Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35074.t1 | XP_013457257.1 | 98.3 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 6.20E-119 | 436.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35074.t1 | Q8S1Z1 | 69.0 | 229 | 71 | 0 | 1 | 229 | 1 | 229 | 7.2e-84 | 311.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35074.t1 | B7FKL3 | 98.3 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 4.5e-119 | 436.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27648 | MS.gene35074 | PPI |
| MS.gene35074 | MS.gene001986 | PPI |
| MS.gene35074 | MS.gene019309 | PPI |
| MS.gene47800 | MS.gene35074 | PPI |
| MS.gene35074 | MS.gene033253 | PPI |
| MS.gene01229 | MS.gene35074 | PPI |
| MS.gene35074 | MS.gene054186 | PPI |
| MS.gene35074 | MS.gene015586 | PPI |
| MS.gene056257 | MS.gene35074 | PPI |
| MS.gene35074 | MS.gene48368 | PPI |
| MS.gene003693 | MS.gene35074 | PPI |
| MS.gene35074 | MS.gene50744 | PPI |
| MS.gene35074 | MS.gene072782 | PPI |
| MS.gene35074 | MS.gene002256 | PPI |
| MS.gene41916 | MS.gene35074 | PPI |
| MS.gene76511 | MS.gene35074 | PPI |
| MS.gene059422 | MS.gene35074 | PPI |
| MS.gene037324 | MS.gene35074 | PPI |
| MS.gene35074 | MS.gene52173 | PPI |
| MS.gene99744 | MS.gene35074 | PPI |
| MS.gene029242 | MS.gene35074 | PPI |
| MS.gene36329 | MS.gene35074 | PPI |
| MS.gene35074 | MS.gene23314 | PPI |
| MS.gene02213 | MS.gene35074 | PPI |
| MS.gene85127 | MS.gene35074 | PPI |
| MS.gene56868 | MS.gene35074 | PPI |
| MS.gene060830 | MS.gene35074 | PPI |
| MS.gene023799 | MS.gene35074 | PPI |
| MS.gene42236 | MS.gene35074 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35074.t1 | MTR_4g094380 | 98.253 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 5.64e-167 | 459 |
| MS.gene35074.t1 | MTR_4g094380 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 3.75e-99 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35074.t1 | AT3G60360 | 61.572 | 229 | 87 | 1 | 1 | 229 | 1 | 228 | 1.05e-102 | 297 |
Find 38 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCTTCAAAGTGAGAAAA+AGG | 0.290672 | 4.4:+20244304 | MS.gene35074:CDS |
| ACGCTCTTTGTGAGCAGGTC+TGG | 0.296864 | 4.4:-20243153 | None:intergenic |
| ATGTGAAAGAAGACACTTTA+CGG | 0.340011 | 4.4:+20243341 | MS.gene35074:CDS |
| ATATTCCTGATAATATTAAA+AGG | 0.347552 | 4.4:+20247530 | MS.gene35074:CDS |
| ATTGATGAAGACACAAGATA+TGG | 0.356282 | 4.4:+20244268 | MS.gene35074:CDS |
| ATGATCAATCAAGTGCAAAT+TGG | 0.364827 | 4.4:-20244447 | None:intergenic |
| CGCTCTTTGTGAGCAGGTCT+GGG | 0.369189 | 4.4:-20243152 | None:intergenic |
| TGTTTCAATCACAGGTACTT+AGG | 0.379172 | 4.4:+20243445 | MS.gene35074:intron |
| GGTCTTCGAGGAAGAAATTC+GGG | 0.397372 | 4.4:+20243272 | MS.gene35074:intron |
| GGCACTGAAGAAGGAGTTGC+AGG | 0.398896 | 4.4:+20248794 | MS.gene35074:CDS |
| AGGTCTTCGAGGAAGAAATT+CGG | 0.408654 | 4.4:+20243271 | MS.gene35074:intron |
| AGTTGCAAGCAAGGAAAGCT+AGG | 0.410483 | 4.4:+20248739 | MS.gene35074:CDS |
| AGAGAAAGTCTACATGGATA+TGG | 0.427839 | 4.4:+20248773 | MS.gene35074:CDS |
| TGTGAAAGAAGACACTTTAC+GGG | 0.432035 | 4.4:+20243342 | MS.gene35074:CDS |
| TGTATACCGGTCTACCGGTT+GGG | 0.433095 | 4.4:-20248951 | None:intergenic |
| GTTTCAATCACAGGTACTTA+GGG | 0.442736 | 4.4:+20243446 | MS.gene35074:intron |
| GATGAAATCGTCAACCCAAC+CGG | 0.458704 | 4.4:+20248937 | MS.gene35074:CDS |
| TGAGGACGCTCTTTGTGAGC+AGG | 0.462799 | 4.4:-20243158 | None:intergenic |
| CATGGATATGGCACTGAAGA+AGG | 0.470703 | 4.4:+20248785 | MS.gene35074:CDS |
| ATGTTTACTTTGCTGACGAC+AGG | 0.476056 | 4.4:+20244486 | MS.gene35074:CDS |
| CCATGTAGACTTTCTCTAGC+TGG | 0.476669 | 4.4:-20248767 | None:intergenic |
| AGTGTCTTCTTTCACATGAA+AGG | 0.479919 | 4.4:-20243335 | None:intergenic |
| CGTCAACCCAACCGGTAGAC+CGG | 0.488357 | 4.4:+20248945 | MS.gene35074:CDS |
| TCAGCACGCCACTTGTATAC+CGG | 0.511012 | 4.4:-20248964 | None:intergenic |
| TTGATGAAGACACAAGATAT+GGG | 0.519917 | 4.4:+20244269 | MS.gene35074:CDS |
| CCATTATTATTAGGTCTTCG+AGG | 0.522940 | 4.4:+20243260 | MS.gene35074:intron |
| CCAGCTAGAGAAAGTCTACA+TGG | 0.523733 | 4.4:+20248767 | MS.gene35074:CDS |
| GAGAAAGAGAGTTACGGTTG+AGG | 0.524326 | 4.4:-20243176 | None:intergenic |
| AAGTAAACATGCTTGTTCGC+TGG | 0.531696 | 4.4:-20244473 | None:intergenic |
| TTGTATACCGGTCTACCGGT+TGG | 0.532048 | 4.4:-20248952 | None:intergenic |
| ATCAGGAATATTGTCAGAAG+TGG | 0.555454 | 4.4:-20247518 | None:intergenic |
| CTTACAAAGAGTTGCAAGCA+AGG | 0.563371 | 4.4:+20248730 | MS.gene35074:CDS |
| GGAATATTGTCAGAAGTGGA+TGG | 0.588001 | 4.4:-20247514 | None:intergenic |
| GTTGCAAGCAAGGAAAGCTA+GGG | 0.593414 | 4.4:+20248740 | MS.gene35074:CDS |
| CCACTTGTATACCGGTCTAC+CGG | 0.609261 | 4.4:-20248956 | None:intergenic |
| TTTGTGAGCAGGTCTGGGAA+CGG | 0.611566 | 4.4:-20243147 | None:intergenic |
| CCGGTAGACCGGTATACAAG+TGG | 0.669014 | 4.4:+20248956 | MS.gene35074:CDS |
| AAAAGCTGCTAATAGAAACG+AGG | 0.712242 | 4.4:+20243470 | MS.gene35074:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATAAATTATATAAA+TGG | + | chr4.4:20245271-20245290 | MS.gene35074:intron | 0.0% |
