Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37936.t1 | XP_003617791.1 | 99.3 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 9.00E-158 | 566.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37936.t1 | Q69ZQ2 | 49.2 | 299 | 136 | 6 | 1 | 299 | 1 | 283 | 9.0e-58 | 225.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37936.t1 | G7K4N4 | 99.3 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 6.5e-158 | 566.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051003 | MS.gene37936 | 0.806045 | 9.95E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene37936 | 0.810337 | 1.21E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene37936 | 0.804126 | 2.51E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene37936 | 0.859222 | 4.80E-63 | -1.69E-46 |
| MS.gene055841 | MS.gene37936 | 0.803748 | 3.01E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene37936 | 0.813225 | 2.85E-51 | -1.69E-46 |
| MS.gene057705 | MS.gene37936 | 0.83054 | 2.77E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene37936 | 0.820648 | 6.14E-53 | -1.69E-46 |
| MS.gene059901 | MS.gene37936 | -0.807032 | 6.16E-50 | -1.69E-46 |
| MS.gene059935 | MS.gene37936 | 0.835369 | 1.75E-56 | -1.69E-46 |
| MS.gene060429 | MS.gene37936 | 0.814249 | 1.70E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37936 | MS.gene024669 | PPI |
| MS.gene37936 | MS.gene66329 | PPI |
| MS.gene75072 | MS.gene37936 | PPI |
| MS.gene37936 | MS.gene053443 | PPI |
| MS.gene030285 | MS.gene37936 | PPI |
| MS.gene37936 | MS.gene022597 | PPI |
| MS.gene53517 | MS.gene37936 | PPI |
| MS.gene82776 | MS.gene37936 | PPI |
| MS.gene053099 | MS.gene37936 | PPI |
| MS.gene37936 | MS.gene073888 | PPI |
| MS.gene37936 | MS.gene01351 | PPI |
| MS.gene032681 | MS.gene37936 | PPI |
| MS.gene072740 | MS.gene37936 | PPI |
| MS.gene66321 | MS.gene37936 | PPI |
| MS.gene37936 | MS.gene002376 | PPI |
| MS.gene37936 | MS.gene047509 | PPI |
| MS.gene21651 | MS.gene37936 | PPI |
| MS.gene37936 | MS.gene22321 | PPI |
| MS.gene37936 | MS.gene064051 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37936.t1 | MTR_5g095510 | 99.340 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37936.t1 | AT3G18790 | 76.238 | 303 | 69 | 2 | 1 | 303 | 1 | 300 | 1.84e-149 | 421 |
Find 99 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTGCTTATTATGGTTAT+AGG | 0.163690 | 5.1:+76295934 | MS.gene37936:CDS |
| AGGATTAATGCTGCTTATTA+TGG | 0.220615 | 5.1:+76295927 | MS.gene37936:CDS |
| AGAAAAGGACGGCGTTCTTT+AGG | 0.280108 | 5.1:-76295522 | None:intergenic |
