Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38049.t1 | XP_003617951.1 | 98.7 | 792 | 10 | 0 | 1 | 792 | 1 | 792 | 0.00E+00 | 1509.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38049.t1 | F4JFN3 | 77.2 | 801 | 172 | 6 | 1 | 792 | 1 | 799 | 0.0e+00 | 1166.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38049.t1 | G7KEN6 | 98.7 | 792 | 10 | 0 | 1 | 792 | 1 | 792 | 0.0e+00 | 1509.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38049 | MS.gene49154 | PPI |
| MS.gene38049 | MS.gene006231 | PPI |
| MS.gene81285 | MS.gene38049 | PPI |
| MS.gene58998 | MS.gene38049 | PPI |
| MS.gene81288 | MS.gene38049 | PPI |
| MS.gene38049 | MS.gene30654 | PPI |
| MS.gene38049 | MS.gene27084 | PPI |
| MS.gene38049 | MS.gene75389 | PPI |
| MS.gene020834 | MS.gene38049 | PPI |
| MS.gene38262 | MS.gene38049 | PPI |
| MS.gene38049 | MS.gene040499 | PPI |
| MS.gene24136 | MS.gene38049 | PPI |
| MS.gene37988 | MS.gene38049 | PPI |
| MS.gene38049 | MS.gene64225 | PPI |
| MS.gene37989 | MS.gene38049 | PPI |
| MS.gene64024 | MS.gene38049 | PPI |
| MS.gene38049 | MS.gene62607 | PPI |
| MS.gene38261 | MS.gene38049 | PPI |
| MS.gene029690 | MS.gene38049 | PPI |
| MS.gene38049 | MS.gene75388 | PPI |
| MS.gene38049 | MS.gene60613 | PPI |
| MS.gene38049 | MS.gene62123 | PPI |
| MS.gene38049 | MS.gene64023 | PPI |
| MS.gene020833 | MS.gene38049 | PPI |
| MS.gene38049 | MS.gene061126 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38049.t1 | MTR_5g097320 | 98.737 | 792 | 10 | 0 | 1 | 792 | 1 | 792 | 0.0 | 1617 |
| MS.gene38049.t1 | MTR_0009s0390 | 70.270 | 703 | 204 | 3 | 89 | 788 | 81 | 781 | 0.0 | 1004 |
| MS.gene38049.t1 | MTR_1g025430 | 46.067 | 712 | 324 | 15 | 89 | 755 | 77 | 773 | 0.0 | 601 |
| MS.gene38049.t1 | MTR_6g452990 | 47.041 | 676 | 338 | 9 | 89 | 755 | 4 | 668 | 0.0 | 588 |
| MS.gene38049.t1 | MTR_1g099840 | 45.914 | 673 | 335 | 9 | 89 | 755 | 9 | 658 | 0.0 | 564 |
| MS.gene38049.t1 | MTR_5g096430 | 45.414 | 676 | 346 | 10 | 90 | 755 | 5 | 667 | 0.0 | 560 |
| MS.gene38049.t1 | MTR_5g096460 | 45.414 | 676 | 346 | 10 | 90 | 755 | 5 | 667 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38049.t1 | AT3G07770 | 78.333 | 780 | 160 | 5 | 1 | 773 | 1 | 778 | 0.0 | 1213 |
| MS.gene38049.t1 | AT3G07770 | 78.333 | 780 | 160 | 5 | 1 | 773 | 1 | 778 | 0.0 | 1213 |
| MS.gene38049.t1 | AT3G07770 | 78.333 | 780 | 160 | 5 | 1 | 773 | 1 | 778 | 0.0 | 1213 |
| MS.gene38049.t1 | AT2G04030 | 68.521 | 737 | 223 | 4 | 55 | 788 | 41 | 771 | 0.0 | 1018 |
| MS.gene38049.t1 | AT2G04030 | 68.250 | 737 | 222 | 5 | 55 | 788 | 41 | 768 | 0.0 | 1009 |
| MS.gene38049.t1 | AT4G24190 | 45.582 | 713 | 340 | 12 | 81 | 755 | 68 | 770 | 0.0 | 576 |
| MS.gene38049.t1 | AT4G24190 | 45.582 | 713 | 340 | 12 | 81 | 755 | 68 | 770 | 0.0 | 576 |
| MS.gene38049.t1 | AT5G52640 | 46.381 | 677 | 342 | 9 | 89 | 755 | 4 | 669 | 0.0 | 565 |
| MS.gene38049.t1 | AT5G56030 | 45.347 | 677 | 347 | 10 | 89 | 755 | 4 | 667 | 0.0 | 559 |
| MS.gene38049.t1 | AT5G56010 | 45.347 | 677 | 347 | 10 | 89 | 755 | 4 | 667 | 0.0 | 558 |
| MS.gene38049.t1 | AT5G56000 | 45.347 | 677 | 347 | 10 | 89 | 755 | 4 | 667 | 0.0 | 557 |
| MS.gene38049.t1 | AT5G56030 | 43.484 | 706 | 347 | 11 | 89 | 755 | 4 | 696 | 0.0 | 543 |
Find 180 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGGCAAACACTTGAAAT+TGG | 0.131640 | 5.1:+77658376 | MS.gene38049:CDS |
| CCACTCTATTATCAGGAATT+TGG | 0.164620 | 5.1:+77659350 | MS.gene38049:CDS |
| CACATGAAGTCTTATATTCT+TGG | 0.170508 | 5.1:-77657749 | None:intergenic |
| AACAACTTAATTGGTCAATT+TGG | 0.187122 | 5.1:+77656394 | MS.gene38049:CDS |
| TGCAAAGAACACACCTTTCT+TGG | 0.234178 | 5.1:+77658559 | MS.gene38049:CDS |
| ACAAAAGATCAATCGCTCTT+AGG | 0.241557 | 5.1:-77659507 | None:intergenic |
| TGTTTCTCAGGGAACTTATT+AGG | 0.248250 | 5.1:+77655245 | MS.gene38049:CDS |
| ATTCAATCTGATAAAGATAA+TGG | 0.255102 | 5.1:+77656062 | MS.gene38049:CDS |
| CAAATGAGACCCAACCTATC+TGG | 0.256609 | 5.1:+77657283 | MS.gene38049:CDS |
| GCTAATGAAGGCACAAACTA+TGG | 0.276666 | 5.1:+77659269 | MS.gene38049:CDS |
| CCAAGCTGTGCTGGATTATC+AGG | 0.281050 | 5.1:-77659955 | None:intergenic |
| TCCTCTTTAGTGACTTCTTT+AGG | 0.283016 | 5.1:-77657407 | None:intergenic |
| TGGATTGCAACCTCATCTAT+TGG | 0.284889 | 5.1:-77658721 | None:intergenic |
| GGTGCTGACAACAACTTAAT+TGG | 0.303646 | 5.1:+77656385 | MS.gene38049:CDS |
| TTCCCAAACATATTGCTTAT+CGG | 0.305484 | 5.1:-77656578 | None:intergenic |
| GTCCTGGTGTCAGGAAAATT+TGG | 0.316123 | 5.1:+77659120 | MS.gene38049:CDS |
| GTTCCTGCCTACGCTCCATC+TGG | 0.323157 | 5.1:+77657700 | MS.gene38049:CDS |
| ACTTCAGCCTCTATAGTTTC+TGG | 0.326441 | 5.1:-77660069 | None:intergenic |
| TTGACAAAACTCAAGTATCT+TGG | 0.328697 | 5.1:-77657922 | None:intergenic |
| AAGTCTTATATTCTTGGTCT+TGG | 0.338011 | 5.1:-77657743 | None:intergenic |
| AACGTCTTGCTCCGTTGCTT+CGG | 0.343341 | 5.1:+77658426 | MS.gene38049:CDS |
| TTTGGTTTCAAGTGGATTTA+CGG | 0.346354 | 5.1:+77659540 | MS.gene38049:CDS |
| TATCTTTATCAGATTGAATT+CGG | 0.348716 | 5.1:-77656058 | None:intergenic |
| GGATCCAGCTGAGGCGAAAA+AGG | 0.350990 | 5.1:+77657058 | MS.gene38049:CDS |
| AGTGCATAGTCATACTTCTT+TGG | 0.352271 | 5.1:-77656904 | None:intergenic |
| GACTGGATTAAGAAACGTTT+GGG | 0.359599 | 5.1:+77659045 | MS.gene38049:CDS |
| ACATATTGCTTATCGGATCT+TGG | 0.360519 | 5.1:-77656571 | None:intergenic |
| GATCCGATAAGCAATATGTT+TGG | 0.367611 | 5.1:+77656575 | MS.gene38049:CDS |
| TGTAGGACTATGAAAAGTTC+TGG | 0.370106 | 5.1:+77658348 | MS.gene38049:intron |
| GTATGGCTCTTGGTGGTAAA+TGG | 0.382991 | 5.1:+77660001 | MS.gene38049:CDS |
| CAAAAGATCAATCGCTCTTA+GGG | 0.385230 | 5.1:-77659506 | None:intergenic |
| TTTCATTCAATAGGATAGTA+AGG | 0.386928 | 5.1:+77656357 | MS.gene38049:intron |
| TGAGCGGACTCAAAATGATT+AGG | 0.388104 | 5.1:-77660030 | None:intergenic |
| TGCAGGGTGAGGTAGAATTT+AGG | 0.394366 | 5.1:+77657665 | MS.gene38049:intron |
| GTATTAAATTCTGAGAAATC+TGG | 0.394667 | 5.1:+77654969 | MS.gene38049:CDS |
| TTTGGCAAACACTTGAAATT+GGG | 0.396537 | 5.1:+77658377 | MS.gene38049:CDS |
| AATATACACTTGGCAGGAAA+AGG | 0.400859 | 5.1:+77656875 | MS.gene38049:CDS |
| TCGCCTTGTGTCCTGGTGTC+AGG | 0.401511 | 5.1:+77659111 | MS.gene38049:CDS |
| ATCTTTCCTCCAAGCTGTGC+TGG | 0.401912 | 5.1:-77659964 | None:intergenic |
| GAGCTCTTCGCCTTGTGTCC+TGG | 0.409189 | 5.1:+77659104 | MS.gene38049:CDS |
| AGTCTTATATTCTTGGTCTT+GGG | 0.413260 | 5.1:-77657742 | None:intergenic |
| ATCCGATAAGCAATATGTTT+GGG | 0.413273 | 5.1:+77656576 | MS.gene38049:CDS |
| ACCCTGACCACTCTATTATC+AGG | 0.413610 | 5.1:+77659343 | MS.gene38049:CDS |
| TTCATCTGCTTACTCCCATT+CGG | 0.414659 | 5.1:+77654334 | MS.gene38049:CDS |
| TTCAATCTGATAAAGATAAT+GGG | 0.415563 | 5.1:+77656063 | MS.gene38049:CDS |
| TTACCTCAGTCTTCTCATCT+TGG | 0.416217 | 5.1:-77657085 | None:intergenic |
| AGCAAGGAAGACTTGGATCT+AGG | 0.417696 | 5.1:+77658784 | MS.gene38049:CDS |
| AGACTGTTGTTGAGAAGTAC+TGG | 0.424364 | 5.1:+77657247 | MS.gene38049:CDS |
| TGACAAAACTCAAGTATCTT+GGG | 0.425510 | 5.1:-77657921 | None:intergenic |
