Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35437.t1 | XP_003596866.1 | 95.9 | 368 | 12 | 2 | 1 | 367 | 1 | 366 | 7.30E-162 | 580.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35437.t1 | Q9SJF3 | 57.9 | 375 | 140 | 5 | 1 | 366 | 1 | 366 | 8.3e-98 | 358.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35437.t1 | G7IHH9 | 95.9 | 368 | 12 | 2 | 1 | 367 | 1 | 366 | 5.2e-162 | 580.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene35437 | -0.808282 | 3.34E-50 | -1.69E-46 |
| MS.gene050201 | MS.gene35437 | -0.818902 | 1.54E-52 | -1.69E-46 |
| MS.gene050330 | MS.gene35437 | 0.804976 | 1.67E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene35437 | -0.805594 | 1.24E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene35437 | -0.822016 | 2.97E-53 | -1.69E-46 |
| MS.gene051265 | MS.gene35437 | -0.826077 | 3.31E-54 | -1.69E-46 |
| MS.gene051316 | MS.gene35437 | 0.801671 | 8.07E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene35437 | -0.81534 | 9.72E-52 | -1.69E-46 |
| MS.gene052358 | MS.gene35437 | 0.841154 | 5.65E-58 | -1.69E-46 |
| MS.gene052361 | MS.gene35437 | 0.842514 | 2.47E-58 | -1.69E-46 |
| MS.gene052519 | MS.gene35437 | -0.801257 | 9.81E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene35437 | -0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene35437 | 0.80037 | 1.49E-48 | -1.69E-46 |
| MS.gene052867 | MS.gene35437 | -0.802526 | 5.38E-49 | -1.69E-46 |
| MS.gene053054 | MS.gene35437 | 0.87436 | 7.18E-68 | -1.69E-46 |
| MS.gene05415 | MS.gene35437 | -0.806124 | 9.58E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene35437 | 0.853909 | 1.75E-61 | -1.69E-46 |
| MS.gene055818 | MS.gene35437 | -0.824947 | 6.12E-54 | -1.69E-46 |
| MS.gene056498 | MS.gene35437 | -0.820927 | 5.30E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene35437 | -0.800459 | 1.43E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene35437 | -0.816769 | 4.66E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene35437 | -0.839103 | 1.94E-57 | -1.69E-46 |
| MS.gene057414 | MS.gene35437 | -0.827453 | 1.55E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene35437 | -0.806504 | 7.97E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene35437 | -0.801658 | 8.11E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene35437 | -0.805118 | 1.56E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene35437 | 0.859009 | 5.56E-63 | -1.69E-46 |
| MS.gene060322 | MS.gene35437 | -0.816541 | 5.24E-52 | -1.69E-46 |
| MS.gene060521 | MS.gene35437 | -0.807371 | 5.22E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene35437 | -0.802552 | 5.31E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene35437 | -0.823975 | 1.04E-53 | -1.69E-46 |
| MS.gene060634 | MS.gene35437 | 0.836822 | 7.47E-57 | -1.69E-46 |
| MS.gene061040 | MS.gene35437 | 0.826373 | 2.81E-54 | -1.69E-46 |
| MS.gene061114 | MS.gene35437 | 0.808984 | 2.37E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35437.t1 | MTR_2g086970 | 97.011 | 368 | 8 | 2 | 1 | 367 | 1 | 366 | 0.0 | 712 |
| MS.gene35437.t1 | MTR_7g105250 | 57.182 | 369 | 135 | 9 | 1 | 367 | 1 | 348 | 2.58e-117 | 344 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35437.t1 | AT1G08370 | 61.702 | 376 | 124 | 7 | 1 | 366 | 1 | 366 | 4.46e-144 | 413 |
Find 106 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCTACAATTTCTTCTTC+TGG | 0.192913 | 2.1:-15450047 | MS.gene35437:CDS |
| GTTGGCATAAGCAGAAAATT+TGG | 0.247413 | 2.1:-15452458 | MS.gene35437:intron |
| GGACAATCAATTCATTGATA+TGG | 0.252052 | 2.1:-15449379 | MS.gene35437:CDS |
| CTCAAGAAGTGAATGGTATT+TGG | 0.265191 | 2.1:-15452369 | MS.gene35437:CDS |
| CTGCTACAATTTCTTCTTCT+GGG | 0.274194 | 2.1:-15450046 | MS.gene35437:CDS |
| TGCTCTTCTGGTGCTCGTTC+AGG | 0.312100 | 2.1:-15449661 | MS.gene35437:intron |
| AAAGGTCCGAGATGCTCTTC+TGG | 0.324060 | 2.1:-15449673 | MS.gene35437:CDS |
| TCGTTTATTGCAGGCGGCTA+TGG | 0.334449 | 2.1:-15450120 | MS.gene35437:intron |
| CAAGGTGCCTCCGAAGTTAA+AGG | 0.354297 | 2.1:-15451782 | MS.gene35437:CDS |
| ATCACAATAAACTGAAATCT+TGG | 0.354748 | 2.1:+15453732 | None:intergenic |
| TGAGAAGCTTAGTGCTTTGT+TGG | 0.358743 | 2.1:+15454109 | None:intergenic |
| GGATTTCGAGTATGAAGTTC+AGG | 0.364421 | 2.1:-15452419 | MS.gene35437:CDS |
| GATCTCTCTTTGTTGTTAAG+AGG | 0.370391 | 2.1:-15453884 | MS.gene35437:intron |
| GTGCTTTGTTGGTCGAGATT+TGG | 0.371049 | 2.1:+15454120 | None:intergenic |
| GGTGGAGTTGGAGGTGGAAA+TGG | 0.371979 | 2.1:+15449750 | None:intergenic |
| TTGCAGTGAGTTTGAGGAAC+TGG | 0.375437 | 2.1:-15450982 | MS.gene35437:intron |
| GCAAGTGAAGGTGGTGGAGT+TGG | 0.385923 | 2.1:+15449738 | None:intergenic |
| TGGACTCAGGAGCATCATGC+TGG | 0.387575 | 2.1:+15449943 | None:intergenic |
| CATTTATTGCAGTGAGTTTG+AGG | 0.395892 | 2.1:-15450988 | MS.gene35437:intron |
| TTTATAAAGGATGGATCATC+AGG | 0.396436 | 2.1:+15450882 | None:intergenic |
| TCTCTAGAAATAGCTGGGTT+TGG | 0.396689 | 2.1:+15449696 | None:intergenic |
| TACACTGAAGAAATTTATAA+AGG | 0.413641 | 2.1:+15450869 | None:intergenic |
| GTACAAGTACAACGACCTTA+TGG | 0.413886 | 2.1:-15449789 | MS.gene35437:CDS |
| TTGCAGGCGGCTATGGGTAT+CGG | 0.417327 | 2.1:-15450113 | MS.gene35437:intron |
| AAGGTTGGCAGTGGCCCAAC+AGG | 0.419285 | 2.1:+15450005 | None:intergenic |
| GTGATGAATCGTCGCAATAC+TGG | 0.422666 | 2.1:-15453714 | MS.gene35437:intron |
| GCATTTCTATACAATAGATA+TGG | 0.429283 | 2.1:+15452394 | None:intergenic |
| TGTGGCTCGGCTGCTGCTGT+TGG | 0.433262 | 2.1:+15449923 | None:intergenic |
| AAGTGGAGGGGCAGTAGGTA+TGG | 0.435273 | 2.1:+15449827 | None:intergenic |
