Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42327.t1 | XP_013462138.1 | 96.5 | 372 | 10 | 1 | 1 | 372 | 1 | 369 | 4.60E-204 | 720.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42327.t1 | Q43814 | 86.9 | 375 | 46 | 1 | 1 | 372 | 1 | 375 | 2.2e-186 | 652.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42327.t1 | A0A072V483 | 96.5 | 372 | 10 | 1 | 1 | 372 | 1 | 369 | 3.3e-204 | 720.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049491 | MS.gene42327 | 0.830158 | 3.44E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene42327 | 0.838954 | 2.12E-57 | -1.69E-46 |
| MS.gene050099 | MS.gene42327 | 0.873164 | 1.82E-67 | -1.69E-46 |
| MS.gene050301 | MS.gene42327 | 0.841451 | 4.72E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene42327 | 0.836487 | 9.09E-57 | -1.69E-46 |
| MS.gene051471 | MS.gene42327 | 0.819505 | 1.12E-52 | -1.69E-46 |
| MS.gene051662 | MS.gene42327 | 0.834509 | 2.88E-56 | -1.69E-46 |
| MS.gene051663 | MS.gene42327 | 0.832363 | 9.87E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene42327 | 0.821497 | 3.91E-53 | -1.69E-46 |
| MS.gene052178 | MS.gene42327 | 0.812124 | 4.96E-51 | -1.69E-46 |
| MS.gene052207 | MS.gene42327 | 0.835908 | 1.28E-56 | -1.69E-46 |
| MS.gene052256 | MS.gene42327 | 0.809298 | 2.03E-50 | -1.69E-46 |
| MS.gene052287 | MS.gene42327 | 0.833511 | 5.11E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene42327 | 0.80727 | 5.49E-50 | -1.69E-46 |
| MS.gene052789 | MS.gene42327 | 0.811104 | 8.27E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene42327 | 0.836127 | 1.12E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene42327 | 0.809377 | 1.95E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene42327 | 0.828026 | 1.13E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene42327 | 0.850955 | 1.22E-60 | -1.69E-46 |
| MS.gene055422 | MS.gene42327 | 0.864508 | 1.16E-64 | -1.69E-46 |
| MS.gene055428 | MS.gene42327 | 0.82663 | 2.44E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene42327 | 0.811027 | 8.59E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene42327 | 0.801109 | 1.05E-48 | -1.69E-46 |
| MS.gene057439 | MS.gene42327 | 0.816918 | 4.32E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene42327 | 0.802996 | 4.30E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene42327 | 0.822302 | 2.55E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene42327 | 0.849397 | 3.32E-60 | -1.69E-46 |
| MS.gene058236 | MS.gene42327 | 0.808134 | 3.59E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene42327 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene42327 | 0.807951 | 3.93E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene42327 | 0.81274 | 3.64E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene42327 | 0.81065 | 1.04E-50 | -1.69E-46 |
| MS.gene059326 | MS.gene42327 | 0.834936 | 2.25E-56 | -1.69E-46 |
| MS.gene059518 | MS.gene42327 | 0.855337 | 6.75E-62 | -1.69E-46 |
| MS.gene059597 | MS.gene42327 | 0.801122 | 1.05E-48 | -1.69E-46 |
| MS.gene059894 | MS.gene42327 | 0.835065 | 2.08E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene42327 | 0.821568 | 3.77E-53 | -1.69E-46 |
| MS.gene060476 | MS.gene42327 | 0.823377 | 1.43E-53 | -1.69E-46 |
| MS.gene060559 | MS.gene42327 | 0.801334 | 9.46E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42327.t1 | MTR_3g112050 | 96.505 | 372 | 10 | 1 | 1 | 372 | 1 | 369 | 0.0 | 744 |
| MS.gene42327.t1 | MTR_1g022420 | 75.595 | 336 | 77 | 2 | 37 | 372 | 37 | 367 | 0.0 | 545 |
| MS.gene42327.t1 | MTR_5g093570 | 28.614 | 332 | 212 | 12 | 49 | 366 | 57 | 377 | 3.24e-22 | 97.1 |
| MS.gene42327.t1 | MTR_4g096900 | 28.981 | 314 | 201 | 10 | 69 | 370 | 85 | 388 | 1.05e-21 | 95.9 |
| MS.gene42327.t1 | MTR_4g096900 | 29.180 | 305 | 194 | 10 | 78 | 370 | 39 | 333 | 6.50e-21 | 92.8 |
| MS.gene42327.t1 | MTR_5g093570 | 31.720 | 186 | 120 | 5 | 49 | 229 | 57 | 240 | 3.33e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42327.t1 | AT1G75330 | 76.786 | 336 | 78 | 0 | 36 | 371 | 39 | 374 | 0.0 | 540 |
| MS.gene42327.t1 | AT3G20330 | 28.869 | 336 | 212 | 11 | 47 | 370 | 67 | 387 | 1.08e-24 | 104 |
| MS.gene42327.t1 | AT3G20330 | 28.869 | 336 | 212 | 11 | 47 | 370 | 67 | 387 | 1.08e-24 | 104 |
Find 96 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGTGTTCAAAGGATTTC+AGG | 0.223509 | 3.2:-89387955 | MS.gene42327:intron |
| GATCCAATAGAAGCTGTTAA+AGG | 0.304292 | 3.2:-89388044 | MS.gene42327:CDS |
| GCTCCTTTAACAGCTTCTAT+TGG | 0.306544 | 3.2:+89388041 | None:intergenic |
| CTTACTATGATTGAGCATAT+TGG | 0.330619 | 3.2:-89388354 | MS.gene42327:CDS |
| TGAGGGAATACTATTGAATA+TGG | 0.338965 | 3.2:+89386922 | None:intergenic |