| !! | TTGTTAAAAAAAATTAATTG+TGG | - | chr4.4:20245314-20245333 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGAAC+AGG | - | chr4.4:20246905-20246924 | None:intergenic | 10.0% |
| !! | AATTAAAAGAAATCATTGTT+CGG | + | chr4.4:20244667-20244686 | MS.gene35074:intron | 15.0% |
| !! | ATATTCCTGATAATATTAAA+AGG | + | chr4.4:20247530-20247549 | MS.gene35074:CDS | 15.0% |
| !! | ATTATACTATTAGATTAGAT+TGG | + | chr4.4:20244572-20244591 | MS.gene35074:intron | 15.0% |
| !! | TATGTATAAATTGTTTATGT+AGG | + | chr4.4:20244372-20244391 | MS.gene35074:intron | 15.0% |
| !!! | AATGATTTCTTTTAATTTGT+AGG | - | chr4.4:20244664-20244683 | None:intergenic | 15.0% |
| !!! | ATGATTTCTTTTAATTTGTA+GGG | - | chr4.4:20244663-20244682 | None:intergenic | 15.0% |
| !!! | ATTTTTTCTCCATTATTATT+AGG | + | chr4.4:20243251-20243270 | MS.gene35074:intron | 15.0% |
| !!! | TCTATTATTTTTTTTGAAGT+AGG | + | chr4.4:20246543-20246562 | MS.gene35074:intron | 15.0% |
| !!! | TTTTTTTTTTGTGCTTTAAA+TGG | + | chr4.4:20245869-20245888 | MS.gene35074:intron | 15.0% |
| !! | AAAAATTTCCCAAATCAATA+CGG | + | chr4.4:20245610-20245629 | MS.gene35074:intron | 20.0% |
| !! | AAAATCAGATTATAAGTAAG+GGG | + | chr4.4:20246584-20246603 | MS.gene35074:intron | 20.0% |
| !! | AATGTGATTTAATTCAAAAC+AGG | + | chr4.4:20247145-20247164 | MS.gene35074:intron | 20.0% |
| !! | ATCATCATCTATAAAAATGT+AGG | + | chr4.4:20247446-20247465 | MS.gene35074:intron | 20.0% |
| !! | ATGTGATTTAATTCAAAACA+GGG | + | chr4.4:20247146-20247165 | MS.gene35074:intron | 20.0% |
| !! | CAAAATATGTAATATACATG+CGG | - | chr4.4:20247226-20247245 | None:intergenic | 20.0% |
| !! | CATGAAAATATGATTCAATA+TGG | - | chr4.4:20248508-20248527 | None:intergenic | 20.0% |
| !! | GAAAATCAGATTATAAGTAA+GGG | + | chr4.4:20246583-20246602 | MS.gene35074:intron | 20.0% |
| !! | TACAATAAATGCTTAGTATT+AGG | + | chr4.4:20247739-20247758 | MS.gene35074:intron | 20.0% |
| !! | TAGTATATTTACGTAGTTTA+GGG | + | chr4.4:20243824-20243843 | MS.gene35074:intron | 20.0% |
| !! | TATACATGAATTTGTAAGAT+TGG | - | chr4.4:20245154-20245173 | None:intergenic | 20.0% |
| !! | TCATCATCTATAAAAATGTA+GGG | + | chr4.4:20247447-20247466 | MS.gene35074:intron | 20.0% |
| !! | TGTAAAAATACAACTATAGA+GGG | - | chr4.4:20244629-20244648 | None:intergenic | 20.0% |
| !! | TGTTTACATATATCTTGTTA+TGG | + | chr4.4:20247999-20248018 | MS.gene35074:intron | 20.0% |
| !! | TTAGTATATTTACGTAGTTT+AGG | + | chr4.4:20243823-20243842 | MS.gene35074:intron | 20.0% |
| !! | TTGATAGACAAATTAAAACA+GGG | + | chr4.4:20248050-20248069 | MS.gene35074:intron | 20.0% |
| !! | TTGTAAAAATACAACTATAG+AGG | - | chr4.4:20244630-20244649 | None:intergenic | 20.0% |
| !! | TTTGATAGACAAATTAAAAC+AGG | + | chr4.4:20248049-20248068 | MS.gene35074:intron | 20.0% |
| !!! | AAAAAACATTTCTAGAAATC+CGG | - | chr4.4:20248679-20248698 | None:intergenic | 20.0% |
| !!! | ATCTTTTCTTATAACAAGTT+TGG | + | chr4.4:20244525-20244544 | MS.gene35074:intron | 20.0% |
| !!! | ATTTGGGAAATTTTTAGATT+TGG | - | chr4.4:20245605-20245624 | None:intergenic | 20.0% |
| !!! | CTATTTAGATTTTAGATGTA+AGG | + | chr4.4:20247273-20247292 | MS.gene35074:intron | 20.0% |
| !!! | CTTTACCTTTTAATATTATC+AGG | - | chr4.4:20247538-20247557 | None:intergenic | 20.0% |
| !!! | CTTTTTATAAGTTTTGACTA+AGG | + | chr4.4:20243722-20243741 | MS.gene35074:intron | 20.0% |
| !!! | GAAACTGATTTAATTAAACA+TGG | - | chr4.4:20246189-20246208 | None:intergenic | 20.0% |
| !!! | GTTTATTGATTAAGTAATTG+TGG | - | chr4.4:20245339-20245358 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTCTTGCAC+AGG | + | chr4.4:20248694-20248713 | MS.gene35074:intron | 20.0% |
| ! | ACTAACTTAAGAACAAACTA+TGG | - | chr4.4:20244757-20244776 | None:intergenic | 25.0% |
| ! | AGTATAATACAATACATGCA+TGG | - | chr4.4:20244560-20244579 | None:intergenic | 25.0% |
| ! | ATAACAAGTAACAAGAATAC+AGG | - | chr4.4:20247382-20247401 | None:intergenic | 25.0% |
| ! | CGAAAATCAGATTATAAGTA+AGG | + | chr4.4:20246582-20246601 | MS.gene35074:intron | 25.0% |
| ! | GTTAATTCAAAAACTGTTGA+TGG | + | chr4.4:20243513-20243532 | MS.gene35074:CDS | 25.0% |
| ! | GTTCTTAATTAGATATGTCA+TGG | - | chr4.4:20246133-20246152 | None:intergenic | 25.0% |
| ! | TAAAACAGGGAAAAATAGAA+TGG | + | chr4.4:20248063-20248082 | MS.gene35074:intron | 25.0% |
| ! | TATATGATCAGAAAAATGGT+AGG | + | chr4.4:20248896-20248915 | MS.gene35074:intron | 25.0% |
| ! | TATCAATGACAATTAAGAAG+TGG | + | chr4.4:20246154-20246173 | MS.gene35074:intron | 25.0% |
| ! | TCATCATCATAAATATGACT+AGG | + | chr4.4:20245666-20245685 | MS.gene35074:intron | 25.0% |
| ! | TCCATATATGATCAGAAAAA+TGG | + | chr4.4:20248892-20248911 | MS.gene35074:intron | 25.0% |
| ! | TCCTTATTCGACTTAAATAT+TGG | - | chr4.4:20248091-20248110 | None:intergenic | 25.0% |
| ! | TCTTATAACAAGTTTGGATT+GGG | + | chr4.4:20244531-20244550 | MS.gene35074:intron | 25.0% |
| ! | TGCATATGTAAAGACTAAAA+CGG | - | chr4.4:20248852-20248871 | None:intergenic | 25.0% |
| ! | TTCTTATAACAAGTTTGGAT+TGG | + | chr4.4:20244530-20244549 | MS.gene35074:intron | 25.0% |
