGG	+	chr1.2:72568552-72568571	None:intergenic	55.0%
	GTCAGGTTTGGACAGCTGCA+GGG	-	chr1.2:72569094-72569113	MS.gene33990:intron	55.0%
	GTTGAGCCCTCCATAAGAGC+AGG	-	chr1.2:72569133-72569152	MS.gene33990:intron	55.0%
	TGTCAGGTTTGGACAGCTGC+AGG	-	chr1.2:72569093-72569112	MS.gene33990:intron	55.0%
!	ATCAGGTGCAGAGGCATGTC+AGG	+	chr1.2:72570551-72570570	None:intergenic	55.0%
!!	GAGAGCACCTGCTCTTATGG+AGG	+	chr1.2:72569143-72569162	None:intergenic	55.0%
	TGGAGGGCTCAACGCTTTGG+AGG	+	chr1.2:72569126-72569145	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	72568428	72570879	72568428	ID=MS.gene33990
chr1.2	mRNA	72568428	72570879	72568428	ID=MS.gene33990.t1;Parent=MS.gene33990
chr1.2	exon	72570685	72570879	72570685	ID=MS.gene33990.t1.exon1;Parent=MS.gene33990.t1
chr1.2	CDS	72570685	72570879	72570685	ID=cds.MS.gene33990.t1;Parent=MS.gene33990.t1
chr1.2	exon	72570557	72570597	72570557	ID=MS.gene33990.t1.exon2;Parent=MS.gene33990.t1
chr1.2	CDS	72570557	72570597	72570557	ID=cds.MS.gene33990.t1;Parent=MS.gene33990.t1
chr1.2	exon	72570153	72570208	72570153	ID=MS.gene33990.t1.exon3;Parent=MS.gene33990.t1
chr1.2	CDS	72570153	72570208	72570153	ID=cds.MS.gene33990.t1;Parent=MS.gene33990.t1
chr1.2	exon	72568586	72568634	72568586	ID=MS.gene33990.t1.exon4;Parent=MS.gene33990.t1
chr1.2	CDS	72568586	72568634	72568586	ID=cds.MS.gene33990.t1;Parent=MS.gene33990.t1
chr1.2	exon	72568428	72568503	72568428	ID=MS.gene33990.t1.exon5;Parent=MS.gene33990.t1
chr1.2	CDS	72568428	72568503	72568428	ID=cds.MS.gene33990.t1;Parent=MS.gene33990.t1

