Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38210.t1 | XP_003617951.1 | 98.5 | 792 | 12 | 0 | 1 | 792 | 1 | 792 | 0.00E+00 | 1508.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38210.t1 | F4JFN3 | 76.8 | 801 | 175 | 5 | 1 | 792 | 1 | 799 | 0.0e+00 | 1165.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38210.t1 | G7KEN6 | 98.5 | 792 | 12 | 0 | 1 | 792 | 1 | 792 | 0.0e+00 | 1508.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38210 | MS.gene64225 | PPI |
| MS.gene38210 | MS.gene62607 | PPI |
| MS.gene24136 | MS.gene38210 | PPI |
| MS.gene37988 | MS.gene38210 | PPI |
| MS.gene37989 | MS.gene38210 | PPI |
| MS.gene029690 | MS.gene38210 | PPI |
| MS.gene38210 | MS.gene020834 | PPI |
| MS.gene38210 | MS.gene60613 | PPI |
| MS.gene38210 | MS.gene38262 | PPI |
| MS.gene38210 | MS.gene061126 | PPI |
| MS.gene38210 | MS.gene38261 | PPI |
| MS.gene38210 | MS.gene49154 | PPI |
| MS.gene38210 | MS.gene006231 | PPI |
| MS.gene020833 | MS.gene38210 | PPI |
| MS.gene38210 | MS.gene75388 | PPI |
| MS.gene38210 | MS.gene62123 | PPI |
| MS.gene81285 | MS.gene38210 | PPI |
| MS.gene38210 | MS.gene64023 | PPI |
| MS.gene58998 | MS.gene38210 | PPI |
| MS.gene81288 | MS.gene38210 | PPI |
| MS.gene38210 | MS.gene64024 | PPI |
| MS.gene38210 | MS.gene30654 | PPI |
| MS.gene38210 | MS.gene040499 | PPI |
| MS.gene38210 | MS.gene27084 | PPI |
| MS.gene38210 | MS.gene75389 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38210.t1 | MTR_5g097320 | 98.737 | 792 | 10 | 0 | 1 | 792 | 1 | 792 | 0.0 | 1615 |
| MS.gene38210.t1 | MTR_0009s0390 | 70.270 | 703 | 204 | 3 | 89 | 788 | 81 | 781 | 0.0 | 1004 |
| MS.gene38210.t1 | MTR_1g025430 | 46.208 | 712 | 323 | 15 | 89 | 755 | 77 | 773 | 0.0 | 600 |
| MS.gene38210.t1 | MTR_6g452990 | 47.041 | 676 | 338 | 9 | 89 | 755 | 4 | 668 | 0.0 | 588 |
| MS.gene38210.t1 | MTR_1g099840 | 45.914 | 673 | 335 | 9 | 89 | 755 | 9 | 658 | 0.0 | 564 |
| MS.gene38210.t1 | MTR_5g096430 | 45.414 | 676 | 346 | 10 | 90 | 755 | 5 | 667 | 0.0 | 560 |
| MS.gene38210.t1 | MTR_5g096460 | 45.414 | 676 | 346 | 10 | 90 | 755 | 5 | 667 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38210.t1 | AT3G07770 | 78.333 | 780 | 160 | 5 | 1 | 773 | 1 | 778 | 0.0 | 1211 |
| MS.gene38210.t1 | AT3G07770 | 78.333 | 780 | 160 | 5 | 1 | 773 | 1 | 778 | 0.0 | 1211 |
| MS.gene38210.t1 | AT3G07770 | 78.333 | 780 | 160 | 5 | 1 | 773 | 1 | 778 | 0.0 | 1211 |
| MS.gene38210.t1 | AT2G04030 | 68.521 | 737 | 223 | 4 | 55 | 788 | 41 | 771 | 0.0 | 1018 |
| MS.gene38210.t1 | AT2G04030 | 68.250 | 737 | 222 | 5 | 55 | 788 | 41 | 768 | 0.0 | 1009 |
| MS.gene38210.t1 | AT4G24190 | 45.582 | 713 | 340 | 12 | 81 | 755 | 68 | 770 | 0.0 | 576 |
| MS.gene38210.t1 | AT4G24190 | 45.582 | 713 | 340 | 12 | 81 | 755 | 68 | 770 | 0.0 | 575 |
| MS.gene38210.t1 | AT5G52640 | 46.233 | 677 | 343 | 9 | 89 | 755 | 4 | 669 | 0.0 | 565 |
| MS.gene38210.t1 | AT5G56030 | 45.347 | 677 | 347 | 10 | 89 | 755 | 4 | 667 | 0.0 | 558 |
| MS.gene38210.t1 | AT5G56000 | 45.347 | 677 | 347 | 10 | 89 | 755 | 4 | 667 | 0.0 | 558 |
| MS.gene38210.t1 | AT5G56010 | 45.347 | 677 | 347 | 10 | 89 | 755 | 4 | 667 | 0.0 | 558 |
| MS.gene38210.t1 | AT5G56030 | 43.484 | 706 | 347 | 11 | 89 | 755 | 4 | 696 | 0.0 | 543 |
Find 182 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGGCAAACACTTGAAAT+TGG | 0.131640 | 5.3:+78637361 | MS.gene38210:CDS |
| CCACTCTATTATCAGGAATT+TGG | 0.164620 | 5.3:+78638328 | MS.gene38210:CDS |
| CACATGAAGTCTTATATTCT+TGG | 0.170508 | 5.3:-78636733 | None:intergenic |
| AACAACTTAATTGGTCAATT+TGG | 0.187122 | 5.3:+78635396 | MS.gene38210:CDS |
| ACAATAGATCAATCGCTCTT+AGG | 0.222613 | 5.3:-78638485 | None:intergenic |
| TGCAAAGAACACACCTTTCT+TGG | 0.234178 | 5.3:+78637544 | MS.gene38210:CDS |
| TGTTTCTCAGGGAACTTATT+AGG | 0.248250 | 5.3:+78634214 | MS.gene38210:CDS |
| ATTCAATCTGATAAAGATAA+TGG | 0.255102 | 5.3:+78635064 | MS.gene38210:CDS |
| ACTTCAGCCTCTACAGTTTC+TGG | 0.257108 | 5.3:-78639026 | None:intergenic |
| CAAATGAGACCCAACCTATA+TGG | 0.265882 | 5.3:+78636267 | MS.gene38210:CDS |
| GCTAATGAAGGCACAAACTA+TGG | 0.276666 | 5.3:+78638247 | MS.gene38210:CDS |
| CCAAGCTGTGCTGGATTATC+AGG | 0.281050 | 5.3:-78638912 | None:intergenic |
| TCCTCTTTAGTGACTTCTTT+AGG | 0.283016 | 5.3:-78636391 | None:intergenic |
| TGGATTGCAACCTCATCTAT+TGG | 0.284889 | 5.3:-78637702 | None:intergenic |
| GGTGCTGACAACAACTTAAT+TGG | 0.303646 | 5.3:+78635387 | MS.gene38210:CDS |
| TTCCCAAACATATTGCTTAT+CGG | 0.305484 | 5.3:-78635580 | None:intergenic |
| GTCCTGGTGTCAGGAAAATT+TGG | 0.316123 | 5.3:+78638098 | MS.gene38210:CDS |
| GTTCCTGCCTACGCTCCATC+TGG | 0.323157 | 5.3:+78636684 | MS.gene38210:CDS |
| TTGACAAAACTCAAGTATCT+TGG | 0.328697 | 5.3:-78636907 | None:intergenic |
| AAGTCTTATATTCTTGGTCT+TGG | 0.338011 | 5.3:-78636727 | None:intergenic |
| AACGTCTTGCTCCGTTGCTT+CGG | 0.343341 | 5.3:+78637411 | MS.gene38210:CDS |
| TTTGGTTTCAAGTGGATTTA+CGG | 0.346354 | 5.3:+78638518 | MS.gene38210:CDS |
| TATCTTTATCAGATTGAATT+CGG | 0.348716 | 5.3:-78635060 | None:intergenic |
| GGATCCAGCTGAGGCGAAAA+AGG | 0.350990 | 5.3:+78636062 | MS.gene38210:CDS |
| AGTGCATAGTCATACTTCTT+TGG | 0.352271 | 5.3:-78635906 | None:intergenic |
| GACTGGATTAAGAAACGTTT+GGG | 0.359599 | 5.3:+78638023 | MS.gene38210:CDS |
| ACATATTGCTTATCGGATCT+TGG | 0.360519 | 5.3:-78635573 | None:intergenic |
| GATCCGATAAGCAATATGTT+TGG | 0.367611 | 5.3:+78635577 | MS.gene38210:CDS |
| CAATAGATCAATCGCTCTTA+GGG | 0.368780 | 5.3:-78638484 | None:intergenic |
| TGTAGGACTATGAAAAGTTC+TGG | 0.370106 | 5.3:+78637333 | MS.gene38210:intron |
| GTATGGCTCTTGGTGGTAAA+TGG | 0.382991 | 5.3:+78638958 | MS.gene38210:CDS |
| TTTCATTCAATAGGATAGTA+AGG | 0.386928 | 5.3:+78635359 | MS.gene38210:intron |
| TGAGCGGACTCAAAATGATT+AGG | 0.388104 | 5.3:-78638987 | None:intergenic |
| TGCAGGGTGAGGTAGAATTT+AGG | 0.394366 | 5.3:+78636649 | MS.gene38210:intron |
| GTATTAAATTCTGAGAAATC+TGG | 0.394667 | 5.3:+78633938 | MS.gene38210:CDS |
| TTTGGCAAACACTTGAAATT+GGG | 0.396537 | 5.3:+78637362 | MS.gene38210:CDS |
| AATATACACTTGGCAGGAAA+AGG | 0.400859 | 5.3:+78635877 | MS.gene38210:CDS |
| TCGCCTTGTGTCCTGGTGTC+AGG | 0.401511 | 5.3:+78638089 | MS.gene38210:CDS |
| ATCTTTCCTCCAAGCTGTGC+TGG | 0.401912 | 5.3:-78638921 | None:intergenic |
| GAGCTCTTCGCCTTGTGTCC+TGG | 0.409189 | 5.3:+78638082 | MS.gene38210:CDS |
| AGTCTTATATTCTTGGTCTT+GGG | 0.413260 | 5.3:-78636726 | None:intergenic |
| ATCCGATAAGCAATATGTTT+GGG | 0.413273 | 5.3:+78635578 | MS.gene38210:CDS |
| ACCCTGACCACTCTATTATC+AGG | 0.413610 | 5.3:+78638321 | MS.gene38210:CDS |
| TTCATCTGCTTACTCCCATT+CGG | 0.414659 | 5.3:+78633317 | MS.gene38210:CDS |
| TTCAATCTGATAAAGATAAT+GGG | 0.415563 | 5.3:+78635065 | MS.gene38210:CDS |
| AGCAAGGAAGACTTGGATCT+AGG | 0.417696 | 5.3:+78637765 | MS.gene38210:CDS |
| AGACTGTTGTTGAGAAGTAC+TGG | 0.424364 | 5.3:+78636231 | MS.gene38210:CDS |
| TGACAAAACTCAAGTATCTT+GGG | 0.425510 | 5.3:-78636906 | None:intergenic |
| GAAAAGTTCTGGGATAACTT+TGG | 0.427899 | 5.3:+78637344 | MS.gene38210:CDS |
| CTTGGAGAAACTTGCGGAGA+AGG | 0.430733 | 5.3:+78637562 | MS.gene38210:CDS |