| !! | AATACAGCAATTTAAAGTGT+AGG | + | chr4.4:20246069-20246088 | MS.gene35074:intron | 25.0% |
| !! | AATCATATTTTCATGCTACT+GGG | + | chr4.4:20248513-20248532 | MS.gene35074:intron | 25.0% |
| !! | ACTAAATAATTCTAGGGATA+TGG | + | chr4.4:20247649-20247668 | MS.gene35074:intron | 25.0% |
| !! | CGCATGTATATTACATATTT+TGG | + | chr4.4:20247224-20247243 | MS.gene35074:intron | 25.0% |
| !! | GTTTTATGATTGTTAGTTGT+TGG | + | chr4.4:20244195-20244214 | MS.gene35074:intron | 25.0% |
| !! | TAACTACTTTCTATCCTTTT+CGG | + | chr4.4:20243560-20243579 | MS.gene35074:intron | 25.0% |
| !! | TGTTCTGTACAGTAATATTT+TGG | + | chr4.4:20247763-20247782 | MS.gene35074:intron | 25.0% |
| !!! | AATTTTTTTTCGTCTACACT+AGG | - | chr4.4:20245903-20245922 | None:intergenic | 25.0% |
| !!! | ACCATTTTTCTGATCATATA+TGG | - | chr4.4:20248896-20248915 | None:intergenic | 25.0% |
| !!! | ATATAGTTTTTTCCTACAGT+AGG | - | chr4.4:20244880-20244899 | None:intergenic | 25.0% |
| !!! | GCTATTTTCATAAGATATCT+CGG | + | chr4.4:20243650-20243669 | MS.gene35074:intron | 25.0% |
| !!! | GGATGAGTTTTATTTTAAGA+TGG | + | chr4.4:20243491-20243510 | MS.gene35074:CDS | 25.0% |
| !!! | TACTCCTTTCTTATTTCTAT+GGG | + | chr4.4:20247022-20247041 | MS.gene35074:intron | 25.0% |
| !!! | TTTTTGTTTGTTTCAATCAC+AGG | + | chr4.4:20243437-20243456 | MS.gene35074:intron | 25.0% |
| !!! | TTTTTTTGAAGTAGGATGAT+GGG | + | chr4.4:20246551-20246570 | MS.gene35074:intron | 25.0% |
| !!! | TTTTTTTTGAAGTAGGATGA+TGG | + | chr4.4:20246550-20246569 | MS.gene35074:intron | 25.0% |
| AAAGCTTCAAAGTGAGAAAA+AGG | + | chr4.4:20244304-20244323 | MS.gene35074:CDS | 30.0% | |
| AAATCATTGTTCGGATTTGA+TGG | + | chr4.4:20244676-20244695 | MS.gene35074:intron | 30.0% | |
| AACTAGCCACATAAAAATCA+AGG | - | chr4.4:20244178-20244197 | None:intergenic | 30.0% | |
| AAGTAGTTAGTTACATACAC+TGG | - | chr4.4:20243549-20243568 | None:intergenic | 30.0% | |
| AAGTGAAATATTGCAGAGAA+AGG | - | chr4.4:20243388-20243407 | None:intergenic | 30.0% | |
| ACGTGATTATTTATGTGAAG+AGG | - | chr4.4:20243204-20243223 | None:intergenic | 30.0% | |
| ACTAGCCACATAAAAATCAA+GGG | - | chr4.4:20244177-20244196 | None:intergenic | 30.0% | |
| AGATTATAAGTAAGGGGTTT+GGG | + | chr4.4:20246590-20246609 | MS.gene35074:intron | 30.0% | |
| AGTGAAATATTGCAGAGAAA+GGG | - | chr4.4:20243387-20243406 | None:intergenic | 30.0% | |
| ATAAAAATCAAGGGTCTGTT+TGG | - | chr4.4:20244168-20244187 | None:intergenic | 30.0% | |
| ATAAGCTGAATTAGACACAT+AGG | + | chr4.4:20245828-20245847 | MS.gene35074:intron | 30.0% | |
| ATAATCTAAGTCTGCATTGA+AGG | + | chr4.4:20248204-20248223 | MS.gene35074:intron | 30.0% | |
| ATGATCAATCAAGTGCAAAT+TGG | - | chr4.4:20244450-20244469 | None:intergenic | 30.0% | |
| ATGCTATAAGCTGCAAATTA+AGG | - | chr4.4:20243958-20243977 | None:intergenic | 30.0% | |
| ATGTGAAAGAAGACACTTTA+CGG | + | chr4.4:20243341-20243360 | MS.gene35074:CDS | 30.0% | |
| ATTGATGAAGACACAAGATA+TGG | + | chr4.4:20244268-20244287 | MS.gene35074:CDS | 30.0% | |
| CAAGATGAAAAAAGAACGAA+TGG | - | chr4.4:20248641-20248660 | None:intergenic | 30.0% | |
| CAATAGATAAGCTTCAAACA+TGG | + | chr4.4:20243764-20243783 | MS.gene35074:intron | 30.0% | |
| CATAGAAATAAGAAAGGAGT+AGG | - | chr4.4:20247023-20247042 | None:intergenic | 30.0% | |
| CATGAATTTGTAAGATTGGT+AGG | - | chr4.4:20245150-20245169 | None:intergenic | 30.0% | |
| CTGTTCTATTCTTCTGTAAA+TGG | - | chr4.4:20246640-20246659 | None:intergenic | 30.0% | |
| GAAAATCAGCTATTCATATG+AGG | - | chr4.4:20245797-20245816 | None:intergenic | 30.0% | |
| GAAATGATGCAATAAAGACA+AGG | - | chr4.4:20246400-20246419 | None:intergenic | 30.0% | |
| GACAATTTCATCAAGAAAGT+AGG | + | chr4.4:20248181-20248200 | MS.gene35074:intron | 30.0% | |
| GAGAAGAAAAGAATATGCTT+TGG | + | chr4.4:20246826-20246845 | MS.gene35074:intron | 30.0% | |
| GATGATAAAAAAGTTGACTG+AGG | - | chr4.4:20247432-20247451 | None:intergenic | 30.0% | |
| GCATATGTAAAGACTAAAAC+GGG | - | chr4.4:20248851-20248870 | None:intergenic | 30.0% | |
| GCCAATATTTAAGTCGAATA+AGG | + | chr4.4:20248087-20248106 | MS.gene35074:intron | 30.0% | |
| GTCGGTACTAAATAATTCTA+GGG | + | chr4.4:20247643-20247662 | MS.gene35074:intron | 30.0% | |
| TATAAGAATAGGTATGGGTA+AGG | + | chr4.4:20246004-20246023 | MS.gene35074:intron | 30.0% | |
| TATGTGTCTAATTCAGCTTA+TGG | - | chr4.4:20245829-20245848 | None:intergenic | 30.0% | |
| TCTATAAAAATGTAGGGAAG+AGG | + | chr4.4:20247453-20247472 | MS.gene35074:intron | 30.0% | |
| TCTTAAGGTCAAATAAGAAG+TGG | - | chr4.4:20246466-20246485 | None:intergenic | 30.0% | |
| TGTCGGTACTAAATAATTCT+AGG | + | chr4.4:20247642-20247661 | MS.gene35074:intron | 30.0% | |
| TTAAGTTAGTTAACTCGATC+AGG | + | chr4.4:20244767-20244786 | MS.gene35074:intron | 30.0% | |
| TTACCCATACCTATTCTTAT+AGG | - | chr4.4:20246005-20246024 | None:intergenic | 30.0% | |
| TTCTTGAATAAGTGTAGTGT+AGG | + | chr4.4:20246244-20246263 | MS.gene35074:intron | 30.0% | |
| TTCTTGATGAAATTGTCTAC+TGG | - | chr4.4:20248178-20248197 | None:intergenic | 30.0% | |