| ATGTTGTGTATTCAGATGTC+TGG | 0.339826 | 3.2:-89388016 | MS.gene42327:CDS |
| GTCAAGACATTGCTGAAATC+AGG | 0.345748 | 3.2:-89389572 | MS.gene42327:CDS |
| GCATCAGGTTCAAAACCTTT+TGG | 0.353201 | 3.2:+89388122 | None:intergenic |
| CGAAGAAGAAACGGAGGAAA+TGG | 0.360158 | 3.2:+89389952 | None:intergenic |
| TTTGTTTGTGCTTGTCCAAA+AGG | 0.370668 | 3.2:-89388137 | MS.gene42327:CDS |
| GGGAGGAGAAAGAGAGAGGT+AGG | 0.374197 | 3.2:+89389994 | None:intergenic |
| GGGATGTGAATGGCGGAGAT+TGG | 0.378498 | 3.2:+89389973 | None:intergenic |
| GCAGGTGGATCAAAGTCTTA+TGG | 0.392884 | 3.2:-89387028 | MS.gene42327:intron |
| GGATGTGAATGGCGGAGATT+GGG | 0.403006 | 3.2:+89389974 | None:intergenic |
| TCTGTCAATCCATTGATGAT+TGG | 0.406520 | 3.2:+89388411 | None:intergenic |
| CTGTCAATCCATTGATGATT+GGG | 0.407392 | 3.2:+89388412 | None:intergenic |
| GGTGGCCATGCTATTTACTT+AGG | 0.422127 | 3.2:-89389446 | MS.gene42327:CDS |
| AGGACCTGATGACATTCAAA+TGG | 0.433277 | 3.2:-89389426 | MS.gene42327:CDS |
| GAGCATATTGGTCGGTTTGA+AGG | 0.441335 | 3.2:-89388342 | MS.gene42327:CDS |
| GACATTGTCTTCCCTTCAAA+AGG | 0.442663 | 3.2:+89389533 | None:intergenic |
| CCTGAAATCCTTTGAACACT+TGG | 0.444836 | 3.2:+89387955 | None:intergenic |
| TGTCCACTCATGGTTGTTGA+TGG | 0.446713 | 3.2:-89388180 | MS.gene42327:CDS |
| CTGGGCCAGCATGGGGCAAA+AGG | 0.452623 | 3.2:-89387997 | MS.gene42327:CDS |
| GCTATAATGCTCCATGTACT+TGG | 0.453359 | 3.2:-89386871 | MS.gene42327:CDS |
| CAATATGCTCAATCATAGTA+AGG | 0.454172 | 3.2:+89388355 | None:intergenic |
| AAATGAAACCCTTGTTCTCA+TGG | 0.455161 | 3.2:+89389490 | None:intergenic |
| TAAGGGCATCTGCCATGATC+TGG | 0.456920 | 3.2:+89388373 | None:intergenic |
| GTTGAGAAGGCAAGGAAGGC+TGG | 0.464381 | 3.2:-89388092 | MS.gene42327:CDS |
| GATATTGTTCTGAGTGGAAA+TGG | 0.471099 | 3.2:+89389929 | None:intergenic |
| CAGGTTGTTTACGTTGGAGA+TGG | 0.472606 | 3.2:-89388212 | MS.gene42327:CDS |
| GGCATCTGCCATGATCTGGC+AGG | 0.477854 | 3.2:+89388377 | None:intergenic |
| TGTTACTCTTACTGCGCCGT+TGG | 0.479100 | 3.2:-89390028 | MS.gene42327:CDS |
| TCAGATGTCTGGGCCAGCAT+GGG | 0.479544 | 3.2:-89388005 | MS.gene42327:CDS |
| TAATGACATTATCATGGCTC+GGG | 0.483139 | 3.2:-89389357 | MS.gene42327:CDS |
| TTACCCATTTGAATGTCATC+AGG | 0.485259 | 3.2:+89389422 | None:intergenic |
| ACTTCCACCCCTCGCTCCGC+TGG | 0.493862 | 3.2:+89386967 | None:intergenic |
| GATATTAGATCGAGCTATTG+AGG | 0.495351 | 3.2:-89389594 | MS.gene42327:CDS |
| GTTACCGGTGAGAGGAGATT+CGG | 0.496839 | 3.2:+89389880 | None:intergenic |
| TGCATTCGGTTCTCAGCTTG+AGG | 0.497081 | 3.2:+89386904 | None:intergenic |
| CTGCCATGATCTGGCAGGGA+TGG | 0.497703 | 3.2:+89388382 | None:intergenic |
| CCGGCTACTTGCCAAGTACA+TGG | 0.499356 | 3.2:+89386860 | None:intergenic |
| TTCAGATGTCTGGGCCAGCA+TGG | 0.499913 | 3.2:-89388006 | MS.gene42327:CDS |
| ACAAGGGTTTCATTTGAGAC+TGG | 0.507664 | 3.2:-89389482 | MS.gene42327:CDS |
| TATGGATGCGGCTGGTTCAA+AGG | 0.508322 | 3.2:-89387010 | MS.gene42327:CDS |
| CAACCATCCCTGCCAGATCA+TGG | 0.508342 | 3.2:-89388385 | MS.gene42327:CDS |
| GGAGGAGAAAGAGAGAGGTA+GGG | 0.508712 | 3.2:+89389995 | None:intergenic |
| CAAGCACAAACAAAGTGAAA+AGG | 0.514178 | 3.2:+89388146 | None:intergenic |
| GCAACTGTCCCAATCATCAA+TGG | 0.517535 | 3.2:-89388420 | MS.gene42327:CDS |
| ATAATGACATTATCATGGCT+CGG | 0.518928 | 3.2:-89389358 | MS.gene42327:CDS |
| GCATTCGGTTCTCAGCTTGA+GGG | 0.522280 | 3.2:+89386905 | None:intergenic |
| AACAGTTGAGAAGGCAAGGA+AGG | 0.523900 | 3.2:-89388096 | MS.gene42327:CDS |
| GAAGAAGAAACGGAGGAAAT+GGG | 0.527805 | 3.2:+89389953 | None:intergenic |
| CTAAGCCGTCCATGAGAACA+AGG | 0.529547 | 3.2:-89389499 | MS.gene42327:CDS |
| ACTGCTTACCAGCGGAGCGA+GGG | 0.530384 | 3.2:-89386975 | MS.gene42327:CDS |
| TCGTTATAATGACATTATCA+TGG | 0.532732 | 3.2:-89389363 | MS.gene42327:CDS |
| TGTGAATGGCGGAGATTGGG+AGG | 0.534236 | 3.2:+89389977 | None:intergenic |
| GGACCTGATGACATTCAAAT+GGG | 0.535925 | 3.2:-89389425 | MS.gene42327:CDS |
| TCAAGACATTGCTGAAATCA+GGG | 0.538060 | 3.2:-89389571 | MS.gene42327:CDS |
| TGGAAATGGCGAAGAAGAAA+CGG | 0.539105 | 3.2:+89389943 | None:intergenic |
| CACTGCTTACCAGCGGAGCG+AGG | 0.540194 | 3.2:-89386976 | MS.gene42327:CDS |
| GGACGGCTTAGCAAATATCA+TGG | 0.540729 | 3.2:+89389511 | None:intergenic |
| GCATGTCAGGTTGTTTACGT+TGG | 0.547332 | 3.2:-89388218 | MS.gene42327:intron |
| CAAAGTCTTATGGATGCGGC+TGG | 0.548039 | 3.2:-89387018 | MS.gene42327:CDS |
| CGGAGGAAATGGGATGTGAA+TGG | 0.550725 | 3.2:+89389963 | None:intergenic |
| GATTGGGAGGAGAAAGAGAG+AGG | 0.552857 | 3.2:+89389990 | None:intergenic |
| CTGCTTACCAGCGGAGCGAG+GGG | 0.556312 | 3.2:-89386974 | MS.gene42327:CDS |
| GAAATAATATTGTCCACTCA+TGG | 0.565147 | 3.2:-89388190 | MS.gene42327:CDS |