| TGCTGCTTATTATGGTTATA+GGG | 0.299741 | 5.1:+76295935 | MS.gene37936:CDS |
| GGATGATGAAGATGGGATAT+TGG | 0.324169 | 5.1:+76295956 | MS.gene37936:CDS |
| GGGCCGGGGTATAGATATTT+TGG | 0.329847 | 5.1:+76295816 | MS.gene37936:CDS |
| GAGGGAGATGAGGGAGAGGT+TGG | 0.336839 | 5.1:+76296169 | MS.gene37936:CDS |
| TTCGTTGAGGTCACGGCATT+CGG | 0.348118 | 5.1:-76295550 | None:intergenic |
| GCAGAATGCCTCGCATAATT+CGG | 0.368301 | 5.1:-76295738 | None:intergenic |
| GTATGTCAGTGATGAGCTTA+TGG | 0.373343 | 5.1:+76296292 | MS.gene37936:CDS |
| GAGAGGAGAATTGTTGAACT+TGG | 0.401681 | 5.1:+76295711 | MS.gene37936:CDS |
| GGGAGAGGTTGGATAGGATA+AGG | 0.401870 | 5.1:+76296033 | MS.gene37936:CDS |
| TTCTCAATCTCTTTCTCATC+CGG | 0.403897 | 5.1:-76296230 | None:intergenic |
| CAGCAAATCATGCGCGAAAT+CGG | 0.407567 | 5.1:+76295588 | MS.gene37936:CDS |
| GATTTGCTGACGCCATTTGT+CGG | 0.414253 | 5.1:-76295574 | None:intergenic |
| TGTTGTGCATGTGCCATTGC+CGG | 0.419890 | 5.1:+76296211 | MS.gene37936:CDS |
| ATTGGAGCGGGTTGAGGCAC+CGG | 0.422542 | 5.1:+76295974 | MS.gene37936:CDS |
| TGAGAAAGAGATTGAGAAGA+TGG | 0.425940 | 5.1:+76296235 | MS.gene37936:CDS |
| TTCTGCGAAAATGACTGATT+TGG | 0.430591 | 5.1:+76295755 | MS.gene37936:CDS |
| AGCCGCCAGAGTTGAGGAAA+CGG | 0.430737 | 5.1:+76295880 | MS.gene37936:CDS |
| AGAGGTTGGATGAGAAAGAA+AGG | 0.431855 | 5.1:+76296183 | MS.gene37936:CDS |
| GATGAAGGAGAGGGAGATGA+GGG | 0.439819 | 5.1:+76296160 | MS.gene37936:CDS |
| GGTTGAGGAGTGGGAGAGGT+TGG | 0.442822 | 5.1:+76296022 | MS.gene37936:CDS |
| TATGAGGCGGGAGGCGGTTG+AGG | 0.445034 | 5.1:+76296007 | MS.gene37936:CDS |
| GCGGGAGGCGGTTGAGGAGT+GGG | 0.448024 | 5.1:+76296013 | MS.gene37936:CDS |
| GGAGGAAGAGGATGTGGTGG+AGG | 0.450447 | 5.1:+76296130 | MS.gene37936:CDS |
| AGGATGTGGTGGAGGAAGAG+AGG | 0.451153 | 5.1:+76296138 | MS.gene37936:CDS |
| AGGAAGAGAGGATGAAGGAG+AGG | 0.452014 | 5.1:+76296150 | MS.gene37936:CDS |
| TCTGAATCTCGGCGACTTTG+CGG | 0.453679 | 5.1:-76295611 | None:intergenic |
| CGAGATATGATATTTATAAG+AGG | 0.453995 | 5.1:+76295907 | MS.gene37936:CDS |
| GCGGGTTGAGGCACCGGCTG+AGG | 0.458475 | 5.1:+76295980 | MS.gene37936:CDS |
| CTAGGAAGGCTGTGAGGAGT+GGG | 0.459243 | 5.1:+76296063 | MS.gene37936:CDS |
| ACCTCAACGAAGCCGACAAA+TGG | 0.465609 | 5.1:+76295562 | MS.gene37936:CDS |
| GGATGAAGGAGAGGGAGATG+AGG | 0.468850 | 5.1:+76296159 | MS.gene37936:CDS |
| ATAGGATAAGGAAGGAAGCT+AGG | 0.470791 | 5.1:+76296045 | MS.gene37936:CDS |
| AGGAGAGGGAGATGAGGGAG+AGG | 0.482030 | 5.1:+76296165 | MS.gene37936:CDS |
| GAGGAGTGGGGAGGTTGTTG+AGG | 0.482912 | 5.1:+76296076 | MS.gene37936:CDS |
