Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38011.t1 | XP_024632737.1 | 85.6 | 731 | 100 | 2 | 1 | 728 | 1 | 729 | 0.00E+00 | 1278.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38011.t1 | A0A396GU28 | 51.0 | 1028 | 435 | 10 | 27 | 1026 | 54 | 1040 | 4.4e-283 | 983.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene38011 | 0.807982 | 3.87E-50 | -1.69E-46 |
| MS.gene049531 | MS.gene38011 | 0.806855 | 6.72E-50 | -1.69E-46 |
| MS.gene049701 | MS.gene38011 | 0.828278 | 9.82E-55 | -1.69E-46 |
| MS.gene050026 | MS.gene38011 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene050221 | MS.gene38011 | 0.818671 | 1.74E-52 | -1.69E-46 |
| MS.gene050430 | MS.gene38011 | 0.800631 | 1.32E-48 | -1.69E-46 |
| MS.gene051181 | MS.gene38011 | 0.809691 | 1.67E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene38011 | 0.81503 | 1.14E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene38011 | 0.809108 | 2.23E-50 | -1.69E-46 |
| MS.gene051492 | MS.gene38011 | 0.800142 | 1.66E-48 | -1.69E-46 |
| MS.gene051594 | MS.gene38011 | 0.807173 | 5.75E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene38011 | 0.813316 | 2.72E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene38011 | 0.810563 | 1.08E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene38011 | 0.803004 | 4.29E-49 | -1.69E-46 |
| MS.gene053641 | MS.gene38011 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene053647 | MS.gene38011 | 0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene38011 | 0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene38011 | 0.807181 | 5.73E-50 | -1.69E-46 |
| MS.gene05422 | MS.gene38011 | 0.807034 | 6.16E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene38011 | 0.800708 | 1.27E-48 | -1.69E-46 |
| MS.gene05423 | MS.gene38011 | 0.824994 | 5.97E-54 | -1.69E-46 |
| MS.gene054291 | MS.gene38011 | -0.809925 | 1.49E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene38011 | 0.813611 | 2.34E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene38011 | 0.821973 | 3.04E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene38011 | 0.820982 | 5.14E-53 | -1.69E-46 |
| MS.gene055056 | MS.gene38011 | 0.824131 | 9.53E-54 | -1.69E-46 |
| MS.gene055228 | MS.gene38011 | 0.817152 | 3.82E-52 | -1.69E-46 |
| MS.gene055357 | MS.gene38011 | 0.818169 | 2.26E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene38011 | 0.824061 | 9.90E-54 | -1.69E-46 |
| MS.gene056854 | MS.gene38011 | 0.802758 | 4.82E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene38011 | 0.803704 | 3.07E-49 | -1.69E-46 |
| MS.gene058515 | MS.gene38011 | 0.823984 | 1.03E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene38011 | 0.803272 | 3.77E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene38011 | 0.800451 | 1.43E-48 | -1.69E-46 |
| MS.gene05925 | MS.gene38011 | 0.834883 | 2.32E-56 | -1.69E-46 |
| MS.gene059272 | MS.gene38011 | 0.802968 | 4.36E-49 | -1.69E-46 |
| MS.gene059276 | MS.gene38011 | 0.836648 | 8.27E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38011.t1 | MTR_8g070580 | 54.217 | 498 | 141 | 9 | 1 | 498 | 1 | 411 | 1.68e-163 | 491 |
| MS.gene38011.t1 | MTR_4g028910 | 42.500 | 320 | 113 | 5 | 130 | 447 | 160 | 410 | 6.88e-71 | 243 |
| MS.gene38011.t1 | MTR_2g048835 | 31.061 | 264 | 151 | 4 | 586 | 848 | 191 | 424 | 2.37e-32 | 132 |
| MS.gene38011.t1 | MTR_8g464800 | 33.516 | 182 | 120 | 1 | 574 | 754 | 1 | 182 | 1.31e-29 | 122 |
| MS.gene38011.t1 | MTR_7g090610 | 29.224 | 219 | 131 | 2 | 630 | 848 | 1 | 195 | 1.59e-24 | 107 |
| MS.gene38011.t1 | MTR_5g081480 | 30.797 | 276 | 144 | 8 | 717 | 983 | 651 | 888 | 4.36e-24 | 109 |
| MS.gene38011.t1 | MTR_5g081480 | 32.530 | 166 | 99 | 3 | 318 | 471 | 462 | 626 | 1.42e-20 | 98.6 |
| MS.gene38011.t1 | MTR_1g046450 | 70.690 | 58 | 17 | 0 | 392 | 449 | 1 | 58 | 3.29e-22 | 94.7 |
| MS.gene38011.t1 | MTR_6g462630 | 36.296 | 135 | 77 | 1 | 714 | 848 | 26 | 151 | 3.57e-21 | 93.6 |
| MS.gene38011.t1 | MTR_3g049490 | 31.429 | 245 | 98 | 7 | 782 | 1026 | 11 | 185 | 5.98e-20 | 89.0 |
| MS.gene38011.t1 | MTR_1g053290 | 36.296 | 135 | 59 | 3 | 374 | 494 | 79 | 200 | 7.21e-20 | 89.4 |
| MS.gene38011.t1 | MTR_0152s0010 | 47.368 | 76 | 40 | 0 | 590 | 665 | 1 | 76 | 1.20e-19 | 85.5 |
| MS.gene38011.t1 | MTR_0152s0060 | 40.351 | 114 | 52 | 2 | 557 | 669 | 17 | 115 | 1.95e-19 | 92.4 |
| MS.gene38011.t1 | MTR_1g041225 | 60.377 | 53 | 21 | 0 | 467 | 519 | 1 | 53 | 1.32e-14 | 71.6 |
| MS.gene38011.t1 | MTR_2g018850 | 24.599 | 187 | 128 | 5 | 354 | 528 | 302 | 487 | 2.39e-14 | 77.8 |
| MS.gene38011.t1 | MTR_6g022470 | 34.821 | 112 | 63 | 2 | 738 | 848 | 29 | 131 | 3.78e-14 | 74.3 |
| MS.gene38011.t1 | MTR_5g068970 | 55.357 | 56 | 25 | 0 | 535 | 590 | 46 | 101 | 1.40e-13 | 68.2 |
| MS.gene38011.t1 | MTR_6g059380 | 44.000 | 75 | 41 | 1 | 24 | 97 | 440 | 514 | 1.83e-13 | 74.7 |
| MS.gene38011.t1 | MTR_8g040660 | 29.714 | 175 | 70 | 5 | 673 | 846 | 13 | 135 | 1.54e-12 | 69.3 |
| MS.gene38011.t1 | MTR_2g020400 | 32.759 | 116 | 68 | 3 | 734 | 848 | 1 | 107 | 3.01e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38011.t1 | AT3G05850 | 27.703 | 592 | 383 | 13 | 274 | 848 | 207 | 770 | 2.95e-60 | 221 |
| MS.gene38011.t1 | AT1G06740 | 24.535 | 591 | 409 | 9 | 271 | 848 | 156 | 722 | 4.43e-53 | 199 |
| MS.gene38011.t1 | AT5G15685 | 30.640 | 297 | 202 | 3 | 248 | 541 | 153 | 448 | 8.53e-44 | 167 |
| MS.gene38011.t1 | AT1G64260 | 21.771 | 542 | 396 | 13 | 274 | 798 | 188 | 718 | 2.01e-26 | 117 |
| MS.gene38011.t1 | AT1G64260 | 21.771 | 542 | 396 | 13 | 274 | 798 | 188 | 718 | 2.01e-26 | 117 |
| MS.gene38011.t1 | AT1G64255 | 22.059 | 544 | 375 | 12 | 274 | 789 | 195 | 717 | 5.75e-18 | 89.7 |
| MS.gene38011.t1 | AT1G64253 | 22.443 | 352 | 249 | 10 | 480 | 815 | 3 | 346 | 4.84e-14 | 75.9 |
Find 228 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGACTGTGTTGATTTCTTT+TGG | 0.156896 | 5.1:+77184608 | None:intergenic |
| CTTAGCTGGCCCTTTCTTCT+TGG | 0.184981 | 5.1:+77184370 | None:intergenic |
| TTGCTAAACCTCATGTAAAA+TGG | 0.191414 | 5.1:+77186320 | None:intergenic |
| TCATACGAGGTGTGAGTTTC+AGG | 0.226070 | 5.1:+77186180 | None:intergenic |
| TTATTATCTCCACTCCAATT+TGG | 0.239817 | 5.1:+77185089 | None:intergenic |
| ACTACTTGTAGACCATTAAT+TGG | 0.242604 | 5.1:-77185894 | MS.gene38011:CDS |