| GAAAAGTTCTGGGATAACTT+TGG | 0.427899 | 5.1:+77658359 | MS.gene38049:CDS |
| CTTGGAGAAACTTGCGGAGA+AGG | 0.430733 | 5.1:+77658577 | MS.gene38049:CDS |
| CCTCTTGGAATCAACTTCTC+AGG | 0.431495 | 5.1:-77656646 | None:intergenic |
| GTAACAAGGAAGTGTTTCTC+AGG | 0.432748 | 5.1:+77655233 | MS.gene38049:CDS |
| ACAAGCTTCTCAATCCTCTC+TGG | 0.433027 | 5.1:-77656822 | None:intergenic |
| CTTAGGGCCTCTTGATCGTC+AGG | 0.435461 | 5.1:-77659490 | None:intergenic |
| TGACTGGATTAAGAAACGTT+TGG | 0.435632 | 5.1:+77659044 | MS.gene38049:CDS |
| CTTCAGCCTCTATAGTTTCT+GGG | 0.442833 | 5.1:-77660068 | None:intergenic |
| TACCTCTCTGTTGTCGCTCA+TGG | 0.442910 | 5.1:-77658188 | None:intergenic |
| TTTAATACGGAGTACCATCT+TGG | 0.447727 | 5.1:-77654954 | None:intergenic |
| AGATGACTTCGATGGAGAAC+TGG | 0.450154 | 5.1:+77657789 | MS.gene38049:CDS |
| ATATTGGAAATGAGACAAAC+TGG | 0.453616 | 5.1:-77656857 | None:intergenic |
| GAAAACATTTAACGAATACT+TGG | 0.455803 | 5.1:+77657448 | MS.gene38049:CDS |
| GGAGACGGAGGAAGAGCGTT+TGG | 0.457467 | 5.1:-77654258 | None:intergenic |
| TCCGCAAGTTTCTCCAAGAA+AGG | 0.458632 | 5.1:-77658572 | None:intergenic |
| TCGCCTTACACTGCACCTTA+AGG | 0.460271 | 5.1:+77656672 | MS.gene38049:CDS |
| GAACATGAAACCAGATCAAA+AGG | 0.465967 | 5.1:+77658502 | MS.gene38049:CDS |
| AGGAAAGATATACGAGATGA+TGG | 0.466450 | 5.1:+77659978 | MS.gene38049:CDS |
| TAACGAATACTTGGAGCCAT+TGG | 0.466806 | 5.1:+77657457 | MS.gene38049:CDS |
| TTATGCAGTGATACAGGCAT+TGG | 0.473198 | 5.1:+77656170 | MS.gene38049:intron |
| TAAAACTAACCCAGATAGGT+TGG | 0.474462 | 5.1:-77657293 | None:intergenic |
| ATTTGGTTGGTCTGCGAACA+TGG | 0.475124 | 5.1:+77659137 | MS.gene38049:CDS |
| AAAGGAAAAGGAAATGAAGC+AGG | 0.476641 | 5.1:+77659005 | MS.gene38049:CDS |
| AGATTTCTCAGAATTTAATA+CGG | 0.477390 | 5.1:-77654967 | None:intergenic |
| TTCCCAGATGGAGCGTAGGC+AGG | 0.477582 | 5.1:-77657703 | None:intergenic |
| TGACATTAGCAAGGAAGACT+TGG | 0.479175 | 5.1:+77658777 | MS.gene38049:CDS |
| CGCGAAGTGCGCCGCCGTAA+CGG | 0.481659 | 5.1:-77654289 | None:intergenic |
| TGGTACTCAAATTTCTCAGC+TGG | 0.482191 | 5.1:-77655083 | None:intergenic |
| TGATGAAGAGTTTATCAGCT+TGG | 0.484199 | 5.1:+77658466 | MS.gene38049:CDS |
| TAAGAATGAGGAAAAGGAAA+AGG | 0.486144 | 5.1:+77658993 | MS.gene38049:CDS |
| TTGGCAGGTTAGTCGGCTCA+TGG | 0.486833 | 5.1:+77655186 | MS.gene38049:intron |
| ATAGCATCCTTCATTAGATC+AGG | 0.486977 | 5.1:-77656023 | None:intergenic |
| ATCATAAAACTAACCCAGAT+AGG | 0.486997 | 5.1:-77657297 | None:intergenic |
| AGGTGATAAGAATGAGGAAA+AGG | 0.490165 | 5.1:+77658987 | MS.gene38049:intron |
| CAGTAATGCTAGTGATGCCT+TGG | 0.495584 | 5.1:+77655971 | MS.gene38049:intron |
| AGTTTAGCTCGACAATTGAC+TGG | 0.495708 | 5.1:+77659028 | MS.gene38049:CDS |
| ATTTCCAATATACACTTGGC+AGG | 0.502520 | 5.1:+77656869 | MS.gene38049:CDS |
| CAGGAACTAGTTGACTGTCT+TGG | 0.504084 | 5.1:+77656203 | MS.gene38049:CDS |
| TGTTGAGAAGTACTGGGATT+GGG | 0.509707 | 5.1:+77657254 | MS.gene38049:CDS |
| GTACTTCTCAACAACAGTCT+TGG | 0.510001 | 5.1:-77657244 | None:intergenic |
| ATACCTTAAGGTGCAGTGTA+AGG | 0.510410 | 5.1:-77656675 | None:intergenic |
| TTCATGAATTCCATGCTAGC+GGG | 0.511537 | 5.1:-77659297 | None:intergenic |
| GTGCGCCGCCGTAACGGAGA+AGG | 0.513297 | 5.1:-77654283 | None:intergenic |
| CTTAATTGGTCAATTTGGTG+TGG | 0.515790 | 5.1:+77656399 | MS.gene38049:CDS |
| TTCCTGATAATAGAGTGGTC+AGG | 0.516335 | 5.1:-77659345 | None:intergenic |
| GTGGTCGAGCCTACTGAGGC+TGG | 0.520167 | 5.1:+77660090 | MS.gene38049:CDS |
| CCAAAATATCAAAACATACA+AGG | 0.521596 | 5.1:+77658741 | MS.gene38049:CDS |
| ATATACACTTGGCAGGAAAA+GGG | 0.521867 | 5.1:+77656876 | MS.gene38049:CDS |
| GTCTCCGCCCTTCTCCGTTA+CGG | 0.522940 | 5.1:+77654275 | MS.gene38049:CDS |
| GTAGGACTATGAAAAGTTCT+GGG | 0.524059 | 5.1:+77658349 | MS.gene38049:intron |
| AGGATCTGTCTCCTCAGCTA+TGG | 0.525265 | 5.1:-77656626 | None:intergenic |
| TTAATTGGTCAATTTGGTGT+GGG | 0.529032 | 5.1:+77656400 | MS.gene38049:CDS |
| AAAACTAACCCAGATAGGTT+GGG | 0.529739 | 5.1:-77657292 | None:intergenic |
| AAATGAGACCCAACCTATCT+GGG | 0.530516 | 5.1:+77657284 | MS.gene38049:CDS |
| TATGGGTGATCCCGCTAGCA+TGG | 0.531370 | 5.1:+77659287 | MS.gene38049:CDS |
| TTCATTTCAGATGACTTCGA+TGG | 0.532439 | 5.1:+77657781 | MS.gene38049:CDS |
| CCTGATAATCCAGCACAGCT+TGG | 0.534512 | 5.1:+77659955 | MS.gene38049:CDS |
| GATAATCCAGCACAGCTTGG+AGG | 0.535534 | 5.1:+77659958 | MS.gene38049:CDS |
| TCCTAAAGAAGTCACTAAAG+AGG | 0.536099 | 5.1:+77657406 | MS.gene38049:CDS |
| CCTCTATAGTTTCTGGGACA+TGG | 0.538472 | 5.1:-77660062 | None:intergenic |
| TTCCTGCCTACGCTCCATCT+GGG | 0.540612 | 5.1:+77657701 | MS.gene38049:CDS |
| GAGATGATGGGTATGGCTCT+TGG | 0.541355 | 5.1:+77659991 | MS.gene38049:CDS |
| ACCTTTCTTGGAGAAACTTG+CGG | 0.546313 | 5.1:+77658571 | MS.gene38049:CDS |
| CCATGTCCCAGAAACTATAG+AGG | 0.548274 | 5.1:+77660062 | MS.gene38049:CDS |
| CAATAGGATAGTAAGGGTGC+TGG | 0.548567 | 5.1:+77656364 | MS.gene38049:intron |
| TTGCTGCTGCAGGCTAATGA+AGG | 0.548694 | 5.1:+77659257 | MS.gene38049:intron |
| TCCTGATAATAGAGTGGTCA+GGG | 0.548965 | 5.1:-77659344 | None:intergenic |
| GTAACGGAGAAGGGCGGAGA+CGG | 0.549045 | 5.1:-77654273 | None:intergenic |
| GAGGAAACGGTTGGTCAGAA+AGG | 0.550346 | 5.1:+77658141 | MS.gene38049:CDS |
| GATATACGAGATGATGGGTA+TGG | 0.558270 | 5.1:+77659984 | MS.gene38049:CDS |
| AGTGTAAGGCGAGTTCCTCT+TGG | 0.558292 | 5.1:-77656661 | None:intergenic |
| GAGAAAGATGAATACCGAAT+GGG | 0.567401 | 5.1:-77654348 | None:intergenic |
| TGGTGTCAGGAAAATTTGGT+TGG | 0.568365 | 5.1:+77659124 | MS.gene38049:CDS |
| GATGCAGCTTTGGTTTCAAG+TGG | 0.569210 | 5.1:+77659532 | MS.gene38049:CDS |
| TGCGCCGCCGTAACGGAGAA+GGG | 0.569272 | 5.1:-77654282 | None:intergenic |
| GTTGGTCTGCGAACATGGAA+AGG | 0.569848 | 5.1:+77659142 | MS.gene38049:CDS |
| AACTAATCCTGACGATCAAG+AGG | 0.573204 | 5.1:+77659483 | MS.gene38049:CDS |
| ATTACGTCATCCTTCCCAGA+TGG | 0.574953 | 5.1:-77657715 | None:intergenic |
| CTAATGAAGGCACAAACTAT+GGG | 0.576380 | 5.1:+77659270 | MS.gene38049:CDS |
| TACAGAGCCTGATCTAATGA+AGG | 0.576601 | 5.1:+77656016 | MS.gene38049:CDS |
| TGGAATTCATGAAAAGCAGA+AGG | 0.576845 | 5.1:+77659307 | MS.gene38049:CDS |
| TGCCTACGCTCCATCTGGGA+AGG | 0.576861 | 5.1:+77657705 | MS.gene38049:CDS |
| CACGTGACACATTGAGTGGA+AGG | 0.579217 | 5.1:-77657966 | None:intergenic |
| TACTCAAATTTCTCAGCTGG+TGG | 0.579869 | 5.1:-77655080 | None:intergenic |
| TTGTTGAGAAGTACTGGGAT+TGG | 0.581708 | 5.1:+77657253 | MS.gene38049:CDS |
| TGGGAGTAAGCAGATGAAAG+TGG | 0.582193 | 5.1:-77654329 | None:intergenic |
| GCAATATGTTTGGGAAGGAG+AGG | 0.585310 | 5.1:+77656585 | MS.gene38049:CDS |
| TTTCCTGACACCAGGACACA+AGG | 0.586847 | 5.1:-77659114 | None:intergenic |
| TTTGGTGGATCCAATAGATG+AGG | 0.590144 | 5.1:+77658711 | MS.gene38049:CDS |
| AGGTGCGGATCATGAGGAAA+CGG | 0.590921 | 5.1:+77658128 | MS.gene38049:intron |
| AGGCATTGGTATGACTAAGC+AGG | 0.591667 | 5.1:+77656184 | MS.gene38049:CDS |
| ATTACAGGTGGAGGTTGATG+AGG | 0.592517 | 5.1:+77657037 | MS.gene38049:intron |
| TTCTGTAGGTGATAAGAATG+AGG | 0.593306 | 5.1:+77658981 | MS.gene38049:intron |
| GGAAAGATATACGAGATGAT+GGG | 0.595782 | 5.1:+77659979 | MS.gene38049:CDS |