| CCTCTTGGAATCAACTTCTC+AGG | 0.431495 | 5.3:-78635648 | None:intergenic |
| GTAACAAGGAAGTGTTTCTC+AGG | 0.432748 | 5.3:+78634202 | MS.gene38210:CDS |
| ACAAGCTTCTCAATCCTCTC+TGG | 0.433027 | 5.3:-78635824 | None:intergenic |
| CTTAGGGCCTCTTGATCGTC+AGG | 0.435461 | 5.3:-78638468 | None:intergenic |
| TGACTGGATTAAGAAACGTT+TGG | 0.435632 | 5.3:+78638022 | MS.gene38210:CDS |
| TACCTCTCTGTTGTCGCTCA+TGG | 0.442910 | 5.3:-78637173 | None:intergenic |
| TCTATTGTACGATGCAGCTT+TGG | 0.443940 | 5.3:+78638500 | MS.gene38210:CDS |
| ATCATAAAACTAACCCATAT+AGG | 0.446543 | 5.3:-78636281 | None:intergenic |
| TTTAATACGGAGTACCATCT+TGG | 0.447727 | 5.3:-78633923 | None:intergenic |
| TTACCTCAGTCTTCTCATCT+TGG | 0.448970 | 5.3:-78636089 | None:intergenic |
| AGATGACTTCGATGGAGAAC+TGG | 0.450154 | 5.3:+78636773 | MS.gene38210:CDS |
| CTTCAGCCTCTACAGTTTCT+GGG | 0.452155 | 5.3:-78639025 | None:intergenic |
| ATATTGGAAATGAGACAAAC+TGG | 0.453616 | 5.3:-78635859 | None:intergenic |
| GAAAACATTTAACGAATACT+TGG | 0.455803 | 5.3:+78636432 | MS.gene38210:CDS |
| GGAGACGGAGGAAGAGCGTT+TGG | 0.457467 | 5.3:-78633241 | None:intergenic |
| TCCGCAAGTTTCTCCAAGAA+AGG | 0.458632 | 5.3:-78637557 | None:intergenic |
| TCGCCTTACACTGCACCTTA+AGG | 0.460271 | 5.3:+78635674 | MS.gene38210:CDS |
| GAACATGAAACCAGATCAAA+AGG | 0.465967 | 5.3:+78637487 | MS.gene38210:CDS |
| AGGAAAGATATACGAGATGA+TGG | 0.466450 | 5.3:+78638935 | MS.gene38210:CDS |
| TAACGAATACTTGGAGCCAT+TGG | 0.466806 | 5.3:+78636441 | MS.gene38210:CDS |
| TTATGCAGTGATACAGGCAT+TGG | 0.473198 | 5.3:+78635172 | MS.gene38210:intron |
| ATTTGGTTGGTCTGCGAACA+TGG | 0.475124 | 5.3:+78638115 | MS.gene38210:CDS |
| AAAGGAAAAGGAAATGAAGC+AGG | 0.476641 | 5.3:+78637983 | MS.gene38210:CDS |
| AAATGAGACCCAACCTATAT+GGG | 0.477242 | 5.3:+78636268 | MS.gene38210:CDS |
| AGATTTCTCAGAATTTAATA+CGG | 0.477390 | 5.3:-78633936 | None:intergenic |
| TTCCCAGATGGAGCGTAGGC+AGG | 0.477582 | 5.3:-78636687 | None:intergenic |
| TGACATTAGCAAGGAAGACT+TGG | 0.479175 | 5.3:+78637758 | MS.gene38210:CDS |
| TGGTACTCAAATTTCTCAGC+TGG | 0.482191 | 5.3:-78634052 | None:intergenic |
| TGATGAAGAGTTTATCAGCT+TGG | 0.484199 | 5.3:+78637451 | MS.gene38210:CDS |
| TAAGAATGAGGAAAAGGAAA+AGG | 0.486144 | 5.3:+78637971 | MS.gene38210:CDS |
| TTGGCAGGTTAGTCGGCTCA+TGG | 0.486833 | 5.3:+78634155 | MS.gene38210:intron |
| ATAGCATCCTTCATTAGATC+AGG | 0.486977 | 5.3:-78635025 | None:intergenic |
| CGTTACGGCGGCGCACTTCG+CGG | 0.488236 | 5.3:+78633273 | MS.gene38210:CDS |
| TAAAACTAACCCATATAGGT+TGG | 0.488484 | 5.3:-78636277 | None:intergenic |
| AGGTGATAAGAATGAGGAAA+AGG | 0.490165 | 5.3:+78637965 | MS.gene38210:intron |
| CGCGAAGTGCGCCGCCGTAA+CGG | 0.493116 | 5.3:-78633272 | None:intergenic |
| AGTTTAGCTCGACAATTGAC+TGG | 0.495708 | 5.3:+78638006 | MS.gene38210:CDS |
| ATTTCCAATATACACTTGGC+AGG | 0.502520 | 5.3:+78635871 | MS.gene38210:CDS |
| CAGGAACTAGTTGACTGTCT+TGG | 0.504084 | 5.3:+78635205 | MS.gene38210:CDS |
| CAGTAATGCAAGTGATGCCT+TGG | 0.506403 | 5.3:+78634973 | MS.gene38210:intron |
| TGTTGAGAAGTACTGGGATT+GGG | 0.509707 | 5.3:+78636238 | MS.gene38210:CDS |
| AAAACTAACCCATATAGGTT+GGG | 0.509927 | 5.3:-78636276 | None:intergenic |
| GTACTTCTCAACAACAGTCT+TGG | 0.510001 | 5.3:-78636228 | None:intergenic |
| ATACCTTAAGGTGCAGTGTA+AGG | 0.510410 | 5.3:-78635677 | None:intergenic |
| TTCATGAATTCCATGCTAGC+GGG | 0.511537 | 5.3:-78638275 | None:intergenic |
| GTGCGCCGCCGTAACGGAGA+AGG | 0.513297 | 5.3:-78633266 | None:intergenic |
| CTTAATTGGTCAATTTGGTG+TGG | 0.515790 | 5.3:+78635401 | MS.gene38210:CDS |
| TTCCTGATAATAGAGTGGTC+AGG | 0.516335 | 5.3:-78638323 | None:intergenic |
| GTGGTCGAGCCTACTGAGGC+TGG | 0.520167 | 5.3:+78639047 | MS.gene38210:CDS |
| CCAAAATATCAAAACATACA+AGG | 0.521596 | 5.3:+78637722 | MS.gene38210:CDS |
| ATATACACTTGGCAGGAAAA+GGG | 0.521867 | 5.3:+78635878 | MS.gene38210:CDS |
| GTCTCCGCCCTTCTCCGTTA+CGG | 0.522940 | 5.3:+78633258 | MS.gene38210:CDS |
| GTAGGACTATGAAAAGTTCT+GGG | 0.524059 | 5.3:+78637334 | MS.gene38210:intron |
| AGGATCTGTCTCCTCAGCTA+TGG | 0.525265 | 5.3:-78635628 | None:intergenic |
| TTAATTGGTCAATTTGGTGT+GGG | 0.529032 | 5.3:+78635402 | MS.gene38210:CDS |
| TATGGGTGATCCCGCTAGCA+TGG | 0.531370 | 5.3:+78638265 | MS.gene38210:CDS |
| TTCATTTCAGATGACTTCGA+TGG | 0.532439 | 5.3:+78636765 | MS.gene38210:CDS |
| CCTGATAATCCAGCACAGCT+TGG | 0.534512 | 5.3:+78638912 | MS.gene38210:CDS |
| GATAATCCAGCACAGCTTGG+AGG | 0.535534 | 5.3:+78638915 | MS.gene38210:CDS |
| TCCTAAAGAAGTCACTAAAG+AGG | 0.536099 | 5.3:+78636390 | MS.gene38210:CDS |
| TTCCTGCCTACGCTCCATCT+GGG | 0.540612 | 5.3:+78636685 | MS.gene38210:CDS |
| GAGATGATGGGTATGGCTCT+TGG | 0.541355 | 5.3:+78638948 | MS.gene38210:CDS |
| ACCTTTCTTGGAGAAACTTG+CGG | 0.546313 | 5.3:+78637556 | MS.gene38210:CDS |
| CAATAGGATAGTAAGGGTGC+TGG | 0.548567 | 5.3:+78635366 | MS.gene38210:intron |
| TTGCTGCTGCAGGCTAATGA+AGG | 0.548694 | 5.3:+78638235 | MS.gene38210:intron |
| TCCTGATAATAGAGTGGTCA+GGG | 0.548965 | 5.3:-78638322 | None:intergenic |
| GTAACGGAGAAGGGCGGAGA+CGG | 0.549045 | 5.3:-78633256 | None:intergenic |
| GAGGAAACGGTTGGTCAGAA+AGG | 0.550346 | 5.3:+78637126 | MS.gene38210:CDS |
| GATATACGAGATGATGGGTA+TGG | 0.558270 | 5.3:+78638941 | MS.gene38210:CDS |
| AGTGTAAGGCGAGTTCCTCT+TGG | 0.558292 | 5.3:-78635663 | None:intergenic |
| CCTCTACAGTTTCTGGGACA+TGG | 0.565301 | 5.3:-78639019 | None:intergenic |
| GAGAAAGATGAATACCGAAT+GGG | 0.567401 | 5.3:-78633331 | None:intergenic |
| TGGTGTCAGGAAAATTTGGT+TGG | 0.568365 | 5.3:+78638102 | MS.gene38210:CDS |
| GATGCAGCTTTGGTTTCAAG+TGG | 0.569210 | 5.3:+78638510 | MS.gene38210:CDS |
| TGCGCCGCCGTAACGGAGAA+GGG | 0.569272 | 5.3:-78633265 | None:intergenic |
| GTTGGTCTGCGAACATGGAA+AGG | 0.569848 | 5.3:+78638120 | MS.gene38210:CDS |
| AACTAATCCTGACGATCAAG+AGG | 0.573204 | 5.3:+78638461 | MS.gene38210:CDS |
| ATTACGTCATCCTTCCCAGA+TGG | 0.574953 | 5.3:-78636699 | None:intergenic |
| CTAATGAAGGCACAAACTAT+GGG | 0.576380 | 5.3:+78638248 | MS.gene38210:CDS |
| TACAGAGCCTGATCTAATGA+AGG | 0.576601 | 5.3:+78635018 | MS.gene38210:CDS |
| TGGAATTCATGAAAAGCAGA+AGG | 0.576845 | 5.3:+78638285 | MS.gene38210:CDS |
| TGCCTACGCTCCATCTGGGA+AGG | 0.576861 | 5.3:+78636689 | MS.gene38210:CDS |
| CACGTGACACATTGAGTGGA+AGG | 0.579217 | 5.3:-78636951 | None:intergenic |
| TACTCAAATTTCTCAGCTGG+TGG | 0.579869 | 5.3:-78634049 | None:intergenic |
| TTGTTGAGAAGTACTGGGAT+TGG | 0.581708 | 5.3:+78636237 | MS.gene38210:CDS |
| TGGGAGTAAGCAGATGAAAG+TGG | 0.582193 | 5.3:-78633312 | None:intergenic |
| GCAATATGTTTGGGAAGGAG+AGG | 0.585310 | 5.3:+78635587 | MS.gene38210:CDS |
| TTTCCTGACACCAGGACACA+AGG | 0.586847 | 5.3:-78638092 | None:intergenic |
| TTTGGTGGATCCAATAGATG+AGG | 0.590144 | 5.3:+78637692 | MS.gene38210:CDS |
| AGGTGCGGATCATGAGGAAA+CGG | 0.590921 | 5.3:+78637113 | MS.gene38210:intron |
| AGGCATTGGTATGACTAAGC+AGG | 0.591667 | 5.3:+78635186 | MS.gene38210:CDS |
| ATTACAGGTGGAGGTTGATG+AGG | 0.592517 | 5.3:+78636041 | MS.gene38210:intron |
| TTCTGTAGGTGATAAGAATG+AGG | 0.593306 | 5.3:+78637959 | MS.gene38210:intron |