| TTGATGAAGACACAAGATAT+GGG | + | chr4.4:20244269-20244288 | MS.gene35074:CDS | 30.0% | |
| TTTACAGAAGAATAGAACAG+AGG | + | chr4.4:20246640-20246659 | MS.gene35074:intron | 30.0% | |
| ! | AGGTTAATTCTGAAGACAAA+TGG | - | chr4.4:20245774-20245793 | None:intergenic | 30.0% |
| ! | ATTTGTTTGGCTCATATCTT+TGG | + | chr4.4:20247866-20247885 | MS.gene35074:intron | 30.0% |
| ! | CATATTCTTTTCTTCTCTCA+CGG | - | chr4.4:20246823-20246842 | None:intergenic | 30.0% |
| ! | CATGTTTGAAGCTTATCTAT+TGG | - | chr4.4:20243766-20243785 | None:intergenic | 30.0% |
| ! | GAATCATATTTTCATGCTAC+TGG | + | chr4.4:20248512-20248531 | MS.gene35074:intron | 30.0% |
| ! | GTTTTTCTTTTGTAGGAATG+AGG | + | chr4.4:20244217-20244236 | MS.gene35074:intron | 30.0% |
| ! | TCGCTTTCTGAAAATTTGTT+TGG | + | chr4.4:20247853-20247872 | MS.gene35074:intron | 30.0% |
| ! | TGACTACTTTCTATCCTTTT+CGG | + | chr4.4:20243915-20243934 | MS.gene35074:intron | 30.0% |
| ! | TTAAGGTGTTTATCCAAACA+TGG | - | chr4.4:20243941-20243960 | None:intergenic | 30.0% |
| ! | TTATGATGATGACATTGATG+AGG | - | chr4.4:20245658-20245677 | None:intergenic | 30.0% |
| !! | AGTCAGGTTTTATCGAATAT+GGG | - | chr4.4:20246947-20246966 | None:intergenic | 30.0% |
| !! | ATGAACTTAGTCTTTCGTTT+TGG | - | chr4.4:20245522-20245541 | None:intergenic | 30.0% |
| !! | CTACTCCTTTCTTATTTCTA+TGG | + | chr4.4:20247021-20247040 | MS.gene35074:intron | 30.0% |
| !!! | AGTTGCAGGTATTGATATTT+TGG | + | chr4.4:20248808-20248827 | MS.gene35074:intron | 30.0% |
| !!! | CAGGCTTCTAAAATTTTTGT+CGG | + | chr4.4:20247625-20247644 | MS.gene35074:intron | 30.0% |
| !!! | CATTCGTTCTTTTTTCATCT+TGG | + | chr4.4:20248639-20248658 | MS.gene35074:intron | 30.0% |
| !!! | GCTATTAGTTTTCTGCTTTT+TGG | + | chr4.4:20248482-20248501 | MS.gene35074:intron | 30.0% |
| !!! | GTTGTTGGTTTTTCTTTTGT+AGG | + | chr4.4:20244210-20244229 | MS.gene35074:intron | 30.0% |
| !!! | TTTTTTGAAGTAGGATGATG+GGG | + | chr4.4:20246552-20246571 | MS.gene35074:intron | 30.0% |
| AAAAGCTGCTAATAGAAACG+AGG | + | chr4.4:20243470-20243489 | MS.gene35074:CDS | 35.0% | |
| AAAAGGTAAAGCCCTACATT+TGG | + | chr4.4:20247547-20247566 | MS.gene35074:intron | 35.0% | |
| AAGTAACAAGAATACAGGAG+AGG | - | chr4.4:20247377-20247396 | None:intergenic | 35.0% | |
| AAGTTTGACGTGAAGTTCAT+CGG | - | chr4.4:20245938-20245957 | None:intergenic | 35.0% | |
| AATAGAACAGAGGATGAACT+CGG | + | chr4.4:20246650-20246669 | MS.gene35074:intron | 35.0% | |
| AATCAGCTATTCATATGAGG+AGG | - | chr4.4:20245794-20245813 | None:intergenic | 35.0% | |
| AATCCAACAATCGTGAATGT+TGG | - | chr4.4:20246333-20246352 | None:intergenic | 35.0% | |
| AATGTTGGCGGTCATAATTA+GGG | + | chr4.4:20248400-20248419 | MS.gene35074:intron | 35.0% | |
| ACGCCTATAAGAATAGGTAT+GGG | + | chr4.4:20245999-20246018 | MS.gene35074:intron | 35.0% | |
| AGAGAAAGTCTACATGGATA+TGG | + | chr4.4:20248773-20248792 | MS.gene35074:CDS | 35.0% | |
| AGAGCAAACCATTGCAATTA+TGG | + | chr4.4:20245970-20245989 | MS.gene35074:intron | 35.0% | |
| AGTAACAAGAATACAGGAGA+GGG | - | chr4.4:20247376-20247395 | None:intergenic | 35.0% | |
| AGTCTTCAAAGCCAAATGTA+GGG | - | chr4.4:20247561-20247580 | None:intergenic | 35.0% | |
| AGTGTCTTCTTTCACATGAA+AGG | - | chr4.4:20243338-20243357 | None:intergenic | 35.0% | |
| ATAAGAAGTGGAAAAACGAG+TGG | - | chr4.4:20246454-20246473 | None:intergenic | 35.0% | |
| ATAAGATATCTCGGCAAGTT+TGG | + | chr4.4:20243659-20243678 | MS.gene35074:intron | 35.0% | |
| ATACAACTATAGAGGGACAA+AGG | - | chr4.4:20244622-20244641 | None:intergenic | 35.0% | |
| ATAGGGTGTGATTACTATTG+AGG | - | chr4.4:20247928-20247947 | None:intergenic | 35.0% | |
| ATCAGGAATATTGTCAGAAG+TGG | - | chr4.4:20247521-20247540 | None:intergenic | 35.0% | |
| ATTAGGGAGATTGAATGTTG+TGG | + | chr4.4:20248366-20248385 | MS.gene35074:intron | 35.0% | |
| ATTTGCACGCCTATAAGAAT+AGG | + | chr4.4:20245993-20246012 | MS.gene35074:intron | 35.0% | |
| CAGATTATAAGTAAGGGGTT+TGG | + | chr4.4:20246589-20246608 | MS.gene35074:intron | 35.0% | |
| CCATTATTATTAGGTCTTCG+AGG | + | chr4.4:20243260-20243279 | MS.gene35074:intron | 35.0% | |
| CCTCGAAGACCTAATAATAA+TGG | - | chr4.4:20243263-20243282 | None:intergenic | 35.0% | |
| CGGAGATGAAAAAATTGCAA+TGG | - | chr4.4:20247794-20247813 | None:intergenic | 35.0% | |
| GAATGTTCATATCTGAGCAA+TGG | + | chr4.4:20246517-20246536 | MS.gene35074:intron | 35.0% | |
| GATGCCCATAGAAATAAGAA+AGG | - | chr4.4:20247029-20247048 | None:intergenic | 35.0% | |
| GATTATAAGTAAGGGGTTTG+GGG | + | chr4.4:20246591-20246610 | MS.gene35074:intron | 35.0% | |
| GTGCAAATCCATAATTGCAA+TGG | - | chr4.4:20245981-20246000 | None:intergenic | 35.0% | |
| GTTTCAATCACAGGTACTTA+GGG | + | chr4.4:20243446-20243465 | MS.gene35074:intron | 35.0% | |
| TAAGATATCTCGGCAAGTTT+GGG | + | chr4.4:20243660-20243679 | MS.gene35074:intron | 35.0% | |
| TAGGGACTAAATTGAAGTGT+AGG | + | chr4.4:20243842-20243861 | MS.gene35074:intron | 35.0% | |
| TCAAACCTTGTGTTTGGATA+GGG | - | chr4.4:20247945-20247964 | None:intergenic | 35.0% | |
| TGATCATAACATCCTACTGT+AGG | + | chr4.4:20244865-20244884 | MS.gene35074:intron | 35.0% | |