| CGTTTATTGCAGGCGGCTAT+GGG | 0.438250 | 2.1:-15450119 | MS.gene35437:intron |
| CCCAGCTATTTCTAGAGAAA+AGG | 0.446855 | 2.1:-15449691 | MS.gene35437:CDS |
| GTAGATGAGACCTTTAACTT+CGG | 0.449889 | 2.1:+15451772 | None:intergenic |
| ACTCATGCTGCTACACCTGT+TGG | 0.450388 | 2.1:-15450020 | MS.gene35437:CDS |
| TGCAGGCGGCTATGGGTATC+GGG | 0.455446 | 2.1:-15450112 | MS.gene35437:intron |
| GTTTGGAAGGGGAGAAGAAA+CGG | 0.465407 | 2.1:+15449713 | None:intergenic |
| AGTGAAGGTGGTGGAGTTGG+AGG | 0.465872 | 2.1:+15449741 | None:intergenic |
| GAAGGTGGTGGAGTTGGAGG+TGG | 0.470507 | 2.1:+15449744 | None:intergenic |
| CTCATGCTGCTACACCTGTT+GGG | 0.470653 | 2.1:-15450019 | MS.gene35437:CDS |
| AGAAGGCTTCACAAGATTTG+TGG | 0.471767 | 2.1:+15449905 | None:intergenic |
| TTTGGAAGGGGAGAAGAAAC+GGG | 0.474369 | 2.1:+15449714 | None:intergenic |
| GGATGAAGTGGAGGGGCAGT+AGG | 0.474418 | 2.1:+15449822 | None:intergenic |
| TCATCATTGCAGCAGAAGAA+AGG | 0.475545 | 2.1:+15449868 | None:intergenic |
| CGGCTGCTGCTGTTGGACTC+AGG | 0.475688 | 2.1:+15449930 | None:intergenic |
| GCCCCTCCACTTCATCCTAC+TGG | 0.476559 | 2.1:-15449816 | MS.gene35437:CDS |
| CATCATTGCAGCAGAAGAAA+GGG | 0.478689 | 2.1:+15449869 | None:intergenic |
| TAGAAATAGCTGGGTTTGGA+AGG | 0.479374 | 2.1:+15449700 | None:intergenic |
| AAATTTGGTGGAAAACCTCC+TGG | 0.485123 | 2.1:-15452443 | MS.gene35437:CDS |
| CTGAAGAAATTTATAAAGGA+TGG | 0.488509 | 2.1:+15450873 | None:intergenic |
| ACTGGAAGCAGTACCAACTA+TGG | 0.489454 | 2.1:-15450964 | MS.gene35437:CDS |
| CAGAGTCGTAAGGATGTTGA+AGG | 0.503957 | 2.1:-15453906 | MS.gene35437:CDS |
| GGAGTAGATGTTGGAAGAGA+TGG | 0.504565 | 2.1:+15449975 | None:intergenic |
| ATCAGGAACATCAGCTACAT+TGG | 0.504995 | 2.1:+15450899 | None:intergenic |
| TAACATCGATCTCAGCCAAT+GGG | 0.512566 | 2.1:-15454007 | MS.gene35437:intron |
| GCTTCACAAGATTTGTGGCT+CGG | 0.516612 | 2.1:+15449910 | None:intergenic |
| CAACGAAAGGGTCAATTCGT+TGG | 0.524030 | 2.1:+15454073 | None:intergenic |
| GGACTCAGGAGCATCATGCT+GGG | 0.525944 | 2.1:+15449944 | None:intergenic |
| GGTGGAAATGGCTGTAGCAT+TGG | 0.536920 | 2.1:+15449762 | None:intergenic |
| GAAATAGCTGGGTTTGGAAG+GGG | 0.537359 | 2.1:+15449702 | None:intergenic |
| AGAGATGGTATCTGCAAGGT+TGG | 0.539591 | 2.1:+15449990 | None:intergenic |
| CCATCCATGACTGCCATAGT+TGG | 0.543119 | 2.1:+15450951 | None:intergenic |
| TGAGAATTTCCTCAACGAAA+GGG | 0.543518 | 2.1:+15454061 | None:intergenic |
| TGTAGCATTGGAGTACCATA+AGG | 0.543996 | 2.1:+15449774 | None:intergenic |
| GGTGTAAGCGGAGTAGATGT+TGG | 0.546568 | 2.1:+15449966 | None:intergenic |
| ATTGTAGCAGAAGACTGATA+AGG | 0.546760 | 2.1:+15450059 | None:intergenic |
| CTTTAACTTCGGAGGCACCT+TGG | 0.547820 | 2.1:+15451783 | None:intergenic |
| AGAAGACTGATAAGGTTGTC+CGG | 0.549406 | 2.1:+15450067 | None:intergenic |
| GATGAGACCTTTAACTTCGG+AGG | 0.553698 | 2.1:+15451775 | None:intergenic |
| GGTATCTGCAAGGTTGGCAG+TGG | 0.554970 | 2.1:+15449996 | None:intergenic |
| ATGAGAATTTCCTCAACGAA+AGG | 0.557425 | 2.1:+15454060 | None:intergenic |
| AATGCTGCTCAAGAAGTGAA+TGG | 0.565199 | 2.1:-15452376 | MS.gene35437:CDS |
| AGAAATAGCTGGGTTTGGAA+GGG | 0.568715 | 2.1:+15449701 | None:intergenic |
| GGCATAAGCAGAAAATTTGG+TGG | 0.569335 | 2.1:-15452455 | MS.gene35437:intron |
| ACTTCAAATGCTCATATCAC+CGG | 0.575143 | 2.1:-15450086 | MS.gene35437:CDS |
| GTTGATGATGATGGCTCAAG+AGG | 0.578483 | 2.1:+15450927 | None:intergenic |
| GTAGGTATGGATGAAGACAC+GGG | 0.580863 | 2.1:+15449840 | None:intergenic |
| ACGAATTGACCCTTTCGTTG+AGG | 0.585086 | 2.1:-15454070 | MS.gene35437:CDS |
| ACAGTACCAGTAGGATGAAG+TGG | 0.589976 | 2.1:+15449810 | None:intergenic |
| AGTACCAACTATGGCAGTCA+TGG | 0.591187 | 2.1:-15450955 | MS.gene35437:CDS |
| ACGGGAGCAAGTGAAGGTGG+TGG | 0.592881 | 2.1:+15449732 | None:intergenic |
| TTAACATCGATCTCAGCCAA+TGG | 0.599690 | 2.1:-15454008 | MS.gene35437:CDS |
| GCATCATGCTGGGGTGTAAG+CGG | 0.600785 | 2.1:+15449954 | None:intergenic |
| AATTTGGTGGAAAACCTCCT+GGG | 0.602967 | 2.1:-15452442 | MS.gene35437:CDS |
| GACTCAGGAGCATCATGCTG+GGG | 0.604546 | 2.1:+15449945 | None:intergenic |
| GAAACGGGAGCAAGTGAAGG+TGG | 0.605311 | 2.1:+15449729 | None:intergenic |
| CCAACTATGGCAGTCATGGA+TGG | 0.605321 | 2.1:-15450951 | MS.gene35437:CDS |
| ACCAGTAGGATGAAGTGGAG+GGG | 0.607968 | 2.1:+15449815 | None:intergenic |
| TAATGCTCGCGAATGTGAAG+AGG | 0.613598 | 2.1:-15452341 | MS.gene35437:CDS |
| CGAGCACCAGAAGAGCATCT+CGG | 0.613645 | 2.1:+15449667 | None:intergenic |
| TACCAGTAGGATGAAGTGGA+GGG | 0.613698 | 2.1:+15449814 | None:intergenic |
| TAAAGGTCTCATCTACAAAG+AGG | 0.614588 | 2.1:-15451765 | MS.gene35437:intron |
| ACAGGTGTAGCAGCATGAGT+TGG | 0.617968 | 2.1:+15450023 | None:intergenic |
| TTGGAAGTAGTTGATGATGA+TGG | 0.619350 | 2.1:+15450918 | None:intergenic |
| GAAGAAACGGGAGCAAGTGA+AGG | 0.633795 | 2.1:+15449726 | None:intergenic |
| AGTAGGTATGGATGAAGACA+CGG | 0.634463 | 2.1:+15449839 | None:intergenic |
| ATTTGGTGGAAAACCTCCTG+GGG | 0.636956 | 2.1:-15452441 | MS.gene35437:CDS |
| GTACCAGTAGGATGAAGTGG+AGG | 0.640592 | 2.1:+15449813 | None:intergenic |
| GATTCTTAATGCATATGCCA+AGG | 0.648448 | 2.1:-15451800 | MS.gene35437:CDS |
| AACGCAACAATGTCTCAGAA+CGG | 0.658570 | 2.1:-15454153 | None:intergenic |
| ATCATTGCAGCAGAAGAAAG+GGG | 0.660388 | 2.1:+15449870 | None:intergenic |
| TGTACTTGTACAGTACCAGT+AGG | 0.670268 | 2.1:+15449801 | None:intergenic |
| ATTGCAGCAGAAGAAAGGGG+AGG | 0.717430 | 2.1:+15449873 | None:intergenic |
| TTTGGTGGAAAACCTCCTGG+GGG | 0.721595 | 2.1:-15452440 | MS.gene35437:CDS |
| TGGAAGAGATGGTATCTGCA+AGG | 0.725008 | 2.1:+15449986 | None:intergenic |
| TAGGTATGGATGAAGACACG+GGG | 0.739412 | 2.1:+15449841 | None:intergenic |
