AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43038

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43038.t1 MTR_2g086500 100.000 216 0 0 1 216 1 216 3.83e-159 438
MS.gene43038.t1 MTR_5g012930 99.074 216 2 0 1 216 1 216 5.64e-158 436
MS.gene43038.t1 MTR_3g070930 98.611 216 3 0 1 216 1 216 1.87e-157 434
MS.gene43038.t1 MTR_3g070930 97.692 130 3 0 1 130 1 130 1.64e-89 260
MS.gene43038.t1 MTR_1g098350 72.527 91 4 1 39 129 47 116 2.30e-20 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43038.t1 AT1G08360 89.815 216 22 0 1 216 1 216 7.05e-130 365
MS.gene43038.t1 AT2G27530 89.352 216 23 0 1 216 1 216 3.57e-129 363
MS.gene43038.t1 AT2G27530 89.352 216 23 0 1 216 1 216 3.57e-129 363
MS.gene43038.t1 AT5G22440 89.862 217 21 1 1 216 1 217 8.15e-128 359
MS.gene43038.t1 AT5G22440 89.862 217 21 1 1 216 1 217 8.15e-128 359

Find 46 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACACTCAGTTGTACATTT+TGG 0.225251 2.4:+13762632 None:intergenic
TAAGCAGATTCCCCGCCTTT+TGG 0.257203 2.4:-13763261 MS.gene43038:CDS
CCTTAGCCTCAAGAGATTCT+TGG 0.279927 2.4:+13762752 None:intergenic
CAAGAAACTGGTGAAGAAAT+TGG 0.281282 2.4:-13763324 MS.gene43038:CDS
AACAGCTTCAGAAGCTAAAA+AGG 0.292055 2.4:+13763286 None:intergenic
AAGCATGCAAATCTTCATCT+TGG 0.411943 2.4:+13764002 None:intergenic
GAGACCAGGGCCCAAAAGGC+GGG 0.444250 2.4:+13763250 None:intergenic
GCTGTGAGAGAAGCTATTAC+AGG 0.444577 2.4:-13764159 MS.gene43038:CDS
ATATTGTAGGCTGAGAAAAT+AGG 0.447504 2.4:-13763392 MS.gene43038:intron
AGCTGTTGGCAATGTCAGTA+TGG 0.454854 2.4:-13762671 MS.gene43038:CDS
GAGACTATTGAACTCCAGAT+TGG 0.463448 2.4:-13764096 MS.gene43038:CDS
CGTAGTTCTTAAGACCAATC+TGG 0.467027 2.4:+13764082 None:intergenic
AAGATGAAGATTTGCATGCT+TGG 0.474267 2.4:-13764000 MS.gene43038:CDS
CCAAGAATCTCTTGAGGCTA+AGG 0.480487 2.4:-13762752 MS.gene43038:CDS
TGTTGAGACCAGGGCCCAAA+AGG 0.486519 2.4:+13763246 None:intergenic
AGCATGCAAATCTTCATCTT+GGG 0.497546 2.4:+13764003 None:intergenic
GGCTAAGGTTAATGAGACTA+AGG 0.505363 2.4:-13762737 MS.gene43038:CDS
TAAGAACTACGACCCACAAA+AGG 0.507014 2.4:-13764070 MS.gene43038:CDS
AGAAGCTATTACAGGAATCA+TGG 0.507152 2.4:-13764151 MS.gene43038:CDS
GGCCCTGGTCTCAACAAGGC+AGG 0.511007 2.4:-13763239 MS.gene43038:intron
TGCACAGCACCTTCTTAAGC+TGG 0.524094 2.4:+13762701 None:intergenic
GAAAATAGGATTGGAATCGA+TGG 0.526298 2.4:-13763378 MS.gene43038:CDS
