Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41403.t1 | XP_024625328.1 | 98.6 | 792 | 11 | 0 | 1 | 792 | 1 | 792 | 0.00E+00 | 1489.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41403.t1 | Q9M2E8 | 58.6 | 795 | 302 | 12 | 3 | 789 | 28 | 803 | 4.2e-240 | 832.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41403.t1 | A0A396JYM0 | 98.6 | 792 | 11 | 0 | 1 | 792 | 1 | 792 | 0.0e+00 | 1489.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene41403.t1 | TF | HB-HD-ZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene41403 | 0.82043 | 6.89E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene41403 | 0.815832 | 7.55E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene41403 | 0.833413 | 5.41E-56 | -1.69E-46 |
| MS.gene050397 | MS.gene41403 | 0.806912 | 6.53E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene41403 | 0.818039 | 2.41E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene41403 | 0.801738 | 7.82E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene41403 | 0.822028 | 2.95E-53 | -1.69E-46 |
| MS.gene052178 | MS.gene41403 | 0.841821 | 3.77E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene41403 | 0.803602 | 3.22E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene41403 | 0.819327 | 1.23E-52 | -1.69E-46 |
| MS.gene054010 | MS.gene41403 | 0.830745 | 2.47E-55 | -1.69E-46 |
| MS.gene054011 | MS.gene41403 | 0.848083 | 7.68E-60 | -1.69E-46 |
| MS.gene054012 | MS.gene41403 | 0.840963 | 6.33E-58 | -1.69E-46 |
| MS.gene054013 | MS.gene41403 | 0.840051 | 1.10E-57 | -1.69E-46 |
| MS.gene054214 | MS.gene41403 | 0.802547 | 5.33E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene41403 | 0.83076 | 2.45E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene41403 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene41403 | 0.82938 | 5.32E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene41403 | 0.812638 | 3.83E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene41403 | 0.833486 | 5.19E-56 | -1.69E-46 |
| MS.gene056191 | MS.gene41403 | 0.829812 | 4.17E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene41403 | 0.822962 | 1.79E-53 | -1.69E-46 |
| MS.gene056902 | MS.gene41403 | 0.80138 | 9.25E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene41403 | 0.827415 | 1.58E-54 | -1.69E-46 |
| MS.gene057245 | MS.gene41403 | 0.800396 | 1.47E-48 | -1.69E-46 |
| MS.gene05733 | MS.gene41403 | 0.816762 | 4.68E-52 | -1.69E-46 |
| MS.gene057779 | MS.gene41403 | 0.804901 | 1.73E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene41403 | 0.829924 | 3.92E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene41403 | 0.830818 | 2.37E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene41403 | 0.824323 | 8.59E-54 | -1.69E-46 |
| MS.gene059294 | MS.gene41403 | 0.840743 | 7.23E-58 | -1.69E-46 |
| MS.gene059518 | MS.gene41403 | 0.808286 | 3.34E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene41403 | 0.806036 | 1.00E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene41403 | 0.839955 | 1.16E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene41403 | 0.841547 | 4.45E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41403.t1 | MTR_1g101280 | 98.938 | 753 | 8 | 0 | 40 | 792 | 1 | 753 | 0.0 | 1540 |
| MS.gene41403.t1 | MTR_8g432540 | 64.848 | 788 | 247 | 12 | 14 | 790 | 39 | 807 | 0.0 | 997 |
| MS.gene41403.t1 | MTR_7g076080 | 65.706 | 729 | 221 | 9 | 69 | 790 | 69 | 775 | 0.0 | 976 |
| MS.gene41403.t1 | MTR_0198s0030 | 58.279 | 767 | 293 | 12 | 40 | 792 | 1 | 754 | 0.0 | 874 |
| MS.gene41403.t1 | MTR_2g088470 | 53.678 | 734 | 301 | 10 | 60 | 789 | 34 | 732 | 0.0 | 739 |
| MS.gene41403.t1 | MTR_4g047800 | 51.907 | 734 | 317 | 11 | 60 | 789 | 28 | 729 | 0.0 | 729 |
| MS.gene41403.t1 | MTR_6g477820 | 46.133 | 724 | 349 | 15 | 86 | 789 | 21 | 723 | 0.0 | 628 |
| MS.gene41403.t1 | MTR_5g029320 | 41.351 | 740 | 403 | 16 | 63 | 789 | 57 | 778 | 0.0 | 585 |
| MS.gene41403.t1 | MTR_2g101720 | 41.954 | 696 | 350 | 11 | 99 | 789 | 143 | 789 | 0.0 | 564 |
| MS.gene41403.t1 | MTR_5g005600 | 40.327 | 734 | 388 | 15 | 68 | 789 | 21 | 716 | 3.90e-176 | 523 |
| MS.gene41403.t1 | MTR_7g427710 | 41.713 | 712 | 313 | 21 | 93 | 789 | 14 | 638 | 2.46e-167 | 498 |
| MS.gene41403.t1 | MTR_2g030570 | 33.700 | 727 | 422 | 18 | 81 | 789 | 11 | 695 | 2.03e-127 | 397 |
| MS.gene41403.t1 | MTR_2g030600 | 32.780 | 723 | 427 | 18 | 81 | 789 | 11 | 688 | 1.62e-117 | 371 |
| MS.gene41403.t1 | MTR_2g030660 | 31.850 | 719 | 407 | 21 | 80 | 789 | 3 | 647 | 2.13e-97 | 317 |
| MS.gene41403.t1 | MTR_7g427690 | 40.500 | 400 | 203 | 12 | 273 | 662 | 38 | 412 | 2.82e-90 | 292 |
| MS.gene41403.t1 | MTR_2g083330 | 34.026 | 529 | 288 | 12 | 301 | 789 | 18 | 525 | 1.75e-82 | 274 |
| MS.gene41403.t1 | MTR_2g083350 | 33.522 | 531 | 291 | 13 | 301 | 789 | 21 | 531 | 4.14e-82 | 273 |