| CTTGGAACTATTGCTCAAAG+TGG | 0.596448 | 5.1:+77656221 | MS.gene38049:CDS |
| TTTCATGAATTCCATGCTAG+CGG | 0.596609 | 5.1:-77659298 | None:intergenic |
| TCTCATTTCCAATATACACT+TGG | 0.601056 | 5.1:+77656865 | MS.gene38049:CDS |
| AGAAACTATAGAGGCTGAAG+TGG | 0.603669 | 5.1:+77660071 | MS.gene38049:CDS |
| GCGGATCATGAGGAAACGGT+TGG | 0.606904 | 5.1:+77658132 | MS.gene38049:CDS |
| ACGGAGAAGGGCGGAGACGG+AGG | 0.607948 | 5.1:-77654270 | None:intergenic |
| TTCATTCAATAGGATAGTAA+GGG | 0.610752 | 5.1:+77656358 | MS.gene38049:intron |
| GATAAGCAATATGTTTGGGA+AGG | 0.612331 | 5.1:+77656580 | MS.gene38049:CDS |
| GACTGTTGTTGAGAAGTACT+GGG | 0.614936 | 5.1:+77657248 | MS.gene38049:CDS |
| ATTTCACGTGACACATTGAG+TGG | 0.618251 | 5.1:-77657970 | None:intergenic |
| AAGACGGCAATACCTCAGCT+TGG | 0.624748 | 5.1:-77655103 | None:intergenic |
| CCTGAGAAGTTGATTCCAAG+AGG | 0.629531 | 5.1:+77656646 | MS.gene38049:CDS |
| AGAATGACACAAAACCAAGA+TGG | 0.630846 | 5.1:+77654940 | MS.gene38049:CDS |
| GATGAGTAAAACCGAAGCAA+CGG | 0.631540 | 5.1:-77658437 | None:intergenic |
| TGTATAAACTGTTAACAATG+AGG | 0.633998 | 5.1:-77655210 | None:intergenic |
| TGAAGTGGTCGAGCCTACTG+AGG | 0.634281 | 5.1:+77660086 | MS.gene38049:CDS |
| CCAAATTCCTGATAATAGAG+TGG | 0.641419 | 5.1:-77659350 | None:intergenic |
| CAAGACGTTTGTGATTCTCA+CGG | 0.644243 | 5.1:-77658412 | None:intergenic |
| ATGATGGGTATGGCTCTTGG+TGG | 0.648855 | 5.1:+77659994 | MS.gene38049:CDS |
| ACTAGTTGCATTAGATTCTG+CGG | 0.656854 | 5.1:-77655054 | None:intergenic |
| ATCCTTCCCAGATGGAGCGT+AGG | 0.657983 | 5.1:-77657707 | None:intergenic |
| GTGATGCCTTGGATAAGCTG+CGG | 0.659887 | 5.1:+77655982 | MS.gene38049:CDS |
| TAACAGTTTATACAGTAACA+AGG | 0.664231 | 5.1:+77655219 | MS.gene38049:CDS |
| GGAATTCATGAAAAGCAGAA+GGG | 0.664392 | 5.1:+77659308 | MS.gene38049:CDS |
| GCATGAAGGTGCGGATCATG+AGG | 0.668221 | 5.1:+77658122 | MS.gene38049:intron |
| TATTGGAAATGAGACAAACT+GGG | 0.669362 | 5.1:-77656856 | None:intergenic |
| GACATGGTACTGTGTTTGAG+CGG | 0.671668 | 5.1:-77660046 | None:intergenic |
| TAACAAGGAAGTGTTTCTCA+GGG | 0.675191 | 5.1:+77655234 | MS.gene38049:CDS |
| GAAATTTGAGTACCAAGCTG+AGG | 0.677594 | 5.1:+77655091 | MS.gene38049:CDS |
| TCCGCCCTTCTCCGTTACGG+CGG | 0.686445 | 5.1:+77654278 | MS.gene38049:CDS |
| TAGCTCATATACCATAGCTG+AGG | 0.691981 | 5.1:+77656615 | MS.gene38049:CDS |
| GGTTGATGAGGATCCAGCTG+AGG | 0.697511 | 5.1:+77657049 | MS.gene38049:CDS |
| GCCGCCGTAACGGAGAAGGG+CGG | 0.712660 | 5.1:-77654279 | None:intergenic |
| ATCCATGAGCGACAACAGAG+AGG | 0.716932 | 5.1:+77658186 | MS.gene38049:CDS |
| GTAAAGTGTGATGATGCCAA+TGG | 0.728238 | 5.1:-77657473 | None:intergenic |
| ATCATCACACTTTACCACAG+AGG | 0.738590 | 5.1:+77657481 | MS.gene38049:CDS |
| CAACCAAGATGAGAAGACTG+AGG | 0.741912 | 5.1:+77657082 | MS.gene38049:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTATTTATTTATTTAT+TGG | + | chr5.1:77658656-77658675 | MS.gene38049:intron | 0.0% |
| !!! | TTATTTTTTATTTTTTTTAT+AGG | + | chr5.1:77655690-77655709 | MS.gene38049:intron | 0.0% |
| !! | CAAATTATAAATTGAAATAA+TGG | + | chr5.1:77659423-77659442 | MS.gene38049:intron | 10.0% |
| !! | AAATCTTTAATCTAAACTAT+TGG | + | chr5.1:77659776-77659795 | MS.gene38049:intron | 15.0% |
| !! | ACTAATATACTAATAAAAGA+AGG | - | chr5.1:77656722-77656741 | None:intergenic | 15.0% |
| !! | AGAAAACTATTTATAGAAAT+CGG | + | chr5.1:77655608-77655627 | MS.gene38049:intron | 15.0% |
| !! | ATATGTGTAAAGTTAAAAAA+CGG | - | chr5.1:77657200-77657219 | None:intergenic | 15.0% |
| !!! | ATATATGTATATTTTTTGTG+TGG | + | chr5.1:77656520-77656539 | MS.gene38049:intron | 15.0% |
| !!! | ATATTGTGATATATTTGTTT+TGG | + | chr5.1:77655167-77655186 | MS.gene38049:intron | 15.0% |
| !! | AATAAAAGAAGGTTGAAAAT+GGG | - | chr5.1:77656711-77656730 | None:intergenic | 20.0% |
| !! | AATATTGAAAACAACAACAA+TGG | - | chr5.1:77654864-77654883 | None:intergenic | 20.0% |
| !! | AGATTTCTCAGAATTTAATA+CGG | - | chr5.1:77654970-77654989 | None:intergenic | 20.0% |
| !! | ATCCAAAATTAATTACGAAA+AGG | - | chr5.1:77658834-77658853 | None:intergenic | 20.0% |
| !! | ATTCAATCTGATAAAGATAA+TGG | + | chr5.1:77656062-77656081 | MS.gene38049:CDS | 20.0% |
| !! | TAATAAAAGAAGGTTGAAAA+TGG | - | chr5.1:77656712-77656731 | None:intergenic | 20.0% |
| !! | TATATAGTAGCAATTATTGA+GGG | - | chr5.1:77655410-77655429 | None:intergenic | 20.0% |
| !! | TATATATACTTTGATTCATC+TGG | + | chr5.1:77657550-77657569 | MS.gene38049:intron | 20.0% |
| !! | TATCTTTATCAGATTGAATT+CGG | - | chr5.1:77656061-77656080 | None:intergenic | 20.0% |
| !! | TTCAATCTGATAAAGATAAT+GGG | + | chr5.1:77656063-77656082 | MS.gene38049:CDS | 20.0% |
| !!! | ATAATGGTAATGTATTCTAT+TGG | + | chr5.1:77659439-77659458 | MS.gene38049:intron | 20.0% |
| !!! | ATTTTGGATTAATGCTATAT+TGG | + | chr5.1:77658845-77658864 | MS.gene38049:intron | 20.0% |
| !!! | GTATATTAGTTTCTTTATTC+TGG | + | chr5.1:77656732-77656751 | MS.gene38049:intron | 20.0% |
| !!! | TAATAAATATCCTTTTGATC+TGG | - | chr5.1:77658515-77658534 | None:intergenic | 20.0% |
| !!! | TTCCTTTTCGTAATTAATTT+TGG | + | chr5.1:77658829-77658848 | MS.gene38049:intron | 20.0% |
| !!! | TTGAAAAGAGATTTGTTTTT+GGG | + | chr5.1:77655011-77655030 | MS.gene38049:CDS | 20.0% |
| !!! | TTTGAAAAGAGATTTGTTTT+TGG | + | chr5.1:77655010-77655029 | MS.gene38049:CDS | 20.0% |
| ! | AACAACTTAATTGGTCAATT+TGG | + | chr5.1:77656394-77656413 | MS.gene38049:CDS | 25.0% |
| ! | AACTAACTATGTAGCTTATA+TGG | - | chr5.1:77654781-77654800 | None:intergenic | 25.0% |
| ! | AATGTTATGTTTCAGTGTTA+TGG | + | chr5.1:77655305-77655324 | MS.gene38049:intron | 25.0% |
| ! | ATCAAAATTTGTCTCATTAC+AGG | + | chr5.1:77657022-77657041 | MS.gene38049:intron | 25.0% |
| ! | ATCATAATTTCATGGACAAT+TGG | - | chr5.1:77657140-77657159 | None:intergenic | 25.0% |
| ! | ATTAACCTCTTGTAAAATCA+AGG | - | chr5.1:77655724-77655743 | None:intergenic | 25.0% |
| ! | CCAAAATATCAAAACATACA+AGG | + | chr5.1:77658741-77658760 | MS.gene38049:CDS | 25.0% |
| ! | CGTATTGTTGAAAATATCTT+TGG | + | chr5.1:77655891-77655910 | MS.gene38049:intron | 25.0% |
| ! | CTACTGTTATACAACAATTT+AGG | + | chr5.1:77659580-77659599 | MS.gene38049:intron | 25.0% |
| ! | CTATATAGTAGCAATTATTG+AGG | - | chr5.1:77655411-77655430 | None:intergenic | 25.0% |
| ! | GAAAACATTTAACGAATACT+TGG | + | chr5.1:77657448-77657467 | MS.gene38049:CDS | 25.0% |
| ! | GATGCTAAATATTTGGTAAA+TGG | + | chr5.1:77659841-77659860 | MS.gene38049:intron | 25.0% |
| ! | GTATTCTATTGGTAAATTTC+AGG | + | chr5.1:77659450-77659469 | MS.gene38049:intron | 25.0% |
| ! | TAACAGTTTATACAGTAACA+AGG | + | chr5.1:77655219-77655238 | MS.gene38049:CDS | 25.0% |
| ! | TATCCTCTAACTCAATTTAT+TGG | + | chr5.1:77659925-77659944 | MS.gene38049:intron | 25.0% |
| ! | TATTACATGTTGAAGTTTGT+TGG | + | chr5.1:77654641-77654660 | MS.gene38049:intron | 25.0% |
| ! | TGTATAAACTGTTAACAATG+AGG | - | chr5.1:77655213-77655232 | None:intergenic | 25.0% |
| ! | TTCATTCAATAGGATAGTAA+GGG | + | chr5.1:77656358-77656377 | MS.gene38049:intron | 25.0% |
| ! | TTCTTTACTTTAAATGCAGT+TGG | + | chr5.1:77656132-77656151 | MS.gene38049:intron | 25.0% |