GTGCCTGCCTTGTTGAGACC+AGG 0.526412 2.4:+13763236 None:intergenic
GCTTAAGAAGGTGCTGTGCA+TGG 0.529970 2.4:-13762698 MS.gene43038:CDS
GTAGGCTGAGAAAATAGGAT+TGG 0.543381 2.4:-13763387 MS.gene43038:intron
CTTAAGAAGGTGCTGTGCAT+GGG 0.555283 2.4:-13762697 MS.gene43038:CDS
CTTGTATCTGAAAAGTTCGA+TGG 0.557140 2.4:-13762138 MS.gene43038:CDS
GGTTAATGAGACTAAGGCTA+TGG 0.560588 2.4:-13762731 MS.gene43038:CDS
CAAATCTTCATCTTGGGTCG+AGG 0.562426 2.4:+13764009 None:intergenic
TGAGACCAGGGCCCAAAAGG+CGG 0.562642 2.4:+13763249 None:intergenic
AGGAATGTGAGGCAATTTGA+CGG 0.562721 2.4:+13764029 None:intergenic
TTTGGGCCCTGGTCTCAACA+AGG 0.563100 2.4:-13763243 MS.gene43038:CDS
TAGCCTCAAGAGATTCTTGG+TGG 0.564785 2.4:+13762755 None:intergenic
AGACCAGGGCCCAAAAGGCG+GGG 0.568858 2.4:+13763251 None:intergenic
GGTCAAGTTCCAGCTTAAGA+AGG 0.572000 2.4:-13762710 MS.gene43038:CDS
TCTTGGTGGGAGACAAGTGT+AGG 0.578834 2.4:+13762769 None:intergenic
CAAAAGGATAAGCGTTTCAG+TGG 0.592129 2.4:-13764054 MS.gene43038:CDS
CTGTGCATGGGAGTAGCTGT+TGG 0.601108 2.4:-13762685 MS.gene43038:CDS
TGCCTGCCTTGTTGAGACCA+GGG 0.604300 2.4:+13763237 None:intergenic
ATCTTGGGTCGAGGAATGTG+AGG 0.608945 2.4:+13764018 None:intergenic
TGGAGATGCTCAGCATGTTG+AGG 0.621445 2.4:-13763980 MS.gene43038:CDS
TTGTATCTGAAAAGTTCGAT+GGG 0.623088 2.4:-13762137 MS.gene43038:CDS
CTTGGTGGGAGACAAGTGTA+GGG 0.633232 2.4:+13762770 None:intergenic
AGCCTCAAGAGATTCTTGGT+GGG 0.641849 2.4:+13762756 None:intergenic
AGATGCTCAGCATGTTGAGG+AGG 0.663333 2.4:-13763977 MS.gene43038:intron
CTCCCACCAAGAATCTCTTG+AGG 0.684889 2.4:-13762758 MS.gene43038:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTAAACATTATTTACTA+CGG + chr2.4:13764360-13764379 None:intergenic 15.0%
!! GATTTGAAAATTAATTAGTT+GGG - chr2.4:13762305-13762324 MS.gene43038:intron 15.0%
!! TGATTTGAAAATTAATTAGT+TGG - chr2.4:13762304-13762323 MS.gene43038:intron 15.0%
!!! ATATGTATAGAATGTTTTTA+GGG - chr2.4:13763651-13763670 MS.gene43038:intron 15.0%
!!! ATTTTCAGAATTGTTTAATT+TGG - chr2.4:13764507-13764526 MS.gene43038:intron 15.0%
!!! TATATGTATAGAATGTTTTT+AGG - chr2.4:13763650-13763669 MS.gene43038:intron 15.0%
!!! TGTTTTTAATTTAGTTTTGA+TGG - chr2.4:13763212-13763231 MS.gene43038:intron 15.0%
!! AACAAACTGTATATAACTTT+AGG + chr2.4:13762178-13762197 None:intergenic 20.0%
!! AACTCTAATATGAATATTGT+AGG - chr2.4:13763310-13763329 MS.gene43038:CDS 20.0%