| AGGTATGGATGAAGACACGG+GGG | 0.768571 | 2.1:+15449842 | None:intergenic |
| GGTATGGATGAAGACACGGG+GGG | 0.779869 | 2.1:+15449843 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAATAAATAAATAA+TGG | + | chr2.1:15454041-15454060 | None:intergenic | 0.0% |
| !! | GTCAATAATTAAATATAAAA+AGG | + | chr2.1:15450740-15450759 | None:intergenic | 10.0% |
| !!! | AAATTTTGGTTTTTTTTAAT+GGG | - | chr2.1:15449631-15449650 | MS.gene35437:intron | 10.0% |
| !!! | AGTTTTTCAATTTTAAAATT+AGG | + | chr2.1:15450614-15450633 | None:intergenic | 10.0% |
| !!! | TAATAATATATTTTACAGTT+AGG | - | chr2.1:15450298-15450317 | MS.gene35437:intron | 10.0% |
| !!! | TCACAATAATATATTTTTTT+TGG | - | chr2.1:15453888-15453907 | MS.gene35437:CDS | 10.0% |
| !!! | TCTTTTATACTTAAATTTAT+AGG | - | chr2.1:15450327-15450346 | MS.gene35437:intron | 10.0% |
| !!! | TTAAATTTTCTTATTTGATT+TGG | - | chr2.1:15449845-15449864 | MS.gene35437:CDS | 10.0% |
| !!! | TTTTTTTTTCTTTTAATATG+GGG | - | chr2.1:15452925-15452944 | MS.gene35437:intron | 10.0% |
| !! | AGCTAAGAAATATAATAATA+TGG | + | chr2.1:15451809-15451828 | None:intergenic | 15.0% |
| !! | GAAGAATTAAAAATTGTATT+TGG | + | chr2.1:15453118-15453137 | None:intergenic | 15.0% |
| !!! | AAAGTACAATTATTTCTTTT+AGG | - | chr2.1:15451506-15451525 | MS.gene35437:intron | 15.0% |
| !!! | AAATTTATAGGATTTGTTTT+AGG | - | chr2.1:15450339-15450358 | MS.gene35437:intron | 15.0% |
| !!! | AAGTACAATTATTTCTTTTA+GGG | - | chr2.1:15451507-15451526 | MS.gene35437:intron | 15.0% |
| !!! | AATTTTGGTTTTTTTTAATG+GGG | - | chr2.1:15449632-15449651 | MS.gene35437:intron | 15.0% |
| !!! | ATGAAAAAAAAGCTAATTTT+AGG | - | chr2.1:15450541-15450560 | MS.gene35437:intron | 15.0% |
| !!! | GAAAATATTTTACATGAATA+TGG | + | chr2.1:15452812-15452831 | None:intergenic | 15.0% |
| !!! | GAAATTTTGGTTTTTTTTAA+TGG | - | chr2.1:15449630-15449649 | MS.gene35437:intron | 15.0% |
| !!! | TATTTGTTAGAATTTTAGAA+AGG | - | chr2.1:15451477-15451496 | MS.gene35437:intron | 15.0% |
| !!! | TCAATATTGATATTTTATTG+TGG | - | chr2.1:15451293-15451312 | MS.gene35437:intron | 15.0% |
| !!! | TGAAAAAAAAGCTAATTTTA+GGG | - | chr2.1:15450542-15450561 | MS.gene35437:intron | 15.0% |
| !!! | TGTATAATTGTAGTTTTTAT+AGG | + | chr2.1:15450461-15450480 | None:intergenic | 15.0% |
| !!! | TTTCTAATTTCTCTATTTTT+TGG | - | chr2.1:15454077-15454096 | MS.gene35437:CDS | 15.0% |
| !!! | TTTTTAATTGAGGTTAATTT+TGG | - | chr2.1:15449698-15449717 | MS.gene35437:CDS | 15.0% |
| !! | AAATTGAAAAACTGAATAGT+TGG | - | chr2.1:15450621-15450640 | MS.gene35437:intron | 20.0% |
| !! | AAGAGAGAAAATACAAAAAA+AGG | + | chr2.1:15449523-15449542 | None:intergenic | 20.0% |
| !! | AATAATATTAAACGACTGTT+TGG | - | chr2.1:15453969-15453988 | MS.gene35437:intron | 20.0% |
| !! | ACAAAGATTAAATACATACA+TGG | + | chr2.1:15451006-15451025 | None:intergenic | 20.0% |
| !! | AGAGAGAAAATACAAAAAAA+GGG | + | chr2.1:15449522-15449541 | None:intergenic | 20.0% |
| !! | ATAATATTAAACGACTGTTT+GGG | - | chr2.1:15453970-15453989 | MS.gene35437:intron | 20.0% |
| !! | ATAGAAAATGAAAGGAAAAA+AGG | + | chr2.1:15452695-15452714 | None:intergenic | 20.0% |
| !! | ATGTCGCATAAAAATTTAAA+AGG | + | chr2.1:15450716-15450735 | None:intergenic | 20.0% |
| !! | CATAAAAATTTAAAAGGGAA+TGG | + | chr2.1:15450710-15450729 | None:intergenic | 20.0% |
| !! | TACACTGAAGAAATTTATAA+AGG | + | chr2.1:15452622-15452641 | None:intergenic | 20.0% |
| !! | TATATACATTCACTTATGTT+TGG | - | chr2.1:15451654-15451673 | MS.gene35437:intron | 20.0% |
| !! | TATTTAATCTTTGTCATTGT+TGG | - | chr2.1:15451012-15451031 | MS.gene35437:intron | 20.0% |
| !! | TCTTTGATATTCAGAAATAT+TGG | - | chr2.1:15452235-15452254 | MS.gene35437:intron | 20.0% |
| !! | TGGTTAAAAATTAAAAAACG+AGG | + | chr2.1:15452792-15452811 | None:intergenic | 20.0% |
| !! | TGTCGCATAAAAATTTAAAA+GGG | + | chr2.1:15450715-15450734 | None:intergenic | 20.0% |
| !! | TTATTGATGTTAGAGAATAA+AGG | - | chr2.1:15452858-15452877 | MS.gene35437:intron | 20.0% |
| !! | TTGATTTAAGTGGTTTAATT+GGG | - | chr2.1:15449669-15449688 | MS.gene35437:CDS | 20.0% |
| !!! | ATATTTCTGAATATCAAAGA+TGG | + | chr2.1:15452235-15452254 | None:intergenic | 20.0% |
| !!! | ATATTTTATGATCCTTATCA+AGG | - | chr2.1:15454001-15454020 | MS.gene35437:intron | 20.0% |
| !!! | ATTGATTTAAGTGGTTTAAT+TGG | - | chr2.1:15449668-15449687 | MS.gene35437:CDS | 20.0% |
| !!! | GTATTGTAGATATTGTTTTA+AGG | - | chr2.1:15450926-15450945 | MS.gene35437:CDS | 20.0% |
| !!! | GTTGTTGTATAATGTTATTT+TGG | - | chr2.1:15452096-15452115 | MS.gene35437:intron | 20.0% |
| !!! | TATCACATTTTCTGTTAATA+TGG | - | chr2.1:15450147-15450166 | MS.gene35437:intron | 20.0% |
| !!! | TATTTCTGAATATCAAAGAT+GGG | + | chr2.1:15452234-15452253 | None:intergenic | 20.0% |
| !!! | TCTGATTATTTATTTTTTGC+AGG | + | chr2.1:15451338-15451357 | None:intergenic | 20.0% |
| !!! | TGAAAATATACTTTTGTGAT+TGG | - | chr2.1:15450950-15450969 | MS.gene35437:CDS | 20.0% |
| !!! | TGTATAATGTTATTTTGGTT+TGG | - | chr2.1:15452101-15452120 | MS.gene35437:intron | 20.0% |
| !!! | TTTCAAATAATTTGTTACGA+CGG | - | chr2.1:15452669-15452688 | MS.gene35437:intron | 20.0% |
| !!! | TTTTTTCTAAAGACAAAATG+AGG | + | chr2.1:15452348-15452367 | None:intergenic | 20.0% |
| ! | AAGACAGTATAGAAAATGAA+AGG | + | chr2.1:15452703-15452722 | None:intergenic | 25.0% |
| ! | AATATGTAATATTCAGCACA+TGG | - | chr2.1:15453293-15453312 | MS.gene35437:intron | 25.0% |
| ! | AATGTCAGAAATACTAAAGT+TGG | + | chr2.1:15453155-15453174 | None:intergenic | 25.0% |
| ! | AGTATATTGTGAAACAATAG+TGG | - | chr2.1:15450008-15450027 | MS.gene35437:CDS | 25.0% |