| MS.gene41403.t1 | MTR_7g427700 | 35.976 | 328 | 141 | 8 | 93 | 413 | 14 | 279 | 1.72e-52 | 189 |
| MS.gene41403.t1 | MTR_7g427700 | 45.625 | 160 | 73 | 5 | 635 | 789 | 281 | 431 | 1.40e-28 | 120 |
| MS.gene41403.t1 | MTR_0653s0020 | 45.503 | 189 | 84 | 6 | 478 | 664 | 1 | 172 | 2.67e-44 | 159 |
| MS.gene41403.t1 | MTR_5g046040 | 46.067 | 178 | 90 | 3 | 90 | 263 | 28 | 203 | 1.18e-40 | 154 |
| MS.gene41403.t1 | MTR_7g027265 | 53.333 | 120 | 56 | 0 | 95 | 214 | 17 | 136 | 3.44e-37 | 136 |
| MS.gene41403.t1 | MTR_2g030690 | 31.864 | 295 | 177 | 9 | 501 | 789 | 1 | 277 | 2.10e-30 | 122 |
| MS.gene41403.t1 | MTR_1g105420 | 31.905 | 210 | 105 | 5 | 150 | 351 | 1 | 180 | 8.41e-22 | 95.1 |
| MS.gene41403.t1 | MTR_0653s0010 | 46.094 | 128 | 45 | 4 | 674 | 790 | 1 | 115 | 4.81e-21 | 89.7 |
| MS.gene41403.t1 | MTR_6g027290 | 31.875 | 160 | 100 | 2 | 79 | 233 | 9 | 164 | 8.63e-20 | 87.8 |
| MS.gene41403.t1 | MTR_7g027605 | 41.304 | 92 | 52 | 2 | 384 | 475 | 2 | 91 | 3.34e-18 | 80.5 |
| MS.gene41403.t1 | MTR_2g451350 | 28.244 | 131 | 93 | 1 | 309 | 438 | 1 | 131 | 1.88e-15 | 74.3 |
| MS.gene41403.t1 | MTR_7g427670 | 40.816 | 98 | 42 | 2 | 149 | 246 | 32 | 113 | 9.31e-14 | 68.9 |
| MS.gene41403.t1 | MTR_2g030720 | 30.137 | 146 | 87 | 3 | 99 | 244 | 22 | 152 | 6.56e-13 | 67.8 |
| MS.gene41403.t1 | MTR_1g061660 | 38.679 | 106 | 54 | 4 | 91 | 189 | 55 | 156 | 1.21e-11 | 65.9 |
| MS.gene41403.t1 | MTR_2g101740 | 59.091 | 44 | 18 | 0 | 746 | 789 | 26 | 69 | 7.32e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41403.t1 | AT4G00730 | 63.108 | 740 | 239 | 9 | 51 | 790 | 94 | 799 | 0.0 | 917 |
| MS.gene41403.t1 | AT3G61150 | 58.435 | 818 | 271 | 15 | 1 | 789 | 26 | 803 | 0.0 | 906 |
| MS.gene41403.t1 | AT4G04890 | 51.558 | 770 | 331 | 13 | 27 | 789 | 1 | 735 | 0.0 | 771 |
| MS.gene41403.t1 | AT4G04890 | 51.558 | 770 | 331 | 13 | 27 | 789 | 1 | 735 | 0.0 | 771 |
| MS.gene41403.t1 | AT5G52170 | 51.905 | 761 | 276 | 14 | 40 | 791 | 1 | 680 | 0.0 | 748 |
| MS.gene41403.t1 | AT5G52170 | 51.905 | 761 | 276 | 14 | 40 | 791 | 1 | 680 | 0.0 | 748 |
| MS.gene41403.t1 | AT5G52170 | 51.567 | 766 | 276 | 15 | 40 | 791 | 1 | 685 | 0.0 | 743 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT1G05230 | 51.351 | 740 | 308 | 12 | 54 | 789 | 25 | 716 | 0.0 | 741 |
| MS.gene41403.t1 | AT4G21750 | 49.242 | 792 | 338 | 13 | 27 | 789 | 1 | 757 | 0.0 | 734 |
| MS.gene41403.t1 | AT4G21750 | 49.242 | 792 | 338 | 13 | 27 | 789 | 1 | 757 | 0.0 | 734 |
| MS.gene41403.t1 | AT4G21750 | 49.242 | 792 | 338 | 13 | 27 | 789 | 1 | 757 | 0.0 | 734 |
| MS.gene41403.t1 | AT4G21750 | 49.242 | 792 | 338 | 13 | 27 | 789 | 1 | 757 | 0.0 | 734 |
| MS.gene41403.t1 | AT1G05230 | 51.216 | 740 | 307 | 13 | 54 | 789 | 25 | 714 | 0.0 | 733 |
| MS.gene41403.t1 | AT1G73360 | 46.273 | 711 | 339 | 14 | 94 | 789 | 31 | 713 | 0.0 | 607 |
| MS.gene41403.t1 | AT1G05230 | 50.325 | 616 | 265 | 11 | 54 | 665 | 25 | 603 | 0.0 | 606 |
| MS.gene41403.t1 | AT4G00730 | 60.852 | 493 | 166 | 7 | 51 | 543 | 94 | 559 | 0.0 | 591 |
| MS.gene41403.t1 | AT1G17920 | 44.587 | 702 | 335 | 14 | 98 | 789 | 24 | 681 | 0.0 | 585 |
| MS.gene41403.t1 | AT1G17920 | 44.587 | 702 | 335 | 14 | 98 | 789 | 24 | 681 | 0.0 | 585 |
| MS.gene41403.t1 | AT2G32370 | 40.028 | 727 | 377 | 12 | 70 | 786 | 40 | 717 | 0.0 | 545 |
| MS.gene41403.t1 | AT1G79840 | 39.860 | 715 | 358 | 15 | 87 | 791 | 34 | 686 | 3.95e-177 | 525 |
| MS.gene41403.t1 | AT1G79840 | 39.860 | 715 | 358 | 15 | 87 | 791 | 34 | 686 | 3.95e-177 | 525 |
| MS.gene41403.t1 | AT1G79840 | 39.860 | 715 | 358 | 15 | 87 | 791 | 92 | 744 | 9.52e-177 | 526 |
| MS.gene41403.t1 | AT1G79840 | 39.860 | 715 | 358 | 15 | 87 | 791 | 121 | 773 | 9.19e-176 | 525 |
| MS.gene41403.t1 | AT5G46880 | 39.757 | 742 | 388 | 19 | 79 | 789 | 93 | 806 | 1.67e-171 | 515 |
| MS.gene41403.t1 | AT5G46880 | 39.757 | 742 | 388 | 19 | 79 | 789 | 93 | 806 | 1.67e-171 | 515 |
| MS.gene41403.t1 | AT5G46880 | 39.757 | 742 | 388 | 19 | 79 | 789 | 93 | 806 | 1.67e-171 | 515 |
| MS.gene41403.t1 | AT4G25530 | 39.028 | 720 | 367 | 15 | 76 | 789 | 29 | 682 | 1.72e-164 | 493 |
| MS.gene41403.t1 | AT1G79840 | 40.000 | 585 | 285 | 13 | 87 | 661 | 92 | 620 | 7.51e-143 | 435 |
| MS.gene41403.t1 | AT3G03260 | 34.060 | 734 | 415 | 17 | 79 | 789 | 7 | 694 | 2.10e-136 | 420 |
| MS.gene41403.t1 | AT4G17710 | 34.907 | 699 | 368 | 16 | 95 | 789 | 88 | 703 | 2.47e-129 | 402 |
| MS.gene41403.t1 | AT5G17320 | 34.008 | 741 | 439 | 22 | 74 | 790 | 2 | 716 | 2.76e-122 | 384 |
| MS.gene41403.t1 | AT1G34650 | 32.642 | 723 | 440 | 16 | 85 | 789 | 12 | 705 | 2.44e-113 | 360 |
| MS.gene41403.t1 | AT3G03260 | 33.692 | 558 | 329 | 13 | 79 | 627 | 7 | 532 | 1.19e-101 | 324 |