| TGTCGGCTTCGTTGAGGTCA+CGG | 0.485850 | 5.1:-76295557 | None:intergenic |
| TGGGATATTGGAGCGGGTTG+AGG | 0.487195 | 5.1:+76295968 | MS.gene37936:CDS |
| CGCCTCATACATTCCTCAGC+CGG | 0.489139 | 5.1:-76295993 | None:intergenic |
| AGGCGGTTGAGGAGTGGGAG+AGG | 0.491691 | 5.1:+76296018 | MS.gene37936:CDS |
| GGTTATAGGGATGATGAAGA+TGG | 0.495151 | 5.1:+76295948 | MS.gene37936:CDS |
| TGGTGCGGCGAAGAAATTGC+CGG | 0.497574 | 5.1:+76295836 | MS.gene37936:CDS |
| AGGAGTGGGAGAGGTTGGAT+AGG | 0.498229 | 5.1:+76296027 | MS.gene37936:CDS |
| GGTGCGGCGAAGAAATTGCC+GGG | 0.501210 | 5.1:+76295837 | MS.gene37936:CDS |
| ATCTCTTTCTCATCCGGCAA+TGG | 0.505971 | 5.1:-76296224 | None:intergenic |
| AGAAGACGGATTTGTTGAAT+CGG | 0.512072 | 5.1:+76296270 | MS.gene37936:CDS |
| CGGCATTCGGAAGCGAGAAA+AGG | 0.513747 | 5.1:-76295537 | None:intergenic |
| GGTGGAGGAAGAGAGGATGA+AGG | 0.519325 | 5.1:+76296145 | MS.gene37936:CDS |
| TGAGGAGGAAGAGGATGTGG+TGG | 0.519928 | 5.1:+76296127 | MS.gene37936:CDS |
| GGAAGAGAGGATGAAGGAGA+GGG | 0.524110 | 5.1:+76296151 | MS.gene37936:CDS |
| ATGAAGATGGGATATTGGAG+CGG | 0.526437 | 5.1:+76295961 | MS.gene37936:CDS |
| GTTCCTAACCCTAGTGGAAG+GGG | 0.527308 | 5.1:+76295795 | MS.gene37936:CDS |
| GGCGGGAGGCGGTTGAGGAG+TGG | 0.530068 | 5.1:+76296012 | MS.gene37936:CDS |
| GTCCTCCGTTTCCTCAACTC+TGG | 0.530903 | 5.1:-76295885 | None:intergenic |
| GAGATTCAGAACGAAGGTCT+CGG | 0.533692 | 5.1:+76295624 | MS.gene37936:CDS |
| GATAAGGAAGGAAGCTAGGA+AGG | 0.534959 | 5.1:+76296049 | MS.gene37936:CDS |
| GATACTTCATGAGGAGGAAG+AGG | 0.539895 | 5.1:+76296118 | MS.gene37936:CDS |
| GCGAAAATGACTGATTTGGA+TGG | 0.540673 | 5.1:+76295759 | MS.gene37936:CDS |
| TTGAGGTTACTGCGGCTACG+AGG | 0.542022 | 5.1:+76296093 | MS.gene37936:CDS |
| GCTAGGAAGGCTGTGAGGAG+TGG | 0.544777 | 5.1:+76296062 | MS.gene37936:CDS |
| CACCGGCTGAGGAATGTATG+AGG | 0.544927 | 5.1:+76295991 | MS.gene37936:CDS |
| TTGAGAAGCCGCCAGAGTTG+AGG | 0.545601 | 5.1:+76295874 | MS.gene37936:CDS |
| TCATGAGGAGGAAGAGGATG+TGG | 0.548901 | 5.1:+76296124 | MS.gene37936:CDS |
| GGCTGAGGAATGTATGAGGC+GGG | 0.550661 | 5.1:+76295995 | MS.gene37936:CDS |
| GTTATAGGGATGATGAAGAT+GGG | 0.553326 | 5.1:+76295949 | MS.gene37936:CDS |
| GAGGTTGGATAGGATAAGGA+AGG | 0.556697 | 5.1:+76296037 | MS.gene37936:CDS |
| ATGTTCCTAACCCTAGTGGA+AGG | 0.561136 | 5.1:+76295793 | MS.gene37936:CDS |
| GAGGTTGGATGAGAAAGAAA+GGG | 0.566400 | 5.1:+76296184 | MS.gene37936:CDS |
| GGAATGTATGAGGCGGGAGG+CGG | 0.568894 | 5.1:+76296001 | MS.gene37936:CDS |
| GCCATTTGTCGGCTTCGTTG+AGG | 0.579484 | 5.1:-76295563 | None:intergenic |