| GGAAAGATATACGAGATGAT+GGG | 0.595782 | 5.3:+78638936 | MS.gene38210:CDS |
| CTTGGAACTATTGCTCAAAG+TGG | 0.596448 | 5.3:+78635223 | MS.gene38210:CDS |
| TTTCATGAATTCCATGCTAG+CGG | 0.596609 | 5.3:-78638276 | None:intergenic |
| TCTCATTTCCAATATACACT+TGG | 0.601056 | 5.3:+78635867 | MS.gene38210:CDS |
| AGAAACTGTAGAGGCTGAAG+TGG | 0.603525 | 5.3:+78639028 | MS.gene38210:CDS |
| GCGGATCATGAGGAAACGGT+TGG | 0.606904 | 5.3:+78637117 | MS.gene38210:CDS |
| ACGGAGAAGGGCGGAGACGG+AGG | 0.607948 | 5.3:-78633253 | None:intergenic |
| TTCATTCAATAGGATAGTAA+GGG | 0.610752 | 5.3:+78635360 | MS.gene38210:intron |
| GATAAGCAATATGTTTGGGA+AGG | 0.612331 | 5.3:+78635582 | MS.gene38210:CDS |
| GACTGTTGTTGAGAAGTACT+GGG | 0.614936 | 5.3:+78636232 | MS.gene38210:CDS |
| ATTTCACGTGACACATTGAG+TGG | 0.618251 | 5.3:-78636955 | None:intergenic |
| AAGACGGCAATACCTCAGCT+TGG | 0.624748 | 5.3:-78634072 | None:intergenic |
| CCTGAGAAGTTGATTCCAAG+AGG | 0.629531 | 5.3:+78635648 | MS.gene38210:CDS |
| AGAATGACACAAAACCAAGA+TGG | 0.630846 | 5.3:+78633909 | MS.gene38210:CDS |
| GATGAGTAAAACCGAAGCAA+CGG | 0.631540 | 5.3:-78637422 | None:intergenic |
| TGTATAAACTGTTAACAATG+AGG | 0.633998 | 5.3:-78634179 | None:intergenic |
| TGAAGTGGTCGAGCCTACTG+AGG | 0.634281 | 5.3:+78639043 | MS.gene38210:CDS |
| CCAAATTCCTGATAATAGAG+TGG | 0.641419 | 5.3:-78638328 | None:intergenic |
| CAAGACGTTTGTGATTCTCA+CGG | 0.644243 | 5.3:-78637397 | None:intergenic |
| ATGATGGGTATGGCTCTTGG+TGG | 0.648855 | 5.3:+78638951 | MS.gene38210:CDS |
| ACTAGTTGCATTAGATTCTG+CGG | 0.656854 | 5.3:-78634023 | None:intergenic |
| ATCCTTCCCAGATGGAGCGT+AGG | 0.657983 | 5.3:-78636691 | None:intergenic |
| CCATGTCCCAGAAACTGTAG+AGG | 0.661329 | 5.3:+78639019 | MS.gene38210:CDS |
| TAACAGTTTATACAGTAACA+AGG | 0.664231 | 5.3:+78634188 | MS.gene38210:CDS |
| GGAATTCATGAAAAGCAGAA+GGG | 0.664392 | 5.3:+78638286 | MS.gene38210:CDS |
| GCATGAAGGTGCGGATCATG+AGG | 0.668221 | 5.3:+78637107 | MS.gene38210:intron |
| TATTGGAAATGAGACAAACT+GGG | 0.669362 | 5.3:-78635858 | None:intergenic |
| GACATGGTACTGTGTTTGAG+CGG | 0.671668 | 5.3:-78639003 | None:intergenic |
| TAACAAGGAAGTGTTTCTCA+GGG | 0.675191 | 5.3:+78634203 | MS.gene38210:CDS |
| GAAATTTGAGTACCAAGCTG+AGG | 0.677594 | 5.3:+78634060 | MS.gene38210:CDS |
| GTGATGCCTTGGATAAGCTG+CGG | 0.678986 | 5.3:+78634984 | MS.gene38210:CDS |
| TCCGCCCTTCTCCGTTACGG+CGG | 0.686445 | 5.3:+78633261 | MS.gene38210:CDS |
| TAGCTCATATACCATAGCTG+AGG | 0.691981 | 5.3:+78635617 | MS.gene38210:CDS |
| CAGCCAAGATGAGAAGACTG+AGG | 0.695984 | 5.3:+78636086 | MS.gene38210:CDS |
| GGTTGATGAGGATCCAGCTG+AGG | 0.697511 | 5.3:+78636053 | MS.gene38210:CDS |
| GCCGCCGTAACGGAGAAGGG+CGG | 0.712660 | 5.3:-78633262 | None:intergenic |
| ATCCATGAGCGACAACAGAG+AGG | 0.716932 | 5.3:+78637171 | MS.gene38210:CDS |
| GTAAAGTGTGATGATGCCAA+TGG | 0.728238 | 5.3:-78636457 | None:intergenic |
| ATCATCACACTTTACCACAG+AGG | 0.738590 | 5.3:+78636465 | MS.gene38210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTATTTTTTTTAT+AGG | + | chr5.3:78634670-78634689 | MS.gene38210:intron | 0.0% |
| !! | CAAATTATAAATTGAAATAA+TGG | + | chr5.3:78638401-78638420 | MS.gene38210:intron | 10.0% |
| !! | AGAAAACTATTTATAGAAAT+CGG | + | chr5.3:78634588-78634607 | MS.gene38210:intron | 15.0% |
| !! | ATATGTGTAAAGTTAAAAAA+CGG | - | chr5.3:78636184-78636203 | None:intergenic | 15.0% |
| !! | TTAATTTCTCAAATTATTAC+CGG | - | chr5.3:78638653-78638672 | None:intergenic | 15.0% |
| !!! | ATATTGTGATATATTTGTTT+TGG | + | chr5.3:78634136-78634155 | MS.gene38210:intron | 15.0% |
| !!! | TATTTCTAGAATAAATTTTG+AGG | - | chr5.3:78634863-78634882 | None:intergenic | 15.0% |
| !! | AAATCTTTAATCTAAACTGT+TGG | + | chr5.3:78638729-78638748 | MS.gene38210:intron | 20.0% |
| !! | AATATTGAAAACAACAACAA+TGG | - | chr5.3:78633833-78633852 | None:intergenic | 20.0% |
| !! | ACTAATATACTAATAACAGA+AGG | - | chr5.3:78635724-78635743 | None:intergenic | 20.0% |
| !! | ACTTACAGTAATTTGAAAAA+GGG | + | chr5.3:78633484-78633503 | MS.gene38210:intron | 20.0% |
| !! | AGATTTCTCAGAATTTAATA+CGG | - | chr5.3:78633939-78633958 | None:intergenic | 20.0% |
| !! | ATCCAAAATTAATTACGAAA+AGG | - | chr5.3:78637815-78637834 | None:intergenic | 20.0% |
| !! | ATTCAATCTGATAAAGATAA+TGG | + | chr5.3:78635064-78635083 | MS.gene38210:CDS | 20.0% |
| !! | TAATTAAAACCAAAGATGTA+GGG | - | chr5.3:78634905-78634924 | None:intergenic | 20.0% |
| !! | TATATAGTAGCAATTATTGA+GGG | - | chr5.3:78634379-78634398 | None:intergenic | 20.0% |
| !! | TATATATACTTTGATTCATC+TGG | + | chr5.3:78636534-78636553 | MS.gene38210:intron | 20.0% |
| !! | TATCTTTATCAGATTGAATT+CGG | - | chr5.3:78635063-78635082 | None:intergenic | 20.0% |
| !! | TTAATTAAAACCAAAGATGT+AGG | - | chr5.3:78634906-78634925 | None:intergenic | 20.0% |
| !! | TTCAATCTGATAAAGATAAT+GGG | + | chr5.3:78635065-78635084 | MS.gene38210:CDS | 20.0% |
| !!! | ATAATGGTAATGTATTCTAT+TGG | + | chr5.3:78638417-78638436 | MS.gene38210:intron | 20.0% |
| !!! | ATATGTGTATATTTTTTGTG+TGG | + | chr5.3:78635522-78635541 | MS.gene38210:intron | 20.0% |
| !!! | ATTTTGGATTAATGCTATAT+TGG | + | chr5.3:78637826-78637845 | MS.gene38210:intron | 20.0% |
| !!! | CTTTTGTTATGTAATTTTGT+AGG | + | chr5.3:78637662-78637681 | MS.gene38210:intron | 20.0% |
| !!! | GTATATTAGTTTCTTTATTC+TGG | + | chr5.3:78635734-78635753 | MS.gene38210:intron | 20.0% |
| !!! | TAATAAATATCCTTTTGATC+TGG | - | chr5.3:78637500-78637519 | None:intergenic | 20.0% |
| !!! | TTCCTTTTCGTAATTAATTT+TGG | + | chr5.3:78637810-78637829 | MS.gene38210:intron | 20.0% |
| !!! | TTGAAAAGAGATTTGTTTTT+GGG | + | chr5.3:78633980-78633999 | MS.gene38210:CDS | 20.0% |
| !!! | TTTGAAAAGAGATTTGTTTT+TGG | + | chr5.3:78633979-78633998 | MS.gene38210:CDS | 20.0% |
| ! | AACAACTTAATTGGTCAATT+TGG | + | chr5.3:78635396-78635415 | MS.gene38210:CDS | 25.0% |
| ! | AACTAACTATGTAGCTTATA+TGG | - | chr5.3:78633750-78633769 | None:intergenic | 25.0% |
| ! | AATGTTATGTTTCAGTGTTA+TGG | + | chr5.3:78634274-78634293 | MS.gene38210:intron | 25.0% |
| ! | ATCAAAATTTGTCTCATTAC+AGG | + | chr5.3:78636026-78636045 | MS.gene38210:intron | 25.0% |
| ! | ATCATAAAACTAACCCATAT+AGG | - | chr5.3:78636284-78636303 | None:intergenic | 25.0% |
| ! | ATTAACCTCTTGTAAAATCA+AGG | - | chr5.3:78634704-78634723 | None:intergenic | 25.0% |
| ! | CACTTACAGTAATTTGAAAA+AGG | + | chr5.3:78633483-78633502 | MS.gene38210:intron | 25.0% |
| ! | CCAAAATATCAAAACATACA+AGG | + | chr5.3:78637722-78637741 | MS.gene38210:CDS | 25.0% |
| ! | CTATATAGTAGCAATTATTG+AGG | - | chr5.3:78634380-78634399 | None:intergenic | 25.0% |
| ! | GAAAACATTTAACGAATACT+TGG | + | chr5.3:78636432-78636451 | MS.gene38210:CDS | 25.0% |
| ! | GATGCTAAATATTTGGTAAA+TGG | + | chr5.3:78638794-78638813 | MS.gene38210:intron | 25.0% |
| ! | GTATTCTATTGGTAAATTTC+AGG | + | chr5.3:78638428-78638447 | MS.gene38210:intron | 25.0% |
| ! | TAACAGTTTATACAGTAACA+AGG | + | chr5.3:78634188-78634207 | MS.gene38210:CDS | 25.0% |
| ! | TAATAACAGAAGGTTGAAAA+TGG | - | chr5.3:78635714-78635733 | None:intergenic | 25.0% |
| ! | TATTACATGTTGAAGTTTGT+TGG | + | chr5.3:78633610-78633629 | MS.gene38210:intron | 25.0% |