| TCAAGTTGTGGCCATAATTT+TGG | 0.255565 | 5.1:+77184756 | None:intergenic |
| GAGTTGCTCACAGTCTTCTT+TGG | 0.271354 | 5.1:+77184107 | None:intergenic |
| GGCCCTTTCTTCTTGGGTGC+AGG | 0.289632 | 5.1:+77184377 | None:intergenic |
| CCAATGTTCCTGCACTTCTT+AGG | 0.290734 | 5.1:+77184005 | None:intergenic |
| CCACCTGTTGCAACCAATAC+TGG | 0.295863 | 5.1:-77184221 | MS.gene38011:CDS |
| AGTCTTCTTTGGGTCAGTTT+TGG | 0.303068 | 5.1:+77184118 | None:intergenic |
| TCCAACAATTTGTTAATCAT+TGG | 0.308914 | 5.1:+77185143 | None:intergenic |
| CTGAGGGCTGGTCTCCAAAT+TGG | 0.311486 | 5.1:-77185103 | MS.gene38011:CDS |
| AATCTTGTGGCTGCAGGAAA+TGG | 0.312971 | 5.1:-77185007 | MS.gene38011:CDS |
| TCTCAAGTGCTGAACTAATT+AGG | 0.314072 | 5.1:-77186439 | MS.gene38011:CDS |
| AGACCATTAATTGGTCTAGA+TGG | 0.320166 | 5.1:-77185885 | MS.gene38011:CDS |
| TTAGCTGGCCCTTTCTTCTT+GGG | 0.325227 | 5.1:+77184371 | None:intergenic |
| TAAGTAGCTATCAGTTATAT+AGG | 0.331539 | 5.1:-77186109 | MS.gene38011:CDS |
| GCAGTTGTGGTTGCAGTTGA+TGG | 0.333822 | 5.1:+77184320 | None:intergenic |
| TCTTCAAGTCTTGATGCATT+AGG | 0.339547 | 5.1:+77186596 | None:intergenic |
| GCTAGATTTACAGTTTATAA+AGG | 0.340332 | 5.1:-77185062 | MS.gene38011:CDS |
| TCCAATGATTAACAAATTGT+TGG | 0.345748 | 5.1:-77185144 | MS.gene38011:CDS |
| CACCCATCTAGACCAATTAA+TGG | 0.348906 | 5.1:+77185882 | None:intergenic |
| TCTTGCCACCATATGTTAGA+AGG | 0.349630 | 5.1:-77184722 | MS.gene38011:CDS |
| CTTGGTGCTTTCTTCTTAGC+TGG | 0.350240 | 5.1:+77184356 | None:intergenic |
| ATGCTGTAGGTAGTTGGTCT+AGG | 0.352586 | 5.1:-77185352 | MS.gene38011:CDS |
| ACTATTTGTGGCTTTACAAT+TGG | 0.354142 | 5.1:+77184050 | None:intergenic |
| TACTTCAAATGTTCAAGCTT+TGG | 0.357622 | 5.1:-77186642 | MS.gene38011:CDS |
| GTTGGTCCAGTCTTGGTTGC+AGG | 0.357665 | 5.1:+77184266 | None:intergenic |
| GAAGAGAAAGTCTGATGAAA+TGG | 0.358822 | 5.1:-77183979 | MS.gene38011:CDS |
| GGACATTTACTAGCAGCAAT+TGG | 0.364397 | 5.1:-77185837 | MS.gene38011:CDS |
| GCTGATCATAAGTGTCATTA+TGG | 0.366763 | 5.1:-77186257 | MS.gene38011:CDS |
| CTAACATATGGTGGCAAGAT+TGG | 0.369890 | 5.1:+77184726 | None:intergenic |
| AGTTGCTCACAGTCTTCTTT+GGG | 0.372185 | 5.1:+77184108 | None:intergenic |
| GATACAATGGTTACTTTAGT+GGG | 0.374271 | 5.1:-77187138 | MS.gene38011:CDS |
| AGGGGTGATACTTATGAGTA+TGG | 0.376035 | 5.1:-77187094 | MS.gene38011:CDS |
| TTTGAAGTAACCACAGGTTC+AGG | 0.376587 | 5.1:+77186656 | None:intergenic |
| GTGAGAGAGTTAGGTGTAAA+GGG | 0.376858 | 5.1:-77187022 | MS.gene38011:CDS |
| TACTTTGAGGCATTGTTGTC+AGG | 0.377959 | 5.1:+77187647 | None:intergenic |
| GACTCATATGCTGTTAATCT+TGG | 0.379862 | 5.1:-77185035 | MS.gene38011:CDS |
| ATCCTAACTTTGAATACAAA+AGG | 0.380287 | 5.1:-77187114 | MS.gene38011:CDS |
| TTCAGATTCAAAAGGGGAAT+AGG | 0.382047 | 5.1:+77186817 | None:intergenic |
| GCCTCCTTCAATTGCTCACC+TGG | 0.384592 | 5.1:+77185476 | None:intergenic |
| GAAGAAAGCACCAAGCAAAA+AGG | 0.387960 | 5.1:-77184348 | MS.gene38011:CDS |
| TAGGTAGTTGGTCTAGGGCT+GGG | 0.388570 | 5.1:-77185346 | MS.gene38011:CDS |
| GTAGGTAGTTGGTCTAGGGC+TGG | 0.390401 | 5.1:-77185347 | MS.gene38011:CDS |
| ACTGACTGTTGTGTTCCAAT+AGG | 0.395150 | 5.1:+77183954 | None:intergenic |
| ATGCGCATATTGCTCATCTA+TGG | 0.396606 | 5.1:+77186052 | None:intergenic |
| AAGATGAAGTGGGTGGATAA+AGG | 0.398457 | 5.1:-77187725 | MS.gene38011:CDS |
| GCTGTTATATCTCTTGTTGA+TGG | 0.401233 | 5.1:-77185239 | MS.gene38011:CDS |
| ACATATATTCTCTGGAAAAC+AGG | 0.401643 | 5.1:+77185948 | None:intergenic |
| TCTGATGAAATGGAGCCTAT+TGG | 0.403360 | 5.1:-77183969 | MS.gene38011:CDS |
| GCTTGCACCAGGGGAGAATC+AGG | 0.407445 | 5.1:-77184514 | MS.gene38011:intron |
| GACAAGCTGGTGAGAGAGTT+AGG | 0.415444 | 5.1:-77187031 | MS.gene38011:CDS |
| TGCTAAACCTCATGTAAAAT+GGG | 0.420732 | 5.1:+77186321 | None:intergenic |
| GGTGAGAGAGTTAGGTGTAA+AGG | 0.421203 | 5.1:-77187023 | MS.gene38011:CDS |
| TCAGGATTTATCACTTGATC+AGG | 0.426463 | 5.1:+77186674 | None:intergenic |
| CCTGGTGCCCTTCTAACATA+TGG | 0.427162 | 5.1:+77184714 | None:intergenic |
| GTTCCACTTTCAGATTCAAA+AGG | 0.433601 | 5.1:+77186809 | None:intergenic |
| CTTGTAATGGACCAAAATTA+TGG | 0.435277 | 5.1:-77184767 | MS.gene38011:CDS |
| AATTGTAAAGCCACAAATAG+TGG | 0.436457 | 5.1:-77184048 | MS.gene38011:CDS |
| TTTATGTTAAGAAAAGTGAT+AGG | 0.437204 | 5.1:-77186376 | MS.gene38011:CDS |
| TTCAAATGTTCAAGCTTTGG+TGG | 0.440053 | 5.1:-77186639 | MS.gene38011:CDS |
| TCCACTACTGCAAATGCAAT+TGG | 0.441565 | 5.1:+77185789 | None:intergenic |
| GTCCATTACAAGGCAGTATG+AGG | 0.442151 | 5.1:+77184778 | None:intergenic |
| CAGATGACTATGTGGCTCAT+TGG | 0.444024 | 5.1:-77184923 | MS.gene38011:CDS |
| ATCTTGTGGCTGCAGGAAAT+GGG | 0.445707 | 5.1:-77185006 | MS.gene38011:CDS |
| CCACCTGCACCCAAGAAGAA+AGG | 0.447536 | 5.1:-77184380 | MS.gene38011:CDS |
| AAGGTTCATAGCTGAGTATA+AGG | 0.447934 | 5.1:-77186918 | MS.gene38011:CDS |
| AGATACAATGGTTACTTTAG+TGG | 0.447944 | 5.1:-77187139 | MS.gene38011:CDS |
| AAGTAGCTATCAGTTATATA+GGG | 0.450108 | 5.1:-77186108 | MS.gene38011:CDS |
| GCATCACCTGCAACCAAGAC+TGG | 0.452762 | 5.1:-77184272 | MS.gene38011:CDS |
| GATGCTTCTGTTGTGGTTGA+AGG | 0.452796 | 5.1:+77184290 | None:intergenic |
| TCTGTTGTGGTTGAAGGTGT+TGG | 0.455131 | 5.1:+77184296 | None:intergenic |
| CTAGCAGCAATTGGGAAAGA+TGG | 0.457434 | 5.1:-77185828 | MS.gene38011:CDS |
| CAATGAGCCACATAGTCATC+TGG | 0.458015 | 5.1:+77184924 | None:intergenic |
| GACATTTACTAGCAGCAATT+GGG | 0.459543 | 5.1:-77185836 | MS.gene38011:CDS |
| CAGTGTAAAGATAGTGATGC+TGG | 0.462404 | 5.1:-77185972 | MS.gene38011:CDS |
| GGATAAAGGCTTGAATCAAA+TGG | 0.464453 | 5.1:-77187711 | MS.gene38011:CDS |
| AAGTGATAGGAAGAGGGTTG+TGG | 0.464601 | 5.1:-77186363 | MS.gene38011:CDS |
| TTAAGAAAAGTGATAGGAAG+AGG | 0.467754 | 5.1:-77186370 | MS.gene38011:CDS |
| CCTTTCTTCTTGGGTGCAGG+TGG | 0.471125 | 5.1:+77184380 | None:intergenic |
| TCCTAACTTTGAATACAAAA+GGG | 0.472525 | 5.1:-77187113 | MS.gene38011:CDS |
| CACCTGCACCCAAGAAGAAA+GGG | 0.474069 | 5.1:-77184379 | MS.gene38011:CDS |
| TTCCACTTTCAGATTCAAAA+GGG | 0.474526 | 5.1:+77186810 | None:intergenic |
| CATTAATGAAGCTGCTTGGA+AGG | 0.475001 | 5.1:-77185387 | MS.gene38011:CDS |
| TGCAGCAGTTGGTCCAGTCT+TGG | 0.477619 | 5.1:+77184259 | None:intergenic |
| AATCTGTGCTCATGAGCATC+AGG | 0.478855 | 5.1:+77185539 | None:intergenic |
| CTGTTATATCTCTTGTTGAT+GGG | 0.479210 | 5.1:-77185238 | MS.gene38011:CDS |