| AGGAGAATTGTTGAACTTGG+AGG | 0.585154 | 5.1:+76295714 | MS.gene37936:CDS |
| GGAGGAGCAGACTGAAGCTA+AGG | 0.586889 | 5.1:+76296313 | MS.gene37936:CDS |
| TGAAGATGGGATATTGGAGC+GGG | 0.592242 | 5.1:+76295962 | MS.gene37936:CDS |
| GAGACCTTCGTTCTGAATCT+CGG | 0.596536 | 5.1:-76295622 | None:intergenic |
| GTTGATGTTCCTAACCCTAG+TGG | 0.600173 | 5.1:+76295789 | MS.gene37936:CDS |
| TGTTCCTAACCCTAGTGGAA+GGG | 0.609021 | 5.1:+76295794 | MS.gene37936:CDS |
| TAGGAAGGCTGTGAGGAGTG+GGG | 0.611922 | 5.1:+76296064 | MS.gene37936:CDS |
| CGAAAATGACTGATTTGGAT+GGG | 0.613601 | 5.1:+76295760 | MS.gene37936:CDS |
| CGGCTGAGGAATGTATGAGG+CGG | 0.623295 | 5.1:+76295994 | MS.gene37936:CDS |
| TGAGGTTACTGCGGCTACGA+GGG | 0.625438 | 5.1:+76296094 | MS.gene37936:CDS |
| CTCCGTTTCCTCAACTCTGG+CGG | 0.627535 | 5.1:-76295882 | None:intergenic |
| GTGCGGCGAAGAAATTGCCG+GGG | 0.629933 | 5.1:+76295838 | MS.gene37936:CDS |
| ATTCGGAAGCGAGAAAAGGA+CGG | 0.632653 | 5.1:-76295533 | None:intergenic |
| CGTCGTTGAGATCACGAAGA+CGG | 0.646415 | 5.1:-76295653 | None:intergenic |
| GAAGGCTGTGAGGAGTGGGG+AGG | 0.648471 | 5.1:+76296067 | MS.gene37936:CDS |
| GAGGGAGATACTTCATGAGG+AGG | 0.648473 | 5.1:+76296112 | MS.gene37936:CDS |
| GCACCAAAATATCTATACCC+CGG | 0.652148 | 5.1:-76295819 | None:intergenic |
| GGTGTTGCAGAAGAAGAAGA+CGG | 0.654804 | 5.1:+76296256 | MS.gene37936:CDS |
| TTCCTAACCCTAGTGGAAGG+GGG | 0.659153 | 5.1:+76295796 | MS.gene37936:CDS |
| TACGAGGGAGATACTTCATG+AGG | 0.667838 | 5.1:+76296109 | MS.gene37936:CDS |
| TGAGGAATGTATGAGGCGGG+AGG | 0.670206 | 5.1:+76295998 | MS.gene37936:CDS |
| CGCCAGAGTTGAGGAAACGG+AGG | 0.674224 | 5.1:+76295883 | MS.gene37936:CDS |
| TGCGGCGAAGAAATTGCCGG+GGG | 0.684263 | 5.1:+76295839 | MS.gene37936:CDS |
| GTCGCCGAGATTCAGAACGA+AGG | 0.688122 | 5.1:+76295618 | MS.gene37936:CDS |
| TGTCAGTGATGAGCTTATGG+AGG | 0.691036 | 5.1:+76296295 | MS.gene37936:CDS |
| GGAGGTTGTTGAGGTTACTG+CGG | 0.696634 | 5.1:+76296085 | MS.gene37936:CDS |
| TTGGAGGACCGAATTATGCG+AGG | 0.697815 | 5.1:+76295730 | MS.gene37936:CDS |
| AGGAAGCTAGGAAGGCTGTG+AGG | 0.701271 | 5.1:+76296057 | MS.gene37936:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CGAGATATGATATTTATAAG+AGG | + | chr5.1:76295907-76295926 | MS.gene37936:CDS | 25.0% |
| ! | AGGATTAATGCTGCTTATTA+TGG | + | chr5.1:76295927-76295946 | MS.gene37936:CDS | 30.0% |
| ! | ATGCTGCTTATTATGGTTAT+AGG | + | chr5.1:76295934-76295953 | MS.gene37936:CDS | 30.0% |
| ! | TGCTGCTTATTATGGTTATA+GGG | + | chr5.1:76295935-76295954 | MS.gene37936:CDS | 30.0% |