| ! | ATCACAATAAACTGAAATCT+TGG | + | chr2.1:15449759-15449778 | None:intergenic | 25.0% |
| ! | ATGTAGTACAAATCATATAG+CGG | + | chr2.1:15449988-15450007 | None:intergenic | 25.0% |
| ! | CAAATGAAAATGATCATAAG+TGG | + | chr2.1:15453267-15453286 | None:intergenic | 25.0% |
| ! | CTAGTTTACTAATAATCCAA+TGG | + | chr2.1:15449908-15449927 | None:intergenic | 25.0% |
| ! | CTGAAGAAATTTATAAAGGA+TGG | + | chr2.1:15452618-15452637 | None:intergenic | 25.0% |
| ! | GAGAGAAAATACAAAAAAAG+GGG | + | chr2.1:15449521-15449540 | None:intergenic | 25.0% |
| ! | GCATTTCTATACAATAGATA+TGG | + | chr2.1:15451097-15451116 | None:intergenic | 25.0% |
| ! | TAAATACATACATGGACATA+GGG | + | chr2.1:15450998-15451017 | None:intergenic | 25.0% |
| ! | TAATATTATTGTGATCAGAC+AGG | + | chr2.1:15453959-15453978 | None:intergenic | 25.0% |
| ! | TAGAGAAATTAGAAATTGAG+AGG | + | chr2.1:15454072-15454091 | None:intergenic | 25.0% |
| ! | TATCAATATTGATGAATGCA+AGG | + | chr2.1:15451285-15451304 | None:intergenic | 25.0% |
| ! | TATTTAATTAGTGGTGACTT+TGG | - | chr2.1:15451555-15451574 | MS.gene35437:intron | 25.0% |
| ! | TCATGTTATTCTACTTCTAT+GGG | - | chr2.1:15451965-15451984 | MS.gene35437:intron | 25.0% |
| ! | TGTTTCACTTATTTGAGAAT+AGG | - | chr2.1:15451254-15451273 | MS.gene35437:intron | 25.0% |
| ! | TTAAATACATACATGGACAT+AGG | + | chr2.1:15450999-15451018 | None:intergenic | 25.0% |
| ! | TTAATATATGCTCCTTGATA+AGG | + | chr2.1:15454016-15454035 | None:intergenic | 25.0% |
| ! | TTATTAGTAAACTAGACTAC+AGG | - | chr2.1:15449913-15449932 | MS.gene35437:CDS | 25.0% |
| ! | TTGAATTAACAAAGACATAC+TGG | - | chr2.1:15452888-15452907 | MS.gene35437:intron | 25.0% |
| !! | AAATATACTTTTGTGATTGG+TGG | - | chr2.1:15450953-15450972 | MS.gene35437:CDS | 25.0% |
| !! | TATTTGGAATTAATCCTAGT+CGG | + | chr2.1:15453102-15453121 | None:intergenic | 25.0% |
| !! | TGATGTTGAAATCTTTTGAT+GGG | + | chr2.1:15452380-15452399 | None:intergenic | 25.0% |
| !! | TTGATGTTGAAATCTTTTGA+TGG | + | chr2.1:15452381-15452400 | None:intergenic | 25.0% |
| !! | TTTTCTATACTGTCTTGAAA+TGG | - | chr2.1:15452707-15452726 | MS.gene35437:intron | 25.0% |
| !! | TTTTCTTTTAATATGGGGAA+GGG | - | chr2.1:15452930-15452949 | MS.gene35437:intron | 25.0% |
| !! | TTTTTCTTTTAATATGGGGA+AGG | - | chr2.1:15452929-15452948 | MS.gene35437:intron | 25.0% |
| !!! | ATGTTATTTTGGTTTGGAAA+TGG | - | chr2.1:15452107-15452126 | MS.gene35437:intron | 25.0% |
| !!! | TATAGGATTTGTTTTAGGTT+TGG | - | chr2.1:15450344-15450363 | MS.gene35437:intron | 25.0% |
| !!! | TATATCATAGTGGATTTTGA+TGG | - | chr2.1:15450431-15450450 | MS.gene35437:intron | 25.0% |
| !!! | TATTTTTTGCAGGTTTTACA+AGG | + | chr2.1:15451328-15451347 | None:intergenic | 25.0% |
| !!! | TGGGAATTTGTTTTTAATTG+AGG | - | chr2.1:15449688-15449707 | MS.gene35437:CDS | 25.0% |
| !!! | TGGGTTTTAATTGATTTAAG+TGG | - | chr2.1:15449659-15449678 | MS.gene35437:intron | 25.0% |
| !!! | TGTTAAGAGGTTTGAAATTT+TGG | - | chr2.1:15449617-15449636 | MS.gene35437:intron | 25.0% |
| !!! | TGTTATTTTGGTTTGGAAAT+GGG | - | chr2.1:15452108-15452127 | MS.gene35437:intron | 25.0% |
| !!! | TTTTAAAATTAGGTCATGTC+TGG | + | chr2.1:15450604-15450623 | None:intergenic | 25.0% |
| !!! | TTTTTTTTAATGGGGTTGAT+GGG | - | chr2.1:15449640-15449659 | MS.gene35437:intron | 25.0% |
| AAAATGAGGATAGTACAATG+AGG | + | chr2.1:15452334-15452353 | None:intergenic | 30.0% | |
| AAATGAGGATAGTACAATGA+GGG | + | chr2.1:15452333-15452352 | None:intergenic | 30.0% | |
| AAGCATACCTACATATTGAA+AGG | + | chr2.1:15450682-15450701 | None:intergenic | 30.0% | |
| AGAAATCTAAGAATGCAACA+TGG | + | chr2.1:15452263-15452282 | None:intergenic | 30.0% | |
| AGTGAAACAAAATTCTAGTC+TGG | + | chr2.1:15451243-15451262 | None:intergenic | 30.0% | |
| AGTTAACTTATTAGTCCATG+AGG | + | chr2.1:15453066-15453085 | None:intergenic | 30.0% | |
| ATGTGATAGTAAAGTAGAAC+GGG | + | chr2.1:15451836-15451855 | None:intergenic | 30.0% | |
| ATTATATATCGACATGCAAG+TGG | + | chr2.1:15452050-15452069 | None:intergenic | 30.0% | |
| CTAGTAAGTTATCTGAGAAA+CGG | - | chr2.1:15451410-15451429 | MS.gene35437:intron | 30.0% | |
| CTCATGTTATTCTACTTCTA+TGG | - | chr2.1:15451964-15451983 | MS.gene35437:intron | 30.0% | |
| CTGTTATCAATAGTGAATTG+CGG | + | chr2.1:15450861-15450880 | None:intergenic | 30.0% | |
| GAGATTATCCAAAGCTTAAA+CGG | + | chr2.1:15452300-15452319 | None:intergenic | 30.0% | |
| GATGTGATAGTAAAGTAGAA+CGG | + | chr2.1:15451837-15451856 | None:intergenic | 30.0% | |
| GGACAATCAATTCATTGATA+TGG | - | chr2.1:15454109-15454128 | MS.gene35437:CDS | 30.0% | |
| GGACTAATAAGTTAACTGAT+TGG | - | chr2.1:15453069-15453088 | MS.gene35437:intron | 30.0% | |
| GGGGAAATCATTAATTAAAG+TGG | - | chr2.1:15452951-15452970 | MS.gene35437:intron | 30.0% | |
| GTACTTTAGACACATTCAAT+GGG | - | chr2.1:15451361-15451380 | MS.gene35437:intron | 30.0% | |
| GTGAAACAAAATTCTAGTCT+GGG | + | chr2.1:15451242-15451261 | None:intergenic | 30.0% | |
| TAAATTTCAGTTTGTCACCT+TGG | - | chr2.1:15450178-15450197 | MS.gene35437:intron | 30.0% | |
| TACTTTAGACACATTCAATG+GGG | - | chr2.1:15451362-15451381 | MS.gene35437:intron | 30.0% | |
| TACTTTATCCGTTTAAGCTT+TGG | - | chr2.1:15452289-15452308 | MS.gene35437:intron | 30.0% | |
| TGTACTTTAGACACATTCAA+TGG | - | chr2.1:15451360-15451379 | MS.gene35437:intron | 30.0% | |
| TTTATAAAGGATGGATCATC+AGG | + | chr2.1:15452609-15452628 | None:intergenic | 30.0% | |
| ! | AGTGTTGTTAAATAGCAGTT+AGG | + | chr2.1:15450071-15450090 | None:intergenic | 30.0% |
| ! | ATTTGGAATTAATCCTAGTC+GGG | + | chr2.1:15453101-15453120 | None:intergenic | 30.0% |
| ! | ATTTTACAATTCTCCTCAAG+GGG | - | chr2.1:15452985-15453004 | MS.gene35437:intron | 30.0% |