| MS.gene41403.t1 | AT1G79840 | 38.013 | 463 | 223 | 11 | 87 | 540 | 92 | 499 | 1.20e-98 | 316 |
| MS.gene41403.t1 | AT5G07260 | 25.841 | 565 | 335 | 16 | 160 | 722 | 9 | 491 | 1.04e-48 | 181 |
| MS.gene41403.t1 | AT5G07260 | 26.018 | 565 | 329 | 16 | 160 | 722 | 9 | 486 | 1.42e-48 | 181 |
| MS.gene41403.t1 | AT1G30490 | 37.255 | 102 | 55 | 3 | 81 | 178 | 6 | 102 | 4.46e-11 | 67.0 |
Find 0 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACAAAAAGAAATAAAA+TGG | - | 11333:48191-48210 | MS.gene41403:intergenic | 10.0% |
| !!! | TTATTAATCTTTATTGTTTT+TGG | + | 11333:47841-47860 | MS.gene41403:intron | 10.0% |
| !! | AAAATAAACAAGTAAAATTC+TGG | + | 11333:48334-48353 | MS.gene41403:CDS | 15.0% |
| !! | ATCTGTCTAATTATATTAAA+AGG | - | 11333:50382-50401 | MS.gene41403:intergenic | 15.0% |
| !! | GAATGCTATATAAAATATAA+TGG | + | 11333:50332-50351 | MS.gene41403:intron | 15.0% |
| !!! | AAACAAATATTTTATACTAC+AGG | - | 11333:50265-50284 | MS.gene41403:intergenic | 15.0% |
| !!! | ATTAATTTATAATTAGCCTA+GGG | + | 11333:50533-50552 | MS.gene41403:intron | 15.0% |
| !!! | TAATCTTATATCTTGTTTTA+TGG | + | 11333:47817-47836 | MS.gene41403:intron | 15.0% |
| !!! | TATTAATTTATAATTAGCCT+AGG | + | 11333:50532-50551 | MS.gene41403:intron | 15.0% |
| !!! | TTTTAAAAGAAAATGAAACA+TGG | - | 11333:48401-48420 | MS.gene41403:intergenic | 15.0% |
| !!! | TTTTTGTTATTAAACTAATG+TGG | + | 11333:48200-48219 | MS.gene41403:intron | 15.0% |
| !! | AATAGAATAAGGTTGAAATA+AGG | + | 11333:49982-50001 | MS.gene41403:intron | 20.0% |
| !! | ACAAAATTTCCTATCAAAAT+CGG | - | 11333:49360-49379 | MS.gene41403:intergenic | 20.0% |
| !! | CTAATTAAATGGTGTAAATT+TGG | + | 11333:50883-50902 | MS.gene41403:intron | 20.0% |
| !! | CTTGTTAACTACTAATTAAA+TGG | + | 11333:50872-50891 | MS.gene41403:intron | 20.0% |
| !! | TATGGATGAATTATTAAAGA+TGG | + | 11333:49097-49116 | MS.gene41403:CDS | 20.0% |
| !! | TGCTATATCTAAATAGAATA+AGG | + | 11333:49971-49990 | MS.gene41403:intron | 20.0% |
| !! | TTTCATGATCTTTGATATTA+TGG | - | 11333:48509-48528 | MS.gene41403:intergenic | 20.0% |
| !!! | AGTTTTTTTACTTGTTTACT+TGG | + | 11333:50037-50056 | MS.gene41403:intron | 20.0% |
| !!! | ATACTTTTCTTGAATAGAAT+CGG | + | 11333:49469-49488 | MS.gene41403:intron | 20.0% |
| !!! | GTTTTTTTACTTGTTTACTT+GGG | + | 11333:50038-50057 | MS.gene41403:intron | 20.0% |
| !!! | TGCATGAAAATTTTAAATCT+TGG | + | 11333:50186-50205 | MS.gene41403:intron | 20.0% |
| ! | AAAATAAGTTGCATTGTTGT+AGG | + | 11333:50627-50646 | MS.gene41403:intron | 25.0% |
| ! | ATATTGAATCAAGAAGAGTA+TGG | + | 11333:49170-49189 | MS.gene41403:CDS | 25.0% |
| ! | ATTTAATCTTCACCTTCATT+TGG | - | 11333:48377-48396 | MS.gene41403:intergenic | 25.0% |
| ! | CGTATGTAAGATGTTTATAT+AGG | - | 11333:50511-50530 | MS.gene41403:intergenic | 25.0% |
| ! | GCTATAGAGATTTCATAAAT+AGG | + | 11333:51330-51349 | MS.gene41403:intron | 25.0% |
| ! | TGAAACTTCATATATCTGTT+TGG | + | 11333:50143-50162 | MS.gene41403:intron | 25.0% |
| ! | TTTAATCTTCACCTTCATTT+GGG | - | 11333:48376-48395 | MS.gene41403:intergenic | 25.0% |
| !! | ACGTATGATTTGGATTTAAA+TGG | - | 11333:51308-51327 | MS.gene41403:intergenic | 25.0% |
| !! | ATTTTGCATTGAACTAGAAA+AGG | - | 11333:47769-47788 | MS.gene41403:intergenic | 25.0% |
| !! | GATGTGTTTTCTTCTTTTAA+TGG | + | 11333:48233-48252 | MS.gene41403:intron | 25.0% |
| !! | TTTTCTACAGCAAAGAAAAA+TGG | + | 11333:47930-47949 | MS.gene41403:intron | 25.0% |
| !! | TTTTGCATTGAACTAGAAAA+GGG | - | 11333:47768-47787 | MS.gene41403:intergenic | 25.0% |
| !!! | GTAATTTAACCGATTTTGAT+AGG | + | 11333:49348-49367 | MS.gene41403:intron | 25.0% |
| AAATTACAAAGAAGACCAAG+AGG | - | 11333:49335-49354 | MS.gene41403:intergenic | 30.0% | |
| AAATTGATACAGATGTCAGA+AGG | - | 11333:50472-50491 | MS.gene41403:intergenic | 30.0% | |
| AATCCAATATGTAACAACTG+TGG | + | 11333:48717-48736 | MS.gene41403:CDS | 30.0% | |
| CTATATCACTCAGAAAATGT+TGG | - | 11333:49385-49404 | MS.gene41403:intergenic | 30.0% | |
| TAAAACTTACATTAGCACGA+AGG | - | 11333:51280-51299 | MS.gene41403:intergenic | 30.0% | |
| TATAATTGCAACGAGTATGT+TGG | + | 11333:50594-50613 | MS.gene41403:intron | 30.0% | |
| TCAAATGGTACTTTACAGAA+AGG | + | 11333:51709-51728 | MS.gene41403:CDS | 30.0% | |
| TCAAGCTCTTGAATTTGATT+AGG | - | 11333:48144-48163 | MS.gene41403:intergenic | 30.0% | |
| TCTATAGCTAACGTATGATT+TGG | - | 11333:51318-51337 | MS.gene41403:intergenic | 30.0% | |
| TCTCATAAAACCAACTTACA+AGG | - | 11333:51379-51398 | MS.gene41403:intergenic | 30.0% | |
| TTATCAAATACTCAACCTCT+TGG | + | 11333:49317-49336 | MS.gene41403:intron | 30.0% | |
| TTATGAGATTGAGTTAGGAT+CGG | + | 11333:51391-51410 | MS.gene41403:intron | 30.0% | |
| TTTGATCTTGAAGGATTATC+TGG | + | 11333:48054-48073 | MS.gene41403:CDS | 30.0% | |
| ! | AAAGGGTATAGAAATATCAG+TGG | - | 11333:47751-47770 | MS.gene41403:intergenic | 30.0% |