| ACTGTGTGGTATGCTGTGGC+TGG | 0.479224 | 5.1:-77186992 | MS.gene38011:CDS |
| AGAACCACTCAGTGAGGATA+AGG | 0.481629 | 5.1:-77187165 | MS.gene38011:CDS |
| TAAGAGCAATTAAAAGTGAT+GGG | 0.484032 | 5.1:-77186949 | MS.gene38011:CDS |
| TGATTAACAAATTGTTGGAT+AGG | 0.484409 | 5.1:-77185139 | MS.gene38011:CDS |
| TGAAGGTGTTGGTGCAGTTG+TGG | 0.485630 | 5.1:+77184307 | None:intergenic |
| TATGAGGATAAAGAAATTGA+AGG | 0.486370 | 5.1:-77186162 | MS.gene38011:CDS |
| ACCAATTGCATTTGCAGTAG+TGG | 0.487833 | 5.1:-77185790 | MS.gene38011:CDS |
| AACCTCATACTGCCTTGTAA+TGG | 0.488394 | 5.1:-77184780 | MS.gene38011:CDS |
| TTGTGTGTTAAACATCTGTA+TGG | 0.489585 | 5.1:-77185518 | MS.gene38011:CDS |
| GCTTGAGGTTGTTGAACAGT+TGG | 0.490239 | 5.1:+77184404 | None:intergenic |
| TAGGGCTAAGAAGAAGTCTC+TGG | 0.490854 | 5.1:-77186090 | MS.gene38011:CDS |
| TTGGGTGCAGGTGGTGCTTG+AGG | 0.491428 | 5.1:+77184389 | None:intergenic |
| TGCTGTAGGTAGTTGGTCTA+GGG | 0.495408 | 5.1:-77185351 | MS.gene38011:CDS |
| GACTATATGTTAAGGTATGA+TGG | 0.497239 | 5.1:-77185176 | MS.gene38011:CDS |
| GGTCCAGTATTGGTTGCAAC+AGG | 0.498094 | 5.1:+77184218 | None:intergenic |
| TGAAACTCACACCTCGTATG+AGG | 0.499300 | 5.1:-77186178 | MS.gene38011:CDS |
| TCTGAAAGAGTTAGTGAGGA+TGG | 0.499774 | 5.1:-77186752 | MS.gene38011:CDS |
| AACTTAGAGACTATATGTTA+AGG | 0.500014 | 5.1:-77185184 | MS.gene38011:CDS |
| CCAGCTTGTCCAAGTCAACT+AGG | 0.500380 | 5.1:+77187044 | None:intergenic |
| TGAAAATGTATATCACAGAT+AGG | 0.500546 | 5.1:-77185214 | MS.gene38011:CDS |
| AAAGTGATGGGGATGTGGTA+AGG | 0.508822 | 5.1:-77186937 | MS.gene38011:CDS |
| GTTTGTACCTGATTCTCCCC+TGG | 0.510072 | 5.1:+77184507 | None:intergenic |
| AAACAAAGGACGCATGGGAC+TGG | 0.510481 | 5.1:-77185761 | MS.gene38011:CDS |
| TGCAGGAAATGGGATCTGTC+TGG | 0.512144 | 5.1:-77184996 | MS.gene38011:CDS |
| CTAAGAGCAATTAAAAGTGA+TGG | 0.512478 | 5.1:-77186950 | MS.gene38011:CDS |
| CCTAGTTGACTTGGACAAGC+TGG | 0.515093 | 5.1:-77187044 | MS.gene38011:CDS |
| AGAACATTAATGAAGCTGCT+TGG | 0.516759 | 5.1:-77185391 | MS.gene38011:CDS |
| CACATGCAATTGCTTGCATA+TGG | 0.520343 | 5.1:-77184962 | MS.gene38011:CDS |
| CTGAAAGAGTTAGTGAGGAT+GGG | 0.523225 | 5.1:-77186751 | MS.gene38011:CDS |
| ACTATGTGGCTCATTGGTAC+AGG | 0.523538 | 5.1:-77184917 | MS.gene38011:intron |
| GAATTGTTGAGGAGCAATCC+TGG | 0.524805 | 5.1:-77186011 | MS.gene38011:CDS |
| TGAAGTTAACCTAGTTGACT+TGG | 0.525302 | 5.1:-77187053 | MS.gene38011:CDS |
| ACAGTGTTCAAGCAAGTTGA+TGG | 0.525361 | 5.1:+77184194 | None:intergenic |
| ACATATGGTGGCAAGATTGG+TGG | 0.525632 | 5.1:+77184729 | None:intergenic |
| AATTAAAAGTGATGGGGATG+TGG | 0.526123 | 5.1:-77186942 | MS.gene38011:CDS |
| ATTGTAAAGCCACAAATAGT+GGG | 0.527098 | 5.1:-77184047 | MS.gene38011:CDS |
| GTGACAGTGTTGCTTGCAGA+TGG | 0.530301 | 5.1:+77184140 | None:intergenic |
| TGCAGGTGATGCTTCTGTTG+TGG | 0.530745 | 5.1:+77184283 | None:intergenic |
| CAAGCAATTGCATGTGGACA+AGG | 0.531261 | 5.1:+77184969 | None:intergenic |
| ACATCCAGGTGAGCAATTGA+AGG | 0.532118 | 5.1:-77185480 | MS.gene38011:CDS |
| TTTCATTTCAGACCAGCAAA+AGG | 0.532385 | 5.1:-77185685 | MS.gene38011:intron |
| GGTGACAGGATGCTTGCACC+AGG | 0.532698 | 5.1:-77184525 | MS.gene38011:CDS |
| GACCATTAATTGGTCTAGAT+GGG | 0.533441 | 5.1:-77185884 | MS.gene38011:CDS |
| ACTATGATGAGGGCTTTGAC+TGG | 0.534289 | 5.1:-77186709 | MS.gene38011:CDS |
| AGGATAAGGTTTAGATACAA+TGG | 0.537914 | 5.1:-77187151 | MS.gene38011:CDS |
| ATGTTAGAAGGGCACCAGGC+AGG | 0.538427 | 5.1:-77184710 | MS.gene38011:CDS |
| TCATGGTGCCTAAGAAGTGC+AGG | 0.538945 | 5.1:-77184013 | MS.gene38011:CDS |
| AGTTGATGGTGGTCCAGTAT+TGG | 0.539239 | 5.1:+77184208 | None:intergenic |
| ATTGTTGGATAGGTGTAAGA+AGG | 0.539259 | 5.1:-77185129 | MS.gene38011:CDS |
| AAACATTCTCAATCTAGTGC+TGG | 0.540603 | 5.1:-77184648 | MS.gene38011:CDS |
| AGTAGTGGAAGCTGAAACAA+AGG | 0.541391 | 5.1:-77185775 | MS.gene38011:CDS |
| GTAAGAAGGAAGCTGAGGGC+TGG | 0.541575 | 5.1:-77185115 | MS.gene38011:CDS |
| CCATATGTTAGAAGGGCACC+AGG | 0.541887 | 5.1:-77184714 | MS.gene38011:CDS |
| CATAATGCTAGGACATGCTA+TGG | 0.543257 | 5.1:-77184558 | MS.gene38011:CDS |
| GGTTGAATTTAACAAGGCAA+TGG | 0.543685 | 5.1:-77185423 | MS.gene38011:CDS |
| CCTAAGAAGTGCAGGAACAT+TGG | 0.544024 | 5.1:-77184005 | MS.gene38011:CDS |
| AGCTGAAACAAAGGACGCAT+GGG | 0.546447 | 5.1:-77185766 | MS.gene38011:CDS |
| AGGTTGTTGAACAGTTGGAT+TGG | 0.546562 | 5.1:+77184409 | None:intergenic |
| AACTTTAAGAAGAGACATCC+AGG | 0.546993 | 5.1:-77185494 | MS.gene38011:CDS |
| TGAAGGAGGCTTGTAAAGAA+AGG | 0.547771 | 5.1:-77186145 | MS.gene38011:CDS |
| GATTCAGCTGCTACAAACTC+AGG | 0.550418 | 5.1:+77186782 | None:intergenic |
| ATCATAAGTGTCATTATGGT+GGG | 0.551137 | 5.1:-77186253 | MS.gene38011:CDS |
| TGTGGAAGATGTGGTGAGCT+TGG | 0.554813 | 5.1:-77184582 | MS.gene38011:CDS |
| TGAATCTTCACACTGCTACC+AGG | 0.559896 | 5.1:+77185993 | None:intergenic |
| CGAGGTGTGAGTTTCAGGAT+TGG | 0.562225 | 5.1:+77186185 | None:intergenic |
| TGATGCAAGATATGAGGATG+AGG | 0.563105 | 5.1:-77186846 | MS.gene38011:CDS |
| ACATGCTATGGTAAACAACT+TGG | 0.566425 | 5.1:-77184546 | MS.gene38011:CDS |
| GTGTGGTATGCTGTGGCTGG+AGG | 0.566649 | 5.1:-77186989 | MS.gene38011:CDS |
| TGAAAGAGTTAGTGAGGATG+GGG | 0.568618 | 5.1:-77186750 | MS.gene38011:CDS |
| GAGAGAGTTAGGTGTAAAGG+GGG | 0.570626 | 5.1:-77187020 | MS.gene38011:CDS |
| ATGGTAAACAACTTGGTGAC+AGG | 0.571572 | 5.1:-77184539 | MS.gene38011:CDS |
| CATAGCTGAGTATAAGGCTG+AGG | 0.572723 | 5.1:-77186912 | MS.gene38011:CDS |
| TGATCTTGATGCAAGATATG+AGG | 0.575843 | 5.1:-77186852 | MS.gene38011:CDS |
| GCTGGAGGAGAACTCAAAGA+TGG | 0.577876 | 5.1:-77186974 | MS.gene38011:CDS |
| TGAACATTTGAAGTAACCAC+AGG | 0.580157 | 5.1:+77186650 | None:intergenic |
| GTTGTGGCTAAGTGTGCTGA+TGG | 0.582427 | 5.1:-77186347 | MS.gene38011:CDS |
| CCAGTATTGGTTGCAACAGG+TGG | 0.585794 | 5.1:+77184221 | None:intergenic |
| TAAGAAAAGTGATAGGAAGA+GGG | 0.586873 | 5.1:-77186369 | MS.gene38011:CDS |
| TGACAGGATGCTTGCACCAG+GGG | 0.590664 | 5.1:-77184523 | MS.gene38011:CDS |
| AAGCTGAAACAAAGGACGCA+TGG | 0.594726 | 5.1:-77185767 | MS.gene38011:CDS |
| AGGCAATGTGGAAAGCTGCT+AGG | 0.595180 | 5.1:-77185457 | MS.gene38011:CDS |
| CTTGCCACCATATGTTAGAA+GGG | 0.595352 | 5.1:-77184721 | MS.gene38011:CDS |
| GTGAGCATGCTGTAGGTAGT+TGG | 0.595512 | 5.1:-77185358 | MS.gene38011:CDS |