| ! | TTTCATTCAATAGGATAGTA+AGG | + | chr5.1:77656357-77656376 | MS.gene38049:intron | 25.0% |
| !! | GTATTAAATTCTGAGAAATC+TGG | + | chr5.1:77654969-77654988 | MS.gene38049:CDS | 25.0% |
| !! | TAGTATCGAAGAAAATTATG+TGG | - | chr5.1:77658051-77658070 | None:intergenic | 25.0% |
| !! | TTATATGGTTTGAAACACTA+AGG | - | chr5.1:77654766-77654785 | None:intergenic | 25.0% |
| !! | TTCAACAATACGAAATTTTG+AGG | - | chr5.1:77655883-77655902 | None:intergenic | 25.0% |
| !! | TTTTAAATCTCACGTTTTTG+TGG | + | chr5.1:77654422-77654441 | MS.gene38049:intron | 25.0% |
| !! | TTTTACCTTGATTTTACAAG+AGG | + | chr5.1:77655716-77655735 | MS.gene38049:intron | 25.0% |
| !!! | AATTTTGTAGGTGCTATTTT+TGG | + | chr5.1:77658693-77658712 | MS.gene38049:intron | 25.0% |
| !!! | ATATATAGTGTTGACTATGT+CGG | - | chr5.1:77659661-77659680 | None:intergenic | 25.0% |
| !!! | ATATTTTTTGTGTGGTTTGA+AGG | + | chr5.1:77656528-77656547 | MS.gene38049:intron | 25.0% |
| !!! | CCAAGTTTTAAACTTCAAAA+AGG | - | chr5.1:77654827-77654846 | None:intergenic | 25.0% |
| !!! | CCTTGTATGTTTTGATATTT+TGG | - | chr5.1:77658744-77658763 | None:intergenic | 25.0% |
| !!! | CCTTTTTGAAGTTTAAAACT+TGG | + | chr5.1:77654824-77654843 | MS.gene38049:intron | 25.0% |
| !!! | CTTCATTTTAAGTTTTTAGC+TGG | + | chr5.1:77656491-77656510 | MS.gene38049:intron | 25.0% |
| !!! | CTTCTTTTTGAGAAAGATTT+AGG | + | chr5.1:77656278-77656297 | MS.gene38049:intron | 25.0% |
| !!! | CTTTTGCTATGTAATTTTGT+AGG | + | chr5.1:77658681-77658700 | MS.gene38049:intron | 25.0% |
| AAAATGAACACTGAAACTTG+TGG | - | chr5.1:77655551-77655570 | None:intergenic | 30.0% | |
| AAAATTTGTCTCATTACAGG+TGG | + | chr5.1:77657025-77657044 | MS.gene38049:intron | 30.0% | |
| AATATTTAGCATCATACGTG+AGG | - | chr5.1:77659834-77659853 | None:intergenic | 30.0% | |
| ACACCAATAAATTGAGTTAG+AGG | - | chr5.1:77659931-77659950 | None:intergenic | 30.0% | |
| AGCAGTTAAACTTTAACATC+TGG | - | chr5.1:77657164-77657183 | None:intergenic | 30.0% | |
| ATATTGGAAATGAGACAAAC+TGG | - | chr5.1:77656860-77656879 | None:intergenic | 30.0% | |
| ATCATAAAACTAACCCAGAT+AGG | - | chr5.1:77657300-77657319 | None:intergenic | 30.0% | |
| ATCCGATAAGCAATATGTTT+GGG | + | chr5.1:77656576-77656595 | MS.gene38049:CDS | 30.0% | |
| CAATATATTAACAATTGCGC+TGG | - | chr5.1:77655153-77655172 | None:intergenic | 30.0% | |
| CACGTATGATGCTAAATATT+TGG | + | chr5.1:77659834-77659853 | MS.gene38049:intron | 30.0% | |
| CTACTATATAGTTTGAGCAT+CGG | + | chr5.1:77655420-77655439 | MS.gene38049:intron | 30.0% | |
| CTTGTTGAATTTCTATGACA+TGG | - | chr5.1:77655775-77655794 | None:intergenic | 30.0% | |
| GCTCTGATGTATTATTTACT+TGG | + | chr5.1:77657891-77657910 | MS.gene38049:intron | 30.0% | |
| GTGTTAGAAATCTCATAGAA+TGG | + | chr5.1:77655640-77655659 | MS.gene38049:intron | 30.0% | |
| TAAGAATGAGGAAAAGGAAA+AGG | + | chr5.1:77658993-77659012 | MS.gene38049:CDS | 30.0% | |
| TAATTTGAACGCTAATGTGT+TGG | + | chr5.1:77657623-77657642 | MS.gene38049:intron | 30.0% | |
| TACTGTATAGTTTGAGCATT+GGG | + | chr5.1:77655281-77655300 | MS.gene38049:intron | 30.0% | |
| TATTGGAAATGAGACAAACT+GGG | - | chr5.1:77656859-77656878 | None:intergenic | 30.0% | |
| TCATAGAATGGCAAAATCTT+GGG | + | chr5.1:77655652-77655671 | MS.gene38049:intron | 30.0% | |
| TCTCATTTCCAATATACACT+TGG | + | chr5.1:77656865-77656884 | MS.gene38049:CDS | 30.0% | |
| TGACAAAACTCAAGTATCTT+GGG | - | chr5.1:77657924-77657943 | None:intergenic | 30.0% | |
| TGACATGGATCAAATACAAA+AGG | - | chr5.1:77655760-77655779 | None:intergenic | 30.0% | |
| TGGAAATTGGTTACTTGAAA+TGG | + | chr5.1:77657347-77657366 | MS.gene38049:intron | 30.0% | |
| TTCCCAAACATATTGCTTAT+CGG | - | chr5.1:77656581-77656600 | None:intergenic | 30.0% | |
| TTGACAAAACTCAAGTATCT+TGG | - | chr5.1:77657925-77657944 | None:intergenic | 30.0% | |
| TTTGGCAAACACTTGAAATT+GGG | + | chr5.1:77658377-77658396 | MS.gene38049:CDS | 30.0% | |
| ! | AAGTCTTATATTCTTGGTCT+TGG | - | chr5.1:77657746-77657765 | None:intergenic | 30.0% |
| ! | AGTCTTATATTCTTGGTCTT+GGG | - | chr5.1:77657745-77657764 | None:intergenic | 30.0% |
| ! | CACATGAAGTCTTATATTCT+TGG | - | chr5.1:77657752-77657771 | None:intergenic | 30.0% |
| ! | CATCTGGAATCATAATTTCA+TGG | - | chr5.1:77657148-77657167 | None:intergenic | 30.0% |
| ! | GAATTTTGTTGACATTAGCA+AGG | + | chr5.1:77658768-77658787 | MS.gene38049:CDS | 30.0% |
| ! | GATTTTCTTTGATTGTGAGT+AGG | + | chr5.1:77654911-77654930 | MS.gene38049:intron | 30.0% |
| ! | TTTCTTTTATGCAGTGATAC+AGG | + | chr5.1:77656164-77656183 | MS.gene38049:intron | 30.0% |
| ! | TTTGGTTTCAAGTGGATTTA+CGG | + | chr5.1:77659540-77659559 | MS.gene38049:CDS | 30.0% |
| !! | AAAGTTTTTGAAAGCTCTGA+AGG | + | chr5.1:77656250-77656269 | MS.gene38049:CDS | 30.0% |
| !! | ACCTCAGTTTTTCTCTAAAA+AGG | + | chr5.1:77657589-77657608 | MS.gene38049:intron | 30.0% |
| !! | AGATACTTGAGTTTTGTCAA+AGG | + | chr5.1:77657925-77657944 | MS.gene38049:CDS | 30.0% |
| !! | CTAAACTATTGGTGCTATAT+CGG | + | chr5.1:77659787-77659806 | MS.gene38049:intron | 30.0% |
| !! | TCCTTTTTAGAGAAAAACTG+AGG | - | chr5.1:77657593-77657612 | None:intergenic | 30.0% |
| !! | TTAATTGGTCAATTTGGTGT+GGG | + | chr5.1:77656400-77656419 | MS.gene38049:CDS | 30.0% |
| !! | TTTCTTTATTCTGGAGCTTA+TGG | + | chr5.1:77656741-77656760 | MS.gene38049:intron | 30.0% |
| !!! | TGTGATATATTTGTTTTGGC+AGG | + | chr5.1:77655171-77655190 | MS.gene38049:intron | 30.0% |
| AAAACTAACCCAGATAGGTT+GGG | - | chr5.1:77657295-77657314 | None:intergenic | 35.0% | |
| AAACTTGTGGCAATCTATTG+GGG | - | chr5.1:77655538-77655557 | None:intergenic | 35.0% | |
| AAAGGAAAAGGAAATGAAGC+AGG | + | chr5.1:77659005-77659024 | MS.gene38049:CDS | 35.0% | |
| AATATACACTTGGCAGGAAA+AGG | + | chr5.1:77656875-77656894 | MS.gene38049:CDS | 35.0% | |
| ACAAAAGATCAATCGCTCTT+AGG | - | chr5.1:77659510-77659529 | None:intergenic | 35.0% | |
| ACAGATAAAGATTGCACTTG+AGG | - | chr5.1:77657521-77657540 | None:intergenic | 35.0% | |
| ACATATTGCTTATCGGATCT+TGG | - | chr5.1:77656574-77656593 | None:intergenic | 35.0% | |
| ACTAGTTGCATTAGATTCTG+CGG | - | chr5.1:77655057-77655076 | None:intergenic | 35.0% | |
| AGAATGACACAAAACCAAGA+TGG | + | chr5.1:77654940-77654959 | MS.gene38049:CDS | 35.0% | |
| AGGAAAGATATACGAGATGA+TGG | + | chr5.1:77659978-77659997 | MS.gene38049:CDS | 35.0% | |
| AGGTGATAAGAATGAGGAAA+AGG | + | chr5.1:77658987-77659006 | MS.gene38049:intron | 35.0% | |
| AGTGCATAGTCATACTTCTT+TGG | - | chr5.1:77656907-77656926 | None:intergenic | 35.0% | |
| ATAGCATCCTTCATTAGATC+AGG | - | chr5.1:77656026-77656045 | None:intergenic | 35.0% | |
| ATATACACTTGGCAGGAAAA+GGG | + | chr5.1:77656876-77656895 | MS.gene38049:CDS | 35.0% | |
| ATTACTATCAGTGTCATGTC+AGG | - | chr5.1:77654493-77654512 | None:intergenic | 35.0% | |
| ATTACTGTGAAAAAGAACGC+AGG | - | chr5.1:77655958-77655977 | None:intergenic | 35.0% | |
| ATTTCCAATATACACTTGGC+AGG | + | chr5.1:77656869-77656888 | MS.gene38049:CDS | 35.0% | |
| CAAAAGATCAATCGCTCTTA+GGG | - | chr5.1:77659509-77659528 | None:intergenic | 35.0% | |