| ! | ACTGTTGATTATTACTATCC+CGG | - | 11333:49261-49280 | MS.gene41403:intergenic | 30.0% |
| ! | ATTAAACTAATGTGGTTCTG+TGG | + | 11333:48208-48227 | MS.gene41403:intron | 30.0% |
| ! | TACCAAAAAACTGATTTCTC+AGG | - | 11333:50018-50037 | MS.gene41403:intergenic | 30.0% |
| ! | TGTTTGTTAAGGCACATATA+CGG | - | 11333:48824-48843 | MS.gene41403:intergenic | 30.0% |
| ! | TTTTTAATGTCTTCGCAACA+AGG | + | 11333:48454-48473 | MS.gene41403:intron | 30.0% |
| !! | AAGAAATGGTGCTATACATT+TGG | + | 11333:49566-49585 | MS.gene41403:CDS | 30.0% |
| !! | TTGGATTTGATTTTGCATGT+TGG | + | 11333:47860-47879 | MS.gene41403:intron | 30.0% |
| !!! | CTTATTTCTGGTTTTGGATT+TGG | + | 11333:50712-50731 | MS.gene41403:CDS | 30.0% |
| !!! | GGTTTTTTGTAGTTTCTTCA+AGG | + | 11333:48254-48273 | MS.gene41403:intron | 30.0% |
| !!! | TGGTTTTATGAGATTGAGTT+AGG | + | 11333:51386-51405 | MS.gene41403:intron | 30.0% |
| AAACAATCCTCCTTGTAAGT+TGG | + | 11333:51366-51385 | MS.gene41403:intron | 35.0% | |
| AAATGTTGACATAATGCCCT+AGG | - | 11333:50552-50571 | MS.gene41403:intergenic | 35.0% | |
| AAGATCAAAGTTATCGCTTC+CGG | - | 11333:48043-48062 | MS.gene41403:intergenic | 35.0% | |
| AATCAACAGTTTAGCACTTG+TGG | + | 11333:49271-49290 | MS.gene41403:CDS | 35.0% | |
| AATGGTACTTTACAGAAAGG+TGG | + | 11333:51712-51731 | MS.gene41403:CDS | 35.0% | |
| ACAGTTGAGAAGAAAGAAGA+TGG | - | 11333:47792-47811 | MS.gene41403:intergenic | 35.0% | |
| ACCAGATAAAACATCAAGGT+TGG | - | 11333:49532-49551 | MS.gene41403:intergenic | 35.0% | |
| AGATAGTCCTGTTTGGATTA+AGG | + | 11333:49127-49146 | MS.gene41403:CDS | 35.0% | |
| AGCGATAACTTTGATCTTGA+AGG | + | 11333:48045-48064 | MS.gene41403:CDS | 35.0% | |
| AGGAAAATGACAAGCTAAGA+GGG | + | 11333:48664-48683 | MS.gene41403:CDS | 35.0% | |
| AGTCTTCTACAGCTTATGAA+TGG | - | 11333:49817-49836 | MS.gene41403:intergenic | 35.0% | |
| ATGAATGGTTGTGCATTAGA+AGG | - | 11333:49802-49821 | MS.gene41403:intergenic | 35.0% | |
| ATGACATGAGAGTTATGACT+AGG | + | 11333:51048-51067 | MS.gene41403:CDS | 35.0% | |
| ATTACCATCAAAGTTTCTGC+AGG | + | 11333:49418-49437 | MS.gene41403:intron | 35.0% | |
| CATAAAACCAACTTACAAGG+AGG | - | 11333:51376-51395 | MS.gene41403:intergenic | 35.0% | |
| CCAAAACCAGAAATAAGCAA+CGG | - | 11333:50709-50728 | MS.gene41403:intergenic | 35.0% | |
| CCTGCAAAAACAAAGATTCT+TGG | - | 11333:51489-51508 | MS.gene41403:intergenic | 35.0% | |
| CTACAGCAAAGAAAAATGGA+GGG | + | 11333:47934-47953 | MS.gene41403:intron | 35.0% | |
| CTCATCCTGATGAAAAACAA+AGG | + | 11333:48283-48302 | MS.gene41403:CDS | 35.0% | |
| GAAGACTATTCACCAGAATT+TGG | - | 11333:51777-51796 | MS.gene41403:intergenic | 35.0% | |
| GATAGTCCTGTTTGGATTAA+GGG | + | 11333:49128-49147 | MS.gene41403:CDS | 35.0% | |
| TACAGCAAAGAAAAATGGAG+GGG | + | 11333:47935-47954 | MS.gene41403:intron | 35.0% | |
| TAGCATGATGAAAGAAGCAA+TGG | + | 11333:48692-48711 | MS.gene41403:CDS | 35.0% | |
| TCCTAGAGATTAGTGAATCA+AGG | + | 11333:50103-50122 | MS.gene41403:intron | 35.0% | |
| TCCTGATGAAAAACAAAGGT+TGG | + | 11333:48287-48306 | MS.gene41403:CDS | 35.0% | |
| TCTACAGCAAAGAAAAATGG+AGG | + | 11333:47933-47952 | MS.gene41403:intron | 35.0% | |
| TGCTTCATCTGCTAGAAAAT+GGG | + | 11333:50998-51017 | MS.gene41403:CDS | 35.0% | |
| TGGAGAATCACAAACAAATG+CGG | - | 11333:48489-48508 | MS.gene41403:intergenic | 35.0% | |
| TGGCAAACCAATATCATCAT+TGG | + | 11333:48851-48870 | MS.gene41403:CDS | 35.0% | |
| TTCCACCAGATAAAACATCA+AGG | - | 11333:49536-49555 | MS.gene41403:intergenic | 35.0% | |
| TTTGTTGAATCAGACTCAAC+TGG | + | 11333:48614-48633 | MS.gene41403:intron | 35.0% | |
| ! | AACCTTGATGTTTTATCTGG+TGG | + | 11333:49531-49550 | MS.gene41403:CDS | 35.0% |
| ! | CGGTTGATTTCTTCTTGTAT+TGG | + | 11333:49194-49213 | MS.gene41403:CDS | 35.0% |
| ! | GATGTTTTATCTGGTGGAAT+CGG | + | 11333:49537-49556 | MS.gene41403:CDS | 35.0% |
| ! | GTTGATGTTTCTGTTGAGAT+TGG | + | 11333:49769-49788 | MS.gene41403:CDS | 35.0% |
| ! | TGAATCAAGAAGAGTATGGA+CGG | + | 11333:49174-49193 | MS.gene41403:CDS | 35.0% |
| ! | TTGATTTTCTGCGTGATGAA+AGG | + | 11333:51159-51178 | MS.gene41403:CDS | 35.0% |
| !! | ATGATGATATTGGTTTGCCA+AGG | - | 11333:48851-48870 | MS.gene41403:intergenic | 35.0% |
| !! | ATTGAGTTAGGATCGGTTTT+GGG | + | 11333:51398-51417 | MS.gene41403:intron | 35.0% |
| !! | GGATTAGCCAATGATGATAT+TGG | - | 11333:48861-48880 | MS.gene41403:intergenic | 35.0% |
| !! | TGTTGATTCTGCAAGAAACT+TGG | + | 11333:51533-51552 | MS.gene41403:CDS | 35.0% |
| !!! | CCAAGAATCTTTGTTTTTGC+AGG | + | 11333:51486-51505 | MS.gene41403:intron | 35.0% |
| !!! | CTTTGTTTTTCATCAGGATG+AGG | - | 11333:48285-48304 | MS.gene41403:intergenic | 35.0% |
| !!! | TCCAACCTTTGTTTTTCATC+AGG | - | 11333:48291-48310 | MS.gene41403:intergenic | 35.0% |
| !!! | TGCCTGAGAAATCAGTTTTT+TGG | + | 11333:50013-50032 | MS.gene41403:intron | 35.0% |