| GTGACAGGATGCTTGCACCA+GGG | 0.596778 | 5.1:-77184524 | MS.gene38011:CDS |
| GGCTGGTCTCCAAATTGGAG+TGG | 0.599060 | 5.1:-77185098 | MS.gene38011:CDS |
| GGCACATTGTTGCTTGCAAG+TGG | 0.604283 | 5.1:+77184161 | None:intergenic |
| GAGGATAAAGAAATTGAAGG+AGG | 0.607215 | 5.1:-77186159 | MS.gene38011:CDS |
| GGAGGCTTGTAAAGAAAGGT+GGG | 0.609114 | 5.1:-77186141 | MS.gene38011:CDS |
| TTCGGAGAAGATGAAGTGGG+TGG | 0.609860 | 5.1:-77187732 | None:intergenic |
| GAGATGAGTGAGCATGCTGT+AGG | 0.611164 | 5.1:-77185365 | MS.gene38011:CDS |
| AAGTCTCTGGAACTTATCCA+TGG | 0.615263 | 5.1:-77186077 | MS.gene38011:CDS |
| AGGAGGCTTGTAAAGAAAGG+TGG | 0.615604 | 5.1:-77186142 | MS.gene38011:CDS |
| CTATACTGTGTGGTATGCTG+TGG | 0.617571 | 5.1:-77186996 | MS.gene38011:CDS |
| TCCACTTTCAGATTCAAAAG+GGG | 0.623534 | 5.1:+77186811 | None:intergenic |
| TAGCATCTGCTCTTCTGATG+AGG | 0.624700 | 5.1:-77186537 | MS.gene38011:CDS |
| CCTAACTTTGAATACAAAAG+GGG | 0.626197 | 5.1:-77187112 | MS.gene38011:CDS |
| GGTGCCCTTCTAACATATGG+TGG | 0.626501 | 5.1:+77184717 | None:intergenic |
| AGTGTAAAGATAGTGATGCT+GGG | 0.628640 | 5.1:-77185971 | MS.gene38011:CDS |
| GATCATAAGTGTCATTATGG+TGG | 0.629188 | 5.1:-77186254 | MS.gene38011:CDS |
| GTGAGCTTGGTCATAATGCT+AGG | 0.629928 | 5.1:-77184569 | MS.gene38011:CDS |
| AATCAACACAGTCTCAAGTG+TGG | 0.632912 | 5.1:-77184600 | MS.gene38011:CDS |
| AGTGATAAATCCTGAACCTG+TGG | 0.633340 | 5.1:-77186666 | MS.gene38011:CDS |
| ATACAATGGTTACTTTAGTG+GGG | 0.636397 | 5.1:-77187137 | MS.gene38011:CDS |
| TAGGTGTAAGAAGGAAGCTG+AGG | 0.637007 | 5.1:-77185120 | MS.gene38011:CDS |
| TACAATGGTTGAATTTAACA+AGG | 0.637028 | 5.1:-77185429 | MS.gene38011:CDS |
| TTGTAAAGCCACAAATAGTG+GGG | 0.641904 | 5.1:-77184046 | MS.gene38011:CDS |
| CTTGTTGTGGATGCAGCAGT+TGG | 0.643048 | 5.1:+77184248 | None:intergenic |
| TTTCTGAAAGGAAGAGATGG+AGG | 0.643266 | 5.1:-77185858 | MS.gene38011:CDS |
| AGCTGCTAGGTGTACTACAA+TGG | 0.644005 | 5.1:-77185444 | MS.gene38011:CDS |
| AACAGGTGGAACACTTGTTG+TGG | 0.644252 | 5.1:+77184235 | None:intergenic |
| AGTCTCAAGTGTGGAAGATG+TGG | 0.644758 | 5.1:-77184591 | MS.gene38011:CDS |
| AATGACAGTGACTATGATGA+GGG | 0.646991 | 5.1:-77186719 | MS.gene38011:CDS |
| GAATGACAGTGACTATGATG+AGG | 0.652354 | 5.1:-77186720 | MS.gene38011:CDS |
| AAGAGCAATTAAAAGTGATG+GGG | 0.654014 | 5.1:-77186948 | MS.gene38011:CDS |
| GTGTTCAAGCAAGTTGATGG+TGG | 0.654916 | 5.1:+77184197 | None:intergenic |
| TGAGAGAGTTAGGTGTAAAG+GGG | 0.656966 | 5.1:-77187021 | MS.gene38011:CDS |
| TCCAGGTGAGCAATTGAAGG+AGG | 0.660416 | 5.1:-77185477 | MS.gene38011:CDS |
| TGTAAAGCCACAAATAGTGG+GGG | 0.662075 | 5.1:-77184045 | MS.gene38011:CDS |
| CATATGCAAGCAATTGCATG+TGG | 0.664766 | 5.1:+77184963 | None:intergenic |
| TGTGTGTTAAACATCTGTAT+GGG | 0.668791 | 5.1:-77185517 | MS.gene38011:CDS |
| AGGTGTAAGAAGGAAGCTGA+GGG | 0.668965 | 5.1:-77185119 | MS.gene38011:CDS |
| CTTATGAGTATGGAGGCACG+TGG | 0.673041 | 5.1:-77187084 | MS.gene38011:CDS |
| GGCTTGAATCAAATGGACCA+TGG | 0.674947 | 5.1:-77187704 | MS.gene38011:CDS |
| AATTTCTTTATCCTCATACG+AGG | 0.678356 | 5.1:+77186167 | None:intergenic |
| ATTGCTCATCTATGGCACCA+TGG | 0.678376 | 5.1:+77186060 | None:intergenic |
| AGCAATTGAAGGAGGCAATG+TGG | 0.678725 | 5.1:-77185469 | MS.gene38011:CDS |
| ATGGTGGCAAGATTGGTGGA+AGG | 0.679947 | 5.1:+77184733 | None:intergenic |
| ACAAGTAAACAACATGTGTG+AGG | 0.682325 | 5.1:-77185297 | MS.gene38011:CDS |
| GGTGATACTTATGAGTATGG+AGG | 0.687282 | 5.1:-77187091 | MS.gene38011:CDS |
| ATTGGTGGAAGGTCAAGTTG+TGG | 0.698009 | 5.1:+77184744 | None:intergenic |
| ACTATGCTGAGGAATTGTTG+AGG | 0.698262 | 5.1:-77186022 | MS.gene38011:CDS |
| TGAGTCTGAAAGAGTTAGTG+AGG | 0.699782 | 5.1:-77186756 | MS.gene38011:CDS |
| GCATCTGAGAAACTATGCTG+AGG | 0.703280 | 5.1:-77186033 | MS.gene38011:CDS |
| CTACTAAGAACCACTCAGTG+AGG | 0.703377 | 5.1:-77187171 | MS.gene38011:CDS |
| GACGAGCAGAGCTTTCACCA+TGG | 0.711365 | 5.1:+77187687 | None:intergenic |
| TAAACCTTATCCTCACTGAG+TGG | 0.713054 | 5.1:+77187161 | None:intergenic |
| TCTGATGAGGATACTGACCG+TGG | 0.724939 | 5.1:-77186524 | MS.gene38011:CDS |
| TTATGAGTATGGAGGCACGT+GGG | 0.759191 | 5.1:-77187083 | MS.gene38011:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAACTTGAAATTATAT+AGG | - | chr5.1:77186833-77186852 | MS.gene38011:CDS | 10.0% |
| !!! | ATATTGTTTTATTTATTTGA+AGG | - | chr5.1:77186075-77186094 | MS.gene38011:CDS | 10.0% |
| !!! | TATTGTTTTATTTATTTGAA+GGG | - | chr5.1:77186076-77186095 | MS.gene38011:CDS | 10.0% |
| !!! | AAGTATGTTGTTTAAATTTA+GGG | - | chr5.1:77184225-77184244 | MS.gene38011:CDS | 15.0% |
| !!! | ACAATAATAATGTCATTTAA+GGG | - | chr5.1:77184432-77184451 | MS.gene38011:intron | 15.0% |
| !!! | TACAATAATAATGTCATTTA+AGG | - | chr5.1:77184431-77184450 | MS.gene38011:intron | 15.0% |
| !! | ATTATATAACACATTAGCAA+AGG | - | chr5.1:77186804-77186823 | MS.gene38011:CDS | 20.0% |
| !! | TGCATATAATATTGTAACTT+GGG | - | chr5.1:77184177-77184196 | MS.gene38011:CDS | 20.0% |
| !! | TTATATAACACATTAGCAAA+GGG | - | chr5.1:77186805-77186824 | MS.gene38011:CDS | 20.0% |
| !! | TTTATGTTAAGAAAAGTGAT+AGG | - | chr5.1:77185287-77185306 | MS.gene38011:CDS | 20.0% |
| !!! | ATATAGGAAATCTACTTTTT+TGG | - | chr5.1:77186849-77186868 | MS.gene38011:CDS | 20.0% |
| !!! | CAATAATAATGTCATTTAAG+GGG | - | chr5.1:77184433-77184452 | MS.gene38011:intron | 20.0% |
| !!! | GAAGTATGTTGTTTAAATTT+AGG | - | chr5.1:77184224-77184243 | MS.gene38011:CDS | 20.0% |
| !!! | GTTAAAACAAAGTATGTTTT+AGG | + | chr5.1:77185376-77185395 | None:intergenic | 20.0% |
| ! | AAAAACACACATATATTCTC+TGG | + | chr5.1:77185726-77185745 | None:intergenic | 25.0% |
| ! | AACTTAGAGACTATATGTTA+AGG | - | chr5.1:77186479-77186498 | MS.gene38011:CDS | 25.0% |
| ! | AAGTAGCTATCAGTTATATA+GGG | - | chr5.1:77185555-77185574 | MS.gene38011:CDS | 25.0% |
| ! | ATCCTAACTTTGAATACAAA+AGG | - | chr5.1:77184549-77184568 | MS.gene38011:CDS | 25.0% |
| ! | CCTAAAAAACAAAGGAAAAA+AGG | - | chr5.1:77186976-77186995 | MS.gene38011:CDS | 25.0% |
| ! | CTGCATATAATATTGTAACT+TGG | - | chr5.1:77184176-77184195 | MS.gene38011:CDS | 25.0% |
| ! | GCTAGATTTACAGTTTATAA+AGG | - | chr5.1:77186601-77186620 | MS.gene38011:CDS | 25.0% |
| ! | TAAGAGCAATTAAAAGTGAT+GGG | - | chr5.1:77184714-77184733 | MS.gene38011:CDS | 25.0% |