| ! | CACATTTTCTGTTAATATGG+TGG | - | chr2.1:15450150-15450169 | MS.gene35437:intron | 30.0% |
| ! | CATTTTACAATTCTCCTCAA+GGG | - | chr2.1:15452984-15453003 | MS.gene35437:intron | 30.0% |
| ! | CTTATGTTTGGCTAATTTTC+AGG | - | chr2.1:15451666-15451685 | MS.gene35437:intron | 30.0% |
| ! | TGCTATTTAACAACACTGAT+AGG | - | chr2.1:15450074-15450093 | MS.gene35437:CDS | 30.0% |
| ! | TTTCTTTTAATATGGGGAAG+GGG | - | chr2.1:15452931-15452950 | MS.gene35437:intron | 30.0% |
| !! | TTTTCTATGCTAGACTTGTT+TGG | - | chr2.1:15453197-15453216 | MS.gene35437:intron | 30.0% |
| !!! | ATTTCACATAGTGGGTTTTT+CGG | - | chr2.1:15450821-15450840 | MS.gene35437:intron | 30.0% |
| !!! | GGTTTTTTCTGAATTACTCT+AGG | - | chr2.1:15450029-15450048 | MS.gene35437:CDS | 30.0% |
| !!! | GTTTTTTTTAATGGGGTTGA+TGG | - | chr2.1:15449639-15449658 | MS.gene35437:intron | 30.0% |
| !!! | TATAGTTTTGAGTTACAGTC+TGG | - | chr2.1:15450224-15450243 | MS.gene35437:intron | 30.0% |
| !!! | TTTCTCTATTTTTTGGCTCT+TGG | - | chr2.1:15454084-15454103 | MS.gene35437:CDS | 30.0% |
| !!! | TTTGTTTTAGGTTTGGTTAC+CGG | - | chr2.1:15450351-15450370 | MS.gene35437:intron | 30.0% |
| AAATTCTAGTCTGGGTGTAT+AGG | + | chr2.1:15451234-15451253 | None:intergenic | 35.0% | |
| AATATTAGCAGCGGATAGAT+CGG | - | chr2.1:15451435-15451454 | MS.gene35437:intron | 35.0% | |
| AATGAGGATAGTACAATGAG+GGG | + | chr2.1:15452332-15452351 | None:intergenic | 35.0% | |
| AATTCTAGTCTGGGTGTATA+GGG | + | chr2.1:15451233-15451252 | None:intergenic | 35.0% | |
| ACTTCAAATGCTCATATCAC+CGG | - | chr2.1:15453402-15453421 | MS.gene35437:intron | 35.0% | |
| ATACCTACATATTGAAAGGC+TGG | + | chr2.1:15450678-15450697 | None:intergenic | 35.0% | |
| ATGAGAATTTCCTCAACGAA+AGG | + | chr2.1:15449431-15449450 | None:intergenic | 35.0% | |
| ATGCATTTGACAAATGCATG+GGG | - | chr2.1:15451869-15451888 | MS.gene35437:intron | 35.0% | |
| ATTATACAACAACATGCCCA+AGG | + | chr2.1:15452089-15452108 | None:intergenic | 35.0% | |
| ATTGTAGCAGAAGACTGATA+AGG | + | chr2.1:15453432-15453451 | None:intergenic | 35.0% | |
| ATTTGAACTCCATCCTATGT+GGG | - | chr2.1:15453008-15453027 | MS.gene35437:intron | 35.0% | |
| CATGCATTTGACAAATGCAT+GGG | - | chr2.1:15451868-15451887 | MS.gene35437:intron | 35.0% | |
| CATTTATTGCAGTGAGTTTG+AGG | - | chr2.1:15452500-15452519 | MS.gene35437:intron | 35.0% | |
| CCTTGAGGAGAATTGTAAAA+TGG | + | chr2.1:15452986-15453005 | None:intergenic | 35.0% | |
| CGTTTCTCAGATAACTTACT+AGG | + | chr2.1:15451412-15451431 | None:intergenic | 35.0% | |
| CTCAAGAAGTGAATGGTATT+TGG | - | chr2.1:15451119-15451138 | MS.gene35437:intron | 35.0% | |
| CTGCTACAATTTCTTCTTCT+GGG | - | chr2.1:15453442-15453461 | MS.gene35437:intron | 35.0% | |
| CTTATCTTACTTGTGTCCTT+TGG | - | chr2.1:15452746-15452765 | MS.gene35437:intron | 35.0% | |
| GAAAAACCCACTATGTGAAA+TGG | + | chr2.1:15450822-15450841 | None:intergenic | 35.0% | |
| GATTCTTAATGCATATGCCA+AGG | - | chr2.1:15451688-15451707 | MS.gene35437:intron | 35.0% | |
| GTTGGCATAAGCAGAAAATT+TGG | - | chr2.1:15451030-15451049 | MS.gene35437:intron | 35.0% | |
| TAAAGGTCTCATCTACAAAG+AGG | - | chr2.1:15451723-15451742 | MS.gene35437:intron | 35.0% | |
| TCCCTTGTGTCAATTTAAGT+GGG | + | chr2.1:15453928-15453947 | None:intergenic | 35.0% | |
| TCTGCTACAATTTCTTCTTC+TGG | - | chr2.1:15453441-15453460 | MS.gene35437:intron | 35.0% | |
| TGAATTACTCTAGGCTATAG+TGG | - | chr2.1:15450038-15450057 | MS.gene35437:CDS | 35.0% | |
| TGACTTATTTCAACTGCGTT+CGG | - | chr2.1:15450756-15450775 | MS.gene35437:intron | 35.0% | |
| TGAGAATTTCCTCAACGAAA+GGG | + | chr2.1:15449430-15449449 | None:intergenic | 35.0% | |
| TTGTCTTTCTGTTGCATGTT+TGG | - | chr2.1:15451916-15451935 | MS.gene35437:intron | 35.0% | |
| ! | CCATTTTACAATTCTCCTCA+AGG | - | chr2.1:15452983-15453002 | MS.gene35437:intron | 35.0% |
| ! | GTAGATGAGACCTTTAACTT+CGG | + | chr2.1:15451719-15451738 | None:intergenic | 35.0% |
| ! | TTCTTTTAATATGGGGAAGG+GGG | - | chr2.1:15452932-15452951 | MS.gene35437:intron | 35.0% |
| ! | TTTGTAACTCAGTTCTGATC+AGG | - | chr2.1:15453345-15453364 | MS.gene35437:intron | 35.0% |
| ! | TTTTGACCTTATACCCACAT+AGG | + | chr2.1:15453024-15453043 | None:intergenic | 35.0% |
| !! | ACCTTTTCTCTAGAAATAGC+TGG | + | chr2.1:15453801-15453820 | None:intergenic | 35.0% |
| !! | AGGTTGCAAATCTTTTTAGC+AGG | - | chr2.1:15451167-15451186 | MS.gene35437:intron | 35.0% |
| !! | CAAAAGAAAAGTGTTCGCAA+TGG | + | chr2.1:15452649-15452668 | None:intergenic | 35.0% |
| !! | CAGGTATTGTTTTCACGTTT+TGG | - | chr2.1:15451186-15451205 | MS.gene35437:intron | 35.0% |
| !! | CCTTTTCTCTAGAAATAGCT+GGG | + | chr2.1:15453800-15453819 | None:intergenic | 35.0% |
| !! | GATCTCTCTTTGTTGTTAAG+AGG | - | chr2.1:15449604-15449623 | MS.gene35437:intron | 35.0% |
| !! | TTGGAAGTAGTTGATGATGA+TGG | + | chr2.1:15452573-15452592 | None:intergenic | 35.0% |
| !! | TTTGAAGTGTCGTCAAATAG+TGG | - | chr2.1:15450405-15450424 | MS.gene35437:intron | 35.0% |
| !!! | TCTATTTTTTGGCTCTTGGT+AGG | - | chr2.1:15454088-15454107 | MS.gene35437:CDS | 35.0% |
| AAATCATATAGCGGCCATAG+TGG | + | chr2.1:15449979-15449998 | None:intergenic | 40.0% | |
| AAGATCCTCTGATGAGCATA+TGG | - | chr2.1:15453237-15453256 | MS.gene35437:intron | 40.0% | |
| AATGCTGCTCAAGAAGTGAA+TGG | - | chr2.1:15451112-15451131 | MS.gene35437:intron | 40.0% | |
| ACTATTCGTTAGCAGATGTG+CGG | - | chr2.1:15450512-15450531 | MS.gene35437:intron | 40.0% | |
| ACTCTAGGCTATAGTGGTAT+TGG | - | chr2.1:15450044-15450063 | MS.gene35437:CDS | 40.0% | |
| AGAAATAGCTGGGTTTGGAA+GGG | + | chr2.1:15453790-15453809 | None:intergenic | 40.0% | |