| CATTCGTGAAAAATCGCATT+GGG | + | chr5.1:76295689-76295708 | MS.gene37936:CDS | 35.0% | |
| GTTATAGGGATGATGAAGAT+GGG | + | chr5.1:76295949-76295968 | MS.gene37936:CDS | 35.0% | |
| TCATTCGTGAAAAATCGCAT+TGG | + | chr5.1:76295688-76295707 | MS.gene37936:CDS | 35.0% | |
| TGAGAAAGAGATTGAGAAGA+TGG | + | chr5.1:76296235-76296254 | MS.gene37936:CDS | 35.0% | |
| TTCTCAATCTCTTTCTCATC+CGG | - | chr5.1:76296233-76296252 | None:intergenic | 35.0% | |
| TTCTGCGAAAATGACTGATT+TGG | + | chr5.1:76295755-76295774 | MS.gene37936:CDS | 35.0% | |
| ! | CTTCTTTTCTTCAGCTTTCA+TGG | - | chr5.1:76295499-76295518 | None:intergenic | 35.0% |
| !! | AGAAGACGGATTTGTTGAAT+CGG | + | chr5.1:76296270-76296289 | MS.gene37936:CDS | 35.0% |
| !! | CGAAAATGACTGATTTGGAT+GGG | + | chr5.1:76295760-76295779 | MS.gene37936:CDS | 35.0% |
| AGAGGTTGGATGAGAAAGAA+AGG | + | chr5.1:76296183-76296202 | MS.gene37936:CDS | 40.0% | |
| AGGAGAATTGTTGAACTTGG+AGG | + | chr5.1:76295714-76295733 | MS.gene37936:CDS | 40.0% | |
| ATAGGATAAGGAAGGAAGCT+AGG | + | chr5.1:76296045-76296064 | MS.gene37936:CDS | 40.0% | |
| ATGAAGATGGGATATTGGAG+CGG | + | chr5.1:76295961-76295980 | MS.gene37936:CDS | 40.0% | |
| GAGAGGAGAATTGTTGAACT+TGG | + | chr5.1:76295711-76295730 | MS.gene37936:CDS | 40.0% | |
| GAGGTTGGATGAGAAAGAAA+GGG | + | chr5.1:76296184-76296203 | MS.gene37936:CDS | 40.0% | |
| GCACCAAAATATCTATACCC+CGG | - | chr5.1:76295822-76295841 | None:intergenic | 40.0% | |
| GGATGATGAAGATGGGATAT+TGG | + | chr5.1:76295956-76295975 | MS.gene37936:CDS | 40.0% | |
| GGTTATAGGGATGATGAAGA+TGG | + | chr5.1:76295948-76295967 | MS.gene37936:CDS | 40.0% | |
| GTATGTCAGTGATGAGCTTA+TGG | + | chr5.1:76296292-76296311 | MS.gene37936:CDS | 40.0% | |
| !! | GCGAAAATGACTGATTTGGA+TGG | + | chr5.1:76295759-76295778 | MS.gene37936:CDS | 40.0% |
| !!! | GGGGTATAGATATTTTGGTG+CGG | + | chr5.1:76295821-76295840 | MS.gene37936:CDS | 40.0% |
| AGAAAAGGACGGCGTTCTTT+AGG | - | chr5.1:76295525-76295544 | None:intergenic | 45.0% | |
| ATCTCTTTCTCATCCGGCAA+TGG | - | chr5.1:76296227-76296246 | None:intergenic | 45.0% | |
| ATGTTCCTAACCCTAGTGGA+AGG | + | chr5.1:76295793-76295812 | MS.gene37936:CDS | 45.0% | |
| ATTCGGAAGCGAGAAAAGGA+CGG | - | chr5.1:76295536-76295555 | None:intergenic | 45.0% | |
| CAGCAAATCATGCGCGAAAT+CGG | + | chr5.1:76295588-76295607 | MS.gene37936:CDS | 45.0% | |
| GAGATTCAGAACGAAGGTCT+CGG | + | chr5.1:76295624-76295643 | MS.gene37936:CDS | 45.0% | |
| GAGGTTGGATAGGATAAGGA+AGG | + | chr5.1:76296037-76296056 | MS.gene37936:CDS | 45.0% | |