| ! | TAAGTAGCTATCAGTTATAT+AGG | - | chr5.1:77185554-77185573 | MS.gene38011:CDS | 25.0% |
| ! | TACAATGGTTGAATTTAACA+AGG | - | chr5.1:77186234-77186253 | MS.gene38011:CDS | 25.0% |
| ! | TATGAGGATAAAGAAATTGA+AGG | - | chr5.1:77185501-77185520 | MS.gene38011:CDS | 25.0% |
| ! | TCCAATGATTAACAAATTGT+TGG | - | chr5.1:77186519-77186538 | MS.gene38011:CDS | 25.0% |
| ! | TCCTAACTTTGAATACAAAA+GGG | - | chr5.1:77184550-77184569 | MS.gene38011:CDS | 25.0% |
| ! | TGAAAATGTATATCACAGAT+AGG | - | chr5.1:77186449-77186468 | MS.gene38011:CDS | 25.0% |
| ! | TGATTAACAAATTGTTGGAT+AGG | - | chr5.1:77186524-77186543 | MS.gene38011:CDS | 25.0% |
| ! | TTTGTCTTTGCTTGAATATT+GGG | - | chr5.1:77184048-77184067 | MS.gene38011:CDS | 25.0% |
| !! | TATGTAATTTTGTCTTACCA+CGG | + | chr5.1:77185159-77185178 | None:intergenic | 25.0% |
| !! | TTTTGTCTTTGCTTGAATAT+TGG | - | chr5.1:77184047-77184066 | MS.gene38011:CDS | 25.0% |
| !!! | AAAACAAAGTATGTTTTAGG+TGG | + | chr5.1:77185373-77185392 | None:intergenic | 25.0% |
| !!! | AAGAAATTGTTTTTGTGAAG+GGG | - | chr5.1:77185194-77185213 | MS.gene38011:CDS | 25.0% |
| !!! | CCTTTTTTCCTTTGTTTTTT+AGG | + | chr5.1:77186979-77186998 | None:intergenic | 25.0% |
| !!! | GAAGAAATTGTTTTTGTGAA+GGG | - | chr5.1:77185193-77185212 | MS.gene38011:CDS | 25.0% |
| !!! | TCCAACAATTTGTTAATCAT+TGG | + | chr5.1:77186523-77186542 | None:intergenic | 25.0% |
| !!! | TGAAGAAATTGTTTTTGTGA+AGG | - | chr5.1:77185192-77185211 | MS.gene38011:CDS | 25.0% |
| !!! | TGTTGTTATACTACTGATTT+TGG | - | chr5.1:77184386-77184405 | MS.gene38011:CDS | 25.0% |
| !!! | TTATACTACTGATTTTGGTA+TGG | - | chr5.1:77184391-77184410 | MS.gene38011:CDS | 25.0% |
| AAGAGCAATTAAAAGTGATG+GGG | - | chr5.1:77184715-77184734 | MS.gene38011:CDS | 30.0% | |
| AATCTTGGAGAAAAATCTTG+TGG | - | chr5.1:77186643-77186662 | MS.gene38011:CDS | 30.0% | |
| AATTGTAAAGCCACAAATAG+TGG | - | chr5.1:77187615-77187634 | MS.gene38011:intron | 30.0% | |
| AATTTCTTTATCCTCATACG+AGG | + | chr5.1:77185499-77185518 | None:intergenic | 30.0% | |
| ACTACTTGTAGACCATTAAT+TGG | - | chr5.1:77185769-77185788 | MS.gene38011:CDS | 30.0% | |
| AGGATAAGGTTTAGATACAA+TGG | - | chr5.1:77184512-77184531 | MS.gene38011:intron | 30.0% | |
| ATTGTAAAGCCACAAATAGT+GGG | - | chr5.1:77187616-77187635 | MS.gene38011:intron | 30.0% | |
| CAAAAACGAATCTTACTTTG+AGG | + | chr5.1:77184032-77184051 | None:intergenic | 30.0% | |
| CCTAACTTTGAATACAAAAG+GGG | - | chr5.1:77184551-77184570 | MS.gene38011:CDS | 30.0% | |
| CTAAGAGCAATTAAAAGTGA+TGG | - | chr5.1:77184713-77184732 | MS.gene38011:CDS | 30.0% | |
| CTGTTATATCTCTTGTTGAT+GGG | - | chr5.1:77186425-77186444 | MS.gene38011:CDS | 30.0% | |
| GAAAAAAGGTAATGATGAGA+AGG | - | chr5.1:77186990-77187009 | MS.gene38011:CDS | 30.0% | |
| GACTATATGTTAAGGTATGA+TGG | - | chr5.1:77186487-77186506 | MS.gene38011:CDS | 30.0% | |
| TAAGAAAAGTGATAGGAAGA+GGG | - | chr5.1:77185294-77185313 | MS.gene38011:CDS | 30.0% | |
| TACTTCAAATGTTCAAGCTT+TGG | - | chr5.1:77185021-77185040 | MS.gene38011:CDS | 30.0% | |
| TGCTAAACCTCATGTAAAAT+GGG | + | chr5.1:77185345-77185364 | None:intergenic | 30.0% | |
| TGTGTGTTAAACATCTGTAT+GGG | - | chr5.1:77186146-77186165 | MS.gene38011:CDS | 30.0% | |
| TTAAGAAAAGTGATAGGAAG+AGG | - | chr5.1:77185293-77185312 | MS.gene38011:CDS | 30.0% | |
| TTATTATCTCCACTCCAATT+TGG | + | chr5.1:77186577-77186596 | None:intergenic | 30.0% | |
| TTCACATAACACAACCAAAA+AGG | + | chr5.1:77184207-77184226 | None:intergenic | 30.0% | |
| TTCCACTTTCAGATTCAAAA+GGG | + | chr5.1:77184856-77184875 | None:intergenic | 30.0% | |
| TTGCTAAACCTCATGTAAAA+TGG | + | chr5.1:77185346-77185365 | None:intergenic | 30.0% | |
| TTGTGTGTTAAACATCTGTA+TGG | - | chr5.1:77186145-77186164 | MS.gene38011:CDS | 30.0% | |
| ! | ACATATATTCTCTGGAAAAC+AGG | + | chr5.1:77185718-77185737 | None:intergenic | 30.0% |
| ! | ACTATTTGTGGCTTTACAAT+TGG | + | chr5.1:77187616-77187635 | None:intergenic | 30.0% |
| ! | AGATACAATGGTTACTTTAG+TGG | - | chr5.1:77184524-77184543 | MS.gene38011:CDS | 30.0% |
| ! | ATACAATGGTTACTTTAGTG+GGG | - | chr5.1:77184526-77184545 | MS.gene38011:CDS | 30.0% |
| ! | ATCATAAGTGTCATTATGGT+GGG | - | chr5.1:77185410-77185429 | MS.gene38011:CDS | 30.0% |
| ! | ATTTTACATGAGGTTTAGCA+AGG | - | chr5.1:77185345-77185364 | MS.gene38011:CDS | 30.0% |
| ! | CTGGTTTCTTGAACTTTTAT+TGG | - | chr5.1:77185921-77185940 | MS.gene38011:CDS | 30.0% |
| ! | GATACAATGGTTACTTTAGT+GGG | - | chr5.1:77184525-77184544 | MS.gene38011:CDS | 30.0% |
| !! | CATAATTTTGGTCCATTACA+AGG | + | chr5.1:77186898-77186917 | None:intergenic | 30.0% |
| !! | CTTGTAATGGACCAAAATTA+TGG | - | chr5.1:77186896-77186915 | MS.gene38011:CDS | 30.0% |
| !!! | AGACTGTGTTGATTTCTTTT+GGG | + | chr5.1:77187057-77187076 | None:intergenic | 30.0% |
| !!! | GAAGATTTTGATGATGAGAA+TGG | - | chr5.1:77185085-77185104 | MS.gene38011:CDS | 30.0% |
| !!! | GAATATTGGGTTGTCTTTTT+TGG | - | chr5.1:77184061-77184080 | MS.gene38011:CDS | 30.0% |
| AAACATTCTCAATCTAGTGC+TGG | - | chr5.1:77187015-77187034 | MS.gene38011:CDS | 35.0% | |
| AAGGTTCATAGCTGAGTATA+AGG | - | chr5.1:77184745-77184764 | MS.gene38011:CDS | 35.0% | |
| AATGACAGTGACTATGATGA+GGG | - | chr5.1:77184944-77184963 | MS.gene38011:CDS | 35.0% | |
| ACAAGTAAACAACATGTGTG+AGG | - | chr5.1:77186366-77186385 | MS.gene38011:CDS | 35.0% | |
| ACATGCTATGGTAAACAACT+TGG | - | chr5.1:77187117-77187136 | MS.gene38011:CDS | 35.0% | |
| AGAACATTAATGAAGCTGCT+TGG | - | chr5.1:77186272-77186291 | MS.gene38011:CDS | 35.0% | |
| AGTGTAAAGATAGTGATGCT+GGG | - | chr5.1:77185692-77185711 | MS.gene38011:CDS | 35.0% | |
| ATGGCATTGCAGCTAAAAAA+TGG | - | chr5.1:77185953-77185972 | MS.gene38011:CDS | 35.0% | |
| ATTGTTGGATAGGTGTAAGA+AGG | - | chr5.1:77186534-77186553 | MS.gene38011:CDS | 35.0% | |
| GAAAAATCCAGATGACTATG+TGG | - | chr5.1:77186732-77186751 | MS.gene38011:CDS | 35.0% | |
| GAAGAGAAAGTCTGATGAAA+TGG | - | chr5.1:77187684-77187703 | MS.gene38011:CDS | 35.0% | |
| GAATCTTGCTTTGTACTTTG+AGG | + | chr5.1:77184100-77184119 | None:intergenic | 35.0% | |
| GACATTTACTAGCAGCAATT+GGG | - | chr5.1:77185827-77185846 | MS.gene38011:CDS | 35.0% | |
| GACTCATATGCTGTTAATCT+TGG | - | chr5.1:77186628-77186647 | MS.gene38011:CDS | 35.0% | |
| GAGGATAAAGAAATTGAAGG+AGG | - | chr5.1:77185504-77185523 | MS.gene38011:CDS | 35.0% | |