| ! | TGTATAAACTGTTAACAATG+AGG | - | chr5.3:78634182-78634201 | None:intergenic | 25.0% |
| ! | TTCATTCAATAGGATAGTAA+GGG | + | chr5.3:78635360-78635379 | MS.gene38210:intron | 25.0% |
| ! | TTCTTTACTTTAAATGCAGT+TGG | + | chr5.3:78635134-78635153 | MS.gene38210:intron | 25.0% |
| ! | TTTCATTCAATAGGATAGTA+AGG | + | chr5.3:78635359-78635378 | MS.gene38210:intron | 25.0% |
| !! | GTATTAAATTCTGAGAAATC+TGG | + | chr5.3:78633938-78633957 | MS.gene38210:CDS | 25.0% |
| !! | TTATATGGTTTGAAACACTA+AGG | - | chr5.3:78633735-78633754 | None:intergenic | 25.0% |
| !! | TTTTAAATCTCACGTTTTTG+TGG | + | chr5.3:78633405-78633424 | MS.gene38210:intron | 25.0% |
| !! | TTTTACCTTGATTTTACAAG+AGG | + | chr5.3:78634696-78634715 | MS.gene38210:intron | 25.0% |
| !!! | AATTTTGTAGGTGCTATTTT+TGG | + | chr5.3:78637674-78637693 | MS.gene38210:intron | 25.0% |
| !!! | ATATATAGTGTTGACTATGT+CGG | - | chr5.3:78638614-78638633 | None:intergenic | 25.0% |
| !!! | ATATTTTTTGTGTGGTTTGA+AGG | + | chr5.3:78635530-78635549 | MS.gene38210:intron | 25.0% |
| !!! | CCAAGTTTTAAACTTCAAAA+AGG | - | chr5.3:78633796-78633815 | None:intergenic | 25.0% |
| !!! | CCTTGTATGTTTTGATATTT+TGG | - | chr5.3:78637725-78637744 | None:intergenic | 25.0% |
| !!! | CCTTTTTGAAGTTTAAAACT+TGG | + | chr5.3:78633793-78633812 | MS.gene38210:intron | 25.0% |
| !!! | CTTCATTTTAAGTTTTTAGC+TGG | + | chr5.3:78635493-78635512 | MS.gene38210:intron | 25.0% |
| !!! | CTTCTTTTTGAGAAAGATTT+AGG | + | chr5.3:78635280-78635299 | MS.gene38210:intron | 25.0% |
| AAAACTAACCCATATAGGTT+GGG | - | chr5.3:78636279-78636298 | None:intergenic | 30.0% | |
| AAAATGAACACTGAAACTTG+TGG | - | chr5.3:78634533-78634552 | None:intergenic | 30.0% | |
| AAAATTTGTCTCATTACAGG+TGG | + | chr5.3:78636029-78636048 | MS.gene38210:intron | 30.0% | |
| AATATTTAGCATCATACGTG+AGG | - | chr5.3:78638787-78638806 | None:intergenic | 30.0% | |
| AGCAGTTAAACTTTAACATC+TGG | - | chr5.3:78636148-78636167 | None:intergenic | 30.0% | |
| ATATTGGAAATGAGACAAAC+TGG | - | chr5.3:78635862-78635881 | None:intergenic | 30.0% | |
| ATCCGATAAGCAATATGTTT+GGG | + | chr5.3:78635578-78635597 | MS.gene38210:CDS | 30.0% | |
| CAATATATTAACAATTGCGC+TGG | - | chr5.3:78634122-78634141 | None:intergenic | 30.0% | |
| CACGTATGATGCTAAATATT+TGG | + | chr5.3:78638787-78638806 | MS.gene38210:intron | 30.0% | |
| CTACTATATAGTTTGAGCAT+CGG | + | chr5.3:78634389-78634408 | MS.gene38210:intron | 30.0% | |
| CTACTGTTATACAACGATTT+AGG | + | chr5.3:78638558-78638577 | MS.gene38210:intron | 30.0% | |
| CTCTAACCCAATCAATTTAT+TGG | + | chr5.3:78638882-78638901 | MS.gene38210:intron | 30.0% | |
| CTTGTTGAATTTCTATGACA+TGG | - | chr5.3:78634755-78634774 | None:intergenic | 30.0% | |
| GCTCTGATGTATTATTTACT+TGG | + | chr5.3:78636876-78636895 | MS.gene38210:intron | 30.0% | |
| GTGTTAGAAATCTCATAGAA+TGG | + | chr5.3:78634620-78634639 | MS.gene38210:intron | 30.0% | |
| TAAAACTAACCCATATAGGT+TGG | - | chr5.3:78636280-78636299 | None:intergenic | 30.0% | |
| TAAGAATGAGGAAAAGGAAA+AGG | + | chr5.3:78637971-78637990 | MS.gene38210:CDS | 30.0% | |
| TAATTTGAACGCTAATGTGT+TGG | + | chr5.3:78636607-78636626 | MS.gene38210:intron | 30.0% | |
| TACTGTATAGTTTGAGCATT+GGG | + | chr5.3:78634250-78634269 | MS.gene38210:intron | 30.0% | |
| TATTGGAAATGAGACAAACT+GGG | - | chr5.3:78635861-78635880 | None:intergenic | 30.0% | |
| TCATAGAATGGCAAAATCTT+GGG | + | chr5.3:78634632-78634651 | MS.gene38210:intron | 30.0% | |
| TCTCATTTCCAATATACACT+TGG | + | chr5.3:78635867-78635886 | MS.gene38210:CDS | 30.0% | |
| TGACAAAACTCAAGTATCTT+GGG | - | chr5.3:78636909-78636928 | None:intergenic | 30.0% | |
| TGACATGGATCAAATACAAA+AGG | - | chr5.3:78634740-78634759 | None:intergenic | 30.0% | |
| TGCACACCAATAAATTGATT+GGG | - | chr5.3:78638891-78638910 | None:intergenic | 30.0% | |
| TGGAAATTGGTTACTTGAAA+TGG | + | chr5.3:78636331-78636350 | MS.gene38210:intron | 30.0% | |
| TTCCCAAACATATTGCTTAT+CGG | - | chr5.3:78635583-78635602 | None:intergenic | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | + | chr5.3:78633513-78633532 | MS.gene38210:intron | 30.0% | |
| TTGACAAAACTCAAGTATCT+TGG | - | chr5.3:78636910-78636929 | None:intergenic | 30.0% | |
| TTTGGCAAACACTTGAAATT+GGG | + | chr5.3:78637362-78637381 | MS.gene38210:CDS | 30.0% | |
| ! | AAGTCTTATATTCTTGGTCT+TGG | - | chr5.3:78636730-78636749 | None:intergenic | 30.0% |
| ! | AGTCTTATATTCTTGGTCTT+GGG | - | chr5.3:78636729-78636748 | None:intergenic | 30.0% |
| ! | CAATAAATTGATTGGGTTAG+AGG | - | chr5.3:78638884-78638903 | None:intergenic | 30.0% |
| ! | CACATGAAGTCTTATATTCT+TGG | - | chr5.3:78636736-78636755 | None:intergenic | 30.0% |
| ! | CATCTGGAATCATAATTTCA+TGG | - | chr5.3:78636132-78636151 | None:intergenic | 30.0% |
| ! | GAAATTTTCGACATACCTTA+AGG | - | chr5.3:78635692-78635711 | None:intergenic | 30.0% |
| ! | GAATTTTGTTGACATTAGCA+AGG | + | chr5.3:78637749-78637768 | MS.gene38210:CDS | 30.0% |
| ! | GATTTTCTTTGATTGTGAGT+AGG | + | chr5.3:78633880-78633899 | MS.gene38210:intron | 30.0% |
| ! | TTTCTTTTATGCAGTGATAC+AGG | + | chr5.3:78635166-78635185 | MS.gene38210:intron | 30.0% |
| ! | TTTGGTTTCAAGTGGATTTA+CGG | + | chr5.3:78638518-78638537 | MS.gene38210:CDS | 30.0% |
| !! | AAAGTTTTTGAAAGCTCTGA+AGG | + | chr5.3:78635252-78635271 | MS.gene38210:CDS | 30.0% |
| !! | ACCTCAGTTTTTCTCTAAAA+AGG | + | chr5.3:78636573-78636592 | MS.gene38210:intron | 30.0% |
| !! | AGATACTTGAGTTTTGTCAA+AGG | + | chr5.3:78636910-78636929 | MS.gene38210:CDS | 30.0% |
| !! | TCCTTTTTAGAGAAAAACTG+AGG | - | chr5.3:78636577-78636596 | None:intergenic | 30.0% |
| !! | TTAATTGGTCAATTTGGTGT+GGG | + | chr5.3:78635402-78635421 | MS.gene38210:CDS | 30.0% |
| !! | TTTCTTTATTCTGGAGCTTA+TGG | + | chr5.3:78635743-78635762 | MS.gene38210:intron | 30.0% |
| !!! | ATAAATTTTGAGGTGTAGCT+TGG | - | chr5.3:78634853-78634872 | None:intergenic | 30.0% |
| !!! | ATGTCACTTTCATTTTCGAA+AGG | - | chr5.3:78638196-78638215 | None:intergenic | 30.0% |
| !!! | TGTGATATATTTGTTTTGGC+AGG | + | chr5.3:78634140-78634159 | MS.gene38210:intron | 30.0% |
| AAACTTGTGGCAATCTATTG+GGG | - | chr5.3:78634520-78634539 | None:intergenic | 35.0% | |
| AAAGGAAAAGGAAATGAAGC+AGG | + | chr5.3:78637983-78638002 | MS.gene38210:CDS | 35.0% | |
| AAATGAGACCCAACCTATAT+GGG | + | chr5.3:78636268-78636287 | MS.gene38210:CDS | 35.0% | |
| AATATACACTTGGCAGGAAA+AGG | + | chr5.3:78635877-78635896 | MS.gene38210:CDS | 35.0% | |
| ACAATAGATCAATCGCTCTT+AGG | - | chr5.3:78638488-78638507 | None:intergenic | 35.0% | |
| ACACATAAAGATTGCACTTG+AGG | - | chr5.3:78636505-78636524 | None:intergenic | 35.0% | |
| ACATATTGCTTATCGGATCT+TGG | - | chr5.3:78635576-78635595 | None:intergenic | 35.0% | |
| ACTAGTTGCATTAGATTCTG+CGG | - | chr5.3:78634026-78634045 | None:intergenic | 35.0% | |
| AGAATGACACAAAACCAAGA+TGG | + | chr5.3:78633909-78633928 | MS.gene38210:CDS | 35.0% | |
| AGGAAAGATATACGAGATGA+TGG | + | chr5.3:78638935-78638954 | MS.gene38210:CDS | 35.0% | |
| AGGTGATAAGAATGAGGAAA+AGG | + | chr5.3:78637965-78637984 | MS.gene38210:intron | 35.0% | |