| CATAACAGGAGAACAGAATA+AGG | - | chr5.1:77656314-77656333 | None:intergenic | 35.0% | |
| CCAAATTCCTGATAATAGAG+TGG | - | chr5.1:77659353-77659372 | None:intergenic | 35.0% | |
| CCACTCTATTATCAGGAATT+TGG | + | chr5.1:77659350-77659369 | MS.gene38049:CDS | 35.0% | |
| CTACTGTATAGTTTGAGCAT+TGG | + | chr5.1:77655280-77655299 | MS.gene38049:intron | 35.0% | |
| CTCAAACTATACAGTAGTGA+TGG | - | chr5.1:77655277-77655296 | None:intergenic | 35.0% | |
| CTCATAGAATGGCAAAATCT+TGG | + | chr5.1:77655651-77655670 | MS.gene38049:intron | 35.0% | |
| CTTGTCAAATCTCTATGACA+TGG | - | chr5.1:77655818-77655837 | None:intergenic | 35.0% | |
| CTTTGGCAAACACTTGAAAT+TGG | + | chr5.1:77658376-77658395 | MS.gene38049:CDS | 35.0% | |
| GAAACTTGTGGCAATCTATT+GGG | - | chr5.1:77655539-77655558 | None:intergenic | 35.0% | |
| GAACATGAAACCAGATCAAA+AGG | + | chr5.1:77658502-77658521 | MS.gene38049:CDS | 35.0% | |
| GACTGGATTAAGAAACGTTT+GGG | + | chr5.1:77659045-77659064 | MS.gene38049:CDS | 35.0% | |
| GAGAAAGATGAATACCGAAT+GGG | - | chr5.1:77654351-77654370 | None:intergenic | 35.0% | |
| GATAAGCAATATGTTTGGGA+AGG | + | chr5.1:77656580-77656599 | MS.gene38049:CDS | 35.0% | |
| GATCCGATAAGCAATATGTT+TGG | + | chr5.1:77656575-77656594 | MS.gene38049:CDS | 35.0% | |
| GCAGCTGGTAAAATATTAAC+AGG | - | chr5.1:77658317-77658336 | None:intergenic | 35.0% | |
| GGAAAGATATACGAGATGAT+GGG | + | chr5.1:77659979-77659998 | MS.gene38049:CDS | 35.0% | |
| GGAATTCATGAAAAGCAGAA+GGG | + | chr5.1:77659308-77659327 | MS.gene38049:CDS | 35.0% | |
| GTAGCAATTATTGAGGGAAA+AGG | - | chr5.1:77655404-77655423 | None:intergenic | 35.0% | |
| GTAGGACTATGAAAAGTTCT+GGG | + | chr5.1:77658349-77658368 | MS.gene38049:intron | 35.0% | |
| TAAAACTAACCCAGATAGGT+TGG | - | chr5.1:77657296-77657315 | None:intergenic | 35.0% | |
| TATATTAACAATTGCGCTGG+AGG | - | chr5.1:77655150-77655169 | None:intergenic | 35.0% | |
| TATTAGACTGACGTCAATAC+TGG | + | chr5.1:77659678-77659697 | MS.gene38049:intron | 35.0% | |
| TCAAACCAAAATGTGCATTG+TGG | + | chr5.1:77659893-77659912 | MS.gene38049:intron | 35.0% | |
| TCCTAAAGAAGTCACTAAAG+AGG | + | chr5.1:77657406-77657425 | MS.gene38049:CDS | 35.0% | |
| TCCTCTTTAGTGACTTCTTT+AGG | - | chr5.1:77657410-77657429 | None:intergenic | 35.0% | |
| TGAAACTTGTGGCAATCTAT+TGG | - | chr5.1:77655540-77655559 | None:intergenic | 35.0% | |
| TGACATGGATCAAATACGAA+AGG | - | chr5.1:77655803-77655822 | None:intergenic | 35.0% | |
| TGACTGGATTAAGAAACGTT+TGG | + | chr5.1:77659044-77659063 | MS.gene38049:CDS | 35.0% | |
| TGATGAAGAGTTTATCAGCT+TGG | + | chr5.1:77658466-77658485 | MS.gene38049:CDS | 35.0% | |
| TGGAATTCATGAAAAGCAGA+AGG | + | chr5.1:77659307-77659326 | MS.gene38049:CDS | 35.0% | |
| TGTAGGACTATGAAAAGTTC+TGG | + | chr5.1:77658348-77658367 | MS.gene38049:intron | 35.0% | |
| TGTTTCTCAGGGAACTTATT+AGG | + | chr5.1:77655245-77655264 | MS.gene38049:CDS | 35.0% | |
| TTACTGTGAAAAAGAACGCA+GGG | - | chr5.1:77655957-77655976 | None:intergenic | 35.0% | |
| TTAGCATCAAACACTTCTGA+TGG | + | chr5.1:77654697-77654716 | MS.gene38049:intron | 35.0% | |
| TTCATTTCAGATGACTTCGA+TGG | + | chr5.1:77657781-77657800 | MS.gene38049:CDS | 35.0% | |
| TTCTGTAGGTGATAAGAATG+AGG | + | chr5.1:77658981-77659000 | MS.gene38049:intron | 35.0% | |
| TTCTTTGATTGTGAGTAGGT+GGG | + | chr5.1:77654915-77654934 | MS.gene38049:intron | 35.0% | |
| TTGAATGTAATCACGTGTGT+CGG | + | chr5.1:77654540-77654559 | MS.gene38049:intron | 35.0% | |
| TTTCATGAATTCCATGCTAG+CGG | - | chr5.1:77659301-77659320 | None:intergenic | 35.0% | |
| TTTCTTTGATTGTGAGTAGG+TGG | + | chr5.1:77654914-77654933 | MS.gene38049:intron | 35.0% | |
| ! | AAAGGCTTTTGACATGATTC+TGG | + | chr5.1:77658159-77658178 | MS.gene38049:CDS | 35.0% |
| ! | AAGGCTTTTGACATGATTCT+GGG | + | chr5.1:77658160-77658179 | MS.gene38049:CDS | 35.0% |
| ! | AATTTCACGTCCAGTTTTCA+AGG | - | chr5.1:77656987-77657006 | None:intergenic | 35.0% |
| ! | ACTATGCACTCATGATCTTT+TGG | + | chr5.1:77656917-77656936 | MS.gene38049:intron | 35.0% |
| ! | ACTGTATAGTTTGAGCATTG+GGG | + | chr5.1:77655282-77655301 | MS.gene38049:intron | 35.0% |
| ! | ACTTACCACAATGCACATTT+TGG | - | chr5.1:77659901-77659920 | None:intergenic | 35.0% |
| ! | ATTTCACGTCCAGTTTTCAA+GGG | - | chr5.1:77656986-77657005 | None:intergenic | 35.0% |
| ! | ATTTCATGGACAATTGGTTC+AGG | - | chr5.1:77657134-77657153 | None:intergenic | 35.0% |
| ! | CTAATGAAGGCACAAACTAT+GGG | + | chr5.1:77659270-77659289 | MS.gene38049:CDS | 35.0% |
| ! | CTTAATTGGTCAATTTGGTG+TGG | + | chr5.1:77656399-77656418 | MS.gene38049:CDS | 35.0% |
| ! | GAAGTTTAAAACTTGGAGCT+TGG | + | chr5.1:77654831-77654850 | MS.gene38049:intron | 35.0% |
| ! | GGAATTTTCGACATACCTTA+AGG | - | chr5.1:77656690-77656709 | None:intergenic | 35.0% |
| ! | GGATAAAAGTGATGATGATG+TGG | + | chr5.1:77656466-77656485 | MS.gene38049:intron | 35.0% |
| ! | TTTAATACGGAGTACCATCT+TGG | - | chr5.1:77654957-77654976 | None:intergenic | 35.0% |
| ! | TTTCATGGACAATTGGTTCA+GGG | - | chr5.1:77657133-77657152 | None:intergenic | 35.0% |
| ! | TTTGAGATTGTTTCATTCCC+TGG | + | chr5.1:77656960-77656979 | MS.gene38049:intron | 35.0% |
| ! | TTTTCCTGCCAAGTGTATAT+TGG | - | chr5.1:77656876-77656895 | None:intergenic | 35.0% |
| !! | ACGAAGGTGTTTCATTCAAT+AGG | + | chr5.1:77656348-77656367 | MS.gene38049:intron | 35.0% |
| !! | ATGTAGTTTGCTGTTTCTGT+AGG | + | chr5.1:77658967-77658986 | MS.gene38049:intron | 35.0% |
| !! | GAAAAGTTCTGGGATAACTT+TGG | + | chr5.1:77658359-77658378 | MS.gene38049:CDS | 35.0% |
| !! | TAAATCAAATTTGCTGCTGC+AGG | + | chr5.1:77659247-77659266 | MS.gene38049:intron | 35.0% |
| !! | TAACAAGGAAGTGTTTCTCA+GGG | + | chr5.1:77655234-77655253 | MS.gene38049:CDS | 35.0% |
| !! | TCTCTTTTAAGAACACACCT+TGG | + | chr5.1:77655508-77655527 | MS.gene38049:intron | 35.0% |
| !! | TCTCTTTTAAGAGCTTACCT+TGG | + | chr5.1:77655368-77655387 | MS.gene38049:intron | 35.0% |
| !!! | AGTTTGTTGGTTTTACGTTG+TGG | + | chr5.1:77654654-77654673 | MS.gene38049:intron | 35.0% |
| !!! | ATTTGTTTTGGCAGGTTAGT+CGG | + | chr5.1:77655179-77655198 | MS.gene38049:intron | 35.0% |
| !!! | GGTCTGTTTTTGAGTGATTA+TGG | + | chr5.1:77654443-77654462 | MS.gene38049:intron | 35.0% |
| !!! | TTTGTAGGTGCTATTTTTGG+TGG | + | chr5.1:77658696-77658715 | MS.gene38049:intron | 35.0% |
| !!! | TTTTTTGTGTGGTTTGAAGG+TGG | + | chr5.1:77656531-77656550 | MS.gene38049:intron | 35.0% |
| AAATGAGACCCAACCTATCT+GGG | + | chr5.1:77657284-77657303 | MS.gene38049:CDS | 40.0% | |
| AACTAATCCTGACGATCAAG+AGG | + | chr5.1:77659483-77659502 | MS.gene38049:CDS | 40.0% | |
| AACTTGTGGCAATCTATTGG+GGG | - | chr5.1:77655537-77655556 | None:intergenic | 40.0% | |
| ACCTTTCTTGGAGAAACTTG+CGG | + | chr5.1:77658571-77658590 | MS.gene38049:CDS | 40.0% | |
| ACTTCAGCCTCTATAGTTTC+TGG | - | chr5.1:77660072-77660091 | None:intergenic | 40.0% | |
| AGAAACTATAGAGGCTGAAG+TGG | + | chr5.1:77660071-77660090 | MS.gene38049:CDS | 40.0% | |
| AGAATGGCAAAATCTTGGGA+AGG | + | chr5.1:77655656-77655675 | MS.gene38049:intron | 40.0% | |
| AGCAAAAAACACTACCTCTG+TGG | - | chr5.1:77657498-77657517 | None:intergenic | 40.0% | |