| GCTGTTATATCTCTTGTTGA+TGG | - | chr5.1:77186424-77186443 | MS.gene38011:CDS | 35.0% | |
| GGATAAAGGCTTGAATCAAA+TGG | - | chr5.1:77183952-77183971 | MS.gene38011:CDS | 35.0% | |
| GGTTGAATTTAACAAGGCAA+TGG | - | chr5.1:77186240-77186259 | MS.gene38011:CDS | 35.0% | |
| GTTCCACTTTCAGATTCAAA+AGG | + | chr5.1:77184857-77184876 | None:intergenic | 35.0% | |
| TCAGGATTTATCACTTGATC+AGG | + | chr5.1:77184992-77185011 | None:intergenic | 35.0% | |
| TCCACTTTCAGATTCAAAAG+GGG | + | chr5.1:77184855-77184874 | None:intergenic | 35.0% | |
| TCTTCAAGTCTTGATGCATT+AGG | + | chr5.1:77185070-77185089 | None:intergenic | 35.0% | |
| TGAAGTTAACCTAGTTGACT+TGG | - | chr5.1:77184610-77184629 | MS.gene38011:CDS | 35.0% | |
| TGATCTTGATGCAAGATATG+AGG | - | chr5.1:77184811-77184830 | MS.gene38011:CDS | 35.0% | |
| TTCAGATTCAAAAGGGGAAT+AGG | + | chr5.1:77184849-77184868 | None:intergenic | 35.0% | |
| TTGTAAAGCCACAAATAGTG+GGG | - | chr5.1:77187617-77187636 | MS.gene38011:intron | 35.0% | |
| TTTCATTTCAGACCAGCAAA+AGG | - | chr5.1:77185978-77185997 | MS.gene38011:CDS | 35.0% | |
| ! | AACAAATGCATACCTTTTGC+TGG | + | chr5.1:77185993-77186012 | None:intergenic | 35.0% |
| ! | AACTTTAAGAAGAGACATCC+AGG | - | chr5.1:77186169-77186188 | MS.gene38011:CDS | 35.0% |
| ! | AATTAAAAGTGATGGGGATG+TGG | - | chr5.1:77184721-77184740 | MS.gene38011:CDS | 35.0% |
| ! | AGACCATTAATTGGTCTAGA+TGG | - | chr5.1:77185778-77185797 | MS.gene38011:CDS | 35.0% |
| ! | CCCCTTTTGTATTCAAAGTT+AGG | + | chr5.1:77184554-77184573 | None:intergenic | 35.0% |
| ! | GACCATTAATTGGTCTAGAT+GGG | - | chr5.1:77185779-77185798 | MS.gene38011:CDS | 35.0% |
| ! | GATCATAAGTGTCATTATGG+TGG | - | chr5.1:77185409-77185428 | MS.gene38011:CDS | 35.0% |
| ! | GCTGATCATAAGTGTCATTA+TGG | - | chr5.1:77185406-77185425 | MS.gene38011:CDS | 35.0% |
| ! | GGATAGTGTGACTTTTTACT+TGG | - | chr5.1:77184772-77184791 | MS.gene38011:CDS | 35.0% |
| ! | TGAACATTTGAAGTAACCAC+AGG | + | chr5.1:77185016-77185035 | None:intergenic | 35.0% |
| ! | TTCAAATGTTCAAGCTTTGG+TGG | - | chr5.1:77185024-77185043 | MS.gene38011:CDS | 35.0% |
| !! | GTGTTTTTATGCTTGCAAGA+GGG | - | chr5.1:77185738-77185757 | MS.gene38011:CDS | 35.0% |
| !! | TCAAGTTGTGGCCATAATTT+TGG | + | chr5.1:77186910-77186929 | None:intergenic | 35.0% |
| !! | TCTCAAGTGCTGAACTAATT+AGG | - | chr5.1:77185224-77185243 | MS.gene38011:CDS | 35.0% |
| !! | TGTGTTTTTATGCTTGCAAG+AGG | - | chr5.1:77185737-77185756 | MS.gene38011:CDS | 35.0% |
| !! | TGTTTTCTGAAAGGAAGAGA+TGG | - | chr5.1:77185802-77185821 | MS.gene38011:CDS | 35.0% |
| !!! | ACTACTGATTTTGGTATGGT+TGG | - | chr5.1:77184395-77184414 | MS.gene38011:CDS | 35.0% |
| !!! | CTTTTATTGGCTGACTTGAA+TGG | - | chr5.1:77185934-77185953 | MS.gene38011:CDS | 35.0% |
| !!! | GAGACTGTGTTGATTTCTTT+TGG | + | chr5.1:77187058-77187077 | None:intergenic | 35.0% |
| AACCTCATACTGCCTTGTAA+TGG | - | chr5.1:77186883-77186902 | MS.gene38011:CDS | 40.0% | |
| AATCAACACAGTCTCAAGTG+TGG | - | chr5.1:77187063-77187082 | MS.gene38011:CDS | 40.0% | |
| ACCAATTGCATTTGCAGTAG+TGG | - | chr5.1:77185873-77185892 | MS.gene38011:CDS | 40.0% | |
| ACTATGCTGAGGAATTGTTG+AGG | - | chr5.1:77185641-77185660 | MS.gene38011:intron | 40.0% | |
| ACTGACTGTTGTGTTCCAAT+AGG | + | chr5.1:77187712-77187731 | None:intergenic | 40.0% | |
| AGGGGTGATACTTATGAGTA+TGG | - | chr5.1:77184569-77184588 | MS.gene38011:CDS | 40.0% | |
| AGGTTGTTGAACAGTTGGAT+TGG | + | chr5.1:77187257-77187276 | None:intergenic | 40.0% | |
| AGTGATAAATCCTGAACCTG+TGG | - | chr5.1:77184997-77185016 | MS.gene38011:CDS | 40.0% | |
| AGTTGCTCACAGTCTTCTTT+GGG | + | chr5.1:77187558-77187577 | None:intergenic | 40.0% | |
| ATGCGCATATTGCTCATCTA+TGG | + | chr5.1:77185614-77185633 | None:intergenic | 40.0% | |
| CACATGCAATTGCTTGCATA+TGG | - | chr5.1:77186701-77186720 | MS.gene38011:CDS | 40.0% | |
| CACCCATCTAGACCAATTAA+TGG | + | chr5.1:77185784-77185803 | None:intergenic | 40.0% | |
| CAGTGTAAAGATAGTGATGC+TGG | - | chr5.1:77185691-77185710 | MS.gene38011:CDS | 40.0% | |
| CATAATGCTAGGACATGCTA+TGG | - | chr5.1:77187105-77187124 | MS.gene38011:CDS | 40.0% | |
| CATATGCAAGCAATTGCATG+TGG | + | chr5.1:77186703-77186722 | None:intergenic | 40.0% | |
| CATTAATGAAGCTGCTTGGA+AGG | - | chr5.1:77186276-77186295 | MS.gene38011:CDS | 40.0% | |
| CTAACATATGGTGGCAAGAT+TGG | + | chr5.1:77186940-77186959 | None:intergenic | 40.0% | |
| CTGAAAGAGTTAGTGAGGAT+GGG | - | chr5.1:77184912-77184931 | MS.gene38011:intron | 40.0% | |
| CTTGCCACCATATGTTAGAA+GGG | - | chr5.1:77186942-77186961 | MS.gene38011:CDS | 40.0% | |
| GAATGACAGTGACTATGATG+AGG | - | chr5.1:77184943-77184962 | MS.gene38011:CDS | 40.0% | |
| GGACATTTACTAGCAGCAAT+TGG | - | chr5.1:77185826-77185845 | MS.gene38011:CDS | 40.0% | |
| GGTGATACTTATGAGTATGG+AGG | - | chr5.1:77184572-77184591 | MS.gene38011:CDS | 40.0% | |
| GTGAGAGAGTTAGGTGTAAA+GGG | - | chr5.1:77184641-77184660 | MS.gene38011:CDS | 40.0% | |
| TAAACCTTATCCTCACTGAG+TGG | + | chr5.1:77184505-77184524 | None:intergenic | 40.0% | |
| TCCACTACTGCAAATGCAAT+TGG | + | chr5.1:77185877-77185896 | None:intergenic | 40.0% | |
| TCTGAAAGAGTTAGTGAGGA+TGG | - | chr5.1:77184911-77184930 | MS.gene38011:intron | 40.0% | |
| TCTGATGAAATGGAGCCTAT+TGG | - | chr5.1:77187694-77187713 | MS.gene38011:CDS | 40.0% | |
| TCTTGCCACCATATGTTAGA+AGG | - | chr5.1:77186941-77186960 | MS.gene38011:CDS | 40.0% | |
| TGAAAGAGTTAGTGAGGATG+GGG | - | chr5.1:77184913-77184932 | MS.gene38011:intron | 40.0% | |
| TGAAGGAGGCTTGTAAAGAA+AGG | - | chr5.1:77185518-77185537 | MS.gene38011:CDS | 40.0% | |
| TGAGAGAGTTAGGTGTAAAG+GGG | - | chr5.1:77184642-77184661 | MS.gene38011:CDS | 40.0% | |
| TGAGTCTGAAAGAGTTAGTG+AGG | - | chr5.1:77184907-77184926 | MS.gene38011:intron | 40.0% | |
| TGATGCAAGATATGAGGATG+AGG | - | chr5.1:77184817-77184836 | MS.gene38011:intron | 40.0% | |
| TGTAAAGCCACAAATAGTGG+GGG | - | chr5.1:77187618-77187637 | MS.gene38011:intron | 40.0% | |
| ! | ACACAGTATTTCTACAGCAC+AGG | + | chr5.1:77184297-77184316 | None:intergenic | 40.0% |
| ! | ACAGTGTTCAAGCAAGTTGA+TGG | + | chr5.1:77187472-77187491 | None:intergenic | 40.0% |
| ! | AGTAGTGGAAGCTGAAACAA+AGG | - | chr5.1:77185888-77185907 | MS.gene38011:CDS | 40.0% |
| ! | AGTCTTCTTTGGGTCAGTTT+TGG | + | chr5.1:77187548-77187567 | None:intergenic | 40.0% |
| ! | ATGGTAAACAACTTGGTGAC+AGG | - | chr5.1:77187124-77187143 | MS.gene38011:CDS | 40.0% |