| GATAAGGAAGGAAGCTAGGA+AGG | + | chr5.1:76296049-76296068 | MS.gene37936:CDS | 45.0% | |
| GATACTTCATGAGGAGGAAG+AGG | + | chr5.1:76296118-76296137 | MS.gene37936:CDS | 45.0% | |
| GCAGAATGCCTCGCATAATT+CGG | - | chr5.1:76295741-76295760 | None:intergenic | 45.0% | |
| GTGAAAAATCGCATTGGGAG+AGG | + | chr5.1:76295694-76295713 | MS.gene37936:CDS | 45.0% | |
| GTTGATGTTCCTAACCCTAG+TGG | + | chr5.1:76295789-76295808 | MS.gene37936:CDS | 45.0% | |
| TACGAGGGAGATACTTCATG+AGG | + | chr5.1:76296109-76296128 | MS.gene37936:CDS | 45.0% | |
| TGAAGATGGGATATTGGAGC+GGG | + | chr5.1:76295962-76295981 | MS.gene37936:CDS | 45.0% | |
| TGTCAGTGATGAGCTTATGG+AGG | + | chr5.1:76296295-76296314 | MS.gene37936:CDS | 45.0% | |
| TGTTCCTAACCCTAGTGGAA+GGG | + | chr5.1:76295794-76295813 | MS.gene37936:CDS | 45.0% | |
| ! | GAGACCTTCGTTCTGAATCT+CGG | - | chr5.1:76295625-76295644 | None:intergenic | 45.0% |
| ! | GGTGTTGCAGAAGAAGAAGA+CGG | + | chr5.1:76296256-76296275 | MS.gene37936:CDS | 45.0% |
| !! | GATTTGCTGACGCCATTTGT+CGG | - | chr5.1:76295577-76295596 | None:intergenic | 45.0% |
| ACCTCAACGAAGCCGACAAA+TGG | + | chr5.1:76295562-76295581 | MS.gene37936:CDS | 50.0% | |
| AGGAAGAGAGGATGAAGGAG+AGG | + | chr5.1:76296150-76296169 | MS.gene37936:CDS | 50.0% | |
| CGTCGTTGAGATCACGAAGA+CGG | - | chr5.1:76295656-76295675 | None:intergenic | 50.0% | |
| GAAGAAATTGCCGGGGGTTA+GGG | + | chr5.1:76295845-76295864 | MS.gene37936:CDS | 50.0% | |
| GAGGGAGATACTTCATGAGG+AGG | + | chr5.1:76296112-76296131 | MS.gene37936:CDS | 50.0% | |
| GATGAAGGAGAGGGAGATGA+GGG | + | chr5.1:76296160-76296179 | MS.gene37936:CDS | 50.0% | |
| GGAAGAGAGGATGAAGGAGA+GGG | + | chr5.1:76296151-76296170 | MS.gene37936:CDS | 50.0% | |
| GGAGGTTGTTGAGGTTACTG+CGG | + | chr5.1:76296085-76296104 | MS.gene37936:CDS | 50.0% | |
| GGGAGAGGTTGGATAGGATA+AGG | + | chr5.1:76296033-76296052 | MS.gene37936:CDS | 50.0% | |
| GTTCCTAACCCTAGTGGAAG+GGG | + | chr5.1:76295795-76295814 | MS.gene37936:CDS | 50.0% | |
| TCAAAAAGCTCCCTAACCCC+CGG | - | chr5.1:76295858-76295877 | None:intergenic | 50.0% | |
| TCATGAGGAGGAAGAGGATG+TGG | + | chr5.1:76296124-76296143 | MS.gene37936:CDS | 50.0% | |
| TCTGAATCTCGGCGACTTTG+CGG | - | chr5.1:76295614-76295633 | None:intergenic | 50.0% | |
| TTCCTAACCCTAGTGGAAGG+GGG | + | chr5.1:76295796-76295815 | MS.gene37936:CDS | 50.0% | |
| TTCGTTGAGGTCACGGCATT+CGG | - | chr5.1:76295553-76295572 | None:intergenic | 50.0% | |
| TTGGAGGACCGAATTATGCG+AGG | + | chr5.1:76295730-76295749 | MS.gene37936:CDS | 50.0% | |
| ! | GGGCCGGGGTATAGATATTT+TGG | + | chr5.1:76295816-76295835 | MS.gene37936:CDS | 50.0% |