| TGATTACTATTGAGGCTTCA+TGG | - | chr4.4:20247920-20247939 | None:intergenic | 35.0% | |
| TGGTCTACTTAAATCTTCGT+GGG | + | chr4.4:20244592-20244611 | MS.gene35074:intron | 35.0% | |
| TGTGAAAGAAGACACTTTAC+GGG | + | chr4.4:20243342-20243361 | MS.gene35074:CDS | 35.0% | |
| TGTTTCAATCACAGGTACTT+AGG | + | chr4.4:20243445-20243464 | MS.gene35074:intron | 35.0% | |
| TTGCATCATTTCACTAAAGC+CGG | + | chr4.4:20246408-20246427 | MS.gene35074:intron | 35.0% | |
| TTGGTCTACTTAAATCTTCG+TGG | + | chr4.4:20244591-20244610 | MS.gene35074:intron | 35.0% | |
| TTTATGAGACATCTCCGAAA+AGG | - | chr4.4:20243577-20243596 | None:intergenic | 35.0% | |
| TTTCATAAGCTATCTTGGTG+AGG | + | chr4.4:20244029-20244048 | MS.gene35074:intron | 35.0% | |
| ! | ACAGACCCTTGATTTTTATG+TGG | + | chr4.4:20244169-20244188 | MS.gene35074:intron | 35.0% |
| ! | ACTAAAACGGGCTCATAATA+AGG | - | chr4.4:20248839-20248858 | None:intergenic | 35.0% |
| ! | AGCTGTTTCATAAGCTATCT+TGG | + | chr4.4:20244024-20244043 | MS.gene35074:intron | 35.0% |
| ! | AGGCTATTAATGCTGATTGA+TGG | + | chr4.4:20244787-20244806 | MS.gene35074:intron | 35.0% |
| ! | GATGTTTTCTGTGATTACAC+AGG | + | chr4.4:20247606-20247625 | MS.gene35074:intron | 35.0% |
| ! | GGCTATTAATGCTGATTGAT+GGG | + | chr4.4:20244788-20244807 | MS.gene35074:intron | 35.0% |
| ! | TAGCTTTTCAACTTTCTGCA+AGG | - | chr4.4:20244423-20244442 | None:intergenic | 35.0% |
| !! | ATTGTAATGGACACACCAAA+GGG | - | chr4.4:20247818-20247837 | None:intergenic | 35.0% |
| !! | CAGTCAGGTTTTATCGAATA+TGG | - | chr4.4:20246948-20246967 | None:intergenic | 35.0% |
| !! | GTGAATGACCGTATTGATTT+GGG | - | chr4.4:20245621-20245640 | None:intergenic | 35.0% |
| !! | TGAAGGAGATTGCTTGTTAT+TGG | + | chr4.4:20248221-20248240 | MS.gene35074:intron | 35.0% |
| !! | TGTGAATGACCGTATTGATT+TGG | - | chr4.4:20245622-20245641 | None:intergenic | 35.0% |
| AAACACAAGGTTTGAGGATG+TGG | + | chr4.4:20247950-20247969 | MS.gene35074:intron | 40.0% | |
| AAGATGCTTGAACGACAGTA+AGG | + | chr4.4:20246482-20246501 | MS.gene35074:intron | 40.0% | |
| AAGTAAACATGCTTGTTCGC+TGG | - | chr4.4:20244476-20244495 | None:intergenic | 40.0% | |
| ACAAAATCGAGATCCTATGC+AGG | + | chr4.4:20245068-20245087 | MS.gene35074:intron | 40.0% | |
| ACAATGACTTTGCCCAATGA+AGG | - | chr4.4:20247301-20247320 | None:intergenic | 40.0% | |
| ACATCCTCAAACCTTGTGTT+TGG | - | chr4.4:20247951-20247970 | None:intergenic | 40.0% | |
| ACTGATGCTAACCATCAACT+TGG | - | chr4.4:20243870-20243889 | None:intergenic | 40.0% | |
| ACTGTCGTTCAAGCATCTTA+AGG | - | chr4.4:20246481-20246500 | None:intergenic | 40.0% | |
| AGATGCTTGAACGACAGTAA+GGG | + | chr4.4:20246483-20246502 | MS.gene35074:intron | 40.0% | |
| AGATGGATCAGGTTTCATAC+TGG | + | chr4.4:20248309-20248328 | MS.gene35074:intron | 40.0% | |
| AGATGTAAGGTCCCTTCATT+GGG | + | chr4.4:20247286-20247305 | MS.gene35074:intron | 40.0% | |
| AGGATAGAAAGTAGTCACAC+TGG | - | chr4.4:20243912-20243931 | None:intergenic | 40.0% | |
| AGGGTTACAAGATCGTGAAT+CGG | + | chr4.4:20245099-20245118 | MS.gene35074:intron | 40.0% | |
| AGGTCTTCGAGGAAGAAATT+CGG | + | chr4.4:20243271-20243290 | MS.gene35074:intron | 40.0% | |
| ATAGGTATGGGTAAGGTAAC+TGG | + | chr4.4:20246011-20246030 | MS.gene35074:intron | 40.0% | |
| ATCAGGTTTCATACTGGTGA+GGG | + | chr4.4:20248315-20248334 | MS.gene35074:intron | 40.0% | |
| ATGAAGACATCTTACACCAC+TGG | - | chr4.4:20245720-20245739 | None:intergenic | 40.0% | |
| ATGGGTAAGGTAACTGGTAT+GGG | + | chr4.4:20246017-20246036 | MS.gene35074:intron | 40.0% | |
| ATGTTTACTTTGCTGACGAC+AGG | + | chr4.4:20244486-20244505 | MS.gene35074:CDS | 40.0% | |
| CAAATGGCTTGAGAATGTGA+AGG | - | chr4.4:20245758-20245777 | None:intergenic | 40.0% | |
| CAATGACTTTGCCCAATGAA+GGG | - | chr4.4:20247300-20247319 | None:intergenic | 40.0% | |
| CACGCCTATAAGAATAGGTA+TGG | + | chr4.4:20245998-20246017 | MS.gene35074:intron | 40.0% | |
| CAGTTGCTACATCACAATAC+AGG | - | chr4.4:20248579-20248598 | None:intergenic | 40.0% | |
| CATTGTTCGGATTTGATGGA+TGG | + | chr4.4:20244680-20244699 | MS.gene35074:intron | 40.0% | |
| CCATTGCTGACAATATAACG+AGG | + | chr4.4:20246759-20246778 | MS.gene35074:intron | 40.0% | |
| CCTCGTTATATTGTCAGCAA+TGG | - | chr4.4:20246762-20246781 | None:intergenic | 40.0% | |
| CTATCCAAACACAAGGTTTG+AGG | + | chr4.4:20247944-20247963 | MS.gene35074:intron | 40.0% | |
| CTCAAACCTTGTGTTTGGAT+AGG | - | chr4.4:20247946-20247965 | None:intergenic | 40.0% | |
| CTTACAAAGAGTTGCAAGCA+AGG | + | chr4.4:20248730-20248749 | MS.gene35074:CDS | 40.0% | |
| GAATGTTGGCGGTCATAATT+AGG | + | chr4.4:20248399-20248418 | MS.gene35074:intron | 40.0% | |
| GACTGTAACCAACTTGTGAT+CGG | + | chr4.4:20246963-20246982 | MS.gene35074:intron | 40.0% | |
| GAGGAAGAGAAAGAGAGTTA+CGG | - | chr4.4:20243185-20243204 | None:intergenic | 40.0% | |
| GAGTCAGCCAATCATTGTAA+TGG | - | chr4.4:20247831-20247850 | None:intergenic | 40.0% | |
| GAGTCTTCAAAGCCAAATGT+AGG | - | chr4.4:20247562-20247581 | None:intergenic | 40.0% | |
| GATGAACTTCACGTCAAACT+TGG | + | chr4.4:20245937-20245956 | MS.gene35074:intron | 40.0% | |