| AGTGCATAGTCATACTTCTT+TGG | - | chr5.3:78635909-78635928 | None:intergenic | 35.0% | |
| ATAGCATCCTTCATTAGATC+AGG | - | chr5.3:78635028-78635047 | None:intergenic | 35.0% | |
| ATATACACTTGGCAGGAAAA+GGG | + | chr5.3:78635878-78635897 | MS.gene38210:CDS | 35.0% | |
| ATTACTGTGAAAAAGAACGC+AGG | - | chr5.3:78634960-78634979 | None:intergenic | 35.0% | |
| ATTTCCAATATACACTTGGC+AGG | + | chr5.3:78635871-78635890 | MS.gene38210:CDS | 35.0% | |
| CAATAGATCAATCGCTCTTA+GGG | - | chr5.3:78638487-78638506 | None:intergenic | 35.0% | |
| CCAAATTCCTGATAATAGAG+TGG | - | chr5.3:78638331-78638350 | None:intergenic | 35.0% | |
| CCACTCTATTATCAGGAATT+TGG | + | chr5.3:78638328-78638347 | MS.gene38210:CDS | 35.0% | |
| CTACTGTATAGTTTGAGCAT+TGG | + | chr5.3:78634249-78634268 | MS.gene38210:intron | 35.0% | |
| CTCAAACTATACAGTAGTGA+TGG | - | chr5.3:78634246-78634265 | None:intergenic | 35.0% | |
| CTCATAGAATGGCAAAATCT+TGG | + | chr5.3:78634631-78634650 | MS.gene38210:intron | 35.0% | |
| CTGCACACCAATAAATTGAT+TGG | - | chr5.3:78638892-78638911 | None:intergenic | 35.0% | |
| CTTTGGCAAACACTTGAAAT+TGG | + | chr5.3:78637361-78637380 | MS.gene38210:CDS | 35.0% | |
| GAAACTTGTGGCAATCTATT+GGG | - | chr5.3:78634521-78634540 | None:intergenic | 35.0% | |
| GAACATGAAACCAGATCAAA+AGG | + | chr5.3:78637487-78637506 | MS.gene38210:CDS | 35.0% | |
| GACTGGATTAAGAAACGTTT+GGG | + | chr5.3:78638023-78638042 | MS.gene38210:CDS | 35.0% | |
| GAGAAAGATGAATACCGAAT+GGG | - | chr5.3:78633334-78633353 | None:intergenic | 35.0% | |
| GATAAGCAATATGTTTGGGA+AGG | + | chr5.3:78635582-78635601 | MS.gene38210:CDS | 35.0% | |
| GATCCGATAAGCAATATGTT+TGG | + | chr5.3:78635577-78635596 | MS.gene38210:CDS | 35.0% | |
| GCAGCTGGTAAAATATTAAC+AGG | - | chr5.3:78637302-78637321 | None:intergenic | 35.0% | |
| GGAAAGATATACGAGATGAT+GGG | + | chr5.3:78638936-78638955 | MS.gene38210:CDS | 35.0% | |
| GGAATTCATGAAAAGCAGAA+GGG | + | chr5.3:78638286-78638305 | MS.gene38210:CDS | 35.0% | |
| GTAGCAATTATTGAGGGAAA+AGG | - | chr5.3:78634373-78634392 | None:intergenic | 35.0% | |
| GTAGGACTATGAAAAGTTCT+GGG | + | chr5.3:78637334-78637353 | MS.gene38210:intron | 35.0% | |
| TATATTAACAATTGCGCTGG+AGG | - | chr5.3:78634119-78634138 | None:intergenic | 35.0% | |
| TATTAGACTGACGTCAATAC+CGG | + | chr5.3:78638631-78638650 | MS.gene38210:intron | 35.0% | |
| TCAAACCAAAATGTGCATTG+TGG | + | chr5.3:78638846-78638865 | MS.gene38210:intron | 35.0% | |
| TCCTAAAGAAGTCACTAAAG+AGG | + | chr5.3:78636390-78636409 | MS.gene38210:CDS | 35.0% | |
| TCCTCTTTAGTGACTTCTTT+AGG | - | chr5.3:78636394-78636413 | None:intergenic | 35.0% | |
| TGAAACTTGTGGCAATCTAT+TGG | - | chr5.3:78634522-78634541 | None:intergenic | 35.0% | |
| TGACATGGATCAAATACGAA+AGG | - | chr5.3:78634783-78634802 | None:intergenic | 35.0% | |
| TGACTGGATTAAGAAACGTT+TGG | + | chr5.3:78638022-78638041 | MS.gene38210:CDS | 35.0% | |
| TGATGAAGAGTTTATCAGCT+TGG | + | chr5.3:78637451-78637470 | MS.gene38210:CDS | 35.0% | |
| TGGAATTCATGAAAAGCAGA+AGG | + | chr5.3:78638285-78638304 | MS.gene38210:CDS | 35.0% | |
| TGTAGGACTATGAAAAGTTC+TGG | + | chr5.3:78637333-78637352 | MS.gene38210:intron | 35.0% | |
| TGTTTCTCAGGGAACTTATT+AGG | + | chr5.3:78634214-78634233 | MS.gene38210:CDS | 35.0% | |
| TTACTGTGAAAAAGAACGCA+GGG | - | chr5.3:78634959-78634978 | None:intergenic | 35.0% | |
| TTAGCATCAAACACTTCTGA+TGG | + | chr5.3:78633666-78633685 | MS.gene38210:intron | 35.0% | |
| TTCATTTCAGATGACTTCGA+TGG | + | chr5.3:78636765-78636784 | MS.gene38210:CDS | 35.0% | |
| TTCTGTAGGTGATAAGAATG+AGG | + | chr5.3:78637959-78637978 | MS.gene38210:intron | 35.0% | |
| TTCTTTGATTGTGAGTAGGT+GGG | + | chr5.3:78633884-78633903 | MS.gene38210:intron | 35.0% | |
| TTTCATGAATTCCATGCTAG+CGG | - | chr5.3:78638279-78638298 | None:intergenic | 35.0% | |
| TTTCTTTGATTGTGAGTAGG+TGG | + | chr5.3:78633883-78633902 | MS.gene38210:intron | 35.0% | |
| ! | AAAGGCTTTTGACATGATTC+TGG | + | chr5.3:78637144-78637163 | MS.gene38210:CDS | 35.0% |
| ! | AAGGCTTTTGACATGATTCT+GGG | + | chr5.3:78637145-78637164 | MS.gene38210:CDS | 35.0% |
| ! | AATTTCACGTCCAGTTTTCA+AGG | - | chr5.3:78635991-78636010 | None:intergenic | 35.0% |
| ! | ACTATGCACTCATGATCTTT+TGG | + | chr5.3:78635919-78635938 | MS.gene38210:intron | 35.0% |
| ! | ACTGTATAGTTTGAGCATTG+GGG | + | chr5.3:78634251-78634270 | MS.gene38210:intron | 35.0% |
| ! | ACTTACCACAATGCACATTT+TGG | - | chr5.3:78638854-78638873 | None:intergenic | 35.0% |
| ! | ATTTCACGTCCAGTTTTCAA+GGG | - | chr5.3:78635990-78636009 | None:intergenic | 35.0% |
| ! | CTAATGAAGGCACAAACTAT+GGG | + | chr5.3:78638248-78638267 | MS.gene38210:CDS | 35.0% |
| ! | CTTAATTGGTCAATTTGGTG+TGG | + | chr5.3:78635401-78635420 | MS.gene38210:CDS | 35.0% |
| ! | GAAGTTTAAAACTTGGAGCT+TGG | + | chr5.3:78633800-78633819 | MS.gene38210:intron | 35.0% |
| ! | GGATAAAAGTGATGATGATG+TGG | + | chr5.3:78635468-78635487 | MS.gene38210:intron | 35.0% |
| ! | TTTAATACGGAGTACCATCT+TGG | - | chr5.3:78633926-78633945 | None:intergenic | 35.0% |
| ! | TTTAGGTTCCACTGTGAAAT+TGG | + | chr5.3:78638575-78638594 | MS.gene38210:intron | 35.0% |
| ! | TTTTCCTGCCAAGTGTATAT+TGG | - | chr5.3:78635878-78635897 | None:intergenic | 35.0% |
| !! | ACGAAGGTGTTTCATTCAAT+AGG | + | chr5.3:78635350-78635369 | MS.gene38210:intron | 35.0% |
| !! | ATGTAGTTTGCTGTTTCTGT+AGG | + | chr5.3:78637945-78637964 | MS.gene38210:intron | 35.0% |
| !! | CTAAACTGTTGGTGCTATAT+CGG | + | chr5.3:78638740-78638759 | MS.gene38210:intron | 35.0% |
| !! | CTCTTTTAAGAACACACCTT+GGG | + | chr5.3:78634478-78634497 | MS.gene38210:intron | 35.0% |
| !! | GAAAAGTTCTGGGATAACTT+TGG | + | chr5.3:78637344-78637363 | MS.gene38210:CDS | 35.0% |
| !! | TAAATCAAATTTGCTGCTGC+AGG | + | chr5.3:78638225-78638244 | MS.gene38210:intron | 35.0% |
| !! | TAACAAGGAAGTGTTTCTCA+GGG | + | chr5.3:78634203-78634222 | MS.gene38210:CDS | 35.0% |
| !! | TCTCTTTTAAGAACACACCT+TGG | + | chr5.3:78634477-78634496 | MS.gene38210:intron | 35.0% |
| !! | TCTCTTTTAAGAGCTTACCT+TGG | + | chr5.3:78634337-78634356 | MS.gene38210:intron | 35.0% |
| !!! | AGTTTGTTGGTTTTACGTTG+TGG | + | chr5.3:78633623-78633642 | MS.gene38210:intron | 35.0% |
| !!! | ATTTGTTTTGGCAGGTTAGT+CGG | + | chr5.3:78634148-78634167 | MS.gene38210:intron | 35.0% |
| !!! | TTTGTAGGTGCTATTTTTGG+TGG | + | chr5.3:78637677-78637696 | MS.gene38210:intron | 35.0% |
| !!! | TTTTTTGTGTGGTTTGAAGG+TGG | + | chr5.3:78635533-78635552 | MS.gene38210:intron | 35.0% |
| AACTAATCCTGACGATCAAG+AGG | + | chr5.3:78638461-78638480 | MS.gene38210:CDS | 40.0% | |
| AACTTGTGGCAATCTATTGG+GGG | - | chr5.3:78634519-78634538 | None:intergenic | 40.0% | |
| ACCTTTCTTGGAGAAACTTG+CGG | + | chr5.3:78637556-78637575 | MS.gene38210:CDS | 40.0% | |
| AGAATGGCAAAATCTTGGGA+AGG | + | chr5.3:78634636-78634655 | MS.gene38210:intron | 40.0% | |
| AGCAAAAAACACTACCTCTG+TGG | - | chr5.3:78636482-78636501 | None:intergenic | 40.0% | |
| AGCCGCATAGTAAGTAGATA+GGG | + | chr5.3:78636988-78637007 | MS.gene38210:intron | 40.0% | |
| AGTTACTCAAGAAGTCAAGC+TGG | - | chr5.3:78636817-78636836 | None:intergenic | 40.0% | |