| ! | TGTTGTGCATGTGCCATTGC+CGG | + | chr5.1:76296211-76296230 | MS.gene37936:CDS | 50.0% |
| AGCCGCCAGAGTTGAGGAAA+CGG | + | chr5.1:76295880-76295899 | MS.gene37936:CDS | 55.0% | |
| AGGAAGCTAGGAAGGCTGTG+AGG | + | chr5.1:76296057-76296076 | MS.gene37936:CDS | 55.0% | |
| AGGAGTGGGAGAGGTTGGAT+AGG | + | chr5.1:76296027-76296046 | MS.gene37936:CDS | 55.0% | |
| CGAAGAAATTGCCGGGGGTT+AGG | + | chr5.1:76295844-76295863 | MS.gene37936:CDS | 55.0% | |
| CGCCTCATACATTCCTCAGC+CGG | - | chr5.1:76295996-76296015 | None:intergenic | 55.0% | |
| CGGCATTCGGAAGCGAGAAA+AGG | - | chr5.1:76295540-76295559 | None:intergenic | 55.0% | |
| CGGCTGAGGAATGTATGAGG+CGG | + | chr5.1:76295994-76296013 | MS.gene37936:CDS | 55.0% | |
| CTAGGAAGGCTGTGAGGAGT+GGG | + | chr5.1:76296063-76296082 | MS.gene37936:CDS | 55.0% | |
| CTCCGTTTCCTCAACTCTGG+CGG | - | chr5.1:76295885-76295904 | None:intergenic | 55.0% | |
| GGAGGAGCAGACTGAAGCTA+AGG | + | chr5.1:76296313-76296332 | MS.gene37936:CDS | 55.0% | |
| GGATGAAGGAGAGGGAGATG+AGG | + | chr5.1:76296159-76296178 | MS.gene37936:CDS | 55.0% | |
| GGCTGAGGAATGTATGAGGC+GGG | + | chr5.1:76295995-76296014 | MS.gene37936:CDS | 55.0% | |
| GGTGGAGGAAGAGAGGATGA+AGG | + | chr5.1:76296145-76296164 | MS.gene37936:CDS | 55.0% | |
| GTCCTCCGTTTCCTCAACTC+TGG | - | chr5.1:76295888-76295907 | None:intergenic | 55.0% | |
| GTCGCCGAGATTCAGAACGA+AGG | + | chr5.1:76295618-76295637 | MS.gene37936:CDS | 55.0% | |
| TAGGAAGGCTGTGAGGAGTG+GGG | + | chr5.1:76296064-76296083 | MS.gene37936:CDS | 55.0% | |
| TGAGGAATGTATGAGGCGGG+AGG | + | chr5.1:76295998-76296017 | MS.gene37936:CDS | 55.0% | |
| TGAGGAGGAAGAGGATGTGG+TGG | + | chr5.1:76296127-76296146 | MS.gene37936:CDS | 55.0% | |
| TGAGGTTACTGCGGCTACGA+GGG | + | chr5.1:76296094-76296113 | MS.gene37936:CDS | 55.0% | |
| TGGTGCGGCGAAGAAATTGC+CGG | + | chr5.1:76295836-76295855 | MS.gene37936:CDS | 55.0% | |
| TTGAGAAGCCGCCAGAGTTG+AGG | + | chr5.1:76295874-76295893 | MS.gene37936:CDS | 55.0% | |
| TTGAGGTTACTGCGGCTACG+AGG | + | chr5.1:76296093-76296112 | MS.gene37936:CDS | 55.0% | |
| ! | AGGATGTGGTGGAGGAAGAG+AGG | + | chr5.1:76296138-76296157 | MS.gene37936:CDS | 55.0% |
| ! | CACCGGCTGAGGAATGTATG+AGG | + | chr5.1:76295991-76296010 | MS.gene37936:CDS | 55.0% |
| !! | GCCATTTGTCGGCTTCGTTG+AGG | - | chr5.1:76295566-76295585 | None:intergenic | 55.0% |
| !! | TGGGATATTGGAGCGGGTTG+AGG | + | chr5.1:76295968-76295987 | MS.gene37936:CDS | 55.0% |
| !! | TGTCGGCTTCGTTGAGGTCA+CGG | - | chr5.1:76295560-76295579 | None:intergenic | 55.0% |