| AGAAGACTGATAAGGTTGTC+CGG | + | chr2.1:15453424-15453443 | None:intergenic | 40.0% | |
| AGAAGGCTTCACAAGATTTG+TGG | + | chr2.1:15453586-15453605 | None:intergenic | 40.0% | |
| AGCCCACTTAAATTGACACA+AGG | - | chr2.1:15453923-15453942 | MS.gene35437:intron | 40.0% | |
| AGGGGAGGAACAAAAAAAGA+AGG | + | chr2.1:15453603-15453622 | None:intergenic | 40.0% | |
| AGTAGGTATGGATGAAGACA+CGG | + | chr2.1:15453652-15453671 | None:intergenic | 40.0% | |
| AGTGGAATAGCAGCTGATAT+TGG | + | chr2.1:15450495-15450514 | None:intergenic | 40.0% | |
| ATAGTGGCGCTATATCATAG+TGG | - | chr2.1:15450421-15450440 | MS.gene35437:intron | 40.0% | |
| ATCAGGAACATCAGCTACAT+TGG | + | chr2.1:15452592-15452611 | None:intergenic | 40.0% | |
| ATCATTGCAGCAGAAGAAAG+GGG | + | chr2.1:15453621-15453640 | None:intergenic | 40.0% | |
| ATCCAATGGACACACATGTT+TGG | + | chr2.1:15449894-15449913 | None:intergenic | 40.0% | |
| ATGAGGATAGTACAATGAGG+GGG | + | chr2.1:15452331-15452350 | None:intergenic | 40.0% | |
| CACTGCAATAAATGCAAGTG+AGG | + | chr2.1:15452494-15452513 | None:intergenic | 40.0% | |
| CATCATTGCAGCAGAAGAAA+GGG | + | chr2.1:15453622-15453641 | None:intergenic | 40.0% | |
| CCATGCATTTGACAAATGCA+TGG | - | chr2.1:15451867-15451886 | MS.gene35437:intron | 40.0% | |
| CCATGCATTTGTCAAATGCA+TGG | + | chr2.1:15451870-15451889 | None:intergenic | 40.0% | |
| CGAAACACGAGCAAATATAG+AGG | + | chr2.1:15450278-15450297 | None:intergenic | 40.0% | |
| CTCCCTTGTGTCAATTTAAG+TGG | + | chr2.1:15453929-15453948 | None:intergenic | 40.0% | |
| CTCTAGGCTATAGTGGTATT+GGG | - | chr2.1:15450045-15450064 | MS.gene35437:CDS | 40.0% | |
| CTGCTACCATTTCACATAGT+GGG | - | chr2.1:15450813-15450832 | MS.gene35437:intron | 40.0% | |
| GATTTGAACTCCATCCTATG+TGG | - | chr2.1:15453007-15453026 | MS.gene35437:intron | 40.0% | |
| GCCCACTTAAATTGACACAA+GGG | - | chr2.1:15453924-15453943 | MS.gene35437:intron | 40.0% | |
| GGCATAAGCAGAAAATTTGG+TGG | - | chr2.1:15451033-15451052 | MS.gene35437:intron | 40.0% | |
| GGGGTTTGAATTGATCTTCA+TGG | - | chr2.1:15451888-15451907 | MS.gene35437:intron | 40.0% | |
| GTACAAGTACAACGACCTTA+TGG | - | chr2.1:15453699-15453718 | MS.gene35437:intron | 40.0% | |
| GTGAAAATGAACGAACCCAT+TGG | + | chr2.1:15449499-15449518 | None:intergenic | 40.0% | |
| TAACATCGATCTCAGCCAAT+GGG | - | chr2.1:15449481-15449500 | MS.gene35437:intron | 40.0% | |
| TAGAAATAGCTGGGTTTGGA+AGG | + | chr2.1:15453791-15453810 | None:intergenic | 40.0% | |
| TCATCATTGCAGCAGAAGAA+AGG | + | chr2.1:15453623-15453642 | None:intergenic | 40.0% | |
| TCATTAAACTCTCACCTCAC+AGG | - | chr2.1:15451604-15451623 | MS.gene35437:intron | 40.0% | |
| TCTGCTACCATTTCACATAG+TGG | - | chr2.1:15450812-15450831 | MS.gene35437:intron | 40.0% | |
| TGAGAAGCTTAGTGCTTTGT+TGG | + | chr2.1:15449382-15449401 | None:intergenic | 40.0% | |
| TGCAGTAGACAGATGAGTTA+TGG | - | chr2.1:15452411-15452430 | MS.gene35437:CDS | 40.0% | |
| TGTACTTGTACAGTACCAGT+AGG | + | chr2.1:15453690-15453709 | None:intergenic | 40.0% | |
| TTAACATCGATCTCAGCCAA+TGG | - | chr2.1:15449480-15449499 | MS.gene35437:intron | 40.0% | |
| ! | AAATTTGGTGGAAAACCTCC+TGG | - | chr2.1:15451045-15451064 | MS.gene35437:intron | 40.0% |
| ! | AATTTGGTGGAAAACCTCCT+GGG | - | chr2.1:15451046-15451065 | MS.gene35437:intron | 40.0% |
| ! | GGATTTCGAGTATGAAGTTC+AGG | - | chr2.1:15451069-15451088 | MS.gene35437:intron | 40.0% |
| ! | TAGCAGCTGATATTGGCTAT+TGG | + | chr2.1:15450488-15450507 | None:intergenic | 40.0% |
| ! | TCTCTAGAAATAGCTGGGTT+TGG | + | chr2.1:15453795-15453814 | None:intergenic | 40.0% |
| ! | TGTAGCATTGGAGTACCATA+AGG | + | chr2.1:15453717-15453736 | None:intergenic | 40.0% |
| ! | TTTGAGTTACAGTCTGGTCT+TGG | - | chr2.1:15450230-15450249 | MS.gene35437:intron | 40.0% |
| !! | CCCAGCTATTTCTAGAGAAA+AGG | - | chr2.1:15453797-15453816 | MS.gene35437:intron | 40.0% |
| !! | GATTGTTTTGCAGAGTCGTA+AGG | - | chr2.1:15449572-15449591 | MS.gene35437:intron | 40.0% |
| AAACCAGCTCTGCCATTCAT+GGG | + | chr2.1:15451783-15451802 | None:intergenic | 45.0% | |
| AACCCCCTTGAAAAGGGAAA+CGG | + | chr2.1:15452211-15452230 | None:intergenic | 45.0% | |
| ACAGTACCAGTAGGATGAAG+TGG | + | chr2.1:15453681-15453700 | None:intergenic | 45.0% | |
| ACGAATTGACCCTTTCGTTG+AGG | - | chr2.1:15449418-15449437 | MS.gene35437:intron | 45.0% | |
| ACTACTAAGCTGACACCTCA+TGG | - | chr2.1:15453048-15453067 | MS.gene35437:intron | 45.0% | |
| ACTGGAAGCAGTACCAACTA+TGG | - | chr2.1:15452524-15452543 | MS.gene35437:intron | 45.0% | |
| AGAGATGGTATCTGCAAGGT+TGG | + | chr2.1:15453501-15453520 | None:intergenic | 45.0% | |
| AGATACTCAGATAGCGTTGC+GGG | + | chr2.1:15450795-15450814 | None:intergenic | 45.0% | |
| AGTACCAACTATGGCAGTCA+TGG | - | chr2.1:15452533-15452552 | MS.gene35437:intron | 45.0% | |
| ATCAGGTCGTTTATTGCAGG+CGG | - | chr2.1:15453362-15453381 | MS.gene35437:intron | 45.0% | |
| ATGGAGTTCAAATCCCCTTG+AGG | + | chr2.1:15453001-15453020 | None:intergenic | 45.0% | |
| CAACGAAAGGGTCAATTCGT+TGG | + | chr2.1:15449418-15449437 | None:intergenic | 45.0% | |
| CAATGGACACACATGTTTGG+AGG | + | chr2.1:15449891-15449910 | None:intergenic | 45.0% | |
| CAGAGTCGTAAGGATGTTGA+AGG | - | chr2.1:15449582-15449601 | MS.gene35437:intron | 45.0% | |
| CAGATACTCAGATAGCGTTG+CGG | + | chr2.1:15450796-15450815 | None:intergenic | 45.0% | |
| CAGTTTGTCACCTTGGTTGT+TGG | - | chr2.1:15450185-15450204 | MS.gene35437:intron | 45.0% | |
| CCATTCATGGGAGAGCAATA+AGG | + | chr2.1:15451771-15451790 | None:intergenic | 45.0% | |
| CCTTATTGCTCTCCCATGAA+TGG | - | chr2.1:15451768-15451787 | MS.gene35437:CDS | 45.0% | |