| ATACCTTAAGGTGCAGTGTA+AGG | - | chr5.3:78635680-78635699 | None:intergenic | 40.0% | |
| ATAGCACCAACACTTCTGAT+TGG | - | chr5.3:78633579-78633598 | None:intergenic | 40.0% | |
| ATAGTAAGTAGATAGGGTGC+AGG | + | chr5.3:78636994-78637013 | MS.gene38210:intron | 40.0% | |
| ATAGTCCTACACACAGAACA+AGG | - | chr5.3:78637324-78637343 | None:intergenic | 40.0% | |
| ATATTTGCCATGCCATACAG+CGG | + | chr5.3:78637889-78637908 | MS.gene38210:intron | 40.0% | |
| ATCATCACACTTTACCACAG+AGG | + | chr5.3:78636465-78636484 | MS.gene38210:CDS | 40.0% | |
| ATTTCACGTGACACATTGAG+TGG | - | chr5.3:78636958-78636977 | None:intergenic | 40.0% | |
| ATTTGTCTCATTACAGGTGG+AGG | + | chr5.3:78636032-78636051 | MS.gene38210:intron | 40.0% | |
| CAAATGAGACCCAACCTATA+TGG | + | chr5.3:78636267-78636286 | MS.gene38210:CDS | 40.0% | |
| CAAGACGTTTGTGATTCTCA+CGG | - | chr5.3:78637400-78637419 | None:intergenic | 40.0% | |
| CACCCTATCTACTTACTATG+CGG | - | chr5.3:78636993-78637012 | None:intergenic | 40.0% | |
| CAGCACACAAGATACATAAC+AGG | - | chr5.3:78635330-78635349 | None:intergenic | 40.0% | |
| CATAACAGGACAGCAGAATA+AGG | - | chr5.3:78635316-78635335 | None:intergenic | 40.0% | |
| CATAGGATCCAATTTCACAG+TGG | - | chr5.3:78638586-78638605 | None:intergenic | 40.0% | |
| CGAGAAAGATGAATACCGAA+TGG | - | chr5.3:78633335-78633354 | None:intergenic | 40.0% | |
| CTTGGAACTATTGCTCAAAG+TGG | + | chr5.3:78635223-78635242 | MS.gene38210:CDS | 40.0% | |
| CTTGTCGAATCTCTATGACA+TGG | - | chr5.3:78634798-78634817 | None:intergenic | 40.0% | |
| GAAAAGGAAAACCAGAACCA+AGG | - | chr5.3:78634357-78634376 | None:intergenic | 40.0% | |
| GAAATTTGAGTACCAAGCTG+AGG | + | chr5.3:78634060-78634079 | MS.gene38210:CDS | 40.0% | |
| GAATGGCAAAATCTTGGGAA+GGG | + | chr5.3:78634637-78634656 | MS.gene38210:intron | 40.0% | |
| GATGAGTAAAACCGAAGCAA+CGG | - | chr5.3:78637425-78637444 | None:intergenic | 40.0% | |
| GTAAATGGATCACATGCTAG+TGG | + | chr5.3:78638809-78638828 | MS.gene38210:intron | 40.0% | |
| GTACTTCTCAACAACAGTCT+TGG | - | chr5.3:78636231-78636250 | None:intergenic | 40.0% | |
| GTGGATTTACGGTAAGCTAT+TGG | + | chr5.3:78638529-78638548 | MS.gene38210:intron | 40.0% | |
| TAACGAATACTTGGAGCCAT+TGG | + | chr5.3:78636441-78636460 | MS.gene38210:CDS | 40.0% | |
| TACAGAGCCTGATCTAATGA+AGG | + | chr5.3:78635018-78635037 | MS.gene38210:CDS | 40.0% | |
| TACTCAAATTTCTCAGCTGG+TGG | - | chr5.3:78634052-78634071 | None:intergenic | 40.0% | |
| TAGCTCATATACCATAGCTG+AGG | + | chr5.3:78635617-78635636 | MS.gene38210:CDS | 40.0% | |
| TCAAACACTTCTGATGGAAG+AGG | + | chr5.3:78633672-78633691 | MS.gene38210:intron | 40.0% | |
| TCCTGATAATAGAGTGGTCA+GGG | - | chr5.3:78638325-78638344 | None:intergenic | 40.0% | |
| TCTATTGTACGATGCAGCTT+TGG | + | chr5.3:78638500-78638519 | MS.gene38210:CDS | 40.0% | |
| TGACATTAGCAAGGAAGACT+TGG | + | chr5.3:78637758-78637777 | MS.gene38210:CDS | 40.0% | |
| TGACTATGTCGGTACATCAT+AGG | - | chr5.3:78638603-78638622 | None:intergenic | 40.0% | |
| TGCAAAGAACACACCTTTCT+TGG | + | chr5.3:78637544-78637563 | MS.gene38210:CDS | 40.0% | |
| TGCGTGCTTAAAGTGGAAAT+TGG | + | chr5.3:78636318-78636337 | MS.gene38210:intron | 40.0% | |
| TGCTTCTATGTTGTGCATGA+AGG | + | chr5.3:78637093-78637112 | MS.gene38210:intron | 40.0% | |
| TGGATTGCAACCTCATCTAT+TGG | - | chr5.3:78637705-78637724 | None:intergenic | 40.0% | |
| TGGTACTCAAATTTCTCAGC+TGG | - | chr5.3:78634055-78634074 | None:intergenic | 40.0% | |
| TGTCAAGTACCCTACATCTT+TGG | + | chr5.3:78634893-78634912 | MS.gene38210:intron | 40.0% | |
| TTAAGAGCTTACCTTGGTTC+TGG | + | chr5.3:78634343-78634362 | MS.gene38210:intron | 40.0% | |
| TTACCTCAGTCTTCTCATCT+TGG | - | chr5.3:78636092-78636111 | None:intergenic | 40.0% | |
| TTATGCAGTGATACAGGCAT+TGG | + | chr5.3:78635172-78635191 | MS.gene38210:intron | 40.0% | |
| TTCATCTGCTTACTCCCATT+CGG | + | chr5.3:78633317-78633336 | MS.gene38210:CDS | 40.0% | |
| TTCATGAATTCCATGCTAGC+GGG | - | chr5.3:78638278-78638297 | None:intergenic | 40.0% | |
| TTCCTGATAATAGAGTGGTC+AGG | - | chr5.3:78638326-78638345 | None:intergenic | 40.0% | |
| TTTCTTGTAGAGAGAGAGAG+AGG | - | chr5.3:78634573-78634592 | None:intergenic | 40.0% | |
| TTTGAACGCTAATGTGTTGG+TGG | + | chr5.3:78636610-78636629 | MS.gene38210:intron | 40.0% | |
| ! | AACCAAATTTTCCTGACACC+AGG | - | chr5.3:78638103-78638122 | None:intergenic | 40.0% |
| ! | ACACTTCCAATCAGAAGTGT+TGG | + | chr5.3:78633570-78633589 | MS.gene38210:intron | 40.0% |
| ! | AGACTGTTGTTGAGAAGTAC+TGG | + | chr5.3:78636231-78636250 | MS.gene38210:CDS | 40.0% |
| ! | AGTTTAGCTCGACAATTGAC+TGG | + | chr5.3:78638006-78638025 | MS.gene38210:CDS | 40.0% |
| ! | ATCCCTCTGAAAACAAGTCA+AGG | - | chr5.3:78635786-78635805 | None:intergenic | 40.0% |
| ! | GCTAATGAAGGCACAAACTA+TGG | + | chr5.3:78638247-78638266 | MS.gene38210:CDS | 40.0% |
| ! | GCTGATCGGGTATGTATTTT+TGG | + | chr5.3:78635447-78635466 | MS.gene38210:intron | 40.0% |
| ! | GTAAAGTGTGATGATGCCAA+TGG | - | chr5.3:78636460-78636479 | None:intergenic | 40.0% |
| ! | TGAGCGGACTCAAAATGATT+AGG | - | chr5.3:78638990-78639009 | None:intergenic | 40.0% |
| ! | TGGTGTCAGGAAAATTTGGT+TGG | + | chr5.3:78638102-78638121 | MS.gene38210:CDS | 40.0% |
| ! | TGTTTTCAGAGGGATGACAA+AGG | + | chr5.3:78635791-78635810 | MS.gene38210:intron | 40.0% |
| ! | TTTGGTGGATCCAATAGATG+AGG | + | chr5.3:78637692-78637711 | MS.gene38210:CDS | 40.0% |
| !! | AATCAGAAGTGTTGGTGCTA+TGG | + | chr5.3:78633578-78633597 | MS.gene38210:intron | 40.0% |
| !! | CTTGAGTTTTGTCAAAGGTG+TGG | + | chr5.3:78636915-78636934 | MS.gene38210:CDS | 40.0% |
| !! | GACTGTTGTTGAGAAGTACT+GGG | + | chr5.3:78636232-78636251 | MS.gene38210:CDS | 40.0% |
| !! | GATATACGAGATGATGGGTA+TGG | + | chr5.3:78638941-78638960 | MS.gene38210:CDS | 40.0% |
| !! | GGTGCTGACAACAACTTAAT+TGG | + | chr5.3:78635387-78635406 | MS.gene38210:CDS | 40.0% |
| !! | GTAACAAGGAAGTGTTTCTC+AGG | + | chr5.3:78634202-78634221 | MS.gene38210:CDS | 40.0% |
| !! | TGTTGAGAAGTACTGGGATT+GGG | + | chr5.3:78636238-78636257 | MS.gene38210:CDS | 40.0% |
| !! | TTGTTGAGAAGTACTGGGAT+TGG | + | chr5.3:78636237-78636256 | MS.gene38210:CDS | 40.0% |
| !!! | CTGCTTTTCTAGTTGCTGAT+CGG | + | chr5.3:78635433-78635452 | MS.gene38210:CDS | 40.0% |
| !!! | GTCCTTGACTTGTTTTCAGA+GGG | + | chr5.3:78635781-78635800 | MS.gene38210:intron | 40.0% |
| !!! | TGCTTTTCTAGTTGCTGATC+GGG | + | chr5.3:78635434-78635453 | MS.gene38210:CDS | 40.0% |
| !!! | TGTCCTTGACTTGTTTTCAG+AGG | + | chr5.3:78635780-78635799 | MS.gene38210:intron | 40.0% |
| ACAAGCTTCTCAATCCTCTC+TGG | - | chr5.3:78635827-78635846 | None:intergenic | 45.0% | |
| ACCCTGACCACTCTATTATC+AGG | + | chr5.3:78638321-78638340 | MS.gene38210:CDS | 45.0% | |
| ACTTCAGCCTCTACAGTTTC+TGG | - | chr5.3:78639029-78639048 | None:intergenic | 45.0% | |
| AGAAACTGTAGAGGCTGAAG+TGG | + | chr5.3:78639028-78639047 | MS.gene38210:CDS | 45.0% | |
| AGATGACTTCGATGGAGAAC+TGG | + | chr5.3:78636773-78636792 | MS.gene38210:CDS | 45.0% | |
| AGCAAGGAAGACTTGGATCT+AGG | + | chr5.3:78637765-78637784 | MS.gene38210:CDS | 45.0% | |
| ATTACGTCATCCTTCCCAGA+TGG | - | chr5.3:78636702-78636721 | None:intergenic | 45.0% | |