!! ACATTTAGAAAAATCTCTAT+TGG - chr2.4:13763071-13763090 MS.gene43038:intron 20.0%
!! AGCAATTTACTCTAATAAAA+TGG + chr2.4:13764260-13764279 None:intergenic 20.0%
!! GTTAATTGAAAGTAAACAAT+GGG - chr2.4:13762479-13762498 MS.gene43038:intron 20.0%
!! TCAAATAGCACAAAATAAAT+TGG + chr2.4:13762891-13762910 None:intergenic 20.0%
!! TGTTAATTGAAAGTAAACAA+TGG - chr2.4:13762478-13762497 MS.gene43038:intron 20.0%
!! TTAATTGAAAGTAAACAATG+GGG - chr2.4:13762480-13762499 MS.gene43038:intron 20.0%
!!! AACTACTTATTTTCTGAAAT+AGG - chr2.4:13762934-13762953 MS.gene43038:intron 20.0%
!!! TTCTGTTTTAAACCATATTT+CGG + chr2.4:13762331-13762350 None:intergenic 20.0%
! AACTAAATGAAAAAGAAGCA+GGG + chr2.4:13763825-13763844 None:intergenic 25.0%
! AATTTGAAAGGAACATGTTA+TGG + chr2.4:13763870-13763889 None:intergenic 25.0%
! ACATTAGATTTACAGGTAAT+AGG - chr2.4:13764328-13764347 MS.gene43038:intron 25.0%
! ATATTCAACAAGCAAGAAAT+TGG + chr2.4:13763719-13763738 None:intergenic 25.0%
! GAAAGATAAACAAAACATGT+GGG + chr2.4:13763618-13763637 None:intergenic 25.0%
! TAACTAAATGAAAAAGAAGC+AGG + chr2.4:13763826-13763845 None:intergenic 25.0%
! TACTTGATTGAGAAACTATT+AGG - chr2.4:13762279-13762298 MS.gene43038:intron 25.0%
! TCATGTCAAAACATAAAAGA+CGG + chr2.4:13764192-13764211 None:intergenic 25.0%
! TGAAAGATAAACAAAACATG+TGG + chr2.4:13763619-13763638 None:intergenic 25.0%
! TGTCCTTGTTGAAAAAAAAT+TGG - chr2.4:13764115-13764134 MS.gene43038:CDS 25.0%
!! AAATTTTCGGTTTTTCTCTT+TGG + chr2.4:13762596-13762615 None:intergenic 25.0%
!! AATTCTGAAAATTGATATCG+AGG + chr2.4:13764438-13764457 None:intergenic 25.0%
!! CAATAGTCTCAACAAATTTT+CGG + chr2.4:13762609-13762628 None:intergenic 25.0%
!! TGCATTTTTATTGAAGACTT+TGG - chr2.4:13764379-13764398 MS.gene43038:intron 25.0%
!!! AATTCTGAAAATTGATAACG+AGG + chr2.4:13764499-13764518 None:intergenic 25.0%
!!! GATTTTGACATTAGATTTAC+AGG - chr2.4:13764321-13764340 MS.gene43038:intron 25.0%
!!! TGTGCTATTTGAATTGATTT+TGG - chr2.4:13762899-13762918 MS.gene43038:intron 25.0%
!!! TTGCCAATTTTTTTTCAACA+AGG + chr2.4:13764121-13764140 None:intergenic 25.0%
AAGCTACAAAAATGTGAACA+TGG + chr2.4:13762146-13762165 None:intergenic 30.0%
AATTGGAAGACACAAAAATG+AGG + chr2.4:13762874-13762893 None:intergenic 30.0%
ATATTGTAGGCTGAGAAAAT+AGG - chr2.4:13763323-13763342 MS.gene43038:CDS 30.0%