| ! | ATGGTTGCCCATTTTACATG+AGG | - | chr5.1:77185335-77185354 | MS.gene38011:CDS | 40.0% |
| ! | ATGTTTTCCCCCACTATTTG+TGG | + | chr5.1:77187628-77187647 | None:intergenic | 40.0% |
| ! | CTAGATGGGTGTTTTCTGAA+AGG | - | chr5.1:77185793-77185812 | MS.gene38011:CDS | 40.0% |
| ! | TCCCCTTTTGAATCTGAAAG+TGG | - | chr5.1:77184851-77184870 | MS.gene38011:intron | 40.0% |
| ! | TTTCTGAAAGGAAGAGATGG+AGG | - | chr5.1:77185805-77185824 | MS.gene38011:CDS | 40.0% |
| ! | TTTGAAGTAACCACAGGTTC+AGG | + | chr5.1:77185010-77185029 | None:intergenic | 40.0% |
| !! | AAGTCTCTGGAACTTATCCA+TGG | - | chr5.1:77185586-77185605 | MS.gene38011:intron | 40.0% |
| !! | GAAGAAAGCACCAAGCAAAA+AGG | - | chr5.1:77187315-77187334 | MS.gene38011:intron | 40.0% |
| !! | TACTTTGAGGCATTGTTGTC+AGG | + | chr5.1:77184019-77184038 | None:intergenic | 40.0% |
| AAGCTGAAACAAAGGACGCA+TGG | - | chr5.1:77185896-77185915 | MS.gene38011:CDS | 45.0% | |
| AAGTGATAGGAAGAGGGTTG+TGG | - | chr5.1:77185300-77185319 | MS.gene38011:CDS | 45.0% | |
| AATCTGTGCTCATGAGCATC+AGG | + | chr5.1:77186127-77186146 | None:intergenic | 45.0% | |
| AATCTTGTGGCTGCAGGAAA+TGG | - | chr5.1:77186656-77186675 | MS.gene38011:CDS | 45.0% | |
| ACATATGGTGGCAAGATTGG+TGG | + | chr5.1:77186937-77186956 | None:intergenic | 45.0% | |
| ACATCCAGGTGAGCAATTGA+AGG | - | chr5.1:77186183-77186202 | MS.gene38011:CDS | 45.0% | |
| ACTATGTGGCTCATTGGTAC+AGG | - | chr5.1:77186746-77186765 | MS.gene38011:CDS | 45.0% | |
| AGAACCACTCAGTGAGGATA+AGG | - | chr5.1:77184498-77184517 | MS.gene38011:intron | 45.0% | |
| AGCAATTGAAGGAGGCAATG+TGG | - | chr5.1:77186194-77186213 | MS.gene38011:CDS | 45.0% | |
| AGCTGAAACAAAGGACGCAT+GGG | - | chr5.1:77185897-77185916 | MS.gene38011:CDS | 45.0% | |
| AGCTGCTAGGTGTACTACAA+TGG | - | chr5.1:77186219-77186238 | MS.gene38011:CDS | 45.0% | |
| AGGAGGCTTGTAAAGAAAGG+TGG | - | chr5.1:77185521-77185540 | MS.gene38011:CDS | 45.0% | |
| AGGTGTAAGAAGGAAGCTGA+GGG | - | chr5.1:77186544-77186563 | MS.gene38011:CDS | 45.0% | |
| AGTCTCAAGTGTGGAAGATG+TGG | - | chr5.1:77187072-77187091 | MS.gene38011:CDS | 45.0% | |
| AGTGGGGGAAAACATACTCA+TGG | - | chr5.1:77187633-77187652 | MS.gene38011:intron | 45.0% | |
| ATCTTGTGGCTGCAGGAAAT+GGG | - | chr5.1:77186657-77186676 | MS.gene38011:CDS | 45.0% | |
| ATTGCTCATCTATGGCACCA+TGG | + | chr5.1:77185606-77185625 | None:intergenic | 45.0% | |
| CAAGCAATTGCATGTGGACA+AGG | + | chr5.1:77186697-77186716 | None:intergenic | 45.0% | |
| CAATGAGCCACATAGTCATC+TGG | + | chr5.1:77186742-77186761 | None:intergenic | 45.0% | |
| CAGATGACTATGTGGCTCAT+TGG | - | chr5.1:77186740-77186759 | MS.gene38011:CDS | 45.0% | |
| CAGGCAGGCCTAAAAAACAA+AGG | - | chr5.1:77186968-77186987 | MS.gene38011:CDS | 45.0% | |
| CATAGCTGAGTATAAGGCTG+AGG | - | chr5.1:77184751-77184770 | MS.gene38011:CDS | 45.0% | |
| CCAATGTTCCTGCACTTCTT+AGG | + | chr5.1:77187661-77187680 | None:intergenic | 45.0% | |
| CTACTAAGAACCACTCAGTG+AGG | - | chr5.1:77184492-77184511 | MS.gene38011:intron | 45.0% | |
| CTAGCAGCAATTGGGAAAGA+TGG | - | chr5.1:77185835-77185854 | MS.gene38011:CDS | 45.0% | |
| CTATACTGTGTGGTATGCTG+TGG | - | chr5.1:77184667-77184686 | MS.gene38011:CDS | 45.0% | |
| GAATTGTTGAGGAGCAATCC+TGG | - | chr5.1:77185652-77185671 | MS.gene38011:intron | 45.0% | |
| GAGAAAAATCTTGTGGCTGC+AGG | - | chr5.1:77186650-77186669 | MS.gene38011:CDS | 45.0% | |
| GAGAGAGTTAGGTGTAAAGG+GGG | - | chr5.1:77184643-77184662 | MS.gene38011:CDS | 45.0% | |
| GAGTTGCTCACAGTCTTCTT+TGG | + | chr5.1:77187559-77187578 | None:intergenic | 45.0% | |
| GATGCTTCTGTTGTGGTTGA+AGG | + | chr5.1:77187376-77187395 | None:intergenic | 45.0% | |
| GATTCAGCTGCTACAAACTC+AGG | + | chr5.1:77184884-77184903 | None:intergenic | 45.0% | |
| GCATCTGAGAAACTATGCTG+AGG | - | chr5.1:77185630-77185649 | MS.gene38011:intron | 45.0% | |
| GCTTGAGGTTGTTGAACAGT+TGG | + | chr5.1:77187262-77187281 | None:intergenic | 45.0% | |
| GGAGGCTTGTAAAGAAAGGT+GGG | - | chr5.1:77185522-77185541 | MS.gene38011:CDS | 45.0% | |
| GGCTTGAATCAAATGGACCA+TGG | - | chr5.1:77183959-77183978 | MS.gene38011:CDS | 45.0% | |
| GGTGAGAGAGTTAGGTGTAA+AGG | - | chr5.1:77184640-77184659 | MS.gene38011:CDS | 45.0% | |
| GTCCATTACAAGGCAGTATG+AGG | + | chr5.1:77186888-77186907 | None:intergenic | 45.0% | |
| GTGAGCTTGGTCATAATGCT+AGG | - | chr5.1:77187094-77187113 | MS.gene38011:CDS | 45.0% | |
| TAAAGGGGGACTATACTGTG+TGG | - | chr5.1:77184657-77184676 | MS.gene38011:CDS | 45.0% | |
| TAGCATCTGCTCTTCTGATG+AGG | - | chr5.1:77185126-77185145 | MS.gene38011:CDS | 45.0% | |
| TAGGGCTAAGAAGAAGTCTC+TGG | - | chr5.1:77185573-77185592 | MS.gene38011:intron | 45.0% | |
| TAGGTGTAAGAAGGAAGCTG+AGG | - | chr5.1:77186543-77186562 | MS.gene38011:CDS | 45.0% | |
| TCATACGAGGTGTGAGTTTC+AGG | + | chr5.1:77185486-77185505 | None:intergenic | 45.0% | |
| TGAAACTCACACCTCGTATG+AGG | - | chr5.1:77185485-77185504 | MS.gene38011:CDS | 45.0% | |
| TGAATCTTCACACTGCTACC+AGG | + | chr5.1:77185673-77185692 | None:intergenic | 45.0% | |
| TTAGCTGGCCCTTTCTTCTT+GGG | + | chr5.1:77187295-77187314 | None:intergenic | 45.0% | |
| ! | AAAGCACCAAGCAAAAAGGC+TGG | - | chr5.1:77187319-77187338 | MS.gene38011:intron | 45.0% |
| ! | AAAGTGATGGGGATGTGGTA+AGG | - | chr5.1:77184726-77184745 | MS.gene38011:CDS | 45.0% |
| ! | AACAGGTGGAACACTTGTTG+TGG | + | chr5.1:77187431-77187450 | None:intergenic | 45.0% |
| ! | ACTATGATGAGGGCTTTGAC+TGG | - | chr5.1:77184954-77184973 | MS.gene38011:CDS | 45.0% |
| ! | ATGCTGTAGGTAGTTGGTCT+AGG | - | chr5.1:77186311-77186330 | MS.gene38011:CDS | 45.0% |
| ! | ATTGGTGGAAGGTCAAGTTG+TGG | + | chr5.1:77186922-77186941 | None:intergenic | 45.0% |
| ! | CCTAAGAAGTGCAGGAACAT+TGG | - | chr5.1:77187658-77187677 | MS.gene38011:CDS | 45.0% |
| ! | GTAACTTGGGTCGTCCTTTT+TGG | - | chr5.1:77184190-77184209 | MS.gene38011:CDS | 45.0% |
| ! | TCTGTTGTGGTTGAAGGTGT+TGG | + | chr5.1:77187370-77187389 | None:intergenic | 45.0% |
| ! | TGCTGTAGGTAGTTGGTCTA+GGG | - | chr5.1:77186312-77186331 | MS.gene38011:CDS | 45.0% |
| ! | TTATGAGTATGGAGGCACGT+GGG | - | chr5.1:77184580-77184599 | MS.gene38011:CDS | 45.0% |
| !! | AGTTGATGGTGGTCCAGTAT+TGG | + | chr5.1:77187458-77187477 | None:intergenic | 45.0% |
| !! | CTTGGTGCTTTCTTCTTAGC+TGG | + | chr5.1:77187310-77187329 | None:intergenic | 45.0% |