| ATTCCCTAGCCCTTGAAAAC+TGG | + | chr5.3:78635978-78635997 | MS.gene38210:intron | 45.0% | |
| CAAAAACCGCAGCTTATCCA+AGG | - | chr5.3:78634993-78635012 | None:intergenic | 45.0% | |
| CAGGAACTAGTTGACTGTCT+TGG | + | chr5.3:78635205-78635224 | MS.gene38210:CDS | 45.0% | |
| CAGTAATGCAAGTGATGCCT+TGG | + | chr5.3:78634973-78634992 | MS.gene38210:intron | 45.0% | |
| CATACAGCGGCATGTATTCA+TGG | + | chr5.3:78637902-78637921 | MS.gene38210:intron | 45.0% | |
| CATGAATACATGCCGCTGTA+TGG | - | chr5.3:78637904-78637923 | None:intergenic | 45.0% | |
| CCTCTTGGAATCAACTTCTC+AGG | - | chr5.3:78635651-78635670 | None:intergenic | 45.0% | |
| CTATGTTGTGCATGAAGGTG+CGG | + | chr5.3:78637098-78637117 | MS.gene38210:intron | 45.0% | |
| CTTCAGCCTCTACAGTTTCT+GGG | - | chr5.3:78639028-78639047 | None:intergenic | 45.0% | |
| CTTCGATGGAGAACTGGTAT+AGG | + | chr5.3:78636779-78636798 | MS.gene38210:intron | 45.0% | |
| GACATGGTACTGTGTTTGAG+CGG | - | chr5.3:78639006-78639025 | None:intergenic | 45.0% | |
| GACCACACACATACGAAAGA+CGG | - | chr5.3:78634091-78634110 | None:intergenic | 45.0% | |
| GAGCCGCATAGTAAGTAGAT+AGG | + | chr5.3:78636987-78637006 | MS.gene38210:intron | 45.0% | |
| GCAATATGTTTGGGAAGGAG+AGG | + | chr5.3:78635587-78635606 | MS.gene38210:CDS | 45.0% | |
| TATCCAACCCGTGTTAGTGT+GGG | - | chr5.3:78638703-78638722 | None:intergenic | 45.0% | |
| TCCGCAAGTTTCTCCAAGAA+AGG | - | chr5.3:78637560-78637579 | None:intergenic | 45.0% | |
| TGCAGGGTGAGGTAGAATTT+AGG | + | chr5.3:78636649-78636668 | MS.gene38210:intron | 45.0% | |
| TGCATGATGCGTGCTTAAAG+TGG | + | chr5.3:78636311-78636330 | MS.gene38210:intron | 45.0% | |
| TGGCAATCTATTGGGGGAAA+GGG | - | chr5.3:78634513-78634532 | None:intergenic | 45.0% | |
| TGGGAGTAAGCAGATGAAAG+TGG | - | chr5.3:78633315-78633334 | None:intergenic | 45.0% | |
| TTAAGAACACACCTTGGGTC+TGG | + | chr5.3:78634483-78634502 | MS.gene38210:intron | 45.0% | |
| TTAAGCACGCATCATGCAGT+TGG | - | chr5.3:78636309-78636328 | None:intergenic | 45.0% | |
| ! | AAGGTTTTGCTCATCCAGAG+AGG | + | chr5.3:78635810-78635829 | MS.gene38210:CDS | 45.0% |
| ! | CAATAGGATAGTAAGGGTGC+TGG | + | chr5.3:78635366-78635385 | MS.gene38210:intron | 45.0% |
| ! | CCTGAGAAGTTGATTCCAAG+AGG | + | chr5.3:78635648-78635667 | MS.gene38210:CDS | 45.0% |
| ! | GATGCAGCTTTGGTTTCAAG+TGG | + | chr5.3:78638510-78638529 | MS.gene38210:CDS | 45.0% |
| ! | GTATGGCTCTTGGTGGTAAA+TGG | + | chr5.3:78638958-78638977 | MS.gene38210:CDS | 45.0% |
| ! | GTCCTGGTGTCAGGAAAATT+TGG | + | chr5.3:78638098-78638117 | MS.gene38210:CDS | 45.0% |
| ! | TGTATCTTGTGTGCTGACGA+AGG | + | chr5.3:78635334-78635353 | MS.gene38210:intron | 45.0% |
| !! | AGGCATTGGTATGACTAAGC+AGG | + | chr5.3:78635186-78635205 | MS.gene38210:CDS | 45.0% |
| !! | ATTACAGGTGGAGGTTGATG+AGG | + | chr5.3:78636041-78636060 | MS.gene38210:intron | 45.0% |
| !! | ATTTGGTTGGTCTGCGAACA+TGG | + | chr5.3:78638115-78638134 | MS.gene38210:CDS | 45.0% |
| !! | CTTCTGATGGAAGAGGTGTT+TGG | + | chr5.3:78633679-78633698 | MS.gene38210:intron | 45.0% |
| !! | TTTTGATTGCCAGCCTCAGT+AGG | - | chr5.3:78639059-78639078 | None:intergenic | 45.0% |
| !! | TTGTTTATTTATTTATTTAT+TGG | + | chr5.3:78637637-78637656 | MS.gene38210:intron | 5.0% |
| AACGTCTTGCTCCGTTGCTT+CGG | + | chr5.3:78637411-78637430 | MS.gene38210:CDS | 50.0% | |
| AAGACGGCAATACCTCAGCT+TGG | - | chr5.3:78634075-78634094 | None:intergenic | 50.0% | |
| AGGATCTGTCTCCTCAGCTA+TGG | - | chr5.3:78635631-78635650 | None:intergenic | 50.0% | |
| AGGTGCGGATCATGAGGAAA+CGG | + | chr5.3:78637113-78637132 | MS.gene38210:intron | 50.0% | |
| AGTGTAAGGCGAGTTCCTCT+TGG | - | chr5.3:78635666-78635685 | None:intergenic | 50.0% | |
| ATACATGCCGCTGTATGGCA+TGG | - | chr5.3:78637899-78637918 | None:intergenic | 50.0% | |
| ATCCATGAGCGACAACAGAG+AGG | + | chr5.3:78637171-78637190 | MS.gene38210:CDS | 50.0% | |
| ATCTTTCCTCCAAGCTGTGC+TGG | - | chr5.3:78638924-78638943 | None:intergenic | 50.0% | |
| CACGTGACACATTGAGTGGA+AGG | - | chr5.3:78636954-78636973 | None:intergenic | 50.0% | |
| CAGCCAAGATGAGAAGACTG+AGG | + | chr5.3:78636086-78636105 | MS.gene38210:CDS | 50.0% | |
| CCAAGCTGTGCTGGATTATC+AGG | - | chr5.3:78638915-78638934 | None:intergenic | 50.0% | |
| CCATGTCCCAGAAACTGTAG+AGG | + | chr5.3:78639019-78639038 | MS.gene38210:CDS | 50.0% | |
| CCTGATAATCCAGCACAGCT+TGG | + | chr5.3:78638912-78638931 | MS.gene38210:CDS | 50.0% | |
| CTTGGAGAAACTTGCGGAGA+AGG | + | chr5.3:78637562-78637581 | MS.gene38210:CDS | 50.0% | |
| GAAAGGGAAAACCAGACCCA+AGG | - | chr5.3:78634497-78634516 | None:intergenic | 50.0% | |
| GAGGTGTAGCTTGGTCACAA+GGG | - | chr5.3:78634844-78634863 | None:intergenic | 50.0% | |
| GATAATCCAGCACAGCTTGG+AGG | + | chr5.3:78638915-78638934 | MS.gene38210:CDS | 50.0% | |
| GTATCCAACCCGTGTTAGTG+TGG | - | chr5.3:78638704-78638723 | None:intergenic | 50.0% | |
| GTCAGTGTCCCACACTAACA+CGG | + | chr5.3:78638692-78638711 | MS.gene38210:intron | 50.0% | |
| GTGATGCCTTGGATAAGCTG+CGG | + | chr5.3:78634984-78635003 | MS.gene38210:CDS | 50.0% | |
| GTGGCAATCTATTGGGGGAA+AGG | - | chr5.3:78634514-78634533 | None:intergenic | 50.0% | |
| TACACACAGAACAAGGCAGC+TGG | - | chr5.3:78637317-78637336 | None:intergenic | 50.0% | |
| TACCTCTCTGTTGTCGCTCA+TGG | - | chr5.3:78637176-78637195 | None:intergenic | 50.0% | |
| TCAGTGTCCCACACTAACAC+GGG | + | chr5.3:78638693-78638712 | MS.gene38210:intron | 50.0% | |
| TCGCCTTACACTGCACCTTA+AGG | + | chr5.3:78635674-78635693 | MS.gene38210:CDS | 50.0% | |
| TGAGGTGTAGCTTGGTCACA+AGG | - | chr5.3:78634845-78634864 | None:intergenic | 50.0% | |
| TGCCGTCTTTCGTATGTGTG+TGG | + | chr5.3:78634086-78634105 | MS.gene38210:intron | 50.0% | |
| TTGCTGCTGCAGGCTAATGA+AGG | + | chr5.3:78638235-78638254 | MS.gene38210:intron | 50.0% | |
| TTTCCTGACACCAGGACACA+AGG | - | chr5.3:78638095-78638114 | None:intergenic | 50.0% | |
| ! | AGCTGCCTTGTTCTGTGTGT+AGG | + | chr5.3:78637316-78637335 | MS.gene38210:intron | 50.0% |
| ! | GAGGAAACGGTTGGTCAGAA+AGG | + | chr5.3:78637126-78637145 | MS.gene38210:CDS | 50.0% |
| ! | GTTGGTCTGCGAACATGGAA+AGG | + | chr5.3:78638120-78638139 | MS.gene38210:CDS | 50.0% |
| !! | AATGTGTTGGTGGCACTTGG+TGG | + | chr5.3:78636620-78636639 | MS.gene38210:intron | 50.0% |
| !! | ACGTCCAGTTTTCAAGGGCT+AGG | - | chr5.3:78635985-78636004 | None:intergenic | 50.0% |
| !! | ATGATGGGTATGGCTCTTGG+TGG | + | chr5.3:78638951-78638970 | MS.gene38210:CDS | 50.0% |
| !! | CACTTGGTGGTGATGTTGCA+GGG | + | chr5.3:78636633-78636652 | MS.gene38210:intron | 50.0% |
| !! | CCTCTACAGTTTCTGGGACA+TGG | - | chr5.3:78639022-78639041 | None:intergenic | 50.0% |
| !! | CGTCCAGTTTTCAAGGGCTA+GGG | - | chr5.3:78635984-78636003 | None:intergenic | 50.0% |
| !! | GAGATGATGGGTATGGCTCT+TGG | + | chr5.3:78638948-78638967 | MS.gene38210:CDS | 50.0% |
| !! | GCTAATGTGTTGGTGGCACT+TGG | + | chr5.3:78636617-78636636 | MS.gene38210:intron | 50.0% |
| !! | GGAAGAGGTGTTTGGTGTCA+GGG | + | chr5.3:78633687-78633706 | MS.gene38210:intron | 50.0% |
| !! | TGGAAGAGGTGTTTGGTGTC+AGG | + | chr5.3:78633686-78633705 | MS.gene38210:intron | 50.0% |