| CTCCAAACATGTGTGTCCAT+TGG | - | chr2.1:15449889-15449908 | MS.gene35437:CDS | 45.0% | |
| CTCCATCCTATGTGGGTATA+AGG | - | chr2.1:15453015-15453034 | MS.gene35437:intron | 45.0% | |
| CTGATCAGGTCGTTTATTGC+AGG | - | chr2.1:15453359-15453378 | MS.gene35437:intron | 45.0% | |
| CTTATGTACCAGGGAACCAA+AGG | + | chr2.1:15452765-15452784 | None:intergenic | 45.0% | |
| GAAACGGCGAATATTAGCAG+CGG | - | chr2.1:15451426-15451445 | MS.gene35437:intron | 45.0% | |
| GAAATAGCTGGGTTTGGAAG+GGG | + | chr2.1:15453789-15453808 | None:intergenic | 45.0% | |
| GACCTTATACCCACATAGGA+TGG | + | chr2.1:15453020-15453039 | None:intergenic | 45.0% | |
| GACTTTGCAACTCACACCTT+GGG | - | chr2.1:15452070-15452089 | MS.gene35437:intron | 45.0% | |
| GCACATCTGCTAACGAATAG+TGG | + | chr2.1:15450513-15450532 | None:intergenic | 45.0% | |
| GCTTCACAAGATTTGTGGCT+CGG | + | chr2.1:15453581-15453600 | None:intergenic | 45.0% | |
| GGAGTAGATGTTGGAAGAGA+TGG | + | chr2.1:15453516-15453535 | None:intergenic | 45.0% | |
| GTAGGTATGGATGAAGACAC+GGG | + | chr2.1:15453651-15453670 | None:intergenic | 45.0% | |
| GTGATGAATCGTCGCAATAC+TGG | - | chr2.1:15449774-15449793 | MS.gene35437:CDS | 45.0% | |
| GTGCCAGCCTTTCAATATGT+AGG | - | chr2.1:15450672-15450691 | MS.gene35437:intron | 45.0% | |
| GTTTGGAAGGGGAGAAGAAA+CGG | + | chr2.1:15453778-15453797 | None:intergenic | 45.0% | |
| TAAACCAGCTCTGCCATTCA+TGG | + | chr2.1:15451784-15451803 | None:intergenic | 45.0% | |
| TAATGCTCGCGAATGTGAAG+AGG | - | chr2.1:15451147-15451166 | MS.gene35437:intron | 45.0% | |
| TACCAGTAGGATGAAGTGGA+GGG | + | chr2.1:15453677-15453696 | None:intergenic | 45.0% | |
| TAGGTATGGATGAAGACACG+GGG | + | chr2.1:15453650-15453669 | None:intergenic | 45.0% | |
| TCTTTCCCAACACACTTCCA+CGG | - | chr2.1:15451997-15452016 | MS.gene35437:intron | 45.0% | |
| TGACTTTGCAACTCACACCT+TGG | - | chr2.1:15452069-15452088 | MS.gene35437:intron | 45.0% | |
| TGAGGATAGTACAATGAGGG+GGG | + | chr2.1:15452330-15452349 | None:intergenic | 45.0% | |
| TGAGTGCATGATGCAGAAAG+TGG | + | chr2.1:15450381-15450400 | None:intergenic | 45.0% | |
| TGATGCAGAAAGTGGAATGC+CGG | + | chr2.1:15450373-15450392 | None:intergenic | 45.0% | |
| TGATTGGAAACTACCCGACT+AGG | - | chr2.1:15453085-15453104 | MS.gene35437:intron | 45.0% | |
| TGGAAGAGATGGTATCTGCA+AGG | + | chr2.1:15453505-15453524 | None:intergenic | 45.0% | |
| TTATAGAGACAGATCGTCCG+TGG | + | chr2.1:15452017-15452036 | None:intergenic | 45.0% | |
| TTGCAGTGAGTTTGAGGAAC+TGG | - | chr2.1:15452506-15452525 | MS.gene35437:intron | 45.0% | |
| TTTGGAAGGGGAGAAGAAAC+GGG | + | chr2.1:15453777-15453796 | None:intergenic | 45.0% | |
| ! | ATTTGGTGGAAAACCTCCTG+GGG | - | chr2.1:15451047-15451066 | MS.gene35437:intron | 45.0% |
| ! | GATGAGACCTTTAACTTCGG+AGG | + | chr2.1:15451716-15451735 | None:intergenic | 45.0% |
| ! | GGAAGTGTGTTGGGAAAGAT+AGG | + | chr2.1:15451996-15452015 | None:intergenic | 45.0% |
| ! | GGTGACTTTGGTTTCTGATC+TGG | - | chr2.1:15451567-15451586 | MS.gene35437:intron | 45.0% |
| ! | GTGCTTTGTTGGTCGAGATT+TGG | + | chr2.1:15449371-15449390 | None:intergenic | 45.0% |
| ! | TGCACCGTTTCCCTTTTCAA+GGG | - | chr2.1:15452204-15452223 | MS.gene35437:intron | 45.0% |
| ! | TTGCACCGTTTCCCTTTTCA+AGG | - | chr2.1:15452203-15452222 | MS.gene35437:intron | 45.0% |
| !! | CACTAGCTTTCCAACAACCA+AGG | + | chr2.1:15450198-15450217 | None:intergenic | 45.0% |
| !! | GTTGATGATGATGGCTCAAG+AGG | + | chr2.1:15452564-15452583 | None:intergenic | 45.0% |
| !! | AATTATAATTATTTAATTAG+TGG | - | chr2.1:15451546-15451565 | MS.gene35437:intron | 5.0% |
| !!! | TTTTTTTTTTCTTTTAATAT+GGG | - | chr2.1:15452924-15452943 | MS.gene35437:intron | 5.0% |
| !!! | TTTTTTTTTTTCTTTTAATA+TGG | - | chr2.1:15452923-15452942 | MS.gene35437:intron | 5.0% |
| AAAGGTCCGAGATGCTCTTC+TGG | - | chr2.1:15453815-15453834 | MS.gene35437:intron | 50.0% | |
| ACAGGTGTAGCAGCATGAGT+TGG | + | chr2.1:15453468-15453487 | None:intergenic | 50.0% | |
| ACCAGTAGGATGAAGTGGAG+GGG | + | chr2.1:15453676-15453695 | None:intergenic | 50.0% | |
| ACTCATGCTGCTACACCTGT+TGG | - | chr2.1:15453468-15453487 | MS.gene35437:intron | 50.0% | |
| AGATGGGAACCCCCTTGAAA+AGG | + | chr2.1:15452218-15452237 | None:intergenic | 50.0% | |
| AGGTATGGATGAAGACACGG+GGG | + | chr2.1:15453649-15453668 | None:intergenic | 50.0% | |
| ATTGCAGCAGAAGAAAGGGG+AGG | + | chr2.1:15453618-15453637 | None:intergenic | 50.0% | |
| CCAACTATGGCAGTCATGGA+TGG | - | chr2.1:15452537-15452556 | MS.gene35437:intron | 50.0% | |
| CCATCCATGACTGCCATAGT+TGG | + | chr2.1:15452540-15452559 | None:intergenic | 50.0% | |
| CGTTTATTGCAGGCGGCTAT+GGG | - | chr2.1:15453369-15453388 | MS.gene35437:intron | 50.0% | |
| CTCATGCTGCTACACCTGTT+GGG | - | chr2.1:15453469-15453488 | MS.gene35437:intron | 50.0% | |
| CTGGCACTATTGAGTAACGG+TGG | + | chr2.1:15449954-15449973 | None:intergenic | 50.0% | |
| CTTCATACTCGAAATCCCCC+AGG | + | chr2.1:15451066-15451085 | None:intergenic | 50.0% | |
| GAAGAAACGGGAGCAAGTGA+AGG | + | chr2.1:15453765-15453784 | None:intergenic | 50.0% | |
| GAGCACCATATGCTCATCAG+AGG | + | chr2.1:15453245-15453264 | None:intergenic | 50.0% | |
| GATAGTACAATGAGGGGGGA+GGG | + | chr2.1:15452326-15452345 | None:intergenic | 50.0% | |
| GATGGGAACCCCCTTGAAAA+GGG | + | chr2.1:15452217-15452236 | None:intergenic | 50.0% | |
| GGTGGAAATGGCTGTAGCAT+TGG | + | chr2.1:15453729-15453748 | None:intergenic | 50.0% | |
| GGTGTAAGCGGAGTAGATGT+TGG | + | chr2.1:15453525-15453544 | None:intergenic | 50.0% | |
| GTACCAGTAGGATGAAGTGG+AGG | + | chr2.1:15453678-15453697 | None:intergenic | 50.0% | |
| TCGTTTATTGCAGGCGGCTA+TGG | - | chr2.1:15453368-15453387 | MS.gene35437:intron | 50.0% | |