| !! | GTGTTCAAGCAAGTTGATGG+TGG | + | chr5.1:77187469-77187488 | None:intergenic | 45.0% |
| !!! | CTTTGTTTTTTAGGCCTGCC+TGG | + | chr5.1:77186970-77186989 | None:intergenic | 45.0% |
| AAACAAAGGACGCATGGGAC+TGG | - | chr5.1:77185902-77185921 | MS.gene38011:CDS | 50.0% | |
| AGGCAATGTGGAAAGCTGCT+AGG | - | chr5.1:77186206-77186225 | MS.gene38011:CDS | 50.0% | |
| ATGGTGGCAAGATTGGTGGA+AGG | + | chr5.1:77186933-77186952 | None:intergenic | 50.0% | |
| CACCTGCACCCAAGAAGAAA+GGG | - | chr5.1:77187284-77187303 | MS.gene38011:intron | 50.0% | |
| CCACCTGTTGCAACCAATAC+TGG | - | chr5.1:77187442-77187461 | MS.gene38011:intron | 50.0% | |
| CCAGCTTGTCCAAGTCAACT+AGG | + | chr5.1:77184622-77184641 | None:intergenic | 50.0% | |
| CCTGGTGCCCTTCTAACATA+TGG | + | chr5.1:77186952-77186971 | None:intergenic | 50.0% | |
| CGAGGTGTGAGTTTCAGGAT+TGG | + | chr5.1:77185481-77185500 | None:intergenic | 50.0% | |
| CTTAGCTGGCCCTTTCTTCT+TGG | + | chr5.1:77187296-77187315 | None:intergenic | 50.0% | |
| GACAAGCTGGTGAGAGAGTT+AGG | - | chr5.1:77184632-77184651 | MS.gene38011:CDS | 50.0% | |
| GAGATGAGTGAGCATGCTGT+AGG | - | chr5.1:77186298-77186317 | MS.gene38011:CDS | 50.0% | |
| GCAGTTGTGGTTGCAGTTGA+TGG | + | chr5.1:77187346-77187365 | None:intergenic | 50.0% | |
| GCTGGAGGAGAACTCAAAGA+TGG | - | chr5.1:77184689-77184708 | MS.gene38011:CDS | 50.0% | |
| GGTGCCCTTCTAACATATGG+TGG | + | chr5.1:77186949-77186968 | None:intergenic | 50.0% | |
| GTGAGCATGCTGTAGGTAGT+TGG | - | chr5.1:77186305-77186324 | MS.gene38011:CDS | 50.0% | |
| GTTGTGGCTAAGTGTGCTGA+TGG | - | chr5.1:77185316-77185335 | MS.gene38011:CDS | 50.0% | |
| GTTTGTACCTGATTCTCCCC+TGG | + | chr5.1:77187159-77187178 | None:intergenic | 50.0% | |
| TCCAGGTGAGCAATTGAAGG+AGG | - | chr5.1:77186186-77186205 | MS.gene38011:CDS | 50.0% | |
| TCTGATGAGGATACTGACCG+TGG | - | chr5.1:77185139-77185158 | MS.gene38011:CDS | 50.0% | |
| TGCAGGAAATGGGATCTGTC+TGG | - | chr5.1:77186667-77186686 | MS.gene38011:CDS | 50.0% | |
| TGCAGGTGATGCTTCTGTTG+TGG | + | chr5.1:77187383-77187402 | None:intergenic | 50.0% | |
| TGTGGAAGATGTGGTGAGCT+TGG | - | chr5.1:77187081-77187100 | MS.gene38011:CDS | 50.0% | |
| ! | CTTATGAGTATGGAGGCACG+TGG | - | chr5.1:77184579-77184598 | MS.gene38011:CDS | 50.0% |
| ! | CTTGTTGTGGATGCAGCAGT+TGG | + | chr5.1:77187418-77187437 | None:intergenic | 50.0% |
| ! | GATGGTCCAGCCTTTTTGCT+TGG | + | chr5.1:77187328-77187347 | None:intergenic | 50.0% |
| ! | GGCACATTGTTGCTTGCAAG+TGG | + | chr5.1:77187505-77187524 | None:intergenic | 50.0% |
| ! | TAGGTAGTTGGTCTAGGGCT+GGG | - | chr5.1:77186317-77186336 | MS.gene38011:CDS | 50.0% |
| ! | TCATGGTGCCTAAGAAGTGC+AGG | - | chr5.1:77187650-77187669 | MS.gene38011:CDS | 50.0% |
| !! | CCAGTATTGGTTGCAACAGG+TGG | + | chr5.1:77187445-77187464 | None:intergenic | 50.0% |
| !! | CCATATGTTAGAAGGGCACC+AGG | - | chr5.1:77186949-77186968 | MS.gene38011:CDS | 50.0% |
| !! | CCTAGTTGACTTGGACAAGC+TGG | - | chr5.1:77184619-77184638 | MS.gene38011:CDS | 50.0% |
| !! | GGTCCAGTATTGGTTGCAAC+AGG | + | chr5.1:77187448-77187467 | None:intergenic | 50.0% |
| !! | GTGACAGTGTTGCTTGCAGA+TGG | + | chr5.1:77187526-77187545 | None:intergenic | 50.0% |
| !! | TGAAGGTGTTGGTGCAGTTG+TGG | + | chr5.1:77187359-77187378 | None:intergenic | 50.0% |
| ACTGTGTGGTATGCTGTGGC+TGG | - | chr5.1:77184671-77184690 | MS.gene38011:CDS | 55.0% | |
| CCACCTGCACCCAAGAAGAA+AGG | - | chr5.1:77187283-77187302 | MS.gene38011:intron | 55.0% | |
| CCTTTCTTCTTGGGTGCAGG+TGG | + | chr5.1:77187286-77187305 | None:intergenic | 55.0% | |
| GACGAGCAGAGCTTTCACCA+TGG | + | chr5.1:77183979-77183998 | None:intergenic | 55.0% | |
| GCATCACCTGCAACCAAGAC+TGG | - | chr5.1:77187391-77187410 | MS.gene38011:intron | 55.0% | |
| GCCTCCTTCAATTGCTCACC+TGG | + | chr5.1:77186190-77186209 | None:intergenic | 55.0% | |
| GTAAGAAGGAAGCTGAGGGC+TGG | - | chr5.1:77186548-77186567 | MS.gene38011:CDS | 55.0% | |
| GTGACAGGATGCTTGCACCA+GGG | - | chr5.1:77187139-77187158 | MS.gene38011:CDS | 55.0% | |
| GTTGGTCCAGTCTTGGTTGC+AGG | + | chr5.1:77187400-77187419 | None:intergenic | 55.0% | |
| TGACAGGATGCTTGCACCAG+GGG | - | chr5.1:77187140-77187159 | MS.gene38011:CDS | 55.0% | |
| TGCAGCAGTTGGTCCAGTCT+TGG | + | chr5.1:77187407-77187426 | None:intergenic | 55.0% | |
| ! | GTAGGTAGTTGGTCTAGGGC+TGG | - | chr5.1:77186316-77186335 | MS.gene38011:CDS | 55.0% |
| !! | ATGTTAGAAGGGCACCAGGC+AGG | - | chr5.1:77186953-77186972 | MS.gene38011:CDS | 55.0% |
| !! | CTGAGGGCTGGTCTCCAAAT+TGG | - | chr5.1:77186560-77186579 | MS.gene38011:CDS | 55.0% |
| !! | GGCTGGTCTCCAAATTGGAG+TGG | - | chr5.1:77186565-77186584 | MS.gene38011:CDS | 55.0% |
| GCTTGCACCAGGGGAGAATC+AGG | - | chr5.1:77187149-77187168 | MS.gene38011:CDS | 60.0% | |
| GGCCCTTTCTTCTTGGGTGC+AGG | + | chr5.1:77187289-77187308 | None:intergenic | 60.0% | |
| GGTGACAGGATGCTTGCACC+AGG | - | chr5.1:77187138-77187157 | MS.gene38011:CDS | 60.0% | |
| GTGTGGTATGCTGTGGCTGG+AGG | - | chr5.1:77184674-77184693 | MS.gene38011:CDS | 60.0% | |
| TTGGGTGCAGGTGGTGCTTG+AGG | + | chr5.1:77187277-77187296 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 77183941 | 77187744 | 77183941 | ID=MS.gene38011 |
| chr5.1 | mRNA | 77183941 | 77187744 | 77183941 | ID=MS.gene38011.t1;Parent=MS.gene38011 |
| chr5.1 | exon | 77187650 | 77187744 | 77187650 | ID=MS.gene38011.t1.exon1;Parent=MS.gene38011.t1 |
| chr5.1 | CDS | 77187650 | 77187744 | 77187650 | ID=cds.MS.gene38011.t1;Parent=MS.gene38011.t1 |
| chr5.1 | exon | 77185686 | 77187195 | 77185686 | ID=MS.gene38011.t1.exon2;Parent=MS.gene38011.t1 |
| chr5.1 | CDS | 77185686 | 77187195 | 77185686 | ID=cds.MS.gene38011.t1;Parent=MS.gene38011.t1 |
| chr5.1 | exon | 77184918 | 77185588 | 77184918 | ID=MS.gene38011.t1.exon3;Parent=MS.gene38011.t1 |
| chr5.1 | CDS | 77184918 | 77185588 | 77184918 | ID=cds.MS.gene38011.t1;Parent=MS.gene38011.t1 |
| chr5.1 | exon | 77184515 | 77184830 | 77184515 | ID=MS.gene38011.t1.exon4;Parent=MS.gene38011.t1 |
| chr5.1 | CDS | 77184515 | 77184830 | 77184515 | ID=cds.MS.gene38011.t1;Parent=MS.gene38011.t1 |
| chr5.1 | exon | 77183941 | 77184432 | 77183941 | ID=MS.gene38011.t1.exon5;Parent=MS.gene38011.t1 |
| chr5.1 | CDS | 77183941 | 77184432 | 77183941 | ID=cds.MS.gene38011.t1;Parent=MS.gene38011.t1 |
| Gene Sequence |
| Protein sequence |