| GGAAAATACTATCCACTGCT+TGG | + | chr4.4:20246612-20246631 | MS.gene35074:intron | 40.0% | |
| GGAATATTGTCAGAAGTGGA+TGG | - | chr4.4:20247517-20247536 | None:intergenic | 40.0% | |
| GGTGTGTCCATTACAATGAT+TGG | + | chr4.4:20247821-20247840 | MS.gene35074:intron | 40.0% | |
| GTAACAAGAATACAGGAGAG+GGG | - | chr4.4:20247375-20247394 | None:intergenic | 40.0% | |
| TAAGAAAGGAGTAGGATCAC+TGG | - | chr4.4:20247015-20247034 | None:intergenic | 40.0% | |
| TAAGGTAACTGGTACGATAG+TGG | + | chr4.4:20246040-20246059 | MS.gene35074:intron | 40.0% | |
| TAAGGTAACTGGTATGGGTA+AGG | + | chr4.4:20246022-20246041 | MS.gene35074:intron | 40.0% | |
| TACATGCGGAATCGTATACA+TGG | - | chr4.4:20247212-20247231 | None:intergenic | 40.0% | |
| TAGATGTAAGGTCCCTTCAT+TGG | + | chr4.4:20247285-20247304 | MS.gene35074:intron | 40.0% | |
| TATGATCATTCAACCCCTCT+CGG | - | chr4.4:20244853-20244872 | None:intergenic | 40.0% | |
| TATGGGTAAGGTAACTGGTA+TGG | + | chr4.4:20246016-20246035 | MS.gene35074:intron | 40.0% | |
| TCGGCAAGTTTGGGAAAATA+AGG | + | chr4.4:20243669-20243688 | MS.gene35074:intron | 40.0% | |
| TGATCTTACAAACAGCGGTT+GGG | + | chr4.4:20247106-20247125 | MS.gene35074:intron | 40.0% | |
| TGATGACATTGATGAGGATG+AGG | - | chr4.4:20245652-20245671 | None:intergenic | 40.0% | |
| TGTCTATCAAATGCAACCCA+AGG | - | chr4.4:20248040-20248059 | None:intergenic | 40.0% | |
| TTATCCAAACATGGCCGAAA+AGG | - | chr4.4:20243932-20243951 | None:intergenic | 40.0% | |
| TTCTCACAAAGCTGTAACCA+AGG | + | chr4.4:20245042-20245061 | MS.gene35074:intron | 40.0% | |
| ! | ACATTTCTAGAAATCCGGCA+TGG | - | chr4.4:20248674-20248693 | None:intergenic | 40.0% |
| ! | GATCTCGATTTTGTCTACCT+TGG | - | chr4.4:20245062-20245081 | None:intergenic | 40.0% |
| ! | GCAATTTTCATTGACGCCTT+GGG | + | chr4.4:20248021-20248040 | MS.gene35074:intron | 40.0% |
| !! | AATTGCAATGGTTTGCTCTG+TGG | - | chr4.4:20245969-20245988 | None:intergenic | 40.0% |
| !! | ATCACAAGTTGGTTACAGTC+AGG | - | chr4.4:20246963-20246982 | None:intergenic | 40.0% |
| !! | ATTGCAATGGTTTGCTCTGT+GGG | - | chr4.4:20245968-20245987 | None:intergenic | 40.0% |
| !! | CATAGAGGTACTTGGATTGT+AGG | + | chr4.4:20247057-20247076 | MS.gene35074:intron | 40.0% |
| !! | CATTGTAATGGACACACCAA+AGG | - | chr4.4:20247819-20247838 | None:intergenic | 40.0% |
| !! | GATTGCTTGTTATTGGTGAC+TGG | + | chr4.4:20248228-20248247 | MS.gene35074:intron | 40.0% |
| !! | GGTTTTATCGAATATGGGAC+AGG | - | chr4.4:20246942-20246961 | None:intergenic | 40.0% |
| !!! | TTTTTTCATCTCCGACCCTT+TGG | + | chr4.4:20247800-20247819 | MS.gene35074:intron | 40.0% |
| ACTCAGTCGAGCTTATCTAC+TGG | - | chr4.4:20244141-20244160 | None:intergenic | 45.0% | |
| ACTGGTATGGGTAAGGTAAC+TGG | + | chr4.4:20246029-20246048 | MS.gene35074:intron | 45.0% | |
| AGATTCTACCTATGACCGAG+AGG | + | chr4.4:20244835-20244854 | MS.gene35074:intron | 45.0% | |
| AGCAGGTCTAATCAAGTCTC+CGG | - | chr4.4:20246430-20246449 | None:intergenic | 45.0% | |
| AGGAACAAACAAACCCGTAG+AGG | + | chr4.4:20246721-20246740 | MS.gene35074:intron | 45.0% | |
| AGTTGCAAGCAAGGAAAGCT+AGG | + | chr4.4:20248739-20248758 | MS.gene35074:CDS | 45.0% | |
| ATCATGCGCGAGAGATGAAA+TGG | + | chr4.4:20246876-20246895 | MS.gene35074:intron | 45.0% | |
| ATCCATCATGACATTCCCTC+GGG | - | chr4.4:20248131-20248150 | None:intergenic | 45.0% | |
| ATCGAGATCCTATGCAGGAT+CGG | + | chr4.4:20245073-20245092 | MS.gene35074:intron | 45.0% | |
| ATTCTACCTATGACCGAGAG+GGG | + | chr4.4:20244837-20244856 | MS.gene35074:intron | 45.0% | |
| CAACCGCTGTTTGTAAGATC+AGG | - | chr4.4:20247107-20247126 | None:intergenic | 45.0% | |
| CATCCATCATGACATTCCCT+CGG | - | chr4.4:20248132-20248151 | None:intergenic | 45.0% | |
| CCAACAATCGTGAATGTTGG+AGG | - | chr4.4:20246330-20246349 | None:intergenic | 45.0% | |
| CCAGCTAGAGAAAGTCTACA+TGG | + | chr4.4:20248767-20248786 | MS.gene35074:CDS | 45.0% | |
| CCATGTAGACTTTCTCTAGC+TGG | - | chr4.4:20248770-20248789 | None:intergenic | 45.0% | |
| CCTCCAACATTCACGATTGT+TGG | + | chr4.4:20246327-20246346 | MS.gene35074:intron | 45.0% | |
| CCTCCTGATCTTACAAACAG+CGG | + | chr4.4:20247101-20247120 | MS.gene35074:intron | 45.0% | |
| CGCTTACAATCATCTGCTTG+TGG | + | chr4.4:20246282-20246301 | MS.gene35074:intron | 45.0% | |
| CTGATCTTACAAACAGCGGT+TGG | + | chr4.4:20247105-20247124 | MS.gene35074:intron | 45.0% | |
| GAGAAAGAGAGTTACGGTTG+AGG | - | chr4.4:20243179-20243198 | None:intergenic | 45.0% | |
| GATCAGGTTTCATACTGGTG+AGG | + | chr4.4:20248314-20248333 | MS.gene35074:intron | 45.0% | |
| GATGAAATCGTCAACCCAAC+CGG | + | chr4.4:20248937-20248956 | MS.gene35074:CDS | 45.0% | |
| GATGCTTGAACGACAGTAAG+GGG | + | chr4.4:20246484-20246503 | MS.gene35074:intron | 45.0% | |
| GATTCTACCTATGACCGAGA+GGG | + | chr4.4:20244836-20244855 | MS.gene35074:intron | 45.0% | |
| GGAACAAACAAACCCGTAGA+GGG | + | chr4.4:20246722-20246741 | MS.gene35074:intron | 45.0% | |
| GGTCTTCGAGGAAGAAATTC+GGG | + | chr4.4:20243272-20243291 | MS.gene35074:intron | 45.0% | |
| GTAGCTAGACAGAATGTTGG+CGG | + | chr4.4:20248388-20248407 | MS.gene35074:intron | 45.0% | |