| CGGAGAGAGCAGAAGTTGCA+TGG | 0.569724 | 3.2:+89389903 | None:intergenic |
| CATTGCTGAAATCAGGGGAC+AGG | 0.571303 | 3.2:-89389565 | MS.gene42327:CDS |
| TACCGTCGCCAAGTGTTCAA+AGG | 0.573877 | 3.2:-89387963 | MS.gene42327:CDS |
| CTTACCAGCGGAGCGAGGGG+TGG | 0.577236 | 3.2:-89386971 | MS.gene42327:CDS |
| GGATCAAAGTCTTATGGATG+CGG | 0.579686 | 3.2:-89387022 | MS.gene42327:CDS |
| ATCCTTTGAACACTTGGCGA+CGG | 0.584165 | 3.2:+89387961 | None:intergenic |
| GTAGGGTTTGTGTGATCCAA+CGG | 0.588209 | 3.2:+89390012 | None:intergenic |
| GAAACCCTTGTTCTCATGGA+CGG | 0.592363 | 3.2:+89389494 | None:intergenic |
| TGTTGTGTATTCAGATGTCT+GGG | 0.593052 | 3.2:-89388015 | MS.gene42327:CDS |
| CTATGATTGAGCATATTGGT+CGG | 0.599286 | 3.2:-89388350 | MS.gene42327:CDS |
| AATATGCTCAATCATAGTAA+GGG | 0.611377 | 3.2:+89388356 | None:intergenic |
| CAGATGTCTGGGCCAGCATG+GGG | 0.615087 | 3.2:-89388004 | MS.gene42327:CDS |
| GCATCTGCCATGATCTGGCA+GGG | 0.615091 | 3.2:+89388378 | None:intergenic |
| CTGCCATCAACAACCATGAG+TGG | 0.620696 | 3.2:+89388177 | None:intergenic |
| TGAGTGGGGTTACCGGTGAG+AGG | 0.628022 | 3.2:+89389872 | None:intergenic |
| TCCGCCGAATCTCCTCTCAC+CGG | 0.629659 | 3.2:-89389884 | MS.gene42327:intron |
| TGGTCGGTTTGAAGGAACAA+AGG | 0.634562 | 3.2:-89388334 | MS.gene42327:intron |
| GCGAGGGGTGGAAGTGACTG+AGG | 0.634700 | 3.2:-89386959 | MS.gene42327:CDS |
| GTGAAAATGGGTGTGATGAG+TGG | 0.638177 | 3.2:-89390055 | None:intergenic |
| CATTCAAATGGGTAAGCGAG+AGG | 0.652099 | 3.2:-89389414 | MS.gene42327:CDS |
| ACCGGTGAGAGGAGATTCGG+CGG | 0.653909 | 3.2:+89389883 | None:intergenic |
| CAGGTCCTAAGTAAATAGCA+TGG | 0.658976 | 3.2:+89389441 | None:intergenic |
| CGGCGCAGTAAGAGTAACAG+TGG | 0.662083 | 3.2:+89390032 | None:intergenic |
| CAAGACATTGCTGAAATCAG+GGG | 0.670685 | 3.2:-89389570 | MS.gene42327:CDS |
| TTTCATGCACTGCTTACCAG+CGG | 0.673751 | 3.2:-89386983 | MS.gene42327:CDS |
| AGGAAATGGGATGTGAATGG+CGG | 0.675402 | 3.2:+89389966 | None:intergenic |
| TGGCATGATATTGTTCTGAG+TGG | 0.683484 | 3.2:+89389923 | None:intergenic |
| AAATGGCGAAGAAGAAACGG+AGG | 0.721906 | 3.2:+89389946 | None:intergenic |
| TAAGCCGTCCATGAGAACAA+GGG | 0.723620 | 3.2:-89389498 | MS.gene42327:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTAATCTAATTATTA+GGG | - | chr3.2:89387085-89387104 | MS.gene42327:intron | 10.0% |
| !!! | TCATTTTTAATCTAATTATT+AGG | - | chr3.2:89387084-89387103 | MS.gene42327:intron | 10.0% |
| !! | ATTCAATTGAAATTTGAAAA+AGG | + | chr3.2:89387697-89387716 | None:intergenic | 15.0% |
| !! | CAAATAATTAAAATGAAAAG+GGG | + | chr3.2:89388446-89388465 | None:intergenic | 15.0% |
| !! | GCAAATAATTAAAATGAAAA+GGG | + | chr3.2:89388447-89388466 | None:intergenic | 15.0% |
| !! | TAAGTTTAATTCTTGAATTA+AGG | - | chr3.2:89387814-89387833 | MS.gene42327:intron | 15.0% |
| !! | TGCAAATAATTAAAATGAAA+AGG | + | chr3.2:89388448-89388467 | None:intergenic | 15.0% |
| !!! | AGTTATATTTGATATTGTTT+TGG | - | chr3.2:89387641-89387660 | MS.gene42327:intron | 15.0% |
| !!! | TTTTCATTTTAATTATTTGC+AGG | - | chr3.2:89388447-89388466 | MS.gene42327:CDS | 15.0% |
| !! | AGGTACTTAATATAATATTG+TGG | - | chr3.2:89388978-89388997 | MS.gene42327:intron | 20.0% |
| !! | ATGAAATCTTAAACTAGAAT+CGG | + | chr3.2:89387068-89387087 | None:intergenic | 20.0% |
| !! | CAAGTTATTTAAATCAAGAT+TGG | + | chr3.2:89387145-89387164 | None:intergenic | 20.0% |
| !!! | CTGAAATATTTTGATATTAG+TGG | - | chr3.2:89388278-89388297 | MS.gene42327:intron | 20.0% |
| !!! | GAAATGATTTATCTTTTGTA+TGG | - | chr3.2:89389211-89389230 | MS.gene42327:intron | 20.0% |
| !!! | TCACAAAATATAGTGTTTTT+GGG | - | chr3.2:89389001-89389020 | MS.gene42327:intron | 20.0% |
| !!! | TTAAAACAAAGTGTTATTGT+GGG | - | chr3.2:89389149-89389168 | MS.gene42327:intron | 20.0% |
| ! | AAACAGAAAAAGTTGGAAAT+GGG | - | chr3.2:89387246-89387265 | MS.gene42327:intron | 25.0% |
| ! | AATATGCTCAATCATAGTAA+GGG | + | chr3.2:89388560-89388579 | None:intergenic | 25.0% |
| ! | ATGCCACAAAATCAAAATAA+TGG | + | chr3.2:89389794-89389813 | None:intergenic | 25.0% |
| ! | ATGTGAATAGACTAGTATTT+AGG | - | chr3.2:89389581-89389600 | MS.gene42327:CDS | 25.0% |
| ! | GATTTATGTAATGCAAACAT+GGG | - | chr3.2:89388222-89388241 | MS.gene42327:intron | 25.0% |
| ! | GTATTTCATATTCATCAACT+TGG | + | chr3.2:89389525-89389544 | None:intergenic | 25.0% |
| ! | TATACTCAAACAGAAAAAGT+TGG | - | chr3.2:89387239-89387258 | MS.gene42327:intron | 25.0% |
| ! | TATTTCTTTGTTACAAATGG+AGG | + | chr3.2:89389488-89389507 | None:intergenic | 25.0% |
| ! | TCCATTTGTAACAAAGAAAT+AGG | - | chr3.2:89389487-89389506 | MS.gene42327:CDS | 25.0% |
| ! | TCGTTATAATGACATTATCA+TGG | - | chr3.2:89387550-89387569 | MS.gene42327:intron | 25.0% |