| AGGAGAGGGAGATGAGGGAG+AGG | + | chr5.1:76296165-76296184 | MS.gene37936:CDS | 60.0% | |
| CGCCAGAGTTGAGGAAACGG+AGG | + | chr5.1:76295883-76295902 | MS.gene37936:CDS | 60.0% | |
| GAGGAGTGGGGAGGTTGTTG+AGG | + | chr5.1:76296076-76296095 | MS.gene37936:CDS | 60.0% | |
| GAGGGAGATGAGGGAGAGGT+TGG | + | chr5.1:76296169-76296188 | MS.gene37936:CDS | 60.0% | |
| GCTAGGAAGGCTGTGAGGAG+TGG | + | chr5.1:76296062-76296081 | MS.gene37936:CDS | 60.0% | |
| GGAATGTATGAGGCGGGAGG+CGG | + | chr5.1:76296001-76296020 | MS.gene37936:CDS | 60.0% | |
| GGAGGAAGAGGATGTGGTGG+AGG | + | chr5.1:76296130-76296149 | MS.gene37936:CDS | 60.0% | |
| GGTGCGGCGAAGAAATTGCC+GGG | + | chr5.1:76295837-76295856 | MS.gene37936:CDS | 60.0% | |
| GGTTGAGGAGTGGGAGAGGT+TGG | + | chr5.1:76296022-76296041 | MS.gene37936:CDS | 60.0% | |
| GTGCGGCGAAGAAATTGCCG+GGG | + | chr5.1:76295838-76295857 | MS.gene37936:CDS | 60.0% | |
| TAACCCTAGTGGAAGGGGGC+CGG | + | chr5.1:76295800-76295819 | MS.gene37936:CDS | 60.0% | |
| TGCGGCGAAGAAATTGCCGG+GGG | + | chr5.1:76295839-76295858 | MS.gene37936:CDS | 60.0% | |
| !! | ATTGGAGCGGGTTGAGGCAC+CGG | + | chr5.1:76295974-76295993 | MS.gene37936:CDS | 60.0% |
| AACCCTAGTGGAAGGGGGCC+GGG | + | chr5.1:76295801-76295820 | MS.gene37936:CDS | 65.0% | |
| AGGCGGTTGAGGAGTGGGAG+AGG | + | chr5.1:76296018-76296037 | MS.gene37936:CDS | 65.0% | |
| GAAGGCTGTGAGGAGTGGGG+AGG | + | chr5.1:76296067-76296086 | MS.gene37936:CDS | 65.0% | |
| GGCCCCCTTCCACTAGGGTT+AGG | - | chr5.1:76295801-76295820 | None:intergenic | 65.0% | |
| TATGAGGCGGGAGGCGGTTG+AGG | + | chr5.1:76296007-76296026 | MS.gene37936:CDS | 65.0% | |
| ACCCCGGCCCCCTTCCACTA+GGG | - | chr5.1:76295806-76295825 | None:intergenic | 70.0% | |
| ACCCTAGTGGAAGGGGGCCG+GGG | + | chr5.1:76295802-76295821 | MS.gene37936:CDS | 70.0% | |
| GCGGGAGGCGGTTGAGGAGT+GGG | + | chr5.1:76296013-76296032 | MS.gene37936:CDS | 70.0% | |
| TACCCCGGCCCCCTTCCACT+AGG | - | chr5.1:76295807-76295826 | None:intergenic | 70.0% | |
| GGCGGGAGGCGGTTGAGGAG+TGG | + | chr5.1:76296012-76296031 | MS.gene37936:CDS | 75.0% | |
| !! | GCGGGTTGAGGCACCGGCTG+AGG | + | chr5.1:76295980-76295999 | MS.gene37936:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 76295447 | 76296358 | 76295447 | ID=MS.gene37936 |
| chr5.1 | mRNA | 76295447 | 76296358 | 76295447 | ID=MS.gene37936.t1;Parent=MS.gene37936 |
| chr5.1 | exon | 76295447 | 76296358 | 76295447 | ID=MS.gene37936.t1.exon1;Parent=MS.gene37936.t1 |
| chr5.1 | CDS | 76295447 | 76296358 | 76295447 | ID=cds.MS.gene37936.t1;Parent=MS.gene37936.t1 |
| Gene Sequence |
| Protein sequence |