ATGTAAACTTGAATACAACC+AGG + chr2.4:13763677-13763696 None:intergenic 30.0%
ATTAACACAAGAAACTTAGC+AGG + chr2.4:13763284-13763303 None:intergenic 30.0%
ATTGGAAGACACAAAAATGA+GGG + chr2.4:13762873-13762892 None:intergenic 30.0%
GCTAAACAAAAACAAGAAAC+TGG - chr2.4:13763379-13763398 MS.gene43038:CDS 30.0%
TAACAGTATGTTTGAACACA+AGG + chr2.4:13763780-13763799 None:intergenic 30.0%
TCTTCACAAAAGGTTATTTG+AGG + chr2.4:13764405-13764424 None:intergenic 30.0%
TTGGATGATGAGCAATAATA+GGG - chr2.4:13764225-13764244 MS.gene43038:intron 30.0%
TTGTATCTGAAAAGTTCGAT+GGG - chr2.4:13764578-13764597 MS.gene43038:intron 30.0%
TTTGGATGATGAGCAATAAT+AGG - chr2.4:13764224-13764243 MS.gene43038:intron 30.0%
! CTTTGTTGCTGTCTATTTTA+TGG - chr2.4:13764278-13764297 MS.gene43038:intron 30.0%
! TAACACTCAGTTGTACATTT+TGG + chr2.4:13764086-13764105 None:intergenic 30.0%
!! AACATCAGTTTGTTGATTTG+TGG + chr2.4:13763196-13763215 None:intergenic 30.0%
!!! TTTTTTTCAACAAGGACACA+AGG + chr2.4:13764113-13764132 None:intergenic 30.0%
AAAGCAATGACTTCAATCCA+TGG + chr2.4:13764165-13764184 None:intergenic 35.0%
AAATCAGTCTACGCAATAAC+TGG + chr2.4:13763893-13763912 None:intergenic 35.0%
AAATGAAAAAGAAGCAGGGT+TGG + chr2.4:13763821-13763840 None:intergenic 35.0%
AACAGCTTCAGAAGCTAAAA+AGG + chr2.4:13763432-13763451 None:intergenic 35.0%
AAGATGAAGATTTGCATGCT+TGG - chr2.4:13762715-13762734 MS.gene43038:CDS 35.0%
AAGCATGCAAATCTTCATCT+TGG + chr2.4:13762716-13762735 None:intergenic 35.0%
ACATGATGCATCATTGGATT+TGG - chr2.4:13764206-13764225 MS.gene43038:intron 35.0%
AGAAGCTATTACAGGAATCA+TGG - chr2.4:13762564-13762583 MS.gene43038:intron 35.0%
AGCATGCAAATCTTCATCTT+GGG + chr2.4:13762715-13762734 None:intergenic 35.0%
AGTTATTGCGTAGACTGATT+TGG - chr2.4:13763892-13763911 MS.gene43038:intron 35.0%
ATGTAACCGAATCCATTTAG+TGG - chr2.4:13762372-13762391 MS.gene43038:intron 35.0%
ATTGTAACTCTCAAGTTCCT+AGG + chr2.4:13763753-13763772 None:intergenic 35.0%
CAAGAAACTGGTGAAGAAAT+TGG - chr2.4:13763391-13763410 MS.gene43038:intron 35.0%
CATCTAATGCAAGCTATTGT+TGG - chr2.4:13764540-13764559 MS.gene43038:intron 35.0%
CGCAATAACTGGAATTTGAA+AGG + chr2.4:13763882-13763901 None:intergenic 35.0%
CTTGTATCTGAAAAGTTCGA+TGG - chr2.4:13764577-13764596 MS.gene43038:intron 35.0%
GAAAATAGGATTGGAATCGA+TGG - chr2.4:13763337-13763356 MS.gene43038:CDS 35.0%
GTGGATCCAACAAAATAGTT+GGG + chr2.4:13762783-13762802 None:intergenic 35.0%