| AGCCGCATAGTAAGTAGATA+GGG | + | chr5.1:77658003-77658022 | MS.gene38049:intron | 40.0% | |
| AGTTACTCAAGAAGTCAAGC+TGG | - | chr5.1:77657833-77657852 | None:intergenic | 40.0% | |
| ATACCTTAAGGTGCAGTGTA+AGG | - | chr5.1:77656678-77656697 | None:intergenic | 40.0% | |
| ATAGTAAGTAGATAGGGTGC+AGG | + | chr5.1:77658009-77658028 | MS.gene38049:intron | 40.0% | |
| ATAGTCCTACACACAGAACA+AGG | - | chr5.1:77658339-77658358 | None:intergenic | 40.0% | |
| ATCATCACACTTTACCACAG+AGG | + | chr5.1:77657481-77657500 | MS.gene38049:CDS | 40.0% | |
| ATTTCACGTGACACATTGAG+TGG | - | chr5.1:77657973-77657992 | None:intergenic | 40.0% | |
| ATTTGTCTCATTACAGGTGG+AGG | + | chr5.1:77657028-77657047 | MS.gene38049:intron | 40.0% | |
| CAAGACGTTTGTGATTCTCA+CGG | - | chr5.1:77658415-77658434 | None:intergenic | 40.0% | |
| CACCCTATCTACTTACTATG+CGG | - | chr5.1:77658008-77658027 | None:intergenic | 40.0% | |
| CAGCACACAAGATACATAAC+AGG | - | chr5.1:77656328-77656347 | None:intergenic | 40.0% | |
| CATAGGATCCAATTTCACAG+TGG | - | chr5.1:77659633-77659652 | None:intergenic | 40.0% | |
| CGAGAAAGATGAATACCGAA+TGG | - | chr5.1:77654352-77654371 | None:intergenic | 40.0% | |
| CTTCAGCCTCTATAGTTTCT+GGG | - | chr5.1:77660071-77660090 | None:intergenic | 40.0% | |
| CTTGGAACTATTGCTCAAAG+TGG | + | chr5.1:77656221-77656240 | MS.gene38049:CDS | 40.0% | |
| GAAAAGGAAAACCAGAACCA+AGG | - | chr5.1:77655388-77655407 | None:intergenic | 40.0% | |
| GAAATTTGAGTACCAAGCTG+AGG | + | chr5.1:77655091-77655110 | MS.gene38049:CDS | 40.0% | |
| GAACCTAGGATCCAATTTCA+CGG | - | chr5.1:77659611-77659630 | None:intergenic | 40.0% | |
| GAATGGCAAAATCTTGGGAA+GGG | + | chr5.1:77655657-77655676 | MS.gene38049:intron | 40.0% | |
| GATGAGTAAAACCGAAGCAA+CGG | - | chr5.1:77658440-77658459 | None:intergenic | 40.0% | |
| GTAAATGGATCACATGCTAG+TGG | + | chr5.1:77659856-77659875 | MS.gene38049:intron | 40.0% | |
| GTACTTCTCAACAACAGTCT+TGG | - | chr5.1:77657247-77657266 | None:intergenic | 40.0% | |
| GTGGATTTACGGTAAGCTAT+TGG | + | chr5.1:77659551-77659570 | MS.gene38049:intron | 40.0% | |
| TAACGAATACTTGGAGCCAT+TGG | + | chr5.1:77657457-77657476 | MS.gene38049:CDS | 40.0% | |
| TACAGAGCCTGATCTAATGA+AGG | + | chr5.1:77656016-77656035 | MS.gene38049:CDS | 40.0% | |
| TACTCAAATTTCTCAGCTGG+TGG | - | chr5.1:77655083-77655102 | None:intergenic | 40.0% | |
| TAGCTCATATACCATAGCTG+AGG | + | chr5.1:77656615-77656634 | MS.gene38049:CDS | 40.0% | |
| TCAAACACTTCTGATGGAAG+AGG | + | chr5.1:77654703-77654722 | MS.gene38049:intron | 40.0% | |
| TCCTGATAATAGAGTGGTCA+GGG | - | chr5.1:77659347-77659366 | None:intergenic | 40.0% | |
| TGACATTAGCAAGGAAGACT+TGG | + | chr5.1:77658777-77658796 | MS.gene38049:CDS | 40.0% | |
| TGACTATGTCGGTACATCAT+AGG | - | chr5.1:77659650-77659669 | None:intergenic | 40.0% | |
| TGCAAAGAACACACCTTTCT+TGG | + | chr5.1:77658559-77658578 | MS.gene38049:CDS | 40.0% | |
| TGCGTGCTTAAAGTGGAAAT+TGG | + | chr5.1:77657334-77657353 | MS.gene38049:intron | 40.0% | |
| TGCTTCTATGTTGTGCATGA+AGG | + | chr5.1:77658108-77658127 | MS.gene38049:intron | 40.0% | |
| TGGATTGCAACCTCATCTAT+TGG | - | chr5.1:77658724-77658743 | None:intergenic | 40.0% | |
| TGGTACTCAAATTTCTCAGC+TGG | - | chr5.1:77655086-77655105 | None:intergenic | 40.0% | |
| TTAAGAGCTTACCTTGGTTC+TGG | + | chr5.1:77655374-77655393 | MS.gene38049:intron | 40.0% | |
| TTACCTCAGTCTTCTCATCT+TGG | - | chr5.1:77657088-77657107 | None:intergenic | 40.0% | |
| TTATGCAGTGATACAGGCAT+TGG | + | chr5.1:77656170-77656189 | MS.gene38049:intron | 40.0% | |
| TTCATCTGCTTACTCCCATT+CGG | + | chr5.1:77654334-77654353 | MS.gene38049:CDS | 40.0% | |
| TTCATGAATTCCATGCTAGC+GGG | - | chr5.1:77659300-77659319 | None:intergenic | 40.0% | |
| TTCCTGATAATAGAGTGGTC+AGG | - | chr5.1:77659348-77659367 | None:intergenic | 40.0% | |
| TTTGAACGCTAATGTGTTGG+TGG | + | chr5.1:77657626-77657645 | MS.gene38049:intron | 40.0% | |
| ! | AACCAAATTTTCCTGACACC+AGG | - | chr5.1:77659125-77659144 | None:intergenic | 40.0% |
| ! | ACACCTTCAATCAGAAGTGT+TGG | + | chr5.1:77654601-77654620 | MS.gene38049:intron | 40.0% |
| ! | AGACTGTTGTTGAGAAGTAC+TGG | + | chr5.1:77657247-77657266 | MS.gene38049:CDS | 40.0% |
| ! | AGTTTAGCTCGACAATTGAC+TGG | + | chr5.1:77659028-77659047 | MS.gene38049:CDS | 40.0% |
| ! | ATCCCTCTGAAAACAAGTCA+AGG | - | chr5.1:77656784-77656803 | None:intergenic | 40.0% |
| ! | GCTAATGAAGGCACAAACTA+TGG | + | chr5.1:77659269-77659288 | MS.gene38049:CDS | 40.0% |
| ! | GCTGATCGGGTATGTATTTT+TGG | + | chr5.1:77656445-77656464 | MS.gene38049:intron | 40.0% |
| ! | GTAAAGTGTGATGATGCCAA+TGG | - | chr5.1:77657476-77657495 | None:intergenic | 40.0% |
| ! | TCTTTTGTACGATGCAGCTT+TGG | + | chr5.1:77659522-77659541 | MS.gene38049:CDS | 40.0% |
| ! | TGAGCGGACTCAAAATGATT+AGG | - | chr5.1:77660033-77660052 | None:intergenic | 40.0% |
| ! | TGGTGTCAGGAAAATTTGGT+TGG | + | chr5.1:77659124-77659143 | MS.gene38049:CDS | 40.0% |
| ! | TGTTTTCAGAGGGATGACAA+AGG | + | chr5.1:77656789-77656808 | MS.gene38049:intron | 40.0% |
| ! | TTTAGGTTCCACCGTGAAAT+TGG | + | chr5.1:77659597-77659616 | MS.gene38049:intron | 40.0% |
| ! | TTTGGTGGATCCAATAGATG+AGG | + | chr5.1:77658711-77658730 | MS.gene38049:CDS | 40.0% |
| !! | AATCAGAAGTGTTGGTGCTA+TGG | + | chr5.1:77654609-77654628 | MS.gene38049:intron | 40.0% |
| !! | CTTGAGTTTTGTCAAAGGTG+TGG | + | chr5.1:77657930-77657949 | MS.gene38049:CDS | 40.0% |
| !! | GACTGTTGTTGAGAAGTACT+GGG | + | chr5.1:77657248-77657267 | MS.gene38049:CDS | 40.0% |
| !! | GATATACGAGATGATGGGTA+TGG | + | chr5.1:77659984-77660003 | MS.gene38049:CDS | 40.0% |
| !! | GGTGCTGACAACAACTTAAT+TGG | + | chr5.1:77656385-77656404 | MS.gene38049:CDS | 40.0% |
| !! | GTAACAAGGAAGTGTTTCTC+AGG | + | chr5.1:77655233-77655252 | MS.gene38049:CDS | 40.0% |
| !! | TGTTGAGAAGTACTGGGATT+GGG | + | chr5.1:77657254-77657273 | MS.gene38049:CDS | 40.0% |
| !! | TTGTTGAGAAGTACTGGGAT+TGG | + | chr5.1:77657253-77657272 | MS.gene38049:CDS | 40.0% |
| !!! | CGAAATTTTGAGGTGTAGCT+TGG | - | chr5.1:77655873-77655892 | None:intergenic | 40.0% |
| !!! | CTGCTTTTCTAGTTGCTGAT+CGG | + | chr5.1:77656431-77656450 | MS.gene38049:CDS | 40.0% |
| !!! | GTCCTTGACTTGTTTTCAGA+GGG | + | chr5.1:77656779-77656798 | MS.gene38049:intron | 40.0% |
| !!! | TGCTTTTCTAGTTGCTGATC+GGG | + | chr5.1:77656432-77656451 | MS.gene38049:CDS | 40.0% |
| !!! | TGTCCTTGACTTGTTTTCAG+AGG | + | chr5.1:77656778-77656797 | MS.gene38049:intron | 40.0% |
| ACAAGCTTCTCAATCCTCTC+TGG | - | chr5.1:77656825-77656844 | None:intergenic | 45.0% | |
| ACCCTGACCACTCTATTATC+AGG | + | chr5.1:77659343-77659362 | MS.gene38049:CDS | 45.0% | |
| AGATGACTTCGATGGAGAAC+TGG | + | chr5.1:77657789-77657808 | MS.gene38049:CDS | 45.0% | |
| AGCAAGGAAGACTTGGATCT+AGG | + | chr5.1:77658784-77658803 | MS.gene38049:CDS | 45.0% | |
| ATTACGTCATCCTTCCCAGA+TGG | - | chr5.1:77657718-77657737 | None:intergenic | 45.0% | |
| CAAAAACCGCAGCTTATCCA+AGG | - | chr5.1:77655991-77656010 | None:intergenic | 45.0% | |
| CAAATGAGACCCAACCTATC+TGG | + | chr5.1:77657283-77657302 | MS.gene38049:CDS | 45.0% | |
| CAACCAAGATGAGAAGACTG+AGG | + | chr5.1:77657082-77657101 | MS.gene38049:CDS | 45.0% | |