| GTCTACTGGATCAACTCTGA+TGG | - | chr4.4:20248164-20248183 | None:intergenic | 45.0% | |
| GTGGTAGCTAGACAGAATGT+TGG | + | chr4.4:20248385-20248404 | MS.gene35074:intron | 45.0% | |
| GTTACAAGATCGTGAATCGG+AGG | + | chr4.4:20245102-20245121 | MS.gene35074:intron | 45.0% | |
| GTTGCAAGCAAGGAAAGCTA+GGG | + | chr4.4:20248740-20248759 | MS.gene35074:CDS | 45.0% | |
| GTTTGTTTGTTCCTGGCATG+TGG | - | chr4.4:20246715-20246734 | None:intergenic | 45.0% | |
| TCACACCCTATCCAAACACA+AGG | + | chr4.4:20247937-20247956 | MS.gene35074:intron | 45.0% | |
| TCAGGTTTCATACTGGTGAG+GGG | + | chr4.4:20248316-20248335 | MS.gene35074:intron | 45.0% | |
| TCCATCTACAACCTAAGCTC+TGG | - | chr4.4:20248296-20248315 | None:intergenic | 45.0% | |
| TGAATCGGAGGATCGTAACA+CGG | + | chr4.4:20245114-20245133 | MS.gene35074:intron | 45.0% | |
| TGACATTGATGAGGATGAGG+AGG | - | chr4.4:20245649-20245668 | None:intergenic | 45.0% | |
| TGTGATCACCGATCACAAGT+TGG | - | chr4.4:20246974-20246993 | None:intergenic | 45.0% | |
| TGTTTGTAAGATCAGGAGGC+AGG | - | chr4.4:20247100-20247119 | None:intergenic | 45.0% | |
| ! | AACTCGGTGAACTGAAACAG+TGG | + | chr4.4:20246666-20246685 | MS.gene35074:intron | 45.0% |
| ! | AAGTGTAGGCACCAAGTTGA+TGG | + | chr4.4:20243856-20243875 | MS.gene35074:intron | 45.0% |
| ! | ACCAGAGCTTAGGTTGTAGA+TGG | + | chr4.4:20248292-20248311 | MS.gene35074:intron | 45.0% |
| ! | CATGGATATGGCACTGAAGA+AGG | + | chr4.4:20248785-20248804 | MS.gene35074:CDS | 45.0% |
| ! | CTATCCTTTTCGGCCATGTT+TGG | + | chr4.4:20243925-20243944 | MS.gene35074:intron | 45.0% |
| ! | GCTTAGGTTGTAGATGGATC+AGG | + | chr4.4:20248298-20248317 | MS.gene35074:intron | 45.0% |
| ! | GGCAATTTTCATTGACGCCT+TGG | + | chr4.4:20248020-20248039 | MS.gene35074:intron | 45.0% |
| ! | TAATGGACACACCAAAGGGT+CGG | - | chr4.4:20247814-20247833 | None:intergenic | 45.0% |
| ! | TCTACGGGTTTGTTTGTTCC+TGG | - | chr4.4:20246722-20246741 | None:intergenic | 45.0% |
| !! | ACTGCTGTACTAGGTTGGTT+TGG | + | chr4.4:20248340-20248359 | MS.gene35074:intron | 45.0% |
| !! | CTGCTGTACTAGGTTGGTTT+GGG | + | chr4.4:20248341-20248360 | MS.gene35074:intron | 45.0% |
| !! | CTTGTTATTGGTGACTGGCA+AGG | + | chr4.4:20248233-20248252 | MS.gene35074:intron | 45.0% |
| !! | GTAACACGCATAGAGGTACT+TGG | + | chr4.4:20247049-20247068 | MS.gene35074:intron | 45.0% |
| !! | TAGGTTGGTTTGGGGGATTA+GGG | + | chr4.4:20248350-20248369 | MS.gene35074:intron | 45.0% |
| !! | TCGAATAAGGAGTGCCAACA+TGG | + | chr4.4:20248100-20248119 | MS.gene35074:intron | 45.0% |
| !! | TCTTACACCACTGGTGTTGT+TGG | - | chr4.4:20245711-20245730 | None:intergenic | 45.0% |
| !! | TGCTGTACTAGGTTGGTTTG+GGG | + | chr4.4:20248342-20248361 | MS.gene35074:intron | 45.0% |
| !!! | TGGTGTTGTTGGCGACTTTT+TGG | - | chr4.4:20245700-20245719 | None:intergenic | 45.0% |
| AAAGTCGCCAACAACACCAG+TGG | + | chr4.4:20245701-20245720 | MS.gene35074:intron | 50.0% | |
| AAGATCAGGAGGCAGGATGT+GGG | - | chr4.4:20247093-20247112 | None:intergenic | 50.0% | |
| AAGCAGAAGAACCACATGCC+AGG | + | chr4.4:20246701-20246720 | MS.gene35074:intron | 50.0% | |
| AGAATACAGGAGAGGGGAGA+AGG | - | chr4.4:20247369-20247388 | None:intergenic | 50.0% | |
| ATCAACTCTGATGGCCTCCT+CGG | - | chr4.4:20248155-20248174 | None:intergenic | 50.0% | |
| ATCATGACATTCCCTCGGGA+AGG | - | chr4.4:20248127-20248146 | None:intergenic | 50.0% | |
| ATTCAACCCCTCTCGGTCAT+AGG | - | chr4.4:20244846-20244865 | None:intergenic | 50.0% | |
| CCACTTGTATACCGGTCTAC+CGG | - | chr4.4:20248959-20248978 | None:intergenic | 50.0% | |
| CCGCTGTTTGTAAGATCAGG+AGG | - | chr4.4:20247104-20247123 | None:intergenic | 50.0% | |
| CTGTAAATGGCTCCAAGCAG+TGG | - | chr4.4:20246627-20246646 | None:intergenic | 50.0% | |
| GAATACAGGAGAGGGGAGAA+GGG | - | chr4.4:20247368-20247387 | None:intergenic | 50.0% | |
| GTGGAAAAACGAGTGGAAGC+AGG | - | chr4.4:20246447-20246466 | None:intergenic | 50.0% | |
| TAAGATCAGGAGGCAGGATG+TGG | - | chr4.4:20247094-20247113 | None:intergenic | 50.0% | |
| TAGAAATCCGGCATGGTGCT+GGG | - | chr4.4:20248667-20248686 | None:intergenic | 50.0% | |
| TCAGCACGCCACTTGTATAC+CGG | - | chr4.4:20248967-20248986 | None:intergenic | 50.0% | |
| TCGAGATCCTATGCAGGATC+GGG | + | chr4.4:20245074-20245093 | MS.gene35074:intron | 50.0% | |
| TCTCTCGCACCCTACTTTGT+CGG | - | chr4.4:20246799-20246818 | None:intergenic | 50.0% | |
| TGACTGGCAAGGAGGAACAA+GGG | + | chr4.4:20248244-20248263 | MS.gene35074:intron | 50.0% | |
| TTCCCGAGGGAATGTCATGA+TGG | + | chr4.4:20248126-20248145 | MS.gene35074:intron | 50.0% | |
| TTGTATACCGGTCTACCGGT+TGG | - | chr4.4:20248955-20248974 | None:intergenic | 50.0% | |
| TTTGTGAGCAGGTCTGGGAA+CGG | - | chr4.4:20243150-20243169 | None:intergenic | 50.0% | |
| ! | GTTATTGGTGACTGGCAAGG+AGG | + | chr4.4:20248236-20248255 | MS.gene35074:intron | 50.0% |
| ! | TGTATACCGGTCTACCGGTT+GGG | - | chr4.4:20248954-20248973 | None:intergenic | 50.0% |
| !! | CTAGGTTGGTTTGGGGGATT+AGG | + | chr4.4:20248349-20248368 | MS.gene35074:intron | 50.0% |