| ! | TTCAATGAACAACTTTCATA+GGG | - | chr3.2:89387786-89387805 | MS.gene42327:intron | 25.0% |
| !! | GTCACAAAATATAGTGTTTT+TGG | - | chr3.2:89389000-89389019 | MS.gene42327:intron | 25.0% |
| !! | GTTAAAACAAAGTGTTATTG+TGG | - | chr3.2:89389148-89389167 | MS.gene42327:intron | 25.0% |
| !! | TCCTATTTCTTTGTTACAAA+TGG | + | chr3.2:89389491-89389510 | None:intergenic | 25.0% |
| !!! | ATTAAGGATTTGCTTTTAAG+AGG | - | chr3.2:89387830-89387849 | MS.gene42327:intron | 25.0% |
| !!! | TCACATAGATGATTTTGATA+AGG | - | chr3.2:89387283-89387302 | MS.gene42327:intron | 25.0% |
| AAAAATAAAGAGTCGGATGA+AGG | + | chr3.2:89389768-89389787 | None:intergenic | 30.0% | |
| AAAATAAAGAGTCGGATGAA+GGG | + | chr3.2:89389767-89389786 | None:intergenic | 30.0% | |
| ACTTGTTCACACTTAGATTT+CGG | - | chr3.2:89389618-89389637 | MS.gene42327:CDS | 30.0% | |
| AGGAAATATAAGCACAAGAA+TGG | + | chr3.2:89387677-89387696 | None:intergenic | 30.0% | |
| AGGATCAAACCTCTTATAAA+TGG | + | chr3.2:89389418-89389437 | None:intergenic | 30.0% | |
| ATAATGACATTATCATGGCT+CGG | - | chr3.2:89387555-89387574 | MS.gene42327:intron | 30.0% | |
| ATGGCAGAAAAATAAAGAGT+CGG | + | chr3.2:89389775-89389794 | None:intergenic | 30.0% | |
| CAAACAGAAAAAGTTGGAAA+TGG | - | chr3.2:89387245-89387264 | MS.gene42327:intron | 30.0% | |
| CAATATGCTCAATCATAGTA+AGG | + | chr3.2:89388561-89388580 | None:intergenic | 30.0% | |
| CCATAAATAGTTAGGAACTT+AGG | - | chr3.2:89389688-89389707 | MS.gene42327:intron | 30.0% | |
| CCTAAGTTCCTAACTATTTA+TGG | + | chr3.2:89389691-89389710 | None:intergenic | 30.0% | |
| CTTACTATGATTGAGCATAT+TGG | - | chr3.2:89388559-89388578 | MS.gene42327:intron | 30.0% | |
| GAAATAATATTGTCCACTCA+TGG | - | chr3.2:89388723-89388742 | MS.gene42327:intron | 30.0% | |
| GACATGCATATCATAGAATA+TGG | + | chr3.2:89388682-89388701 | None:intergenic | 30.0% | |
| GCATTGTTCCATAAATAGTT+AGG | - | chr3.2:89389680-89389699 | MS.gene42327:intron | 30.0% | |
| GGATTTATGTAATGCAAACA+TGG | - | chr3.2:89388221-89388240 | MS.gene42327:intron | 30.0% | |
| GTTCAATGAACAACTTTCAT+AGG | - | chr3.2:89387785-89387804 | MS.gene42327:intron | 30.0% | |
| TATTCTATGATATGCATGTC+AGG | - | chr3.2:89388682-89388701 | MS.gene42327:intron | 30.0% | |
| TATTTATGGAACAATGCAGT+GGG | + | chr3.2:89389677-89389696 | None:intergenic | 30.0% | |
| TCAATGAACAACTTTCATAG+GGG | - | chr3.2:89387787-89387806 | MS.gene42327:intron | 30.0% | |
| TGAGGGAATACTATTGAATA+TGG | + | chr3.2:89389994-89390013 | None:intergenic | 30.0% | |
| TTACTCTTTCAATTTACGCA+TGG | + | chr3.2:89388102-89388121 | None:intergenic | 30.0% | |
| TTATCTACAAGCAATTATCC+TGG | + | chr3.2:89388061-89388080 | None:intergenic | 30.0% | |
| ! | AAGCCCACTAAAATTTTAAG+AGG | + | chr3.2:89388304-89388323 | None:intergenic | 30.0% |
| ! | CAGGTTTTTACAATCAAACT+TGG | + | chr3.2:89388038-89388057 | None:intergenic | 30.0% |
| ! | TGTTGTTTGTCTTGAAAAGT+AGG | - | chr3.2:89388610-89388629 | MS.gene42327:intron | 30.0% |
| !! | TGGCCTCTTAAAATTTTAGT+GGG | - | chr3.2:89388298-89388317 | MS.gene42327:intron | 30.0% |
| !!! | CTGCCATTATTTTGATTTTG+TGG | - | chr3.2:89389788-89389807 | MS.gene42327:intron | 30.0% |
| !!! | GTTTTGAGTTTTGAACAACT+GGG | - | chr3.2:89387164-89387183 | MS.gene42327:intron | 30.0% |
| !!! | TGTTTTGAGTTTTGAACAAC+TGG | - | chr3.2:89387163-89387182 | MS.gene42327:intron | 30.0% |
| AAATAAAGAGTCGGATGAAG+GGG | + | chr3.2:89389766-89389785 | None:intergenic | 35.0% | |
| AAATGAAACCCTTGTTCTCA+TGG | + | chr3.2:89387426-89387445 | None:intergenic | 35.0% | |
| ACAATCGCAAGAGGATATAA+AGG | + | chr3.2:89387983-89388002 | None:intergenic | 35.0% | |
| AGCCTCTTGTGTAAAAAACA+GGG | - | chr3.2:89389313-89389332 | MS.gene42327:intron | 35.0% | |
| ATAGATTGTGTGTGCAATGT+TGG | - | chr3.2:89388200-89388219 | MS.gene42327:CDS | 35.0% | |
| ATGTTGTGTATTCAGATGTC+TGG | - | chr3.2:89388897-89388916 | MS.gene42327:intron | 35.0% | |
| CAAGCACAAACAAAGTGAAA+AGG | + | chr3.2:89388770-89388789 | None:intergenic | 35.0% | |
| CATCAATAAACGTGCACTTT+CGG | - | chr3.2:89388415-89388434 | MS.gene42327:CDS | 35.0% | |
| CTATGATTGAGCATATTGGT+CGG | - | chr3.2:89388563-89388582 | MS.gene42327:intron | 35.0% | |
| CTATTTATGGAACAATGCAG+TGG | + | chr3.2:89389678-89389697 | None:intergenic | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | - | chr3.2:89389318-89389337 | MS.gene42327:intron | 35.0% | |
| GATATTAGATCGAGCTATTG+AGG | - | chr3.2:89387319-89387338 | MS.gene42327:intron | 35.0% | |
| GATCCAATAGAAGCTGTTAA+AGG | - | chr3.2:89388869-89388888 | MS.gene42327:intron | 35.0% | |
| GCATATCATAGAATATGGTC+AGG | + | chr3.2:89388677-89388696 | None:intergenic | 35.0% | |