| TTTGGTGGAAAACCTCCTGG+GGG | - | chr2.1:15451048-15451067 | MS.gene35437:intron | 50.0% | |
| ! | ACTTGTGTCCTTTGGTTCCC+TGG | - | chr2.1:15452754-15452773 | MS.gene35437:intron | 50.0% |
| ! | ATCGTCCGTGGAAGTGTGTT+GGG | + | chr2.1:15452005-15452024 | None:intergenic | 50.0% |
| ! | CAAGGTGCCTCCGAAGTTAA+AGG | - | chr2.1:15451706-15451725 | MS.gene35437:intron | 50.0% |
| ! | GCGCTGGCACTATTGAGTAA+CGG | + | chr2.1:15449957-15449976 | None:intergenic | 50.0% |
| !! | CACCGTTTCCCTTTTCAAGG+GGG | - | chr2.1:15452206-15452225 | MS.gene35437:intron | 50.0% |
| !! | CTTTAACTTCGGAGGCACCT+TGG | + | chr2.1:15451708-15451727 | None:intergenic | 50.0% |
| !! | GCACCGTTTCCCTTTTCAAG+GGG | - | chr2.1:15452205-15452224 | MS.gene35437:intron | 50.0% |
| !! | GCGGATAGATCGGCTTTGAA+TGG | - | chr2.1:15451445-15451464 | MS.gene35437:intron | 50.0% |
| AAGTGGAGGGGCAGTAGGTA+TGG | + | chr2.1:15453664-15453683 | None:intergenic | 55.0% | |
| CAATAGTGCCAGCGCCACTA+TGG | - | chr2.1:15449962-15449981 | MS.gene35437:CDS | 55.0% | |
| CAGGCGTACACATGTGCATC+TGG | - | chr2.1:15451623-15451642 | MS.gene35437:intron | 55.0% | |
| CATACTCGAAATCCCCCAGG+AGG | + | chr2.1:15451063-15451082 | None:intergenic | 55.0% | |
| GAAACGGGAGCAAGTGAAGG+TGG | + | chr2.1:15453762-15453781 | None:intergenic | 55.0% | |
| GCATCATGCTGGGGTGTAAG+CGG | + | chr2.1:15453537-15453556 | None:intergenic | 55.0% | |
| GGATAGTACAATGAGGGGGG+AGG | + | chr2.1:15452327-15452346 | None:intergenic | 55.0% | |
| GGTATCTGCAAGGTTGGCAG+TGG | + | chr2.1:15453495-15453514 | None:intergenic | 55.0% | |
| GGTATGGATGAAGACACGGG+GGG | + | chr2.1:15453648-15453667 | None:intergenic | 55.0% | |
| GGTGGAGTTGGAGGTGGAAA+TGG | + | chr2.1:15453741-15453760 | None:intergenic | 55.0% | |
| TCTCCCATGAATGGCAGAGC+TGG | - | chr2.1:15451777-15451796 | MS.gene35437:CDS | 55.0% | |
| TGCACATGTGTACGCCTGTG+AGG | + | chr2.1:15451621-15451640 | None:intergenic | 55.0% | |
| TGCTCTTCTGGTGCTCGTTC+AGG | - | chr2.1:15453827-15453846 | MS.gene35437:intron | 55.0% | |
| TTGCAGGCGGCTATGGGTAT+CGG | - | chr2.1:15453375-15453394 | MS.gene35437:intron | 55.0% | |
| ! | GATCGTCCGTGGAAGTGTGT+TGG | + | chr2.1:15452006-15452025 | None:intergenic | 55.0% |
| !! | ACGAGGAGCGCTTATGTACC+AGG | + | chr2.1:15452775-15452794 | None:intergenic | 55.0% |
| !! | AGTGAAGGTGGTGGAGTTGG+AGG | + | chr2.1:15453750-15453769 | None:intergenic | 55.0% |
| !! | CGAGCACCAGAAGAGCATCT+CGG | + | chr2.1:15453824-15453843 | None:intergenic | 55.0% |
| !! | CGAGGAGCGCTTATGTACCA+GGG | + | chr2.1:15452774-15452793 | None:intergenic | 55.0% |
| !! | GACTCAGGAGCATCATGCTG+GGG | + | chr2.1:15453546-15453565 | None:intergenic | 55.0% |
| !! | GCAAGTGAAGGTGGTGGAGT+TGG | + | chr2.1:15453753-15453772 | None:intergenic | 55.0% |
| !! | GGACTCAGGAGCATCATGCT+GGG | + | chr2.1:15453547-15453566 | None:intergenic | 55.0% |
| !! | TGGACTCAGGAGCATCATGC+TGG | + | chr2.1:15453548-15453567 | None:intergenic | 55.0% |
| AAGGTTGGCAGTGGCCCAAC+AGG | + | chr2.1:15453486-15453505 | None:intergenic | 60.0% | |
| ACGGGAGCAAGTGAAGGTGG+TGG | + | chr2.1:15453759-15453778 | None:intergenic | 60.0% | |
| GCCCCTCCACTTCATCCTAC+TGG | - | chr2.1:15453672-15453691 | MS.gene35437:intron | 60.0% | |
| GGATGAAGTGGAGGGGCAGT+AGG | + | chr2.1:15453669-15453688 | None:intergenic | 60.0% | |
| TATAGCGGCCATAGTGGCGC+TGG | + | chr2.1:15449973-15449992 | None:intergenic | 60.0% | |
| TGCAGGCGGCTATGGGTATC+GGG | - | chr2.1:15453376-15453395 | MS.gene35437:intron | 60.0% | |
| !! | GAAGGTGGTGGAGTTGGAGG+TGG | + | chr2.1:15453747-15453766 | None:intergenic | 60.0% |
| CGGCTGCTGCTGTTGGACTC+AGG | + | chr2.1:15453561-15453580 | None:intergenic | 65.0% | |
| ! | TGTGGCTCGGCTGCTGCTGT+TGG | + | chr2.1:15453568-15453587 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 15449344 | 15454166 | 15449344 | ID=MS.gene35437 |
| chr2.1 | mRNA | 15449344 | 15454166 | 15449344 | ID=MS.gene35437.t1;Parent=MS.gene35437 |
| chr2.1 | exon | 15454008 | 15454166 | 15454008 | ID=MS.gene35437.t1.exon1;Parent=MS.gene35437.t1 |
| chr2.1 | CDS | 15454008 | 15454166 | 15454008 | ID=cds.MS.gene35437.t1;Parent=MS.gene35437.t1 |
| chr2.1 | exon | 15453885 | 15453925 | 15453885 | ID=MS.gene35437.t1.exon2;Parent=MS.gene35437.t1 |
| chr2.1 | CDS | 15453885 | 15453925 | 15453885 | ID=cds.MS.gene35437.t1;Parent=MS.gene35437.t1 |
| chr2.1 | exon | 15453715 | 15453764 | 15453715 | ID=MS.gene35437.t1.exon3;Parent=MS.gene35437.t1 |
| chr2.1 | CDS | 15453715 | 15453764 | 15453715 | ID=cds.MS.gene35437.t1;Parent=MS.gene35437.t1 |
| chr2.1 | exon | 15452322 | 15452466 | 15452322 | ID=MS.gene35437.t1.exon4;Parent=MS.gene35437.t1 |
| chr2.1 | CDS | 15452322 | 15452466 | 15452322 | ID=cds.MS.gene35437.t1;Parent=MS.gene35437.t1 |
| chr2.1 | exon | 15451766 | 15451822 | 15451766 | ID=MS.gene35437.t1.exon5;Parent=MS.gene35437.t1 |
| chr2.1 | CDS | 15451766 | 15451822 | 15451766 | ID=cds.MS.gene35437.t1;Parent=MS.gene35437.t1 |
| chr2.1 | exon | 15450872 | 15450998 | 15450872 | ID=MS.gene35437.t1.exon6;Parent=MS.gene35437.t1 |
| chr2.1 | CDS | 15450872 | 15450998 | 15450872 | ID=cds.MS.gene35437.t1;Parent=MS.gene35437.t1 |
| chr2.1 | exon | 15449662 | 15450129 | 15449662 | ID=MS.gene35437.t1.exon7;Parent=MS.gene35437.t1 |
| chr2.1 | CDS | 15449662 | 15450129 | 15449662 | ID=cds.MS.gene35437.t1;Parent=MS.gene35437.t1 |
| chr2.1 | exon | 15449344 | 15449400 | 15449344 | ID=MS.gene35437.t1.exon8;Parent=MS.gene35437.t1 |
| chr2.1 | CDS | 15449344 | 15449400 | 15449344 | ID=cds.MS.gene35437.t1;Parent=MS.gene35437.t1 |
| Gene Sequence |
| Protein sequence |