| AACAGTCTTTGTCGTGAAAC+TGG | - | 11333:51140-51159 | MS.gene41403:intergenic | 40.0% | |
| AAGTTCCAGACCAGAATTTG+AGG | - | 11333:48898-48917 | MS.gene41403:intergenic | 40.0% | |
| AATATTTGGCCAGGAATTGC+TGG | - | 11333:48747-48766 | MS.gene41403:intergenic | 40.0% | |
| AATGTGAACCATCTCTTGCA+TGG | - | 11333:51222-51241 | MS.gene41403:intergenic | 40.0% | |
| AATTGAAAACGCCCGTCTAA+AGG | + | 11333:48788-48807 | MS.gene41403:CDS | 40.0% | |
| ACGTGTATTAGCACTTACCT+TGG | - | 11333:49881-49900 | MS.gene41403:intergenic | 40.0% | |
| AGCACTTGTGGAAACTTTGA+TGG | + | 11333:49283-49302 | MS.gene41403:CDS | 40.0% | |
| AGTTCACCAATGGGATTGAT+GGG | + | 11333:49017-49036 | MS.gene41403:CDS | 40.0% | |
| ATCTCAAACGATGATCACAC+GGG | + | 11333:50802-50821 | MS.gene41403:CDS | 40.0% | |
| ATGACCAACAACTTCTGTTC+TGG | + | 11333:50969-50988 | MS.gene41403:CDS | 40.0% | |
| ATGTGAACCATCTCTTGCAT+GGG | - | 11333:51221-51240 | MS.gene41403:intergenic | 40.0% | |
| ATTGTGCAGGATATGCCAAA+TGG | + | 11333:49850-49869 | MS.gene41403:CDS | 40.0% | |
| CAAACCTGCAGAAACTTTGA+TGG | - | 11333:49425-49444 | MS.gene41403:intergenic | 40.0% | |
| CAGGAAAATGACAAGCTAAG+AGG | + | 11333:48663-48682 | MS.gene41403:CDS | 40.0% | |
| CATCTCAAACGATGATCACA+CGG | + | 11333:50801-50820 | MS.gene41403:CDS | 40.0% | |
| CCAATATGTAACAACTGTGG+TGG | + | 11333:48720-48739 | MS.gene41403:CDS | 40.0% | |
| CCACCACAGTTGTTACATAT+TGG | - | 11333:48723-48742 | MS.gene41403:intergenic | 40.0% | |
| CCTGGTATTAGTTCACCAAT+GGG | + | 11333:49008-49027 | MS.gene41403:CDS | 40.0% | |
| CTATAATCTGCCAAGTGTGT+CGG | + | 11333:50433-50452 | MS.gene41403:intron | 40.0% | |
| CTCAACAGAAACATCAACCA+CGG | - | 11333:49767-49786 | MS.gene41403:intergenic | 40.0% | |
| CTGCACTTAGAGTTGCATAA+CGG | + | 11333:51872-51891 | MS.gene41403:CDS | 40.0% | |
| CTTACCTTGGAGTAACCATT+TGG | - | 11333:49868-49887 | MS.gene41403:intergenic | 40.0% | |
| GATTCTGCAAGAAACTTGGA+TGG | + | 11333:51537-51556 | MS.gene41403:CDS | 40.0% | |
| GCAATTTCAGATGCATACTG+AGG | + | 11333:49660-49679 | MS.gene41403:intron | 40.0% | |
| GCCTTAACAAACAAGTTCCT+TGG | + | 11333:48831-48850 | MS.gene41403:CDS | 40.0% | |
| GCCTTGATTCACTAATCTCT+AGG | - | 11333:50107-50126 | MS.gene41403:intergenic | 40.0% | |
| GGAAAATGACAAGCTAAGAG+GGG | + | 11333:48665-48684 | MS.gene41403:CDS | 40.0% | |
| GGCATGAGAACATAATGCTT+AGG | + | 11333:48640-48659 | MS.gene41403:CDS | 40.0% | |
| GGTGCTCTTCGAACAATATT+TGG | - | 11333:48761-48780 | MS.gene41403:intergenic | 40.0% | |
| GGTTCAATTCGTCCTTTAGA+CGG | - | 11333:48803-48822 | MS.gene41403:intergenic | 40.0% | |
| GTGCTTCATCTGCTAGAAAA+TGG | + | 11333:50997-51016 | MS.gene41403:CDS | 40.0% | |
| GTTCAATTCGTCCTTTAGAC+GGG | - | 11333:48802-48821 | MS.gene41403:intergenic | 40.0% | |
| GTTTGGATTAAGGGTTTGGA+TGG | + | 11333:49137-49156 | MS.gene41403:CDS | 40.0% | |
| TACAGATGTCAGAAGGATAG+AGG | - | 11333:50465-50484 | MS.gene41403:intergenic | 40.0% | |
| TAGTAAGCTCTTGCAAACCA+AGG | - | 11333:49633-49652 | MS.gene41403:intergenic | 40.0% | |
| TAGTTCACCAATGGGATTGA+TGG | + | 11333:49016-49035 | MS.gene41403:CDS | 40.0% | |
| TATAATCTGCCAAGTGTGTC+GGG | + | 11333:50434-50453 | MS.gene41403:intron | 40.0% | |
| TATCGTCCGTTGCTTATTTC+TGG | + | 11333:50700-50719 | MS.gene41403:CDS | 40.0% | |
| TATGCCAAATGGTTACTCCA+AGG | + | 11333:49861-49880 | MS.gene41403:CDS | 40.0% | |
| TCCAAACCCTTAATCCAAAC+AGG | - | 11333:49137-49156 | MS.gene41403:intergenic | 40.0% | |
| TCCTGTTTGGATTAAGGGTT+TGG | + | 11333:49133-49152 | MS.gene41403:CDS | 40.0% | |
| TCTTCGAACAATATTTGGCC+AGG | - | 11333:48756-48775 | MS.gene41403:intergenic | 40.0% | |
| TGAATCAGACTCAACTGGAA+AGG | + | 11333:48619-48638 | MS.gene41403:intron | 40.0% | |
| TGACCAACAACTTCTGTTCT+GGG | + | 11333:50970-50989 | MS.gene41403:CDS | 40.0% | |
| TGAGAACATAATGCTTAGGC+AGG | + | 11333:48644-48663 | MS.gene41403:CDS | 40.0% | |
| TGATGTTCAGCTTGAGAGAT+CGG | + | 11333:49049-49068 | MS.gene41403:CDS | 40.0% | |
| TTCACATTGCCAAAGGTCAA+GGG | + | 11333:51234-51253 | MS.gene41403:CDS | 40.0% | |
| TTCGTCAAGTGAGAATCCTT+CGG | + | 11333:49710-49729 | MS.gene41403:CDS | 40.0% | |
| TTGCATTGTTGTAGGTCACT+TGG | + | 11333:50635-50654 | MS.gene41403:intron | 40.0% | |
| TTGGATCTTAGCAAGAGACT+TGG | + | 11333:48306-48325 | MS.gene41403:CDS | 40.0% | |
| TTGGATGGATACATCTTGCT+CGG | + | 11333:51552-51571 | MS.gene41403:CDS | 40.0% | |
| ! | AAGTTTGCTTCAATGTGCCT+TGG | + | 11333:49613-49632 | MS.gene41403:intron | 40.0% |
| ! | AGCTTAGATACTAGTCTGCT+TGG | + | 11333:47985-48004 | MS.gene41403:CDS | 40.0% |
| ! | AGGATTATCTGGTGATGATC+AGG | + | 11333:48065-48084 | MS.gene41403:CDS | 40.0% |
| ! | ATCATCATTGGCTAATCCCA+TGG | + | 11333:48863-48882 | MS.gene41403:CDS | 40.0% |