TAAGTATTCCACTCATACCA+TGG - chr2.4:13764145-13764164 MS.gene43038:CDS 35.0%
TAATTAGTTGGGCCGAAATA+TGG - chr2.4:13762316-13762335 MS.gene43038:intron 35.0%
TACTGCTACATCTTCACAAA+AGG + chr2.4:13764415-13764434 None:intergenic 35.0%
TCTACAGCACTATTGCTTAT+TGG - chr2.4:13763114-13763133 MS.gene43038:intron 35.0%
TGTGGATCCAACAAAATAGT+TGG + chr2.4:13762784-13762803 None:intergenic 35.0%
TTGAAAGGAACATGTTATGG+TGG + chr2.4:13763867-13763886 None:intergenic 35.0%
! CAACAATAGCTTGCATTAGA+TGG + chr2.4:13764542-13764561 None:intergenic 35.0%
! TGAAACGCTTATCCTTTTGT+GGG + chr2.4:13762660-13762679 None:intergenic 35.0%
! TTGTAGCCCAACTATTTTGT+TGG - chr2.4:13762774-13762793 MS.gene43038:CDS 35.0%
!! CTTTTGCCACTAAATGGATT+CGG + chr2.4:13762381-13762400 None:intergenic 35.0%
!! GTTTTGACATGATGCATCAT+TGG - chr2.4:13764200-13764219 MS.gene43038:intron 35.0%
!!! TATAGAATGTTTTTAGGGCC+TGG - chr2.4:13763656-13763675 MS.gene43038:intron 35.0%
ACTTCAATCCATGGTATGAG+TGG + chr2.4:13764156-13764175 None:intergenic 40.0%
AGGAATGTGAGGCAATTTGA+CGG + chr2.4:13762689-13762708 None:intergenic 40.0%
CAAAAGGATAAGCGTTTCAG+TGG - chr2.4:13762661-13762680 MS.gene43038:CDS 40.0%
CAACAAGCAAGAAATTGGTG+TGG + chr2.4:13763714-13763733 None:intergenic 40.0%
CCACATGTAGTTGGTTGAAA+TGG - chr2.4:13762799-13762818 MS.gene43038:intron 40.0%
CCATTTCAACCAACTACATG+TGG + chr2.4:13762802-13762821 None:intergenic 40.0%
CGTAGTTCTTAAGACCAATC+TGG + chr2.4:13762636-13762655 None:intergenic 40.0%
CTTCAGAAGCTAAAAAGGCA+TGG + chr2.4:13763427-13763446 None:intergenic 40.0%
GAATATCAGTCTGATTGCCT+AGG - chr2.4:13763733-13763752 MS.gene43038:intron 40.0%
GAGACTATTGAACTCCAGAT+TGG - chr2.4:13762619-13762638 MS.gene43038:CDS 40.0%
GGCTAAGGTTAATGAGACTA+AGG - chr2.4:13763978-13763997 MS.gene43038:CDS 40.0%
GGTTAATGAGACTAAGGCTA+TGG - chr2.4:13763984-13764003 MS.gene43038:CDS 40.0%
GTAGGCTGAGAAAATAGGAT+TGG - chr2.4:13763328-13763347 MS.gene43038:CDS 40.0%
TAAGAACTACGACCCACAAA+AGG - chr2.4:13762645-13762664 MS.gene43038:CDS 40.0%
TCCATTTAGTGGCAAAAGCT+TGG - chr2.4:13762383-13762402 MS.gene43038:intron 40.0%
TGACTTTGCATTATGTGCTG+AGG - chr2.4:13763238-13763257 MS.gene43038:intron 40.0%
TTGTTGGATCCACATGTAGT+TGG - chr2.4:13762790-13762809 MS.gene43038:intron 40.0%
! ACCAAGCTTTTGCCACTAAA+TGG + chr2.4:13762387-13762406 None:intergenic 40.0%