| GTAGGCTTCTTTCTAATTCT+TGG | - | chr3.2:89388628-89388647 | MS.gene42327:intron | 35.0% | |
| GTTAACTGAAGAACAATACG+TGG | - | chr3.2:89388154-89388173 | MS.gene42327:CDS | 35.0% | |
| TAAACTAGAATCGGATGAGT+GGG | + | chr3.2:89387059-89387078 | None:intergenic | 35.0% | |
| TAATGACATTATCATGGCTC+GGG | - | chr3.2:89387556-89387575 | MS.gene42327:intron | 35.0% | |
| TCAAGACATTGCTGAAATCA+GGG | - | chr3.2:89387342-89387361 | MS.gene42327:intron | 35.0% | |
| TGATGCAAAAACAGTTGAGA+AGG | - | chr3.2:89388808-89388827 | MS.gene42327:intron | 35.0% | |
| TGTCTAAGCTAAATTCCAGA+TGG | + | chr3.2:89389082-89389101 | None:intergenic | 35.0% | |
| TGTTGTGTATTCAGATGTCT+GGG | - | chr3.2:89388898-89388917 | MS.gene42327:intron | 35.0% | |
| TTAAACTAGAATCGGATGAG+TGG | + | chr3.2:89387060-89387079 | None:intergenic | 35.0% | |
| TTACCCATTTGAATGTCATC+AGG | + | chr3.2:89387494-89387513 | None:intergenic | 35.0% | |
| TTTGATTGTAAAAACCTGCC+AGG | - | chr3.2:89388040-89388059 | MS.gene42327:CDS | 35.0% | |
| TTTGTTTGTGCTTGTCCAAA+AGG | - | chr3.2:89388776-89388795 | MS.gene42327:intron | 35.0% | |
| ! | ATTCTTTTACTGTAGCCATC+TGG | - | chr3.2:89389064-89389083 | MS.gene42327:intron | 35.0% |
| ! | CTGTCAATCCATTGATGATT+GGG | + | chr3.2:89388504-89388523 | None:intergenic | 35.0% |
| ! | GAATTTAGCTTAGACAGTTC+AGG | - | chr3.2:89389086-89389105 | MS.gene42327:intron | 35.0% |
| ! | GATATTGTTCTGAGTGGAAA+TGG | + | chr3.2:89386987-89387006 | None:intergenic | 35.0% |
| ! | GTGGCCTCTTAAAATTTTAG+TGG | - | chr3.2:89388297-89388316 | MS.gene42327:intron | 35.0% |
| ! | TAGCATTTTGTGCATGCATT+CGG | + | chr3.2:89390026-89390045 | None:intergenic | 35.0% |
| ! | TCTGTCAATCCATTGATGAT+TGG | + | chr3.2:89388505-89388524 | None:intergenic | 35.0% |
| !! | AACAGCAACTTTTATTTCCC+AGG | - | chr3.2:89389645-89389664 | MS.gene42327:CDS | 35.0% |
| !! | AAGGATTTGCTTTTAAGAGG+TGG | - | chr3.2:89387833-89387852 | MS.gene42327:intron | 35.0% |
| !! | ACAAGACTTGCTATCTGATT+GGG | - | chr3.2:89388356-89388375 | MS.gene42327:CDS | 35.0% |
| !! | AGGATTTGCTTTTAAGAGGT+GGG | - | chr3.2:89387834-89387853 | MS.gene42327:intron | 35.0% |
| !! | TACAAGACTTGCTATCTGAT+TGG | - | chr3.2:89388355-89388374 | MS.gene42327:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | + | chr3.2:89389318-89389337 | None:intergenic | 35.0% |
| !!! | TTCTCAACTGTTTTTGCATC+AGG | + | chr3.2:89388809-89388828 | None:intergenic | 35.0% |
| AAACTAGAATCGGATGAGTG+GGG | + | chr3.2:89387058-89387077 | None:intergenic | 40.0% | |
| AATTTGTAGCTTGATGCCAC+CGG | - | chr3.2:89387881-89387900 | MS.gene42327:intron | 40.0% | |
| AGGACCTGATGACATTCAAA+TGG | - | chr3.2:89387487-89387506 | MS.gene42327:intron | 40.0% | |
| AGTTGTTCATTGAACCCATG+AGG | + | chr3.2:89387780-89387799 | None:intergenic | 40.0% | |
| CAAAAACAGTTGAGAAGGCA+AGG | - | chr3.2:89388813-89388832 | MS.gene42327:intron | 40.0% | |
| CAAGACATTGCTGAAATCAG+GGG | - | chr3.2:89387343-89387362 | MS.gene42327:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | - | chr3.2:89389312-89389331 | MS.gene42327:intron | 40.0% | |
| CAGGTCCTAAGTAAATAGCA+TGG | + | chr3.2:89387475-89387494 | None:intergenic | 40.0% | |
| CCAAGTGTTCAAAGGATTTC+AGG | - | chr3.2:89388958-89388977 | MS.gene42327:intron | 40.0% | |
| CCAATAAGCAAGAGCTTGAA+CGG | - | chr3.2:89389457-89389476 | MS.gene42327:CDS | 40.0% | |
| CCTGAAATCCTTTGAACACT+TGG | + | chr3.2:89388961-89388980 | None:intergenic | 40.0% | |
| GAAGAAGAAACGGAGGAAAT+GGG | + | chr3.2:89386963-89386982 | None:intergenic | 40.0% | |
| GACATTGTCTTCCCTTCAAA+AGG | + | chr3.2:89387383-89387402 | None:intergenic | 40.0% | |
| GCGTACAATACACCAAATAG+TGG | - | chr3.2:89389343-89389362 | MS.gene42327:CDS | 40.0% | |
| GCTATAATGCTCCATGTACT+TGG | - | chr3.2:89390042-89390061 | MS.gene42327:CDS | 40.0% | |
| GCTCCTTTAACAGCTTCTAT+TGG | + | chr3.2:89388875-89388894 | None:intergenic | 40.0% | |
| GGACCTGATGACATTCAAAT+GGG | - | chr3.2:89387488-89387507 | MS.gene42327:intron | 40.0% | |
| GGCTTCTTTCTAATTCTTGG+TGG | - | chr3.2:89388631-89388650 | MS.gene42327:intron | 40.0% | |
| GTCAAGACATTGCTGAAATC+AGG | - | chr3.2:89387341-89387360 | MS.gene42327:intron | 40.0% | |
| TATGGACTTACGAGCAAAGT+AGG | - | chr3.2:89389229-89389248 | MS.gene42327:intron | 40.0% | |
| TCAATTACTGTCCCCAAAGT+CGG | + | chr3.2:89387934-89387953 | None:intergenic | 40.0% | |
| TCATCAGGTATGTTGCTCAT+TGG | - | chr3.2:89387586-89387605 | MS.gene42327:intron | 40.0% | |
| TGGAAATGGCGAAGAAGAAA+CGG | + | chr3.2:89386973-89386992 | None:intergenic | 40.0% | |
| TGTTCAAGACAGTGCCAAAA+TGG | - | chr3.2:89389723-89389742 | MS.gene42327:intron | 40.0% | |
| TTAGCTTAGACAGTTCAGGT+TGG | - | chr3.2:89389090-89389109 | MS.gene42327:intron | 40.0% | |