| ! | ATCATCGTTTGAGATGGAAG+AGG | - | 11333:50797-50816 | MS.gene41403:intergenic | 40.0% |
| ! | GAACTTGGTATTGGAAGGAA+CGG | + | 11333:48912-48931 | MS.gene41403:CDS | 40.0% |
| ! | GAGTGGGACATTTTGTCTAA+TGG | + | 11333:51191-51210 | MS.gene41403:CDS | 40.0% |
| ! | GCCAACCTTGATGTTTTATC+TGG | + | 11333:49528-49547 | MS.gene41403:CDS | 40.0% |
| ! | GCCAAGGAACTTGTTTGTTA+AGG | - | 11333:48835-48854 | MS.gene41403:intergenic | 40.0% |
| ! | GCTTAGATACTAGTCTGCTT+GGG | + | 11333:47986-48005 | MS.gene41403:CDS | 40.0% |
| ! | GGCTCTAATAGATCTTGCAT+TGG | + | 11333:49070-49089 | MS.gene41403:CDS | 40.0% |
| ! | GGGCGTTTTCAATTCTAATC+TGG | - | 11333:48782-48801 | MS.gene41403:intergenic | 40.0% |
| ! | TAGAAGAAGCATGTTGAAGC+TGG | + | 11333:50938-50957 | MS.gene41403:CDS | 40.0% |
| ! | TCAAATTCTGGTCTGGAACT+TGG | + | 11333:48897-48916 | MS.gene41403:CDS | 40.0% |
| ! | TCATTGAATGTGGTGATGAG+TGG | + | 11333:51604-51623 | MS.gene41403:CDS | 40.0% |
| ! | TCTTAGCAAGAGACTTGGTT+TGG | + | 11333:48311-48330 | MS.gene41403:CDS | 40.0% |
| ! | TGCAGCTTTGATCTTCTGAA+TGG | - | 11333:51857-51876 | MS.gene41403:intergenic | 40.0% |
| ! | TGGGACATTTTGTCTAATGG+TGG | + | 11333:51194-51213 | MS.gene41403:CDS | 40.0% |
| ! | TGTGGAAACTTTGATGGATG+CGG | + | 11333:49289-49308 | MS.gene41403:CDS | 40.0% |
| ! | TTATCTGGTGATGATCAGGA+TGG | + | 11333:48069-48088 | MS.gene41403:CDS | 40.0% |
| ! | TTTGATTAGGAGTGTGTCTG+TGG | - | 11333:48131-48150 | MS.gene41403:intergenic | 40.0% |
| !! | AGGAAAAATGTTGATGACCC+TGG | + | 11333:51068-51087 | MS.gene41403:CDS | 40.0% |
| !! | ATCTCTAGGAGTACTAGAAG+TGG | - | 11333:50093-50112 | MS.gene41403:intergenic | 40.0% |
| !! | GATTGAGTTAGGATCGGTTT+TGG | + | 11333:51397-51416 | MS.gene41403:intron | 40.0% |
| !! | TTGGTTTGCAAGAGCTTACT+AGG | + | 11333:49632-49651 | MS.gene41403:intron | 40.0% |
| !!! | CCGTTGCTTATTTCTGGTTT+TGG | + | 11333:50706-50725 | MS.gene41403:CDS | 40.0% |
| AAAATGGGACAGCCTCCAAA+TGG | + | 11333:51013-51032 | MS.gene41403:CDS | 45.0% | |
| AAATGGGACAGCCTCCAAAT+GGG | + | 11333:51014-51033 | MS.gene41403:CDS | 45.0% | |
| AACCCCAGAACAGAAGTTGT+TGG | - | 11333:50976-50995 | MS.gene41403:intergenic | 45.0% | |
| ACATGCTTCTTCTACCAGCT+TGG | - | 11333:50932-50951 | MS.gene41403:intergenic | 45.0% | |
| ACCATCCTCAAATTCTGGTC+TGG | + | 11333:48890-48909 | MS.gene41403:CDS | 45.0% | |
| ACTTTACAGAAAGGTGGTGC+TGG | + | 11333:51718-51737 | MS.gene41403:CDS | 45.0% | |
| AGATCAAGTCCCATTGGCAA+AGG | - | 11333:48969-48988 | MS.gene41403:intergenic | 45.0% | |
| AGCTGTAGAAGACTTCCTTC+TGG | + | 11333:49823-49842 | MS.gene41403:CDS | 45.0% | |
| AGGATTCTCACTTGACGAAC+CGG | - | 11333:49709-49728 | MS.gene41403:intergenic | 45.0% | |
| ATGAAAGGCTTAGAAGCGAG+TGG | + | 11333:51174-51193 | MS.gene41403:CDS | 45.0% | |
| ATTGCTTTCACCACTAGTCC+CGG | + | 11333:49687-49706 | MS.gene41403:CDS | 45.0% | |
| ATTTGAGGATGGTAGAGCCA+TGG | - | 11333:48883-48902 | MS.gene41403:intergenic | 45.0% | |
| CAATCTGAGTTGCGGCATTA+AGG | + | 11333:48431-48450 | MS.gene41403:intron | 45.0% | |
| CACAGTCGGATTCCAAATTC+TGG | + | 11333:51762-51781 | MS.gene41403:CDS | 45.0% | |
| CATTGGCAAAGGATTGCCAA+GGG | - | 11333:48958-48977 | MS.gene41403:intergenic | 45.0% | |
| CCCATTGGTGAACTAATACC+AGG | - | 11333:49011-49030 | MS.gene41403:intergenic | 45.0% | |
| CGCAACTCAGATTGTGATTG+CGG | - | 11333:48425-48444 | MS.gene41403:intergenic | 45.0% | |
| CGCAATCACAATCTGAGTTG+CGG | + | 11333:48423-48442 | MS.gene41403:intron | 45.0% | |
| CGTGTGATCATCGTTTGAGA+TGG | - | 11333:50803-50822 | MS.gene41403:intergenic | 45.0% | |
| CTACTTCCCATCAATCCCAT+TGG | - | 11333:49026-49045 | MS.gene41403:intergenic | 45.0% | |
| CTCAGACAGATAGTCCTGTT+TGG | + | 11333:49120-49139 | MS.gene41403:CDS | 45.0% | |
| CTTGGCAATCCTTTGCCAAT+GGG | + | 11333:48957-48976 | MS.gene41403:CDS | 45.0% | |
| GAACTGGATCCAGGTCATAT+TGG | - | 11333:50304-50323 | MS.gene41403:intergenic | 45.0% | |
| GAATCGTCGAACCCAAATGA+AGG | + | 11333:48362-48381 | MS.gene41403:CDS | 45.0% | |
| GACCAACAACTTCTGTTCTG+GGG | + | 11333:50971-50990 | MS.gene41403:CDS | 45.0% | |
| GAGAGGATGAGTATGAAAGC+CGG | + | 11333:48016-48035 | MS.gene41403:CDS | 45.0% | |
| GAGATGGTTCACATTGCCAA+AGG | + | 11333:51227-51246 | MS.gene41403:CDS | 45.0% | |
| GAGTGTGAACAGTTCCTGTA+AGG | + | 11333:47713-47732 | MS.gene41403:CDS | 45.0% | |
| GCCTGGTATTAGTTCACCAA+TGG | + | 11333:49007-49026 | MS.gene41403:CDS | 45.0% | |
| GCTCTACCATCCTCAAATTC+TGG | + | 11333:48885-48904 | MS.gene41403:CDS | 45.0% | |
| GGAACAATTGCAAAGCCTGA+AGG | - | 11333:51658-51677 | MS.gene41403:intergenic | 45.0% | |
| GGAATCGGTGGAACAAGAAA+TGG | + | 11333:49552-49571 | MS.gene41403:CDS | 45.0% | |
| GGCTTTGCAATTGTTCCTGA+TGG | + | 11333:51661-51680 | MS.gene41403:CDS | 45.0% | |
| GTTCACATTGCCAAAGGTCA+AGG | + | 11333:51233-51252 | MS.gene41403:CDS | 45.0% | |