! CTGAAACGCTTATCCTTTTG+TGG + chr2.4:13762661-13762680 None:intergenic 40.0%
!!! AGGCACGTGTTTTGTTTTTG+GGG - chr2.4:13763496-13763515 MS.gene43038:intron 40.0%
!!! CAGGCACGTGTTTTGTTTTT+GGG - chr2.4:13763495-13763514 MS.gene43038:intron 40.0%
!!! CTGCTATTTTCTGCATTCCA+CGG - chr2.4:13763149-13763168 MS.gene43038:intron 40.0%
!!! TGCTATTTTCTGCATTCCAC+GGG - chr2.4:13763150-13763169 MS.gene43038:intron 40.0%
AGCAAGAAATTGGTGTGGTC+TGG + chr2.4:13763709-13763728 None:intergenic 45.0%
AGCCTCAAGAGATTCTTGGT+GGG + chr2.4:13763962-13763981 None:intergenic 45.0%
AGCTGTTGGCAATGTCAGTA+TGG - chr2.4:13764044-13764063 MS.gene43038:CDS 45.0%
CAAATCTTCATCTTGGGTCG+AGG + chr2.4:13762709-13762728 None:intergenic 45.0%
CCAAGAATCTCTTGAGGCTA+AGG - chr2.4:13763963-13763982 MS.gene43038:intron 45.0%
CCTTAGCCTCAAGAGATTCT+TGG + chr2.4:13763966-13763985 None:intergenic 45.0%
GCAAGAAATTGGTGTGGTCT+GGG + chr2.4:13763708-13763727 None:intergenic 45.0%
GCTGTGAGAGAAGCTATTAC+AGG - chr2.4:13762556-13762575 MS.gene43038:intron 45.0%
GGTCAAGTTCCAGCTTAAGA+AGG - chr2.4:13764005-13764024 MS.gene43038:CDS 45.0%
GTAGGGAACTTTCCTGCAAA+GGG + chr2.4:13763931-13763950 None:intergenic 45.0%
TAGCCTCAAGAGATTCTTGG+TGG + chr2.4:13763963-13763982 None:intergenic 45.0%
TATTCTGTCTGTCCCTTTGC+AGG - chr2.4:13763916-13763935 MS.gene43038:intron 45.0%
TGTAGGGAACTTTCCTGCAA+AGG + chr2.4:13763932-13763951 None:intergenic 45.0%
! TAAATCAATTTTGCCGCCCG+TGG + chr2.4:13763169-13763188 None:intergenic 45.0%
! TATTTTCTGCATTCCACGGG+CGG - chr2.4:13763153-13763172 MS.gene43038:intron 45.0%
! TGCAAGCTATTGTTGGTTGC+AGG - chr2.4:13764547-13764566 MS.gene43038:intron 45.0%
!! CTTAAGAAGGTGCTGTGCAT+GGG - chr2.4:13764018-13764037 MS.gene43038:CDS 45.0%
!!! GCAGGCACGTGTTTTGTTTT+TGG - chr2.4:13763494-13763513 MS.gene43038:intron 45.0%
AGATGCTCAGCATGTTGAGG+AGG - chr2.4:13762738-13762757 MS.gene43038:CDS 50.0%
ATCTTGGGTCGAGGAATGTG+AGG + chr2.4:13762700-13762719 None:intergenic 50.0%
CTCCCACCAAGAATCTCTTG+AGG - chr2.4:13763957-13763976 MS.gene43038:intron 50.0%
CTTGGTGGGAGACAAGTGTA+GGG + chr2.4:13763948-13763967 None:intergenic 50.0%
TCTTGGTGGGAGACAAGTGT+AGG + chr2.4:13763949-13763968 None:intergenic 50.0%
TGCACAGCACCTTCTTAAGC+TGG + chr2.4:13764017-13764036 None:intergenic 50.0%
TGGAGATGCTCAGCATGTTG+AGG - chr2.4:13762735-13762754 MS.gene43038:CDS 50.0%