| !! | GAATGTCATGATGGATGCCG+AGG | + | chr4.4:20248135-20248154 | MS.gene35074:intron | 50.0% |
| !! | GCTGTACTAGGTTGGTTTGG+GGG | + | chr4.4:20248343-20248362 | MS.gene35074:intron | 50.0% |
| AACAAACCCGTAGAGGGAGC+AGG | + | chr4.4:20246728-20246747 | MS.gene35074:intron | 55.0% | |
| AACACTGCCTGCTCCCTCTA+CGG | - | chr4.4:20246738-20246757 | None:intergenic | 55.0% | |
| AACGCAGTCGCCGACAAAGT+AGG | + | chr4.4:20246786-20246805 | MS.gene35074:intron | 55.0% | |
| ACGCAGTCGCCGACAAAGTA+GGG | + | chr4.4:20246787-20246806 | MS.gene35074:intron | 55.0% | |
| ACGCTCTTTGTGAGCAGGTC+TGG | - | chr4.4:20243156-20243175 | None:intergenic | 55.0% | |
| ACTGGCAAGGAGGAACAAGG+GGG | + | chr4.4:20248246-20248265 | MS.gene35074:intron | 55.0% | |
| AGGGGAGAAGGGAGAAGACA+AGG | - | chr4.4:20247357-20247376 | None:intergenic | 55.0% | |
| ATCCTATGCAGGATCGGGGA+AGG | + | chr4.4:20245079-20245098 | MS.gene35074:intron | 55.0% | |
| CCGGTAGACCGGTATACAAG+TGG | + | chr4.4:20248956-20248975 | MS.gene35074:CDS | 55.0% | |
| CGAGATCCTATGCAGGATCG+GGG | + | chr4.4:20245075-20245094 | MS.gene35074:intron | 55.0% | |
| CGCTCTTTGTGAGCAGGTCT+GGG | - | chr4.4:20243155-20243174 | None:intergenic | 55.0% | |
| CTAGAAATCCGGCATGGTGC+TGG | - | chr4.4:20248668-20248687 | None:intergenic | 55.0% | |
| GACTGGCAAGGAGGAACAAG+GGG | + | chr4.4:20248245-20248264 | MS.gene35074:intron | 55.0% | |
| GCAGTGCTTCACCAGAGCTT+AGG | + | chr4.4:20248282-20248301 | MS.gene35074:intron | 55.0% | |
| GTGACTGGCAAGGAGGAACA+AGG | + | chr4.4:20248243-20248262 | MS.gene35074:intron | 55.0% | |
| TCCTATGCAGGATCGGGGAA+GGG | + | chr4.4:20245080-20245099 | MS.gene35074:intron | 55.0% | |
| TGAGGACGCTCTTTGTGAGC+AGG | - | chr4.4:20243161-20243180 | None:intergenic | 55.0% | |
| ! | GGCACTGAAGAAGGAGTTGC+AGG | + | chr4.4:20248794-20248813 | MS.gene35074:CDS | 55.0% |
| ! | GGGCATCGTAACACGCATAG+AGG | + | chr4.4:20247042-20247061 | MS.gene35074:intron | 55.0% |
| !! | TGTCATGATGGATGCCGAGG+AGG | + | chr4.4:20248138-20248157 | MS.gene35074:intron | 55.0% |
| AACAAGGGGGTGGCAGGTCT+TGG | + | chr4.4:20248259-20248278 | MS.gene35074:intron | 60.0% | |
| ACAAGGGGGTGGCAGGTCTT+GGG | + | chr4.4:20248260-20248279 | MS.gene35074:intron | 60.0% | |
| ACACTGCCTGCTCCCTCTAC+GGG | - | chr4.4:20246737-20246756 | None:intergenic | 60.0% | |
| ACCCTTCCCCGATCCTGCAT+AGG | - | chr4.4:20245084-20245103 | None:intergenic | 60.0% | |
| CGTCAACCCAACCGGTAGAC+CGG | + | chr4.4:20248945-20248964 | MS.gene35074:CDS | 60.0% | |
| CTTGGTTCCCAGCACCATGC+CGG | + | chr4.4:20248657-20248676 | MS.gene35074:intron | 60.0% | |
| GCCAACATGGACCTTCCCGA+GGG | + | chr4.4:20248113-20248132 | MS.gene35074:intron | 60.0% | |
| TCCCTCGGGAAGGTCCATGT+TGG | - | chr4.4:20248117-20248136 | None:intergenic | 60.0% | |
| TGCCAACATGGACCTTCCCG+AGG | + | chr4.4:20248112-20248131 | MS.gene35074:intron | 60.0% | |
| !! | GGGGCACTGCTGTACTAGGT+TGG | + | chr4.4:20248335-20248354 | MS.gene35074:intron | 60.0% |
| !! | GTGAGGGGCACTGCTGTACT+AGG | + | chr4.4:20248331-20248350 | MS.gene35074:intron | 60.0% |
| AGGAGGAACAAGGGGGTGGC+AGG | + | chr4.4:20248253-20248272 | MS.gene35074:intron | 65.0% | |
| GGCAAGGAGGAACAAGGGGG+TGG | + | chr4.4:20248249-20248268 | MS.gene35074:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 20243128 | 20248999 | 20243128 | ID=MS.gene35074 |
| chr4.4 | mRNA | 20243128 | 20248999 | 20243128 | ID=MS.gene35074.t1;Parent=MS.gene35074 |
| chr4.4 | exon | 20243128 | 20243183 | 20243128 | ID=MS.gene35074.t1.exon1;Parent=MS.gene35074.t1 |
| chr4.4 | CDS | 20243128 | 20243183 | 20243128 | ID=cds.MS.gene35074.t1;Parent=MS.gene35074.t1 |
| chr4.4 | exon | 20243273 | 20243363 | 20243273 | ID=MS.gene35074.t1.exon2;Parent=MS.gene35074.t1 |
| chr4.4 | CDS | 20243273 | 20243363 | 20243273 | ID=cds.MS.gene35074.t1;Parent=MS.gene35074.t1 |
| chr4.4 | exon | 20243459 | 20243550 | 20243459 | ID=MS.gene35074.t1.exon3;Parent=MS.gene35074.t1 |
| chr4.4 | CDS | 20243459 | 20243550 | 20243459 | ID=cds.MS.gene35074.t1;Parent=MS.gene35074.t1 |
| chr4.4 | exon | 20244232 | 20244325 | 20244232 | ID=MS.gene35074.t1.exon4;Parent=MS.gene35074.t1 |
| chr4.4 | CDS | 20244232 | 20244325 | 20244232 | ID=cds.MS.gene35074.t1;Parent=MS.gene35074.t1 |
| chr4.4 | exon | 20244428 | 20244507 | 20244428 | ID=MS.gene35074.t1.exon5;Parent=MS.gene35074.t1 |
| chr4.4 | CDS | 20244428 | 20244507 | 20244428 | ID=cds.MS.gene35074.t1;Parent=MS.gene35074.t1 |
| chr4.4 | exon | 20247468 | 20247551 | 20247468 | ID=MS.gene35074.t1.exon6;Parent=MS.gene35074.t1 |
| chr4.4 | CDS | 20247468 | 20247551 | 20247468 | ID=cds.MS.gene35074.t1;Parent=MS.gene35074.t1 |
| chr4.4 | exon | 20248716 | 20248815 | 20248716 | ID=MS.gene35074.t1.exon7;Parent=MS.gene35074.t1 |
| chr4.4 | CDS | 20248716 | 20248815 | 20248716 | ID=cds.MS.gene35074.t1;Parent=MS.gene35074.t1 |
| chr4.4 | exon | 20248907 | 20248999 | 20248907 | ID=MS.gene35074.t1.exon8;Parent=MS.gene35074.t1 |
| chr4.4 | CDS | 20248907 | 20248999 | 20248907 | ID=cds.MS.gene35074.t1;Parent=MS.gene35074.t1 |
| Gene Sequence |
| Protein sequence |