| TTCAAGCTCTTGCTTATTGG+AGG | + | chr3.2:89389457-89389476 | None:intergenic | 40.0% | |
| ! | ACAAGGGTTTCATTTGAGAC+TGG | - | chr3.2:89387431-89387450 | MS.gene42327:intron | 40.0% |
| ! | AGGACATTTCGACCTTTTGA+AGG | - | chr3.2:89387368-89387387 | MS.gene42327:intron | 40.0% |
| ! | GCATCAGGTTCAAAACCTTT+TGG | + | chr3.2:89388794-89388813 | None:intergenic | 40.0% |
| ! | GGACATTTCGACCTTTTGAA+GGG | - | chr3.2:89387369-89387388 | MS.gene42327:intron | 40.0% |
| ! | GGAGAGTTTGACATCCATTT+TGG | + | chr3.2:89389740-89389759 | None:intergenic | 40.0% |
| ! | GGATCAAAGTCTTATGGATG+CGG | - | chr3.2:89389891-89389910 | MS.gene42327:CDS | 40.0% |
| ! | GGGATTGGTGCATCAATTAT+AGG | - | chr3.2:89389121-89389140 | MS.gene42327:intron | 40.0% |
| ! | TAGCTTAGACAGTTCAGGTT+GGG | - | chr3.2:89389091-89389110 | MS.gene42327:intron | 40.0% |
| ! | TGGCATGATATTGTTCTGAG+TGG | + | chr3.2:89386993-89387012 | None:intergenic | 40.0% |
| !!! | GAGACTGGCTTTTCATTGTT+GGG | - | chr3.2:89387446-89387465 | MS.gene42327:intron | 40.0% |
| !!! | TGAGACTGGCTTTTCATTGT+TGG | - | chr3.2:89387445-89387464 | MS.gene42327:intron | 40.0% |
| AAATGGCGAAGAAGAAACGG+AGG | + | chr3.2:89386970-89386989 | None:intergenic | 45.0% | |
| AACAGTTGAGAAGGCAAGGA+AGG | - | chr3.2:89388817-89388836 | MS.gene42327:intron | 45.0% | |
| AATGCAGTGGGAACTTACCT+GGG | + | chr3.2:89389665-89389684 | None:intergenic | 45.0% | |
| ACCTCTTATAAATGGCAGCC+CGG | + | chr3.2:89389410-89389429 | None:intergenic | 45.0% | |
| ACTAAAGATCCCACATACGC+AGG | + | chr3.2:89389384-89389403 | None:intergenic | 45.0% | |
| AGACTTTGATCCACCTGCAT+TGG | + | chr3.2:89389883-89389902 | None:intergenic | 45.0% | |
| AGGAAATGGGATGTGAATGG+CGG | + | chr3.2:89386950-89386969 | None:intergenic | 45.0% | |
| AGGGTTCAATACATGCCTCA+TGG | - | chr3.2:89387762-89387781 | MS.gene42327:intron | 45.0% | |
| AGTTGTGTGAAAGGAGCAAC+CGG | - | chr3.2:89387725-89387744 | MS.gene42327:intron | 45.0% | |
| ATCCTTTGAACACTTGGCGA+CGG | + | chr3.2:89388955-89388974 | None:intergenic | 45.0% | |
| ATGTGGGATCTTTAGTGCAC+CGG | - | chr3.2:89389388-89389407 | MS.gene42327:CDS | 45.0% | |
| CAGGTTGTTTACGTTGGAGA+TGG | - | chr3.2:89388701-89388720 | MS.gene42327:intron | 45.0% | |
| CATTCAAATGGGTAAGCGAG+AGG | - | chr3.2:89387499-89387518 | MS.gene42327:intron | 45.0% | |
| CCCTCTGTAAAACATGCATC+CGG | + | chr3.2:89387903-89387922 | None:intergenic | 45.0% | |
| CCGTTCAAGCTCTTGCTTAT+TGG | + | chr3.2:89389460-89389479 | None:intergenic | 45.0% | |
| CGAAGAAGAAACGGAGGAAA+TGG | + | chr3.2:89386964-89386983 | None:intergenic | 45.0% | |
| CTAAAGATCCCACATACGCA+GGG | + | chr3.2:89389383-89389402 | None:intergenic | 45.0% | |
| CTACAAGCAATTATCCTGGC+AGG | + | chr3.2:89388057-89388076 | None:intergenic | 45.0% | |
| CTTGCTTATTGGAGGAAAGG+AGG | + | chr3.2:89389449-89389468 | None:intergenic | 45.0% | |
| CTTGTGTTATGTTTGTCGCG+TGG | - | chr3.2:89389258-89389277 | MS.gene42327:intron | 45.0% | |
| GAAACCCTTGTTCTCATGGA+CGG | + | chr3.2:89387422-89387441 | None:intergenic | 45.0% | |
| GACTTTGATCCACCTGCATT+GGG | + | chr3.2:89389882-89389901 | None:intergenic | 45.0% | |
| GCAACTGTCCCAATCATCAA+TGG | - | chr3.2:89388493-89388512 | MS.gene42327:intron | 45.0% | |
| GCAGGTGGATCAAAGTCTTA+TGG | - | chr3.2:89389885-89389904 | MS.gene42327:CDS | 45.0% | |
| GCTCTTGCTTATTGGAGGAA+AGG | + | chr3.2:89389452-89389471 | None:intergenic | 45.0% | |
| GGACGGCTTAGCAAATATCA+TGG | + | chr3.2:89387405-89387424 | None:intergenic | 45.0% | |
| GGGTTCAATACATGCCTCAT+GGG | - | chr3.2:89387763-89387782 | MS.gene42327:intron | 45.0% | |
| GTAGGGTTTGTGTGATCCAA+CGG | + | chr3.2:89386904-89386923 | None:intergenic | 45.0% | |
| TAAGCCGTCCATGAGAACAA+GGG | - | chr3.2:89387415-89387434 | MS.gene42327:intron | 45.0% | |
| TCAGGTATGTTGCTCATTGG+TGG | - | chr3.2:89387589-89387608 | MS.gene42327:intron | 45.0% | |
| TCTGCGCAAAGTTGTGTGAA+AGG | - | chr3.2:89387716-89387735 | MS.gene42327:intron | 45.0% | |
| TCTGTAAAACATGCATCCGG+TGG | + | chr3.2:89387900-89387919 | None:intergenic | 45.0% | |
| TGAAACCATATGCCCAATGC+AGG | - | chr3.2:89389867-89389886 | MS.gene42327:intron | 45.0% | |
| TGTCCACTCATGGTTGTTGA+TGG | - | chr3.2:89388733-89388752 | MS.gene42327:intron | 45.0% | |
| TTATTGGAGGAAAGGAGGAC+TGG | + | chr3.2:89389444-89389463 | None:intergenic | 45.0% | |
| TTTCATGCACTGCTTACCAG+CGG | - | chr3.2:89389930-89389949 | MS.gene42327:CDS | 45.0% | |
| ! | ACCGGATGCATGTTTTACAG+AGG | - | chr3.2:89387899-89387918 | MS.gene42327:intron | 45.0% |
| ! | CAAATAGTGGAACCCCTTCT+CGG | - | chr3.2:89389356-89389375 | MS.gene42327:CDS | 45.0% |
| ! | CCGGATGCATGTTTTACAGA+GGG | - | chr3.2:89387900-89387919 | MS.gene42327:intron | 45.0% |