Gene Sequence

>MS.gene33990

ATGAGTGGCAAAGTGTTGTTACTCAGAGGAACACCATTATCGTTATCATCATTGTCGAATCCGAAAATCCAACACAAGTTGTTACAGTTTCGTAGGTTGTCTTCAAAAACTAACTGTTGTTCCTCTTCCTCTCTTGAACCTCCGAATGTGTCTCATTTGGCAAAAACAGCTCATATCTCTCTTACCCCAACTGAGGTTATTCCCATTTTTTTTTTTTCTTTTCAAATTAGAAATATTCTTTTTTAAAATTTCTAATAGTAATGGTGATTCATGTTATTCCAGGTTGAAGAATTTGGTCCTAAAATTCAGCAGGTGATAGGCTGGTACGTGAAATAAAAAACTCTTTTTATTTTATTTGGCTATTTTTATAGTAATTTTATGATAGGATAATTGAGGAACAACACTGGATTCTCAGTGTTAGCCCACCACCTGTTTGTTAAAATACCCCTTCCACCCACCTTTTATTCCAACACTGGATTCATGTTGTTTGGGTCCAATGTTTGTTAGCATGGATGTTTCATTAATGCAAAACAAACTAAATTGAAAGTGTATTTTGTACAATGTTTGATATTGTGTTGCATTTTGTTTGTCGAAATGTGACAGCTCACGAGGCTTAACATTTTGTTTCTAAAGGTACCAAAACTTCAAATTTAGATTGATTTGTGTGTCAGGTTTGGACAGCTGCAGGGTGTTGACCTCCAAAGCGTTGAGCCCTCCATAAGAGCAGGTGCTCTCAAAACCAATATTCTAATTTCTCATTTCATATCCTTGTTTTGGAGTTTCTCTAATGTTTGTTTGCATACATTTTCATGTGACCGAACCTTACTTTTGAAATACAAATATTTTCATGGAGATGGTTTCTTATGTTGTTAAATTTTATTGTATGTTAGTTGTTCATGGTTTGGTTCAGGTAGAAGTAGAAAACCGAACGAAACTGAACCAGAAATGTATGAACTGAACTAATTATATATTATTAACTCAACGTAGTTGTGTCAGAACTTGAAACTTCCTTTTGTTTAGCATGTAGCAATTTCTGTAGCTTTTTCATCATTGAAATAAAAAATGGACAAGACCTTTCAACCTTATGATTCTCATAGTGACTAAGATTGCAAACACAAATAGGTAAGTGAATAAAATAGACGAAAGATGAAAATAAGAAAACAGTCTTCAAGAGATACAATATATAGTTTATTAACTCTTACACGTAGGTGTAGCTTACGATTCATTCATTCTGAATAAATAACTAAAACTAAAGAACAGTGCAGTTAAAAATCTGAAAACTATGTTGTTTATGGGTTTTTCATTTTTTTTCCATGTCTGAAGCACCACAGGTTTGTGACATTCCAGATTTAGGATTTAGTGTTTGTATAAATTATGATGCTTTTATTTAGGTTTCAGATGTTTCTTAAAGTTGCAAATGACAAGAATCAGCCTTTGTAGCATGTCAGTAACTCTGCAATATAATATTTTTTTATCTAGGATATAAGCTTTAGACAGTTTGTGAAAGTGAATGAATTCCTGACCTGTGAGATAACTGATAGTTTAGTTCACAAATTGTCAAACACTGCTCGATTCGTGAACTATTTGGTGCAAATTGTTCTTTCCGGTGCAGTTTGGTTAGCGAACTGTGTTTAAAATACCAGTTCAGTTTGTGCTGAACTGTACAAAATGGTTCAATTTTTTTTAGTGCAAAGTCGGTTCAGTTTAGCAGTTCGGTTCAGATTTTGGGTTTTTAACAGCCCTTGTTATGAGTTGGTAGGCTGTAGCCTTCATTCATGAACTGAAAACACGTTTGTATCTATTCTGTATTCACAGAGAAATGTCAGTGCTATTGCTGTCTTACACAAATAGCAAATCAATATTAAATGTTCCATATTATTTGCTTTCTTCTCGTTGCTTTCCTATACTTCACCTTGGTCGTGCAAGTTTGTTTCAATATATTTTATATTTCATACAGTGGAGATTTCGTTTTTTTTTTTTTTTACAAAGGAGCAAATTTTCTAGGGTGCTCGATTTTTCCACTTTATTTTATCATAAACAAAGGGAAGAAAGGAATAGGGTAGATGAGTATCATGCCCTTACAATAAATTTCCATTATTTAATATATTAAGTGATTCTCTCCTGACATGCCTCTGCACCTGATTTTAATTCCATGAACGTTTTTTAAATGAGTGGTAGAAAACATTGGTGCTTGTTGGCTTGGCTTTAAGTTTTTAGTTTCTAATTTTTTTCATGTTATCTGCAGATACTGAAAACAATTTGCGTGACAATACACCTGAAACATTTGATCAACGGTGAGTTGTTTATTCATTATTTGTAAATTGGGCATATTGCGTAGCCAACTGACGGTGCCTGATAGATTGCTATCCTTGACAGGGATACCATCCTCGCTTCTATTCCAAACTATGAGGAGCCTTACATTAAAGTTCCAAAAGTCCTAAATGTGGACTAG

Protein sequence

>MS.gene33990.t1

MSGKVLLLRGTPLSLSSLSNPKIQHKLLQFRRLSSKTNCCSSSSLEPPNVSHLAKTAHISLTPTEVEEFGPKIQQVIGWFGQLQGVDLQSVEPSIRADTENNLRDNTPETFDQRDTILASIPNYEEPYIKVPKVLNVD