| TAAGCAACGGACGATAGAGT+TGG | - | 11333:50696-50715 | MS.gene41403:intergenic | 45.0% | |
| TATGTTGCACTCTTGCCTTC+AGG | + | 11333:51640-51659 | MS.gene41403:CDS | 45.0% | |
| TCCAGACCAGAATTTGAGGA+TGG | - | 11333:48894-48913 | MS.gene41403:intergenic | 45.0% | |
| TGAAAGGCTTAGAAGCGAGT+GGG | + | 11333:51175-51194 | MS.gene41403:CDS | 45.0% | |
| TGTACGAGACCAATATGACC+TGG | + | 11333:50292-50311 | MS.gene41403:intron | 45.0% | |
| TTAGCGCTGCAACATCTGTT+TGG | + | 11333:51111-51130 | MS.gene41403:CDS | 45.0% | |
| TTCAATGATTGCCCGTCAAC+TGG | - | 11333:51592-51611 | MS.gene41403:intergenic | 45.0% | |
| TTCTGTAAGCAGCATGCAGA+AGG | + | 11333:49733-49752 | MS.gene41403:CDS | 45.0% | |
| TTGAGATGGAAGAGGACATG+AGG | - | 11333:50789-50808 | MS.gene41403:intergenic | 45.0% | |
| TTGCCAATGGGACTTGATCT+CGG | + | 11333:48969-48988 | MS.gene41403:CDS | 45.0% | |
| TTGGATTTGGCGCTCATAGA+TGG | + | 11333:50725-50744 | MS.gene41403:CDS | 45.0% | |
| TTTGAGGATGGTAGAGCCAT+GGG | - | 11333:48882-48901 | MS.gene41403:intergenic | 45.0% | |
| ! | AACTGACTCCATTGTGAGCT+TGG | - | 11333:51806-51825 | MS.gene41403:intergenic | 45.0% |
| ! | GTCTGGAACTTGGTATTGGA+AGG | + | 11333:48907-48926 | MS.gene41403:CDS | 45.0% |
| ! | GTTTTATCTGGTGGAATCGG+TGG | + | 11333:49540-49559 | MS.gene41403:CDS | 45.0% |
| ! | TCATTTGGGTTCGACGATTC+TGG | - | 11333:48362-48381 | MS.gene41403:intergenic | 45.0% |
| ! | TCTGGTCTGGAACTTGGTAT+TGG | + | 11333:48903-48922 | MS.gene41403:CDS | 45.0% |
| ! | TGACGGGCAATCATTGAATG+TGG | + | 11333:51594-51613 | MS.gene41403:CDS | 45.0% |
| ! | TGTATTGGTCCTAAACCTGC+TGG | + | 11333:49209-49228 | MS.gene41403:CDS | 45.0% |
| ! | TTGAATGTGGTGATGAGTGG+TGG | + | 11333:51607-51626 | MS.gene41403:CDS | 45.0% |
| !! | AGATCTTGCATTGGCTGCTA+TGG | + | 11333:49079-49098 | MS.gene41403:CDS | 45.0% |
| !! | ATTGGAAGGAACGGTTTTGG+TGG | + | 11333:48921-48940 | MS.gene41403:CDS | 45.0% |
| !! | GGTATTGGAAGGAACGGTTT+TGG | + | 11333:48918-48937 | MS.gene41403:CDS | 45.0% |
| AATGGGACAGCCTCCAAATG+GGG | + | 11333:51015-51034 | MS.gene41403:CDS | 50.0% | |
| AGGTCACTTGGATTGAGCAC+TGG | + | 11333:50647-50666 | MS.gene41403:intron | 50.0% | |
| ATGGGACTTGATCTCGGAGA+TGG | + | 11333:48975-48994 | MS.gene41403:CDS | 50.0% | |
| ATTGCCAAAGGTCAAGGGCA+AGG | + | 11333:51239-51258 | MS.gene41403:CDS | 50.0% | |
| CAAAGTTATCGCTTCCGGAC+CGG | - | 11333:48038-48057 | MS.gene41403:intergenic | 50.0% | |
| CATCACTCAGAGTCCCCATT+TGG | - | 11333:51031-51050 | MS.gene41403:intergenic | 50.0% | |
| CCAGAGGGATCATTACCATC+AGG | - | 11333:51679-51698 | MS.gene41403:intergenic | 50.0% | |
| CCATTGGCAAAGGATTGCCA+AGG | - | 11333:48959-48978 | MS.gene41403:intergenic | 50.0% | |
| CCTTGGCAATCCTTTGCCAA+TGG | + | 11333:48956-48975 | MS.gene41403:CDS | 50.0% | |
| CTGAAGCTACGAGAGAAACC+GGG | + | 11333:49240-49259 | MS.gene41403:CDS | 50.0% | |
| GATGAGTATGAAAGCCGGTC+CGG | + | 11333:48021-48040 | MS.gene41403:CDS | 50.0% | |
| GATGGATACATCTTGCTCGG+TGG | + | 11333:51555-51574 | MS.gene41403:CDS | 50.0% | |
| GCAACAAAGCCAGCAGGTTT+AGG | - | 11333:49221-49240 | MS.gene41403:intergenic | 50.0% | |
| GCTGAAGCTACGAGAGAAAC+CGG | + | 11333:49239-49258 | MS.gene41403:CDS | 50.0% | |
| GGATTCTCACTTGACGAACC+GGG | - | 11333:49708-49727 | MS.gene41403:intergenic | 50.0% | |
| GGCAAGTCTTGCAACCTTAC+AGG | - | 11333:47730-47749 | MS.gene41403:intergenic | 50.0% | |
| GGTCACTTGGATTGAGCACT+GGG | + | 11333:50648-50667 | MS.gene41403:intron | 50.0% | |
| GTGGTGTATGCACCAGTTGA+CGG | + | 11333:51577-51596 | MS.gene41403:CDS | 50.0% | |
| GTTTCCTTGCCCTTGACCTT+TGG | - | 11333:51246-51265 | MS.gene41403:intergenic | 50.0% | |
| TAGCATTCGCAGCAGAGAAC+TGG | - | 11333:50320-50339 | MS.gene41403:intergenic | 50.0% | |
| TCCAACTGCCAAGCTCACAA+TGG | + | 11333:51795-51814 | MS.gene41403:CDS | 50.0% | |
| TCCATTGTGAGCTTGGCAGT+TGG | - | 11333:51799-51818 | MS.gene41403:intergenic | 50.0% | |
| TCCTGCACAATACAGCCAGA+AGG | - | 11333:49841-49860 | MS.gene41403:intergenic | 50.0% | |
| TCTCCGAGATCAAGTCCCAT+TGG | - | 11333:48975-48994 | MS.gene41403:intergenic | 50.0% | |
| TCTGCTTGGGAGAATGAGAG+AGG | + | 11333:47999-48018 | MS.gene41403:CDS | 50.0% | |
| TGGTGTATGCACCAGTTGAC+GGG | + | 11333:51578-51597 | MS.gene41403:CDS | 50.0% | |
| ! | AGCAGCATGCAGAAGGTGTA+TGG | + | 11333:49740-49759 | MS.gene41403:CDS | 50.0% |
| ! | CATGCTGCTTACAGAACCGA+AGG | - | 11333:49729-49748 | MS.gene41403:intergenic | 50.0% |
| ! | CCTGATGGTAATGATCCCTC+TGG | + | 11333:51676-51695 | MS.gene41403:CDS | 50.0% |
| ! | GATCAGGATGGTGGTGATGA+TGG | + | 11333:48081-48100 | MS.gene41403:CDS | 50.0% |
| ! | GCAGCATGCAGAAGGTGTAT+GGG | + | 11333:49741-49760 | MS.gene41403:CDS | 50.0% |
| ! | GGTGGAAGTTTGCTCACAGT+CGG | + | 11333:51748-51767 | MS.gene41403:CDS | 50.0% |