| ATCCTTCCCAGATGGAGCGT+AGG | - | chr5.3:78636694-78636713 | None:intergenic | 55.0% | |
| CTTAGGGCCTCTTGATCGTC+AGG | - | chr5.3:78638471-78638490 | None:intergenic | 55.0% | |
| GATGCTGACGTGTCAGACAC+TGG | + | chr5.3:78633545-78633564 | MS.gene38210:intron | 55.0% | |
| GCGGATCATGAGGAAACGGT+TGG | + | chr5.3:78637117-78637136 | MS.gene38210:CDS | 55.0% | |
| GGATCCAGCTGAGGCGAAAA+AGG | + | chr5.3:78636062-78636081 | MS.gene38210:CDS | 55.0% | |
| TATGGGTGATCCCGCTAGCA+TGG | + | chr5.3:78638265-78638284 | MS.gene38210:CDS | 55.0% | |
| TGAAGTGGTCGAGCCTACTG+AGG | + | chr5.3:78639043-78639062 | MS.gene38210:CDS | 55.0% | |
| TGTCCCACACTAACACGGGT+TGG | + | chr5.3:78638697-78638716 | MS.gene38210:intron | 55.0% | |
| TTCCTGCCTACGCTCCATCT+GGG | + | chr5.3:78636685-78636704 | MS.gene38210:CDS | 55.0% | |
| ! | GCATGAAGGTGCGGATCATG+AGG | + | chr5.3:78637107-78637126 | MS.gene38210:intron | 55.0% |
| ! | TTGGCAGGTTAGTCGGCTCA+TGG | + | chr5.3:78634155-78634174 | MS.gene38210:intron | 55.0% |
| !! | CTGTCCTTTTTCGCCTCAGC+TGG | - | chr5.3:78636069-78636088 | None:intergenic | 55.0% |
| !! | GCACTTGGTGGTGATGTTGC+AGG | + | chr5.3:78636632-78636651 | MS.gene38210:intron | 55.0% |
| !! | GGTTGATGAGGATCCAGCTG+AGG | + | chr5.3:78636053-78636072 | MS.gene38210:CDS | 55.0% |
| !! | TTTGGTGTCAGGGTCGTGTC+TGG | + | chr5.3:78633697-78633716 | MS.gene38210:intron | 55.0% |
| GAGCTCTTCGCCTTGTGTCC+TGG | + | chr5.3:78638082-78638101 | MS.gene38210:CDS | 60.0% | |
| GTCTCCGCCCTTCTCCGTTA+CGG | + | chr5.3:78633258-78633277 | MS.gene38210:CDS | 60.0% | |
| GTTCCTGCCTACGCTCCATC+TGG | + | chr5.3:78636684-78636703 | MS.gene38210:CDS | 60.0% | |
| TCGCCTTGTGTCCTGGTGTC+AGG | + | chr5.3:78638089-78638108 | MS.gene38210:CDS | 60.0% | |
| TGCCTACGCTCCATCTGGGA+AGG | + | chr5.3:78636689-78636708 | MS.gene38210:CDS | 60.0% | |
| TTCCCAGATGGAGCGTAGGC+AGG | - | chr5.3:78636690-78636709 | None:intergenic | 60.0% | |
| ! | GGTGGTGATGTTGCAGGGTG+AGG | + | chr5.3:78636638-78636657 | MS.gene38210:intron | 60.0% |
| ! | GTAACGGAGAAGGGCGGAGA+CGG | - | chr5.3:78633259-78633278 | None:intergenic | 60.0% |
| !! | GGAGACGGAGGAAGAGCGTT+TGG | - | chr5.3:78633244-78633263 | None:intergenic | 60.0% |
| GTGGTCGAGCCTACTGAGGC+TGG | + | chr5.3:78639047-78639066 | MS.gene38210:CDS | 65.0% | |
| TCCGCCCTTCTCCGTTACGG+CGG | + | chr5.3:78633261-78633280 | MS.gene38210:CDS | 65.0% | |
| ! | TGCGCCGCCGTAACGGAGAA+GGG | - | chr5.3:78633268-78633287 | None:intergenic | 65.0% |
| ACGGAGAAGGGCGGAGACGG+AGG | - | chr5.3:78633256-78633275 | None:intergenic | 70.0% | |
| CGCGAAGTGCGCCGCCGTAA+CGG | - | chr5.3:78633275-78633294 | None:intergenic | 70.0% | |
| CGTTACGGCGGCGCACTTCG+CGG | + | chr5.3:78633273-78633292 | MS.gene38210:CDS | 70.0% | |
| ! | GCCGCCGTAACGGAGAAGGG+CGG | - | chr5.3:78633265-78633284 | None:intergenic | 70.0% |
| ! | GTGCGCCGCCGTAACGGAGA+AGG | - | chr5.3:78633269-78633288 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 78633228 | 78639082 | 78633228 | ID=MS.gene38210 |
| chr5.3 | mRNA | 78633228 | 78639082 | 78633228 | ID=MS.gene38210.t1;Parent=MS.gene38210 |
| chr5.3 | exon | 78633228 | 78633338 | 78633228 | ID=MS.gene38210.t1.exon1;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78633228 | 78633338 | 78633228 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78633902 | 78634081 | 78633902 | ID=MS.gene38210.t1.exon2;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78633902 | 78634081 | 78633902 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78634162 | 78634235 | 78634162 | ID=MS.gene38210.t1.exon3;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78634162 | 78634235 | 78634162 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78634976 | 78635101 | 78634976 | ID=MS.gene38210.t1.exon4;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78634976 | 78635101 | 78634976 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78635180 | 78635273 | 78635180 | ID=MS.gene38210.t1.exon5;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78635180 | 78635273 | 78635180 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78635372 | 78635455 | 78635372 | ID=MS.gene38210.t1.exon6;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78635372 | 78635455 | 78635372 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78635552 | 78635695 | 78635552 | ID=MS.gene38210.t1.exon7;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78635552 | 78635695 | 78635552 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78635800 | 78635913 | 78635800 | ID=MS.gene38210.t1.exon8;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78635800 | 78635913 | 78635800 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78636048 | 78636107 | 78636048 | ID=MS.gene38210.t1.exon9;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78636048 | 78636107 | 78636048 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78636215 | 78636289 | 78636215 | ID=MS.gene38210.t1.exon10;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78636215 | 78636289 | 78636215 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78636382 | 78636486 | 78636382 | ID=MS.gene38210.t1.exon11;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78636382 | 78636486 | 78636382 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78636654 | 78636794 | 78636654 | ID=MS.gene38210.t1.exon12;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78636654 | 78636794 | 78636654 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78636904 | 78636996 | 78636904 | ID=MS.gene38210.t1.exon13;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78636904 | 78636996 | 78636904 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78637115 | 78637192 | 78637115 | ID=MS.gene38210.t1.exon14;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78637115 | 78637192 | 78637115 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78637338 | 78637592 | 78637338 | ID=MS.gene38210.t1.exon15;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78637338 | 78637592 | 78637338 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78637684 | 78637786 | 78637684 | ID=MS.gene38210.t1.exon16;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78637684 | 78637786 | 78637684 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78637967 | 78638141 | 78637967 | ID=MS.gene38210.t1.exon17;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78637967 | 78638141 | 78637967 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78638247 | 78638352 | 78638247 | ID=MS.gene38210.t1.exon18;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78638247 | 78638352 | 78638247 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78638450 | 78638539 | 78638450 | ID=MS.gene38210.t1.exon19;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78638450 | 78638539 | 78638450 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| chr5.3 | exon | 78638912 | 78639082 | 78638912 | ID=MS.gene38210.t1.exon20;Parent=MS.gene38210.t1 |
| chr5.3 | CDS | 78638912 | 78639082 | 78638912 | ID=cds.MS.gene38210.t1;Parent=MS.gene38210.t1 |
| Gene Sequence |
| Protein sequence |