| ! | GCATGTCAGGTTGTTTACGT+TGG | - | chr3.2:89388695-89388714 | MS.gene42327:intron | 45.0% |
| ! | GGTGGCCATGCTATTTACTT+AGG | - | chr3.2:89387467-89387486 | MS.gene42327:intron | 45.0% |
| !! | GAGCATATTGGTCGGTTTGA+AGG | - | chr3.2:89388571-89388590 | MS.gene42327:intron | 45.0% |
| !! | TGGTCGGTTTGAAGGAACAA+AGG | - | chr3.2:89388579-89388598 | MS.gene42327:intron | 45.0% |
| !! | TTAGACAGTTCAGGTTGGGT+GGG | - | chr3.2:89389095-89389114 | MS.gene42327:intron | 45.0% |
| !!! | ACTGGCTTTTCATTGTTGGG+TGG | - | chr3.2:89387449-89387468 | MS.gene42327:intron | 45.0% |
| AAAGAGTCGGATGAAGGGGA+AGG | + | chr3.2:89389762-89389781 | None:intergenic | 50.0% | |
| AACCATATGCCCAATGCAGG+TGG | - | chr3.2:89389870-89389889 | MS.gene42327:intron | 50.0% | |
| AAGAGTCGGATGAAGGGGAA+GGG | + | chr3.2:89389761-89389780 | None:intergenic | 50.0% | |
| AATCGGATGAGTGGGGTTAC+CGG | + | chr3.2:89387051-89387070 | None:intergenic | 50.0% | |
| ATCCACCTGCATTGGGCATA+TGG | + | chr3.2:89389875-89389894 | None:intergenic | 50.0% | |
| ATGTTTGTCGCGTGGCTGAA+AGG | - | chr3.2:89389266-89389285 | MS.gene42327:intron | 50.0% | |
| CAATGCAGTGGGAACTTACC+TGG | + | chr3.2:89389666-89389685 | None:intergenic | 50.0% | |
| CATTGCTGAAATCAGGGGAC+AGG | - | chr3.2:89387348-89387367 | MS.gene42327:intron | 50.0% | |
| CGAGAAGGGGTTCCACTATT+TGG | + | chr3.2:89389358-89389377 | None:intergenic | 50.0% | |
| CGGAGGAAATGGGATGTGAA+TGG | + | chr3.2:89386953-89386972 | None:intergenic | 50.0% | |
| CTAAGCCGTCCATGAGAACA+AGG | - | chr3.2:89387414-89387433 | MS.gene42327:intron | 50.0% | |
| CTGCCATCAACAACCATGAG+TGG | + | chr3.2:89388739-89388758 | None:intergenic | 50.0% | |
| GATTGGGAGGAGAAAGAGAG+AGG | + | chr3.2:89386926-89386945 | None:intergenic | 50.0% | |
| GCATTCGGTTCTCAGCTTGA+GGG | + | chr3.2:89390011-89390030 | None:intergenic | 50.0% | |
| GGAGGAGAAAGAGAGAGGTA+GGG | + | chr3.2:89386921-89386940 | None:intergenic | 50.0% | |
| GGGGACAGTAATTGAGACAG+TGG | - | chr3.2:89387939-89387958 | MS.gene42327:intron | 50.0% | |
| GTTACCGGTGAGAGGAGATT+CGG | + | chr3.2:89387036-89387055 | None:intergenic | 50.0% | |
| TACACAAGAGGCTGCTTCCA+GGG | + | chr3.2:89389306-89389325 | None:intergenic | 50.0% | |
| TACCGTCGCCAAGTGTTCAA+AGG | - | chr3.2:89388950-89388969 | MS.gene42327:intron | 50.0% | |
| TGCATTCGGTTCTCAGCTTG+AGG | + | chr3.2:89390012-89390031 | None:intergenic | 50.0% | |
| TGTGGGATCTTTAGTGCACC+GGG | - | chr3.2:89389389-89389408 | MS.gene42327:CDS | 50.0% | |
| TGTTACTCTTACTGCGCCGT+TGG | - | chr3.2:89386885-89386904 | MS.gene42327:CDS | 50.0% | |
| TTACACAAGAGGCTGCTTCC+AGG | + | chr3.2:89389307-89389326 | None:intergenic | 50.0% | |
| ! | ACCGGGCTGCCATTTATAAG+AGG | - | chr3.2:89389406-89389425 | MS.gene42327:CDS | 50.0% |
| ! | CAAAGTCTTATGGATGCGGC+TGG | - | chr3.2:89389895-89389914 | MS.gene42327:CDS | 50.0% |
| ! | GGATGTGAATGGCGGAGATT+GGG | + | chr3.2:89386942-89386961 | None:intergenic | 50.0% |
| ! | TATGGATGCGGCTGGTTCAA+AGG | - | chr3.2:89389903-89389922 | MS.gene42327:CDS | 50.0% |
| ! | TTCTTCCTTTTGCCCCATGC+TGG | + | chr3.2:89388924-89388943 | None:intergenic | 50.0% |
| !! | AGGGCTCTAATGCCGACTTT+GGG | - | chr3.2:89387919-89387938 | MS.gene42327:intron | 50.0% |
| !! | CTTAGACAGTTCAGGTTGGG+TGG | - | chr3.2:89389094-89389113 | MS.gene42327:intron | 50.0% |
| !! | TAAGGGCATCTGCCATGATC+TGG | + | chr3.2:89388543-89388562 | None:intergenic | 50.0% |
| !! | TAGACAGTTCAGGTTGGGTG+GGG | - | chr3.2:89389096-89389115 | MS.gene42327:intron | 50.0% |
| !!! | GGCTCGGGTTTTTTCTCATC+AGG | - | chr3.2:89387571-89387590 | MS.gene42327:intron | 50.0% |
| ACATACGCAGGGTCCGAGAA+GGG | + | chr3.2:89389372-89389391 | None:intergenic | 55.0% | |
| ACCCTATCCCGAAGTGAAGC+CGG | + | chr3.2:89387747-89387766 | None:intergenic | 55.0% | |
| ACCTTCCGAGGACTTGGCAT+TGG | - | chr3.2:89388245-89388264 | MS.gene42327:intron | 55.0% | |
| CAACCATCCCTGCCAGATCA+TGG | - | chr3.2:89388528-89388547 | MS.gene42327:intron | 55.0% | |
| CGGAGAGAGCAGAAGTTGCA+TGG | + | chr3.2:89387013-89387032 | None:intergenic | 55.0% | |
| CGGCGCAGTAAGAGTAACAG+TGG | + | chr3.2:89386884-89386903 | None:intergenic | 55.0% | |
| GCATCTGCCATGATCTGGCA+GGG | + | chr3.2:89388538-89388557 | None:intergenic | 55.0% | |
| GCATGCGCAACAATCGCAAG+AGG | + | chr3.2:89387992-89388011 | None:intergenic | 55.0% | |
| GGGAGGAGAAAGAGAGAGGT+AGG | + | chr3.2:89386922-89386941 | None:intergenic | 55.0% | |
| GTTGAGAAGGCAAGGAAGGC+TGG | - | chr3.2:89388821-89388840 | MS.gene42327:intron | 55.0% | |
| TCAGATGTCTGGGCCAGCAT+GGG | - | chr3.2:89388908-89388927 | MS.gene42327:intron | 55.0% | |
| TGCAAACATGGGACCTTCCG+AGG | - | chr3.2:89388233-89388252 | MS.gene42327:intron | 55.0% | |
| TGCTGCCAATGCCAAGTCCT+CGG | + | chr3.2:89388253-89388272 | None:intergenic | 55.0% | |
| TTCAGATGTCTGGGCCAGCA+TGG | - | chr3.2:89388907-89388926 | MS.gene42327:intron | 55.0% | |
| TTCTCGGACCCTGCGTATGT+GGG | - | chr3.2:89389372-89389391 | MS.gene42327:CDS | 55.0% | |
| ! | AACCGGCTTCACTTCGGGAT+AGG | - | chr3.2:89387742-89387761 | MS.gene42327:intron | 55.0% |
| ! | ACCGGCTTCACTTCGGGATA+GGG | - | chr3.2:89387743-89387762 | MS.gene42327:intron | 55.0% |
| ! | AGGAGCAACCGGCTTCACTT+CGG | - | chr3.2:89387736-89387755 | MS.gene42327:intron | 55.0% |
| ! | GGGATGTGAATGGCGGAGAT+TGG | + | chr3.2:89386943-89386962 | None:intergenic | 55.0% |
| ! | TGTGAATGGCGGAGATTGGG+AGG | + | chr3.2:89386939-89386958 | None:intergenic | 55.0% |
| !! | AGACAGTTCAGGTTGGGTGG+GGG | - | chr3.2:89389097-89389116 | MS.gene42327:intron | 55.0% |
| !! | GAGGGCTCTAATGCCGACTT+TGG | - | chr3.2:89387918-89387937 | MS.gene42327:intron | 55.0% |
| !! | GGGCTCTAATGCCGACTTTG+GGG | - | chr3.2:89387920-89387939 | MS.gene42327:intron | 55.0% |
| ACCGGTGAGAGGAGATTCGG+CGG | + | chr3.2:89387033-89387052 | None:intergenic | 60.0% | |
| ACTGCTTACCAGCGGAGCGA+GGG | - | chr3.2:89389938-89389957 | MS.gene42327:CDS | 60.0% | |
| AGGTCACGGGTTCAAGTCCC+TGG | - | chr3.2:89389286-89389305 | MS.gene42327:intron | 60.0% | |
| CACATACGCAGGGTCCGAGA+AGG | + | chr3.2:89389373-89389392 | None:intergenic | 60.0% | |
| CAGATGTCTGGGCCAGCATG+GGG | - | chr3.2:89388909-89388928 | MS.gene42327:intron | 60.0% | |
| CATACGCAGGGTCCGAGAAG+GGG | + | chr3.2:89389371-89389390 | None:intergenic | 60.0% | |
| CATGGGACCTTCCGAGGACT+TGG | - | chr3.2:89388239-89388258 | MS.gene42327:intron | 60.0% | |
| CTGCCATGATCTGGCAGGGA+TGG | + | chr3.2:89388534-89388553 | None:intergenic | 60.0% | |
| CTTCTCGGACCCTGCGTATG+TGG | - | chr3.2:89389371-89389390 | MS.gene42327:CDS | 60.0% | |
| GCCAATGCCAAGTCCTCGGA+AGG | + | chr3.2:89388249-89388268 | None:intergenic | 60.0% | |
| GGCATCTGCCATGATCTGGC+AGG | + | chr3.2:89388539-89388558 | None:intergenic | 60.0% | |
| GTCGCGTGGCTGAAAGGTCA+CGG | - | chr3.2:89389272-89389291 | MS.gene42327:intron | 60.0% | |
| TCCGCCGAATCTCCTCTCAC+CGG | - | chr3.2:89387029-89387048 | MS.gene42327:intron | 60.0% | |
| TCGCGTGGCTGAAAGGTCAC+GGG | - | chr3.2:89389273-89389292 | MS.gene42327:intron | 60.0% | |
| TGAGTGGGGTTACCGGTGAG+AGG | + | chr3.2:89387044-89387063 | None:intergenic | 60.0% | |
| ! | GAGGAAAGGAGGACTGGCAG+AGG | + | chr3.2:89389438-89389457 | None:intergenic | 60.0% |
| ! | GGAGCAACCGGCTTCACTTC+GGG | - | chr3.2:89387737-89387756 | MS.gene42327:intron | 60.0% |
| !! | AGTTCAGGTTGGGTGGGGGT+GGG | - | chr3.2:89389101-89389120 | MS.gene42327:intron | 60.0% |
| AGGTTGGGTGGGGGTGGGAT+TGG | - | chr3.2:89389106-89389125 | MS.gene42327:intron | 65.0% | |
| CACTGCTTACCAGCGGAGCG+AGG | - | chr3.2:89389937-89389956 | MS.gene42327:CDS | 65.0% | |
| CTGCTTACCAGCGGAGCGAG+GGG | - | chr3.2:89389939-89389958 | MS.gene42327:CDS | 65.0% | |
| CTGGGCCAGCATGGGGCAAA+AGG | - | chr3.2:89388916-89388935 | MS.gene42327:intron | 65.0% | |
| GCGAGGGGTGGAAGTGACTG+AGG | - | chr3.2:89389954-89389973 | MS.gene42327:CDS | 65.0% | |
| !! | CAGTTCAGGTTGGGTGGGGG+TGG | - | chr3.2:89389100-89389119 | MS.gene42327:intron | 65.0% |
| ACTTCCACCCCTCGCTCCGC+TGG | + | chr3.2:89389949-89389968 | None:intergenic | 70.0% | |
| CTTACCAGCGGAGCGAGGGG+TGG | - | chr3.2:89389942-89389961 | MS.gene42327:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 89386864 | 89390071 | 89386864 | ID=MS.gene42327 |
| chr3.2 | mRNA | 89386864 | 89390071 | 89386864 | ID=MS.gene42327.t1;Parent=MS.gene42327 |
| chr3.2 | exon | 89389885 | 89390071 | 89389885 | ID=MS.gene42327.t1.exon1;Parent=MS.gene42327.t1 |
| chr3.2 | CDS | 89389885 | 89390071 | 89389885 | ID=cds.MS.gene42327.t1;Parent=MS.gene42327.t1 |
| chr3.2 | exon | 89389343 | 89389683 | 89389343 | ID=MS.gene42327.t1.exon2;Parent=MS.gene42327.t1 |
| chr3.2 | CDS | 89389343 | 89389683 | 89389343 | ID=cds.MS.gene42327.t1;Parent=MS.gene42327.t1 |
| chr3.2 | exon | 89388335 | 89388466 | 89388335 | ID=MS.gene42327.t1.exon3;Parent=MS.gene42327.t1 |
| chr3.2 | CDS | 89388335 | 89388466 | 89388335 | ID=cds.MS.gene42327.t1;Parent=MS.gene42327.t1 |
| chr3.2 | exon | 89387956 | 89388231 | 89387956 | ID=MS.gene42327.t1.exon4;Parent=MS.gene42327.t1 |
| chr3.2 | CDS | 89387956 | 89388231 | 89387956 | ID=cds.MS.gene42327.t1;Parent=MS.gene42327.t1 |
| chr3.2 | exon | 89386864 | 89387046 | 89386864 | ID=MS.gene42327.t1.exon5;Parent=MS.gene42327.t1 |
| chr3.2 | CDS | 89386864 | 89387046 | 89386864 | ID=cds.MS.gene42327.t1;Parent=MS.gene42327.t1 |
| Gene Sequence |
| Protein sequence |