! AAGCAGATTCCCCGCCTTTT+GGG - chr2.4:13763455-13763474 MS.gene43038:intron 50.0%
! TAAGCAGATTCCCCGCCTTT+TGG - chr2.4:13763454-13763473 MS.gene43038:intron 50.0%
!! GCTTAAGAAGGTGCTGTGCA+TGG - chr2.4:13764017-13764036 MS.gene43038:CDS 50.0%
CTGTGCATGGGAGTAGCTGT+TGG - chr2.4:13764030-13764049 MS.gene43038:CDS 55.0%
TGTTGAGACCAGGGCCCAAA+AGG + chr2.4:13763472-13763491 None:intergenic 55.0%
TTTGGGCCCTGGTCTCAACA+AGG - chr2.4:13763472-13763491 MS.gene43038:intron 55.0%
! TGCCTGCCTTGTTGAGACCA+GGG + chr2.4:13763481-13763500 None:intergenic 55.0%
TGAGACCAGGGCCCAAAAGG+CGG + chr2.4:13763469-13763488 None:intergenic 60.0%
! GTGCCTGCCTTGTTGAGACC+AGG + chr2.4:13763482-13763501 None:intergenic 60.0%
AGACCAGGGCCCAAAAGGCG+GGG + chr2.4:13763467-13763486 None:intergenic 65.0%
GAGACCAGGGCCCAAAAGGC+GGG + chr2.4:13763468-13763487 None:intergenic 65.0%
GGCCCTGGTCTCAACAAGGC+AGG - chr2.4:13763476-13763495 MS.gene43038:intron 65.0%
! ATTCCCCGCCTTTTGGGCCC+TGG - chr2.4:13763461-13763480 MS.gene43038:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 13762115 13764622 13762115 ID=MS.gene43038
chr2.4 mRNA 13762115 13764622 13762115 ID=MS.gene43038.t1;Parent=MS.gene43038
chr2.4 exon 13764618 13764622 13764618 ID=MS.gene43038.t1.exon1;Parent=MS.gene43038.t1
chr2.4 CDS 13764618 13764622 13764618 ID=cds.MS.gene43038.t1;Parent=MS.gene43038.t1
chr2.4 exon 13763978 13764197 13763978 ID=MS.gene43038.t1.exon2;Parent=MS.gene43038.t1
chr2.4 CDS 13763978 13764197 13763978 ID=cds.MS.gene43038.t1;Parent=MS.gene43038.t1
chr2.4 exon 13763240 13763405 13763240 ID=MS.gene43038.t1.exon3;Parent=MS.gene43038.t1
chr2.4 CDS 13763240 13763405 13763240 ID=cds.MS.gene43038.t1;Parent=MS.gene43038.t1
chr2.4 exon 13762594 13762799 13762594 ID=MS.gene43038.t1.exon4;Parent=MS.gene43038.t1
chr2.4 CDS 13762594 13762799 13762594 ID=cds.MS.gene43038.t1;Parent=MS.gene43038.t1
chr2.4 exon 13762115 13762168 13762115 ID=MS.gene43038.t1.exon5;Parent=MS.gene43038.t1
chr2.4 CDS 13762115 13762168 13762115 ID=cds.MS.gene43038.t1;Parent=MS.gene43038.t1
Gene Sequence

>MS.gene43038