| ! | TCCTTCTGGCTGTATTGTGC+AGG | + | 11333:49837-49856 | MS.gene41403:CDS | 50.0% |
| ! | TCTGGTGATGATCAGGATGG+TGG | + | 11333:48072-48091 | MS.gene41403:CDS | 50.0% |
| ! | TTTGCAGCATTGAGCCAAGC+TGG | + | 11333:50915-50934 | MS.gene41403:intron | 50.0% |
| !! | CAGAGTGAGATTGGTCTCAC+TGG | + | 11333:47958-47977 | MS.gene41403:CDS | 50.0% |
| ACCCTCCAAAGGCAGTGTGA+AGG | + | 11333:50754-50773 | MS.gene41403:CDS | 55.0% | |
| ACTTGACGAACCGGGACTAG+TGG | - | 11333:49700-49719 | MS.gene41403:intergenic | 55.0% | |
| AGCCTTCACACTGCCTTTGG+AGG | - | 11333:50759-50778 | MS.gene41403:intergenic | 55.0% | |
| ATGGAGGGGCAGAGTGAGAT+TGG | + | 11333:47949-47968 | MS.gene41403:CDS | 55.0% | |
| CACTCAGAGTCCCCATTTGG+AGG | - | 11333:51028-51047 | MS.gene41403:intergenic | 55.0% | |
| CCAAAGGCAGTGTGAAGGCT+TGG | + | 11333:50759-50778 | MS.gene41403:CDS | 55.0% | |
| CCAAGCCTTCACACTGCCTT+TGG | - | 11333:50762-50781 | MS.gene41403:intergenic | 55.0% | |
| GAGGTGAATCCCGACACACT+TGG | - | 11333:50446-50465 | MS.gene41403:intergenic | 55.0% | |
| GCCTTCACACTGCCTTTGGA+GGG | - | 11333:50758-50777 | MS.gene41403:intergenic | 55.0% | |
| GCTTCAGCAACAAAGCCAGC+AGG | - | 11333:49227-49246 | MS.gene41403:intergenic | 55.0% | |
| TGCAGCGCTAAGCACGATAC+CGG | - | 11333:51102-51121 | MS.gene41403:intergenic | 55.0% | |
| ! | GGATACATCTTGCTCGGTGG+TGG | + | 11333:51558-51577 | MS.gene41403:CDS | 55.0% |
| ! | TGGTGGACCCATGCAAGAGA+TGG | + | 11333:51211-51230 | MS.gene41403:CDS | 55.0% |
| ! | TTCACACTGCCTTTGGAGGG+TGG | - | 11333:50755-50774 | MS.gene41403:intergenic | 55.0% |
| !! | GGAAGGAACGGTTTTGGTGG+TGG | + | 11333:48924-48943 | MS.gene41403:CDS | 55.0% |
| !! | GTGATGATGGTCAGCGCAAG+AGG | + | 11333:48094-48113 | MS.gene41403:CDS | 55.0% |
| !! | TGTGGTGGACCAGCAATTCC+TGG | + | 11333:48735-48754 | MS.gene41403:CDS | 55.0% |
| CGCAGCAGAGAACTGGATCC+AGG | - | 11333:50313-50332 | MS.gene41403:intergenic | 60.0% | |
| GATGGATCGCCACCCTCCAA+AGG | + | 11333:50743-50762 | MS.gene41403:CDS | 60.0% | |
| GCAGCGCTAAGCACGATACC+GGG | - | 11333:51101-51120 | MS.gene41403:intergenic | 60.0% | |
| GGAGATGGTCGCTCAATGCC+TGG | + | 11333:48990-49009 | MS.gene41403:CDS | 60.0% | |
| ! | GGTGGTGGTTCAAGCTCCCT+TGG | + | 11333:48939-48958 | MS.gene41403:CDS | 60.0% |
| ! | TGCAGAAGGTGTATGGGCCG+TGG | + | 11333:49747-49766 | MS.gene41403:CDS | 60.0% |
| !! | AAAGGTGGTGCTGGCGATGG+TGG | + | 11333:51727-51746 | MS.gene41403:CDS | 60.0% |
| !! | CAGAAAGGTGGTGCTGGCGA+TGG | + | 11333:51724-51743 | MS.gene41403:CDS | 60.0% |
| GCGCTAAGCACGATACCGGG+AGG | - | 11333:51098-51117 | MS.gene41403:intergenic | 65.0% | |
| ACGATACCGGGAGGCTCGCC+AGG | - | 11333:51089-51108 | MS.gene41403:intergenic | 70.0% | |
| CGATACCGGGAGGCTCGCCA+GGG | - | 11333:51088-51107 | MS.gene41403:intergenic | 70.0% | |
| GATGACCCTGGCGAGCCTCC+CGG | + | 11333:51080-51099 | MS.gene41403:CDS | 70.0% | |
| !! | GGTGGTGCTGGCGATGGTGG+TGG | + | 11333:51730-51749 | MS.gene41403:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 11333 | gene | 47702 | 51891 | 47702 | ID=MS.gene41403 |
| 11333 | mRNA | 47702 | 51891 | 47702 | ID=MS.gene41403.t1;Parent=MS.gene41403 |
| 11333 | exon | 47702 | 47809 | 47702 | ID=MS.gene41403.t1.exon1;Parent=MS.gene41403.t1 |
| 11333 | CDS | 47702 | 47809 | 47702 | ID=cds.MS.gene41403.t1;Parent=MS.gene41403.t1 |
| 11333 | exon | 47940 | 48166 | 47940 | ID=MS.gene41403.t1.exon2;Parent=MS.gene41403.t1 |
| 11333 | CDS | 47940 | 48166 | 47940 | ID=cds.MS.gene41403.t1;Parent=MS.gene41403.t1 |
| 11333 | exon | 48266 | 48383 | 48266 | ID=MS.gene41403.t1.exon3;Parent=MS.gene41403.t1 |
| 11333 | CDS | 48266 | 48383 | 48266 | ID=cds.MS.gene41403.t1;Parent=MS.gene41403.t1 |
| 11333 | exon | 48627 | 49310 | 48627 | ID=MS.gene41403.t1.exon4;Parent=MS.gene41403.t1 |
| 11333 | CDS | 48627 | 49310 | 48627 | ID=cds.MS.gene41403.t1;Parent=MS.gene41403.t1 |
| 11333 | exon | 49486 | 49587 | 49486 | ID=MS.gene41403.t1.exon5;Parent=MS.gene41403.t1 |
| 11333 | CDS | 49486 | 49587 | 49486 | ID=cds.MS.gene41403.t1;Parent=MS.gene41403.t1 |
| 11333 | exon | 49670 | 49882 | 49670 | ID=MS.gene41403.t1.exon6;Parent=MS.gene41403.t1 |
| 11333 | CDS | 49670 | 49882 | 49670 | ID=cds.MS.gene41403.t1;Parent=MS.gene41403.t1 |
| 11333 | exon | 50649 | 50823 | 50649 | ID=MS.gene41403.t1.exon7;Parent=MS.gene41403.t1 |
| 11333 | CDS | 50649 | 50823 | 50649 | ID=cds.MS.gene41403.t1;Parent=MS.gene41403.t1 |
| 11333 | exon | 50922 | 51289 | 50922 | ID=MS.gene41403.t1.exon8;Parent=MS.gene41403.t1 |
| 11333 | CDS | 50922 | 51289 | 50922 | ID=cds.MS.gene41403.t1;Parent=MS.gene41403.t1 |
| 11333 | exon | 51508 | 51891 | 51508 | ID=MS.gene41403.t1.exon9;Parent=MS.gene41403.t1 |
| 11333 | CDS | 51508 | 51891 | 51508 | ID=cds.MS.gene41403.t1;Parent=MS.gene41403.t1 |
| Gene Sequence |
| Protein sequence |