| CAATCTATTGGGGGAAACCA+AGG | - | chr5.1:77655528-77655547 | None:intergenic | 45.0% | |
| CAGGAACTAGTTGACTGTCT+TGG | + | chr5.1:77656203-77656222 | MS.gene38049:CDS | 45.0% | |
| CAGTAATGCTAGTGATGCCT+TGG | + | chr5.1:77655971-77655990 | MS.gene38049:intron | 45.0% | |
| CATGAATACATGCCGCTGTA+CGG | - | chr5.1:77658926-77658945 | None:intergenic | 45.0% | |
| CCAATTTCACAGTGGAACCT+AGG | - | chr5.1:77659625-77659644 | None:intergenic | 45.0% | |
| CCATGTCCCAGAAACTATAG+AGG | + | chr5.1:77660062-77660081 | MS.gene38049:CDS | 45.0% | |
| CCTAGGTTCCACTGTGAAAT+TGG | + | chr5.1:77659622-77659641 | MS.gene38049:intron | 45.0% | |
| CCTCTTGGAATCAACTTCTC+AGG | - | chr5.1:77656649-77656668 | None:intergenic | 45.0% | |
| CTATGTTGTGCATGAAGGTG+CGG | + | chr5.1:77658113-77658132 | MS.gene38049:intron | 45.0% | |
| CTGATGTGTGTGTCAGACAT+TGG | + | chr5.1:77654576-77654595 | MS.gene38049:intron | 45.0% | |
| CTTCGATGGAGAACTGGTAT+AGG | + | chr5.1:77657795-77657814 | MS.gene38049:intron | 45.0% | |
| GACATGGTACTGTGTTTGAG+CGG | - | chr5.1:77660049-77660068 | None:intergenic | 45.0% | |
| GACCACACACATACGAAAGA+CGG | - | chr5.1:77655122-77655141 | None:intergenic | 45.0% | |
| GAGCCGCATAGTAAGTAGAT+AGG | + | chr5.1:77658002-77658021 | MS.gene38049:intron | 45.0% | |
| GCAATATGTTTGGGAAGGAG+AGG | + | chr5.1:77656585-77656604 | MS.gene38049:CDS | 45.0% | |
| GCACCAACACTTCTGATTGA+AGG | - | chr5.1:77654607-77654626 | None:intergenic | 45.0% | |
| TATCCAACCCGTGTTAGTGT+GGG | - | chr5.1:77659750-77659769 | None:intergenic | 45.0% | |
| TCCGCAAGTTTCTCCAAGAA+AGG | - | chr5.1:77658575-77658594 | None:intergenic | 45.0% | |
| TCTTGTAGAGAGAGAGAGAG+AGG | - | chr5.1:77655591-77655610 | None:intergenic | 45.0% | |
| TGCAGGGTGAGGTAGAATTT+AGG | + | chr5.1:77657665-77657684 | MS.gene38049:intron | 45.0% | |
| TGCATGATGCGTGCTTAAAG+TGG | + | chr5.1:77657327-77657346 | MS.gene38049:intron | 45.0% | |
| TGGGAGTAAGCAGATGAAAG+TGG | - | chr5.1:77654332-77654351 | None:intergenic | 45.0% | |
| TTAAGCACGCATCATGCAGT+TGG | - | chr5.1:77657325-77657344 | None:intergenic | 45.0% | |
| ! | AAGGTTTTGCTCATCCAGAG+AGG | + | chr5.1:77656808-77656827 | MS.gene38049:CDS | 45.0% |
| ! | CAATAGGATAGTAAGGGTGC+TGG | + | chr5.1:77656364-77656383 | MS.gene38049:intron | 45.0% |
| ! | CCTGAGAAGTTGATTCCAAG+AGG | + | chr5.1:77656646-77656665 | MS.gene38049:CDS | 45.0% |
| ! | GATGCAGCTTTGGTTTCAAG+TGG | + | chr5.1:77659532-77659551 | MS.gene38049:CDS | 45.0% |
| ! | GTATGGCTCTTGGTGGTAAA+TGG | + | chr5.1:77660001-77660020 | MS.gene38049:CDS | 45.0% |
| ! | GTCCTGGTGTCAGGAAAATT+TGG | + | chr5.1:77659120-77659139 | MS.gene38049:CDS | 45.0% |
| ! | TGTATCTTGTGTGCTGACGA+AGG | + | chr5.1:77656332-77656351 | MS.gene38049:intron | 45.0% |
| !! | AGGCATTGGTATGACTAAGC+AGG | + | chr5.1:77656184-77656203 | MS.gene38049:CDS | 45.0% |
| !! | ATTACAGGTGGAGGTTGATG+AGG | + | chr5.1:77657037-77657056 | MS.gene38049:intron | 45.0% |
| !! | ATTTGGTTGGTCTGCGAACA+TGG | + | chr5.1:77659137-77659156 | MS.gene38049:CDS | 45.0% |
| !! | CCTCTATAGTTTCTGGGACA+TGG | - | chr5.1:77660065-77660084 | None:intergenic | 45.0% |
| !! | CTTCTGATGGAAGAGGTGTT+TGG | + | chr5.1:77654710-77654729 | MS.gene38049:intron | 45.0% |
| !! | TTTTGATTGCCAGCCTCAGT+AGG | - | chr5.1:77660102-77660121 | None:intergenic | 45.0% |
| AACGTCTTGCTCCGTTGCTT+CGG | + | chr5.1:77658426-77658445 | MS.gene38049:CDS | 50.0% | |
| AAGACGGCAATACCTCAGCT+TGG | - | chr5.1:77655106-77655125 | None:intergenic | 50.0% | |
| AGGATCTGTCTCCTCAGCTA+TGG | - | chr5.1:77656629-77656648 | None:intergenic | 50.0% | |
| AGGTGCGGATCATGAGGAAA+CGG | + | chr5.1:77658128-77658147 | MS.gene38049:intron | 50.0% | |
| AGTGTAAGGCGAGTTCCTCT+TGG | - | chr5.1:77656664-77656683 | None:intergenic | 50.0% | |
| ATCCATGAGCGACAACAGAG+AGG | + | chr5.1:77658186-77658205 | MS.gene38049:CDS | 50.0% | |
| ATCTTTCCTCCAAGCTGTGC+TGG | - | chr5.1:77659967-77659986 | None:intergenic | 50.0% | |
| ATTCCCTGGCCCTTGAAAAC+TGG | + | chr5.1:77656974-77656993 | MS.gene38049:intron | 50.0% | |
| CACGTGACACATTGAGTGGA+AGG | - | chr5.1:77657969-77657988 | None:intergenic | 50.0% | |
| CCAAGCTGTGCTGGATTATC+AGG | - | chr5.1:77659958-77659977 | None:intergenic | 50.0% | |
| CCACCGTGAAATTGGATCCT+AGG | + | chr5.1:77659605-77659624 | MS.gene38049:intron | 50.0% | |
| CCTAGGATCCAATTTCACGG+TGG | - | chr5.1:77659608-77659627 | None:intergenic | 50.0% | |
| CCTGATAATCCAGCACAGCT+TGG | + | chr5.1:77659955-77659974 | MS.gene38049:CDS | 50.0% | |
| CGTACAGCGGCATGTATTCA+TGG | + | chr5.1:77658924-77658943 | MS.gene38049:intron | 50.0% | |
| CTTGGAGAAACTTGCGGAGA+AGG | + | chr5.1:77658577-77658596 | MS.gene38049:CDS | 50.0% | |
| GAGGTGTAGCTTGGTCACAA+GGG | - | chr5.1:77655864-77655883 | None:intergenic | 50.0% | |
| GATAATCCAGCACAGCTTGG+AGG | + | chr5.1:77659958-77659977 | MS.gene38049:CDS | 50.0% | |
| GTATCCAACCCGTGTTAGTG+TGG | - | chr5.1:77659751-77659770 | None:intergenic | 50.0% | |
| GTCAGTGTCCCACACTAACA+CGG | + | chr5.1:77659739-77659758 | MS.gene38049:intron | 50.0% | |
| GTGATGCCTTGGATAAGCTG+CGG | + | chr5.1:77655982-77656001 | MS.gene38049:CDS | 50.0% | |
| TACACACAGAACAAGGCAGC+TGG | - | chr5.1:77658332-77658351 | None:intergenic | 50.0% | |
| TACCTCTCTGTTGTCGCTCA+TGG | - | chr5.1:77658191-77658210 | None:intergenic | 50.0% | |
| TCAGTGTCCCACACTAACAC+GGG | + | chr5.1:77659740-77659759 | MS.gene38049:intron | 50.0% | |
| TCGCCTTACACTGCACCTTA+AGG | + | chr5.1:77656672-77656691 | MS.gene38049:CDS | 50.0% | |
| TGAGGTGTAGCTTGGTCACA+AGG | - | chr5.1:77655865-77655884 | None:intergenic | 50.0% | |
| TGCCGTCTTTCGTATGTGTG+TGG | + | chr5.1:77655117-77655136 | MS.gene38049:intron | 50.0% | |
| TTGCTGCTGCAGGCTAATGA+AGG | + | chr5.1:77659257-77659276 | MS.gene38049:intron | 50.0% | |
| TTTCCTGACACCAGGACACA+AGG | - | chr5.1:77659117-77659136 | None:intergenic | 50.0% | |
| TTTGCCAGTATGCCGTACAG+CGG | + | chr5.1:77658911-77658930 | MS.gene38049:intron | 50.0% | |
| ! | AGCTGCCTTGTTCTGTGTGT+AGG | + | chr5.1:77658331-77658350 | MS.gene38049:intron | 50.0% |
| ! | GAGGAAACGGTTGGTCAGAA+AGG | + | chr5.1:77658141-77658160 | MS.gene38049:CDS | 50.0% |
| ! | GTTGGTCTGCGAACATGGAA+AGG | + | chr5.1:77659142-77659161 | MS.gene38049:CDS | 50.0% |
| !! | AATGTGTTGGTGGCACTTGG+TGG | + | chr5.1:77657636-77657655 | MS.gene38049:intron | 50.0% |
| !! | ATGATGGGTATGGCTCTTGG+TGG | + | chr5.1:77659994-77660013 | MS.gene38049:CDS | 50.0% |
| !! | CACTTGGTGGTGATGTTGCA+GGG | + | chr5.1:77657649-77657668 | MS.gene38049:intron | 50.0% |
| !! | GAGATGATGGGTATGGCTCT+TGG | + | chr5.1:77659991-77660010 | MS.gene38049:CDS | 50.0% |
| !! | GCTAATGTGTTGGTGGCACT+TGG | + | chr5.1:77657633-77657652 | MS.gene38049:intron | 50.0% |
| !! | GGAAGAGGTGTTTGGTGTCA+GGG | + | chr5.1:77654718-77654737 | MS.gene38049:intron | 50.0% |
| !! | TGGAAGAGGTGTTTGGTGTC+AGG | + | chr5.1:77654717-77654736 | MS.gene38049:intron | 50.0% |
| !! | TTGTCCTTTTTCGCCTCAGC+TGG | - | chr5.1:77657065-77657084 | None:intergenic | 50.0% |
| !! | TTTGGTGTCAGGGTCGTGTT+TGG | + | chr5.1:77654728-77654747 | MS.gene38049:intron | 50.0% |
| ATCCTTCCCAGATGGAGCGT+AGG | - | chr5.1:77657710-77657729 | None:intergenic | 55.0% | |
| CTTAGGGCCTCTTGATCGTC+AGG | - | chr5.1:77659493-77659512 | None:intergenic | 55.0% | |
| GCGGATCATGAGGAAACGGT+TGG | + | chr5.1:77658132-77658151 | MS.gene38049:CDS | 55.0% | |
| GGATCCAGCTGAGGCGAAAA+AGG | + | chr5.1:77657058-77657077 | MS.gene38049:CDS | 55.0% | |
| TATGGGTGATCCCGCTAGCA+TGG | + | chr5.1:77659287-77659306 | MS.gene38049:CDS | 55.0% | |
| TGAAGTGGTCGAGCCTACTG+AGG | + | chr5.1:77660086-77660105 | MS.gene38049:CDS | 55.0% | |
| TGTCCCACACTAACACGGGT+TGG | + | chr5.1:77659744-77659763 | MS.gene38049:intron | 55.0% | |
| TTCCTGCCTACGCTCCATCT+GGG | + | chr5.1:77657701-77657720 | MS.gene38049:CDS | 55.0% | |
| ! | GCATGAAGGTGCGGATCATG+AGG | + | chr5.1:77658122-77658141 | MS.gene38049:intron | 55.0% |
| ! | TTGGCAGGTTAGTCGGCTCA+TGG | + | chr5.1:77655186-77655205 | MS.gene38049:intron | 55.0% |
| !! | ACGTCCAGTTTTCAAGGGCC+AGG | - | chr5.1:77656981-77657000 | None:intergenic | 55.0% |
| !! | CGTCCAGTTTTCAAGGGCCA+GGG | - | chr5.1:77656980-77656999 | None:intergenic | 55.0% |
| !! | GCACTTGGTGGTGATGTTGC+AGG | + | chr5.1:77657648-77657667 | MS.gene38049:intron | 55.0% |
| !! | GGTTGATGAGGATCCAGCTG+AGG | + | chr5.1:77657049-77657068 | MS.gene38049:CDS | 55.0% |
| CATGCCGCTGTACGGCATAC+TGG | - | chr5.1:77658918-77658937 | None:intergenic | 60.0% | |
| GAGCTCTTCGCCTTGTGTCC+TGG | + | chr5.1:77659104-77659123 | MS.gene38049:CDS | 60.0% | |
| GTCTCCGCCCTTCTCCGTTA+CGG | + | chr5.1:77654275-77654294 | MS.gene38049:CDS | 60.0% | |
| GTTCCTGCCTACGCTCCATC+TGG | + | chr5.1:77657700-77657719 | MS.gene38049:CDS | 60.0% | |
| TCGCCTTGTGTCCTGGTGTC+AGG | + | chr5.1:77659111-77659130 | MS.gene38049:CDS | 60.0% | |
| TGCCTACGCTCCATCTGGGA+AGG | + | chr5.1:77657705-77657724 | MS.gene38049:CDS | 60.0% | |
| TTCCCAGATGGAGCGTAGGC+AGG | - | chr5.1:77657706-77657725 | None:intergenic | 60.0% | |
| ! | GGTGGTGATGTTGCAGGGTG+AGG | + | chr5.1:77657654-77657673 | MS.gene38049:intron | 60.0% |
| ! | GTAACGGAGAAGGGCGGAGA+CGG | - | chr5.1:77654276-77654295 | None:intergenic | 60.0% |
| !! | GGAGACGGAGGAAGAGCGTT+TGG | - | chr5.1:77654261-77654280 | None:intergenic | 60.0% |
| GTGGTCGAGCCTACTGAGGC+TGG | + | chr5.1:77660090-77660109 | MS.gene38049:CDS | 65.0% | |
| TCCGCCCTTCTCCGTTACGG+CGG | + | chr5.1:77654278-77654297 | MS.gene38049:CDS | 65.0% | |
| ! | TGCGCCGCCGTAACGGAGAA+GGG | - | chr5.1:77654285-77654304 | None:intergenic | 65.0% |
| ACGGAGAAGGGCGGAGACGG+AGG | - | chr5.1:77654273-77654292 | None:intergenic | 70.0% | |
| CGCGAAGTGCGCCGCCGTAA+CGG | - | chr5.1:77654292-77654311 | None:intergenic | 70.0% | |
| ! | GCCGCCGTAACGGAGAAGGG+CGG | - | chr5.1:77654282-77654301 | None:intergenic | 70.0% |
| ! | GTGCGCCGCCGTAACGGAGA+AGG | - | chr5.1:77654286-77654305 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 77654245 | 77660125 | 77654245 | ID=MS.gene38049 |
| chr5.1 | mRNA | 77654245 | 77660125 | 77654245 | ID=MS.gene38049.t1;Parent=MS.gene38049 |
| chr5.1 | exon | 77654245 | 77654355 | 77654245 | ID=MS.gene38049.t1.exon1;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77654245 | 77654355 | 77654245 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77654933 | 77655112 | 77654933 | ID=MS.gene38049.t1.exon2;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77654933 | 77655112 | 77654933 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77655193 | 77655266 | 77655193 | ID=MS.gene38049.t1.exon3;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77655193 | 77655266 | 77655193 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77655974 | 77656099 | 77655974 | ID=MS.gene38049.t1.exon4;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77655974 | 77656099 | 77655974 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77656178 | 77656271 | 77656178 | ID=MS.gene38049.t1.exon5;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77656178 | 77656271 | 77656178 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77656370 | 77656453 | 77656370 | ID=MS.gene38049.t1.exon6;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77656370 | 77656453 | 77656370 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77656550 | 77656693 | 77656550 | ID=MS.gene38049.t1.exon7;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77656550 | 77656693 | 77656550 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77656798 | 77656911 | 77656798 | ID=MS.gene38049.t1.exon8;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77656798 | 77656911 | 77656798 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77657044 | 77657103 | 77657044 | ID=MS.gene38049.t1.exon9;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77657044 | 77657103 | 77657044 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77657231 | 77657305 | 77657231 | ID=MS.gene38049.t1.exon10;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77657231 | 77657305 | 77657231 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77657398 | 77657502 | 77657398 | ID=MS.gene38049.t1.exon11;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77657398 | 77657502 | 77657398 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77657670 | 77657810 | 77657670 | ID=MS.gene38049.t1.exon12;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77657670 | 77657810 | 77657670 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77657919 | 77658011 | 77657919 | ID=MS.gene38049.t1.exon13;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77657919 | 77658011 | 77657919 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77658130 | 77658207 | 77658130 | ID=MS.gene38049.t1.exon14;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77658130 | 77658207 | 77658130 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77658353 | 77658607 | 77658353 | ID=MS.gene38049.t1.exon15;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77658353 | 77658607 | 77658353 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77658703 | 77658805 | 77658703 | ID=MS.gene38049.t1.exon16;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77658703 | 77658805 | 77658703 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77658989 | 77659163 | 77658989 | ID=MS.gene38049.t1.exon17;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77658989 | 77659163 | 77658989 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77659269 | 77659374 | 77659269 | ID=MS.gene38049.t1.exon18;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77659269 | 77659374 | 77659269 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77659472 | 77659561 | 77659472 | ID=MS.gene38049.t1.exon19;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77659472 | 77659561 | 77659472 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| chr5.1 | exon | 77659955 | 77660125 | 77659955 | ID=MS.gene38049.t1.exon20;Parent=MS.gene38049.t1 |
| chr5.1 | CDS | 77659955 | 77660125 | 77659955 | ID=cds.MS.gene38049.t1;Parent=MS.gene38049.t1 |
| Gene Sequence |
| Protein sequence |