ATGAGGTATTTTTTTCTCTTCTATTTGTCCATGTTCACATTTTTGTAGCTTTTTTTTTATCCTAAAGTTATATACAGTTTGTTGTTTTTCATTGATGATTTAACTTTAGTTCTATTAGATTTTGATCGTGTTAGTGAAAATAATTCAATAATTGTTGTTTTTCTTACTTGATTGAGAAACTATTAGGAATGATTTGAAAATTAATTAGTTGGGCCGAAATATGGTTTAAAACAGAACATTATGACATAATTTGATTCATGTAACCGAATCCATTTAGTGGCAAAAGCTTGGTTGTTGTTTTTGTTGTCGTTGTTGATTGAGCTTTGTTTAATGTATTTATGATTTATAATGTGTTAATGAAAATGTTAATTGAAAGTAAACAATGGGGTATTCGAAGATTTAATGTTTTTGATGTGATTTTGCAGTAAGCTTCAGAGTGAAGCTGTGAGAGAAGCTATTACAGGAATCATGGCTGATTCCAAAGAGAAAAACCGAAAATTTGTTGAGACTATTGAACTCCAGATTGGTCTTAAGAACTACGACCCACAAAAGGATAAGCGTTTCAGTGGTTCCGTCAAATTGCCTCACATTCCTCGACCCAAGATGAAGATTTGCATGCTTGGAGATGCTCAGCATGTTGAGGAGGTAATAATTTGATCTTGTAGCCCAACTATTTTGTTGGATCCACATGTAGTTGGTTGAAATGGTTAATGCTTAATTGAAGTGAATTTGAGTTTCATATGCGTGCATTATTACCCTCATTTTTGTGTCTTCCAATTTATTTTGTGCTATTTGAATTGATTTTGGTTGTTTGCTAGTAACTACTTATTTTCTGAAATAGGCTGAAACGATGTTTGTATCTTATTTTATACAGTAACTACAATTCATGAGCATAATGTTTTTCATTTAGTGTTGATGATTGTGATCTTACATCGTTTACTTAGAATAACTTTTTAACATTTAGAAAAATCTCTATTGGTCATTGATTTTATTAGTGAATCTACAGCACTATTGCTTATTGGAATTTTAACAATCTGCTATTTTCTGCATTCCACGGGCGGCAAAATTGATTTAGCAACCACAAATCAACAAACTGATGTTTTTAATTTAGTTTTGATGGTAGTGACTTTGCATTATGTGCTGAGGATAATTTTGAATATTTGTTTCCTGCTAAGTTTCTTGTGTTAATGTCTTAAACTCTAATATGAATATTGTAGGCTGAGAAAATAGGATTGGAATCGATGGATGTTGAAGCTTTGAAGAAGCTAAACAAAAACAAGAAACTGGTGAAGAAATTGGCAAAGAAGTACCATGCCTTTTTAGCTTCTGAAGCTGTTATTAAGCAGATTCCCCGCCTTTTGGGCCCTGGTCTCAACAAGGCAGGCACGTGTTTTGTTTTTGGGGTTTTTGTGTTTTGAACTCTTTTACATTTCAAGAATATTGTGTTTTTCTTCTGTTTTTATTATCTGTTTTGCATTGCTGTCTTTTTCTTTGTACATGCCCACATGTTTTGTTTATCTTTCATGTTTGAGTTCTATATGTATAGAATGTTTTTAGGGCCTGGTTGTATTCAAGTTTACATTGTGTTCACCCAGACCACACCAATTTCTTGCTTGTTGAATATCAGTCTGATTGCCTAGGAACTTGAGAGTTACAATTGTACCTTGTGTTCAAACATACTGTTACATTACTTCAAAGAACTGCCAACCCTGCTTCTTTTTCATTTAGTTAGCAGCTTATTTCAAAGAACCACCATAACATGTTCCTTTCAAATTCCAGTTATTGCGTAGACTGATTTGGATATTCTGTCTGTCCCTTTGCAGGAAAGTTCCCTACACTTGTCTCCCACCAAGAATCTCTTGAGGCTAAGGTTAATGAGACTAAGGCTATGGTCAAGTTCCAGCTTAAGAAGGTGCTGTGCATGGGAGTAGCTGTTGGCAATGTCAGTATGGATGAAAAGCAAATCTTCCAAAATGTACAACTGAGTGTTAACTTCCTTGTGTCCTTGTTGAAAAAAAATTGGCAAAATGTAAGTATTCCACTCATACCATGGATTGAAGTCATTGCTTTGTTACCGTCTTTTATGTTTTGACATGATGCATCATTGGATTTGGATGATGAGCAATAATAGGGCTATAACATCCATTTTATTAGAGTAAATTGCTTTGTTGCTGTCTATTTTATGGTTTGACGTGATGCATCATTAGATTTTGACATTAGATTTACAGGTAATAGGCAAAATCCGTAGTAAATAATGTTTAGTTTGCATTTTTATTGAAGACTTTGGCCTCAAATAACCTTTTGTGAAGATGTAGCAGTACCTCGATATCAATTTTCAGAATTTATGTTCTTCAGTTGTGCTGTTGAGAATTGCTTTTGCTCCTCGTTATCAATTTTCAGAATTGTTTAATTTGGTTAAAACTGCCATCTAATGCAAGCTATTGTTGGTTGCAGGTTAGATGCTTGTATCTGAAAAGTTCGATGGGCAAATCTTACCGTGTCTTTTAA
Protein sequence

>MS.gene43038.t1

MSKLQSEAVREAITGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKSYRVF