Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44437.t1 | XP_024636092.1 | 97.4 | 659 | 13 | 3 | 1 | 656 | 1 | 658 | 0.00E+00 | 1239.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44437.t1 | Q38914 | 52.6 | 498 | 147 | 13 | 67 | 534 | 65 | 503 | 1.6e-115 | 418.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44437.t1 | A0A396IBY7 | 97.4 | 659 | 13 | 3 | 1 | 656 | 1 | 658 | 0.0e+00 | 1239.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene44437.t1 | TF | AP2/ERF-AP2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene44437 | 0.811679 | 6.21E-51 | -1.69E-46 |
| MS.gene049350 | MS.gene44437 | 0.831504 | 1.61E-55 | -1.69E-46 |
| MS.gene049418 | MS.gene44437 | 0.811362 | 7.27E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene44437 | 0.826479 | 2.65E-54 | -1.69E-46 |
| MS.gene049711 | MS.gene44437 | 0.830193 | 3.37E-55 | -1.69E-46 |
| MS.gene049807 | MS.gene44437 | 0.801551 | 8.54E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene44437 | 0.801167 | 1.02E-48 | -1.69E-46 |
| MS.gene05045 | MS.gene44437 | 0.816648 | 4.96E-52 | -1.69E-46 |
| MS.gene050901 | MS.gene44437 | 0.804144 | 2.49E-49 | -1.69E-46 |
| MS.gene051018 | MS.gene44437 | 0.836051 | 1.17E-56 | -1.69E-46 |
| MS.gene051648 | MS.gene44437 | 0.814045 | 1.88E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene44437 | 0.838038 | 3.65E-57 | -1.69E-46 |
| MS.gene051700 | MS.gene44437 | 0.80377 | 2.98E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene44437 | 0.829656 | 4.56E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene44437 | 0.861383 | 1.07E-63 | -1.69E-46 |
| MS.gene051744 | MS.gene44437 | 0.818494 | 1.90E-52 | -1.69E-46 |
| MS.gene053122 | MS.gene44437 | 0.84268 | 2.23E-58 | -1.69E-46 |
| MS.gene053144 | MS.gene44437 | 0.859538 | 3.86E-63 | -1.69E-46 |
| MS.gene053226 | MS.gene44437 | 0.836922 | 7.04E-57 | -1.69E-46 |
| MS.gene053536 | MS.gene44437 | 0.861774 | 8.10E-64 | -1.69E-46 |
| MS.gene053538 | MS.gene44437 | 0.860996 | 1.40E-63 | -1.69E-46 |
| MS.gene053540 | MS.gene44437 | 0.831733 | 1.41E-55 | -1.69E-46 |
| MS.gene053599 | MS.gene44437 | 0.804263 | 2.35E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene44437 | 0.827337 | 1.65E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene44437 | 0.857732 | 1.34E-62 | -1.69E-46 |
| MS.gene055465 | MS.gene44437 | 0.844759 | 6.20E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene44437 | 0.826892 | 2.11E-54 | -1.69E-46 |
| MS.gene055468 | MS.gene44437 | 0.829464 | 5.07E-55 | -1.69E-46 |
| MS.gene055537 | MS.gene44437 | 0.867512 | 1.30E-65 | -1.69E-46 |
| MS.gene055580 | MS.gene44437 | -0.840097 | 1.07E-57 | -1.69E-46 |
| MS.gene055764 | MS.gene44437 | 0.815053 | 1.13E-51 | -1.69E-46 |
| MS.gene056005 | MS.gene44437 | 0.808677 | 2.75E-50 | -1.69E-46 |
| MS.gene056043 | MS.gene44437 | -0.814064 | 1.86E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene44437 | 0.811743 | 6.01E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene44437 | 0.80539 | 1.37E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene44437 | 0.811793 | 5.86E-51 | -1.69E-46 |
| MS.gene05894 | MS.gene44437 | 0.851344 | 9.43E-61 | -1.69E-46 |
| MS.gene059424 | MS.gene44437 | 0.845663 | 3.53E-59 | -1.69E-46 |
| MS.gene059425 | MS.gene44437 | 0.800051 | 1.73E-48 | -1.69E-46 |
| MS.gene059625 | MS.gene44437 | 0.814428 | 1.55E-51 | -1.69E-46 |
| MS.gene060519 | MS.gene44437 | 0.825556 | 4.39E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44437.t1 | MTR_4g097520 | 96.965 | 659 | 13 | 4 | 1 | 656 | 1 | 655 | 0.0 | 1327 |
| MS.gene44437.t1 | MTR_3g103460 | 53.043 | 690 | 256 | 24 | 1 | 655 | 1 | 657 | 0.0 | 558 |
| MS.gene44437.t1 | MTR_1g017400 | 51.234 | 689 | 274 | 23 | 1 | 656 | 1 | 660 | 0.0 | 534 |
| MS.gene44437.t1 | MTR_5g015070 | 48.755 | 683 | 184 | 28 | 1 | 656 | 1 | 544 | 6.43e-172 | 501 |
| MS.gene44437.t1 | MTR_8g020510 | 46.964 | 494 | 181 | 11 | 18 | 495 | 3 | 431 | 1.97e-126 | 386 |
| MS.gene44437.t1 | MTR_4g127930 | 73.394 | 218 | 58 | 0 | 293 | 510 | 143 | 360 | 1.04e-115 | 356 |
| MS.gene44437.t1 | MTR_4g065370 | 57.547 | 318 | 108 | 5 | 248 | 560 | 121 | 416 | 1.10e-115 | 357 |
| MS.gene44437.t1 | MTR_7g080460 | 75.814 | 215 | 43 | 1 | 298 | 503 | 248 | 462 | 1.22e-111 | 351 |
| MS.gene44437.t1 | MTR_2g098180 | 67.073 | 246 | 79 | 2 | 300 | 544 | 158 | 402 | 4.43e-110 | 342 |
| MS.gene44437.t1 | MTR_8g068510 | 60.232 | 259 | 85 | 5 | 240 | 494 | 69 | 313 | 6.96e-98 | 306 |
| MS.gene44437.t1 | MTR_5g031880 | 80.108 | 186 | 34 | 1 | 300 | 485 | 215 | 397 | 7.45e-95 | 302 |
| MS.gene44437.t1 | MTR_4g130270 | 71.598 | 169 | 48 | 0 | 308 | 476 | 46 | 214 | 2.06e-84 | 270 |
| MS.gene44437.t1 | MTR_7g009410 | 62.366 | 186 | 66 | 2 | 291 | 476 | 48 | 229 | 6.71e-75 | 246 |
| MS.gene44437.t1 | MTR_2g460730 | 62.189 | 201 | 61 | 3 | 278 | 476 | 24 | 211 | 1.86e-74 | 243 |
| MS.gene44437.t1 | MTR_6g011490 | 63.102 | 187 | 66 | 1 | 290 | 476 | 42 | 225 | 1.32e-73 | 241 |
| MS.gene44437.t1 | MTR_8g044070 | 62.570 | 179 | 63 | 2 | 308 | 486 | 54 | 228 | 1.18e-71 | 238 |
| MS.gene44437.t1 | MTR_8g468920 | 51.822 | 247 | 114 | 3 | 262 | 508 | 23 | 264 | 4.79e-71 | 236 |
| MS.gene44437.t1 | MTR_4g007770 | 68.639 | 169 | 50 | 1 | 308 | 476 | 35 | 200 | 5.62e-71 | 233 |
| MS.gene44437.t1 | MTR_8g044040 | 50.806 | 248 | 111 | 5 | 308 | 554 | 55 | 292 | 1.64e-66 | 223 |
| MS.gene44437.t1 | MTR_4g094868 | 54.762 | 168 | 65 | 3 | 312 | 479 | 176 | 332 | 3.75e-45 | 169 |
| MS.gene44437.t1 | MTR_4g094868 | 54.762 | 168 | 65 | 3 | 312 | 479 | 176 | 332 | 3.87e-45 | 169 |
| MS.gene44437.t1 | MTR_5g016810 | 54.762 | 168 | 65 | 3 | 312 | 479 | 152 | 308 | 2.34e-44 | 166 |
| MS.gene44437.t1 | MTR_4g061200 | 50.857 | 175 | 75 | 3 | 312 | 486 | 131 | 294 | 1.49e-43 | 161 |
| MS.gene44437.t1 | MTR_4g061200 | 50.857 | 175 | 75 | 3 | 312 | 486 | 131 | 294 | 1.27e-42 | 160 |
| MS.gene44437.t1 | MTR_7g100590 | 51.786 | 168 | 70 | 3 | 312 | 479 | 139 | 295 | 2.28e-42 | 160 |
| MS.gene44437.t1 | MTR_2g093060 | 52.381 | 168 | 69 | 3 | 312 | 479 | 134 | 290 | 4.38e-42 | 159 |
| MS.gene44437.t1 | MTR_2g093060 | 52.381 | 168 | 69 | 3 | 312 | 479 | 134 | 290 | 4.48e-42 | 159 |
| MS.gene44437.t1 | MTR_5g016810 | 52.299 | 174 | 66 | 4 | 312 | 479 | 152 | 314 | 1.15e-41 | 159 |
| MS.gene44437.t1 | MTR_7g091390 | 63.077 | 130 | 40 | 2 | 307 | 436 | 55 | 176 | 8.18e-41 | 154 |
| MS.gene44437.t1 | MTR_4g094868 | 56.204 | 137 | 59 | 1 | 343 | 479 | 41 | 176 | 2.43e-37 | 143 |
| MS.gene44437.t1 | MTR_4g061200 | 46.857 | 175 | 67 | 4 | 312 | 486 | 131 | 279 | 2.24e-35 | 138 |
| MS.gene44437.t1 | MTR_4g061200 | 46.857 | 175 | 67 | 4 | 312 | 486 | 131 | 279 | 1.91e-34 | 137 |
| MS.gene44437.t1 | MTR_2g093060 | 48.214 | 168 | 61 | 4 | 312 | 479 | 134 | 275 | 6.49e-34 | 135 |
| MS.gene44437.t1 | MTR_7g061190 | 48.252 | 143 | 73 | 1 | 344 | 486 | 3 | 144 | 8.06e-30 | 115 |
| MS.gene44437.t1 | MTR_7g091390 | 63.736 | 91 | 28 | 1 | 346 | 436 | 3 | 88 | 1.48e-24 | 105 |
| MS.gene44437.t1 | MTR_1g049140 | 40.972 | 144 | 74 | 3 | 288 | 431 | 113 | 245 | 1.11e-19 | 89.4 |
| MS.gene44437.t1 | MTR_1g049140 | 40.972 | 144 | 74 | 3 | 288 | 431 | 113 | 245 | 1.50e-19 | 91.7 |
| MS.gene44437.t1 | MTR_1g049140 | 40.972 | 144 | 74 | 3 | 288 | 431 | 113 | 245 | 5.39e-19 | 89.4 |
| MS.gene44437.t1 | MTR_3g090510 | 47.170 | 106 | 55 | 1 | 350 | 455 | 163 | 267 | 6.97e-19 | 89.7 |
| MS.gene44437.t1 | MTR_7g060560 | 44.340 | 106 | 57 | 2 | 350 | 455 | 156 | 259 | 1.88e-15 | 79.3 |
| MS.gene44437.t1 | MTR_1g090290 | 36.207 | 116 | 62 | 4 | 265 | 380 | 69 | 172 | 1.08e-11 | 64.7 |
| MS.gene44437.t1 | MTR_4g086190 | 36.449 | 107 | 63 | 3 | 415 | 518 | 96 | 200 | 1.81e-11 | 65.1 |
| MS.gene44437.t1 | MTR_1g028560 | 49.315 | 73 | 36 | 1 | 399 | 471 | 99 | 170 | 1.96e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44437.t1 | AT4G37750 | 51.504 | 565 | 181 | 18 | 1 | 534 | 1 | 503 | 1.78e-161 | 475 |
| MS.gene44437.t1 | AT1G72570 | 72.951 | 244 | 63 | 2 | 252 | 494 | 164 | 405 | 1.22e-123 | 373 |
| MS.gene44437.t1 | AT5G57390 | 84.574 | 188 | 28 | 1 | 300 | 487 | 73 | 259 | 6.07e-115 | 352 |
| MS.gene44437.t1 | AT1G51190 | 67.717 | 254 | 77 | 3 | 248 | 499 | 128 | 378 | 9.87e-115 | 355 |
| MS.gene44437.t1 | AT3G20840 | 66.540 | 263 | 59 | 4 | 248 | 499 | 125 | 369 | 6.03e-114 | 353 |
| MS.gene44437.t1 | AT5G57390 | 84.574 | 188 | 28 | 1 | 300 | 487 | 191 | 377 | 6.13e-114 | 353 |
| MS.gene44437.t1 | AT5G17430 | 64.260 | 277 | 83 | 4 | 300 | 570 | 136 | 402 | 1.26e-111 | 346 |
| MS.gene44437.t1 | AT5G17430 | 64.260 | 277 | 83 | 4 | 300 | 570 | 198 | 464 | 2.26e-111 | 347 |
| MS.gene44437.t1 | AT5G65510 | 58.182 | 275 | 99 | 2 | 285 | 547 | 204 | 474 | 1.15e-95 | 303 |
| MS.gene44437.t1 | AT5G65510 | 58.182 | 275 | 99 | 2 | 285 | 547 | 204 | 474 | 1.15e-95 | 303 |
| MS.gene44437.t1 | AT5G65510 | 58.182 | 275 | 99 | 2 | 285 | 547 | 146 | 416 | 1.15e-95 | 301 |
| MS.gene44437.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 203 | 403 | 1.39e-94 | 302 |
| MS.gene44437.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 203 | 403 | 1.39e-94 | 302 |
| MS.gene44437.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 226 | 426 | 2.48e-94 | 302 |
| MS.gene44437.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 241 | 441 | 2.71e-94 | 303 |
| MS.gene44437.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 241 | 441 | 2.71e-94 | 303 |
| MS.gene44437.t1 | AT5G10510 | 72.637 | 201 | 52 | 1 | 285 | 485 | 203 | 400 | 5.55e-90 | 290 |
| MS.gene44437.t1 | AT5G10510 | 66.063 | 221 | 55 | 1 | 285 | 485 | 241 | 461 | 4.82e-87 | 284 |
| MS.gene44437.t1 | AT5G65510 | 73.292 | 161 | 43 | 0 | 285 | 445 | 146 | 306 | 1.80e-83 | 265 |
| MS.gene44437.t1 | AT3G54320 | 69.822 | 169 | 51 | 0 | 308 | 476 | 61 | 229 | 6.42e-73 | 242 |
| MS.gene44437.t1 | AT3G54320 | 69.822 | 169 | 51 | 0 | 308 | 476 | 61 | 229 | 8.14e-73 | 242 |
| MS.gene44437.t1 | AT1G79700 | 69.231 | 169 | 52 | 0 | 308 | 476 | 48 | 216 | 6.04e-67 | 222 |
| MS.gene44437.t1 | AT1G16060 | 68.208 | 173 | 55 | 0 | 304 | 476 | 50 | 222 | 1.95e-65 | 219 |
| MS.gene44437.t1 | AT1G79700 | 65.089 | 169 | 49 | 1 | 308 | 476 | 48 | 206 | 3.34e-59 | 201 |
| MS.gene44437.t1 | AT3G54320 | 70.992 | 131 | 38 | 0 | 346 | 476 | 33 | 163 | 3.11e-53 | 187 |
| MS.gene44437.t1 | AT3G54320 | 70.992 | 131 | 38 | 0 | 346 | 476 | 33 | 163 | 3.11e-53 | 187 |
| MS.gene44437.t1 | AT1G79700 | 68.702 | 131 | 41 | 0 | 346 | 476 | 10 | 140 | 1.78e-45 | 162 |
| MS.gene44437.t1 | AT4G36920 | 43.548 | 248 | 108 | 5 | 236 | 479 | 68 | 287 | 2.71e-45 | 167 |
| MS.gene44437.t1 | AT4G36920 | 43.548 | 248 | 108 | 5 | 236 | 479 | 68 | 287 | 2.71e-45 | 167 |
| MS.gene44437.t1 | AT2G41710 | 57.895 | 152 | 56 | 2 | 285 | 436 | 46 | 189 | 7.90e-45 | 166 |
| MS.gene44437.t1 | AT5G67180 | 50.282 | 177 | 77 | 3 | 312 | 488 | 96 | 261 | 1.10e-44 | 161 |
| MS.gene44437.t1 | AT1G16060 | 68.421 | 133 | 42 | 0 | 344 | 476 | 20 | 152 | 1.34e-44 | 160 |
| MS.gene44437.t1 | AT5G67180 | 50.562 | 178 | 77 | 3 | 312 | 489 | 96 | 262 | 1.72e-44 | 161 |
| MS.gene44437.t1 | AT2G41710 | 57.895 | 152 | 56 | 2 | 285 | 436 | 46 | 189 | 1.84e-44 | 166 |
| MS.gene44437.t1 | AT5G67180 | 50.562 | 178 | 77 | 3 | 312 | 489 | 96 | 262 | 4.66e-44 | 162 |
| MS.gene44437.t1 | AT1G79700 | 67.442 | 129 | 42 | 0 | 348 | 476 | 6 | 134 | 1.58e-43 | 156 |
| MS.gene44437.t1 | AT2G41710 | 56.051 | 157 | 56 | 3 | 285 | 436 | 46 | 194 | 2.01e-42 | 159 |
| MS.gene44437.t1 | AT2G28550 | 44.053 | 227 | 94 | 8 | 312 | 528 | 153 | 356 | 3.31e-41 | 156 |
| MS.gene44437.t1 | AT2G41710 | 61.983 | 121 | 41 | 1 | 316 | 436 | 109 | 224 | 3.71e-38 | 147 |
| MS.gene44437.t1 | AT2G28550 | 51.064 | 141 | 58 | 3 | 312 | 452 | 153 | 282 | 6.99e-35 | 135 |
| MS.gene44437.t1 | AT5G67180 | 50.000 | 146 | 62 | 3 | 312 | 457 | 96 | 230 | 5.36e-34 | 130 |
| MS.gene44437.t1 | AT2G28550 | 40.969 | 227 | 86 | 9 | 312 | 528 | 153 | 341 | 3.58e-33 | 133 |
| MS.gene44437.t1 | AT3G54320 | 72.727 | 88 | 24 | 0 | 389 | 476 | 1 | 88 | 7.75e-32 | 125 |
| MS.gene44437.t1 | AT1G16060 | 70.455 | 88 | 26 | 0 | 389 | 476 | 1 | 88 | 6.57e-31 | 120 |
| MS.gene44437.t1 | AT1G16060 | 70.455 | 88 | 26 | 0 | 389 | 476 | 1 | 88 | 6.57e-31 | 120 |
| MS.gene44437.t1 | AT1G16060 | 70.455 | 88 | 26 | 0 | 389 | 476 | 1 | 88 | 6.57e-31 | 120 |
| MS.gene44437.t1 | AT1G16060 | 70.455 | 88 | 26 | 0 | 389 | 476 | 1 | 88 | 6.57e-31 | 120 |
| MS.gene44437.t1 | AT2G28550 | 51.181 | 127 | 51 | 3 | 312 | 438 | 153 | 268 | 2.26e-30 | 120 |
| MS.gene44437.t1 | AT2G28550 | 51.181 | 127 | 51 | 3 | 312 | 438 | 153 | 268 | 2.26e-30 | 120 |
| MS.gene44437.t1 | AT2G39250 | 44.643 | 112 | 52 | 2 | 313 | 424 | 109 | 210 | 6.78e-27 | 110 |
| MS.gene44437.t1 | AT2G39250 | 40.909 | 132 | 68 | 2 | 293 | 424 | 89 | 210 | 2.26e-26 | 110 |
| MS.gene44437.t1 | AT5G60120 | 47.287 | 129 | 57 | 3 | 309 | 437 | 157 | 274 | 2.92e-23 | 103 |
| MS.gene44437.t1 | AT5G60120 | 47.287 | 129 | 57 | 3 | 309 | 437 | 157 | 274 | 2.92e-23 | 103 |
| MS.gene44437.t1 | AT5G60120 | 47.287 | 129 | 57 | 3 | 309 | 437 | 157 | 274 | 2.92e-23 | 103 |
| MS.gene44437.t1 | AT5G60120 | 41.615 | 161 | 68 | 5 | 309 | 469 | 157 | 291 | 4.09e-23 | 103 |
| MS.gene44437.t1 | AT5G60120 | 41.615 | 161 | 68 | 5 | 309 | 469 | 157 | 291 | 5.03e-23 | 103 |
| MS.gene44437.t1 | AT2G28550 | 38.342 | 193 | 81 | 7 | 346 | 528 | 11 | 175 | 5.67e-23 | 100 |
| MS.gene44437.t1 | AT5G60120 | 41.615 | 161 | 68 | 5 | 309 | 469 | 157 | 291 | 6.42e-23 | 103 |
| MS.gene44437.t1 | AT3G54990 | 48.598 | 107 | 45 | 2 | 312 | 418 | 122 | 218 | 6.06e-22 | 95.9 |
| MS.gene44437.t1 | AT3G54990 | 48.598 | 107 | 45 | 2 | 312 | 418 | 122 | 218 | 3.56e-21 | 95.9 |
| MS.gene44437.t1 | AT1G16060 | 77.193 | 57 | 13 | 0 | 420 | 476 | 10 | 66 | 4.10e-16 | 77.4 |
| MS.gene44437.t1 | AT1G03800 | 53.226 | 62 | 28 | 1 | 415 | 476 | 53 | 113 | 8.64e-12 | 66.2 |
| MS.gene44437.t1 | AT5G65130 | 34.752 | 141 | 68 | 5 | 383 | 500 | 72 | 211 | 8.53e-11 | 63.9 |
| MS.gene44437.t1 | AT5G65130 | 34.752 | 141 | 68 | 5 | 383 | 500 | 74 | 213 | 9.29e-11 | 63.5 |
Find 105 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATAGTAATTTGAATTCT+TGG | 0.209522 | 8.1:-25035353 | MS.gene44437:CDS |
| CAAGAATTCAAATTACTATT+TGG | 0.219550 | 8.1:+25035354 | None:intergenic |
| AGTAACTATTGTTACTCTTA+TGG | 0.248617 | 8.1:-25038293 | MS.gene44437:CDS |
| AGGAAATCTATTGATACTTT+TGG | 0.282332 | 8.1:-25037495 | MS.gene44437:CDS |
| TTCAACAGCTTCAAAACTAT+TGG | 0.285703 | 8.1:-25035388 | MS.gene44437:CDS |
| AATATTGGTTCAATGGCTTA+TGG | 0.295832 | 8.1:-25037675 | MS.gene44437:CDS |
| CATTTCAATGCAGAAGAATA+TGG | 0.299462 | 8.1:-25035655 | MS.gene44437:CDS |
| GGAGATATGAAGCTCATCTA+TGG | 0.306792 | 8.1:-25037312 | MS.gene44437:CDS |
| GGGACCCTTCACAACATCTT+AGG | 0.319809 | 8.1:-25035332 | MS.gene44437:CDS |
| ATAAGCCATTGAACCAATAT+TGG | 0.320548 | 8.1:+25037677 | None:intergenic |
| AACCATGAGTTGATGTTAGA+AGG | 0.326730 | 8.1:-25037873 | MS.gene44437:CDS |
| CTGTTGAAGTTGTTGATGTT+GGG | 0.335268 | 8.1:+25035617 | None:intergenic |
| ACATTAACAATGAAAATAAC+TGG | 0.340271 | 8.1:-25038457 | MS.gene44437:CDS |
| AAATAGTAATTTGAATTCTT+GGG | 0.341154 | 8.1:-25035352 | MS.gene44437:CDS |
| GTTCTTTCATTCTCAAATCT+TGG | 0.342403 | 8.1:+25035588 | None:intergenic |
| GACTTAGTGGTTTAAAGAAC+TGG | 0.346259 | 8.1:-25037788 | MS.gene44437:CDS |
| ATCAGATTTGAGAGGCATAA+TGG | 0.354338 | 8.1:+25038232 | None:intergenic |
| TCAAGCAGCACTCAAGTATT+GGG | 0.359648 | 8.1:-25036776 | MS.gene44437:CDS |
| CATATTCTTCTGCATTGAAA+TGG | 0.369322 | 8.1:+25035656 | None:intergenic |
| CTTGCCATCTTCCATGTTGA+TGG | 0.372286 | 8.1:+25036307 | None:intergenic |
| GGTAATAAAGATCTATATCT+TGG | 0.375013 | 8.1:-25036264 | MS.gene44437:CDS |
| AAAGAAGGCCAAAGCAGAAA+AGG | 0.375414 | 8.1:-25037274 | MS.gene44437:CDS |
| TGTATCAAATGCTTCTTCAT+TGG | 0.379502 | 8.1:-25035484 | MS.gene44437:CDS |
| TGATGGATCTCTTTATGAAA+TGG | 0.383299 | 8.1:-25038213 | MS.gene44437:CDS |
| TCTGTTGAAGTTGTTGATGT+TGG | 0.394185 | 8.1:+25035616 | None:intergenic |
| AGCAGAAGCAAATTGTTCAT+AGG | 0.397213 | 8.1:-25037515 | MS.gene44437:CDS |
| TGATGAGACACAGTTTATCT+TGG | 0.408484 | 8.1:-25036967 | MS.gene44437:intron |
| TCTCCTCAAATGAATAATAT+CGG | 0.410023 | 8.1:-25038419 | MS.gene44437:CDS |
| AACAATGAAAATAACTGGTT+AGG | 0.421756 | 8.1:-25038452 | MS.gene44437:CDS |
| TGGATCCAATATTGGTTCAA+TGG | 0.423285 | 8.1:-25037682 | MS.gene44437:CDS |
| GGTGAAGATCATGGACTTAG+TGG | 0.425302 | 8.1:-25037801 | MS.gene44437:CDS |
| TCAGATTTGAGAGGCATAAT+GGG | 0.436788 | 8.1:+25038233 | None:intergenic |
| TTTATTAGGCATAGGTGGAC+TGG | 0.438736 | 8.1:-25037334 | MS.gene44437:intron |
| ATCAAGCAGCACTCAAGTAT+TGG | 0.444500 | 8.1:-25036777 | MS.gene44437:CDS |
| ACACCGATATTATTCATTTG+AGG | 0.447211 | 8.1:+25038416 | None:intergenic |
| TATAATATGACAACTGTTGT+TGG | 0.447627 | 8.1:+25037910 | None:intergenic |
| ACAAGCTTGCAAAATCTCTC+TGG | 0.450442 | 8.1:-25035420 | MS.gene44437:CDS |
| TCAACATTGAACAAGCTAGA+AGG | 0.451377 | 8.1:-25035764 | MS.gene44437:CDS |
| GTTGTTGATGTTGGGAGGAT+TGG | 0.451764 | 8.1:+25035625 | None:intergenic |
| GGTGAATGTGGATCCAATAT+TGG | 0.454709 | 8.1:-25037690 | MS.gene44437:CDS |
| GGAAGATGGCAAGCTCGAAT+TGG | 0.460222 | 8.1:-25036297 | MS.gene44437:CDS |
| CCTTGTTACTCCTCTGTACA+TGG | 0.462036 | 8.1:+25036447 | None:intergenic |
| TGTTGAAAATTCTGTTGCTA+TGG | 0.468546 | 8.1:-25037568 | MS.gene44437:CDS |
| TCAAACATGGGTGAAGATCA+TGG | 0.480026 | 8.1:-25037810 | MS.gene44437:CDS |
| CAAAGAACCTCTCAATATAG+AGG | 0.481584 | 8.1:-25037471 | MS.gene44437:CDS |
| ATGAAATGGAAGCTCTTAGC+AGG | 0.491080 | 8.1:-25038199 | MS.gene44437:CDS |
| AATATGTTGCTCATTTAAGA+AGG | 0.492255 | 8.1:-25036572 | MS.gene44437:intron |
| GAGAGAAAATATGAAGAGAA+TGG | 0.493769 | 8.1:-25038501 | None:intergenic |
| CAAAGCAGAAAAGGAAGACA+AGG | 0.499730 | 8.1:-25037265 | MS.gene44437:intron |
| CTGGCATCTGAGGCAAAGAA+AGG | 0.499839 | 8.1:+25035304 | None:intergenic |
| GCTCGAATTGGTAGAGTAGC+TGG | 0.499873 | 8.1:-25036285 | MS.gene44437:CDS |
| GAGTAACAATAGTTACTAAG+AGG | 0.502157 | 8.1:+25038299 | None:intergenic |
| TTGTTATCATATGCAGAAGA+AGG | 0.507972 | 8.1:+25035690 | None:intergenic |
| TGATCATGTCCATGACTAGC+TGG | 0.509563 | 8.1:+25037750 | None:intergenic |
| GGACTTGAACATGAAAATGC+TGG | 0.514334 | 8.1:-25038272 | MS.gene44437:CDS |
| TAGCTTGTTCAATGTTGAGA+AGG | 0.523772 | 8.1:+25035769 | None:intergenic |
| AATGAAGAATATGACAAGAC+AGG | 0.524291 | 8.1:-25036595 | MS.gene44437:CDS |
| TTATTAGGCATAGGTGGACT+GGG | 0.524849 | 8.1:-25037333 | MS.gene44437:intron |
| TGGTAAAAGCTTGCTTGAAG+TGG | 0.527376 | 8.1:+25038329 | None:intergenic |
| GCAGAAGCAGAAGCAGAAGA+AGG | 0.529348 | 8.1:+25038365 | None:intergenic |
| GTACTACTACATGCATAATG+AGG | 0.531601 | 8.1:+25038002 | None:intergenic |
| ATTATGCCTCTCAAATCTGA+TGG | 0.532902 | 8.1:-25038230 | MS.gene44437:CDS |
| AAGCAAAGTCAAACTTCAAG+TGG | 0.535525 | 8.1:-25037846 | MS.gene44437:CDS |
| GACACCATCAACATGGAAGA+TGG | 0.537820 | 8.1:-25036311 | MS.gene44437:CDS |
| ACCCTTCTAACATCAACTCA+TGG | 0.539230 | 8.1:+25037871 | None:intergenic |
| ACCATGAGTTGATGTTAGAA+GGG | 0.549490 | 8.1:-25037872 | MS.gene44437:CDS |
| TACTACTACATGCATAATGA+GGG | 0.551148 | 8.1:+25038003 | None:intergenic |
| GCTATGGATACAAAGAAAAG+AGG | 0.553448 | 8.1:-25037552 | MS.gene44437:CDS |
| AATTGTTTATTAGGCATAGG+TGG | 0.555057 | 8.1:-25037339 | MS.gene44437:intron |
| TGGCATCTGAGGCAAAGAAA+GGG | 0.555089 | 8.1:+25035305 | None:intergenic |
| GATGATTGTTCCTGTTGTAG+AGG | 0.558499 | 8.1:-25037721 | MS.gene44437:CDS |
| TTGAAGTTGTTGATGTTGGG+AGG | 0.565145 | 8.1:+25035620 | None:intergenic |
| ACTTAGTGGTTTAAAGAACT+GGG | 0.566240 | 8.1:-25037787 | MS.gene44437:CDS |
| GACAACAGTTGCAAGAAAGA+AGG | 0.566962 | 8.1:-25037289 | MS.gene44437:CDS |
| GGGAAGTTTATGTGAGTGGA+TGG | 0.574919 | 8.1:+25036751 | None:intergenic |
| AACAGGGAAGTTTATGTGAG+TGG | 0.577161 | 8.1:+25036747 | None:intergenic |
| ACACAGCTAGACTGAGAGCT+AGG | 0.578119 | 8.1:+25037621 | None:intergenic |
| GAGATATGAAGCTCATCTAT+GGG | 0.580404 | 8.1:-25037311 | MS.gene44437:CDS |
| AGTTTGAGCAGTTCAAGAGA+AGG | 0.582795 | 8.1:-25035456 | MS.gene44437:CDS |
| GAAGGCCTAAGATGTTGTGA+AGG | 0.585697 | 8.1:+25035327 | None:intergenic |
| GAGGAAAATGAAGGTGAATG+TGG | 0.588553 | 8.1:-25037702 | MS.gene44437:CDS |
| AAAAGCAGTGGATTCTCAAG+AGG | 0.594604 | 8.1:-25036475 | MS.gene44437:CDS |
| AAAGCAGTGGATTCTCAAGA+GGG | 0.594710 | 8.1:-25036474 | MS.gene44437:CDS |
| TGTTACACCTCTATATTGAG+AGG | 0.601910 | 8.1:+25037464 | None:intergenic |
| CTCAATATAGAGGTGTAACA+AGG | 0.610038 | 8.1:-25037461 | MS.gene44437:intron |
| GTTTCATCAAGAAGTAGTTG+AGG | 0.620030 | 8.1:-25035529 | MS.gene44437:CDS |
| AACATGCTGTCTAAGCTCAA+AGG | 0.623476 | 8.1:+25037963 | None:intergenic |
| AAATTATCAAAATCAACTTG+AGG | 0.631469 | 8.1:-25036619 | MS.gene44437:CDS |
| GGTAGCAGACACCATCAACA+TGG | 0.639807 | 8.1:-25036318 | MS.gene44437:intron |
| CCATGTACAGAGGAGTAACA+AGG | 0.640756 | 8.1:-25036447 | MS.gene44437:intron |
| ATTGCAGCTATAAAATTCAG+AGG | 0.642745 | 8.1:-25035858 | MS.gene44437:CDS |
| ATCTGAGGCAAAGAAAGGGA+AGG | 0.647053 | 8.1:+25035309 | None:intergenic |
| AGTTACTAAGAGGAGAAGAG+TGG | 0.647916 | 8.1:+25038309 | None:intergenic |
| AAGGCCTAAGATGTTGTGAA+GGG | 0.651408 | 8.1:+25035328 | None:intergenic |
| CCTGTTGTAGAGGAAAATGA+AGG | 0.654487 | 8.1:-25037711 | MS.gene44437:CDS |
| CAAGCAGCACTCAAGTATTG+GGG | 0.655625 | 8.1:-25036775 | MS.gene44437:CDS |
| AGAGATCCATCAGATTTGAG+AGG | 0.660630 | 8.1:+25038224 | None:intergenic |
| CTTAGCAGGTCACAAACACA+AGG | 0.664909 | 8.1:-25038185 | MS.gene44437:intron |
| AGCTAGAAGGAACAAAGAGG+TGG | 0.670383 | 8.1:-25035751 | MS.gene44437:CDS |
| AAGCAGTGGATTCTCAAGAG+GGG | 0.699895 | 8.1:-25036473 | MS.gene44437:CDS |
| AGAGGGGCTTCCATGTACAG+AGG | 0.703240 | 8.1:-25036457 | MS.gene44437:CDS |
| AGCAGATGACATATTCTGTG+AGG | 0.705618 | 8.1:+25037593 | None:intergenic |
| ACTACTACATGCATAATGAG+GGG | 0.710323 | 8.1:+25038004 | None:intergenic |
| ACAAGCTAGAAGGAACAAAG+AGG | 0.715606 | 8.1:-25035754 | MS.gene44437:CDS |
| CATGTTATCCAAAGACACTG+AGG | 0.754091 | 8.1:+25035551 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTAATTATATTTTAA+TGG | + | chr8.1:25037380-25037399 | None:intergenic | 0.0% |
| !!! | ATATTTTATTATATCAAAGT+TGG | + | chr8.1:25037951-25037970 | None:intergenic | 10.0% |
| !! | AAATAGTAATTTGAATTCTT+GGG | - | chr8.1:25038417-25038436 | MS.gene44437:CDS | 15.0% |
| !! | AACAAAATAAAAAATGAGAA+TGG | + | chr8.1:25036735-25036754 | None:intergenic | 15.0% |
| !! | AGTACATTACAATATTAAAT+TGG | + | chr8.1:25037588-25037607 | None:intergenic | 15.0% |
| !! | CAATTAATAAACCTTATAAA+TGG | + | chr8.1:25037093-25037112 | None:intergenic | 15.0% |
| !!! | ATTCCAAAATTTTGATTTTA+GGG | - | chr8.1:25036932-25036951 | MS.gene44437:intron | 15.0% |
| !!! | TATGTTTTGAATTGTTTATT+AGG | - | chr8.1:25036421-25036440 | MS.gene44437:intron | 15.0% |
| !!! | TTTTGACAAAAACTATATTT+TGG | + | chr8.1:25036583-25036602 | None:intergenic | 15.0% |
| !! | AAATTATCAAAATCAACTTG+AGG | - | chr8.1:25037150-25037169 | MS.gene44437:intron | 20.0% |
| !! | ACATTAACAATGAAAATAAC+TGG | - | chr8.1:25035312-25035331 | MS.gene44437:CDS | 20.0% |
| !! | ATATGATGTTGAAAAAATCA+TGG | - | chr8.1:25037967-25037986 | MS.gene44437:CDS | 20.0% |
| !! | ATTATGTGTGTATTAATGTA+TGG | - | chr8.1:25035629-25035648 | MS.gene44437:CDS | 20.0% |
| !! | CAAATAGTAATTTGAATTCT+TGG | - | chr8.1:25038416-25038435 | MS.gene44437:CDS | 20.0% |
| !! | CAAGAATTCAAATTACTATT+TGG | + | chr8.1:25038418-25038437 | None:intergenic | 20.0% |
| !! | CACAAAAATAGATAAAAAGT+GGG | + | chr8.1:25035682-25035701 | None:intergenic | 20.0% |
| !! | TCACAAAAATAGATAAAAAG+TGG | + | chr8.1:25035683-25035702 | None:intergenic | 20.0% |
| !! | TTGTTTCAATTCCATTTATA+AGG | - | chr8.1:25037079-25037098 | MS.gene44437:intron | 20.0% |
| !!! | AAATTTTCATCAATCAAACA+TGG | - | chr8.1:25035946-25035965 | MS.gene44437:intron | 20.0% |
| !!! | AATGATTGTTATTACTAACA+GGG | + | chr8.1:25037041-25037060 | None:intergenic | 20.0% |
| !!! | AATTTTCATCAATCAAACAT+GGG | - | chr8.1:25035947-25035966 | MS.gene44437:intron | 20.0% |
| !!! | CATTCCAAAATTTTGATTTT+AGG | - | chr8.1:25036931-25036950 | MS.gene44437:intron | 20.0% |
| !!! | CTTGGATTATATTTTTACTT+GGG | + | chr8.1:25037806-25037825 | None:intergenic | 20.0% |
| !!! | TAATGATTGTTATTACTAAC+AGG | + | chr8.1:25037042-25037061 | None:intergenic | 20.0% |
| !!! | TGTTTTGTTGAATTTGATTT+TGG | + | chr8.1:25035832-25035851 | None:intergenic | 20.0% |
| !!! | TTCCAAAATTTTGATTTTAG+GGG | - | chr8.1:25036933-25036952 | MS.gene44437:intron | 20.0% |
| !!! | TTTTTAGGTAATGAAACTAT+GGG | - | chr8.1:25035740-25035759 | MS.gene44437:CDS | 20.0% |
| !!! | TTTTTTAGGTAATGAAACTA+TGG | - | chr8.1:25035739-25035758 | MS.gene44437:CDS | 20.0% |
| ! | AACAATGAAAATAACTGGTT+AGG | - | chr8.1:25035317-25035336 | MS.gene44437:CDS | 25.0% |
| ! | AATATGTTGCTCATTTAAGA+AGG | - | chr8.1:25037197-25037216 | MS.gene44437:intron | 25.0% |
| ! | AATGATACTATGTGAACATT+TGG | - | chr8.1:25036531-25036550 | MS.gene44437:intron | 25.0% |
| ! | AGTAACTATTGTTACTCTTA+TGG | - | chr8.1:25035476-25035495 | MS.gene44437:CDS | 25.0% |
| ! | CCAAGTAAAAATATAATCCA+AGG | - | chr8.1:25037804-25037823 | MS.gene44437:CDS | 25.0% |
| ! | GGTAATAAAGATCTATATCT+TGG | - | chr8.1:25037505-25037524 | MS.gene44437:CDS | 25.0% |
| ! | TATAATATGACAACTGTTGT+TGG | + | chr8.1:25035862-25035881 | None:intergenic | 25.0% |
| ! | TCTCCTCAAATGAATAATAT+CGG | - | chr8.1:25035350-25035369 | MS.gene44437:CDS | 25.0% |
| ! | TTAAATTGGTACATGATCAA+TGG | + | chr8.1:25037574-25037593 | None:intergenic | 25.0% |
| ! | TTGAATTGTTTATTAGGCAT+AGG | - | chr8.1:25036427-25036446 | MS.gene44437:intron | 25.0% |
| ! | TTTCATTCTCTTATAACAGT+TGG | - | chr8.1:25037126-25037145 | MS.gene44437:intron | 25.0% |
| !! | AGGAAATCTATTGATACTTT+TGG | - | chr8.1:25036274-25036293 | MS.gene44437:CDS | 25.0% |
| !! | CTCATTGAAATGAAACTTTT+AGG | - | chr8.1:25037857-25037876 | MS.gene44437:CDS | 25.0% |
| !!! | CCAAAACTAGAGAATTTTTT+AGG | - | chr8.1:25035725-25035744 | MS.gene44437:CDS | 25.0% |
| !!! | CCTAAAAAATTCTCTAGTTT+TGG | + | chr8.1:25035728-25035747 | None:intergenic | 25.0% |
| !!! | CCTTGGATTATATTTTTACT+TGG | + | chr8.1:25037807-25037826 | None:intergenic | 25.0% |
| !!! | TCCAAAATTTTGATTTTAGG+GGG | - | chr8.1:25036934-25036953 | MS.gene44437:intron | 25.0% |
| !!! | TTGCTTATGTTTTTAACATG+AGG | - | chr8.1:25036887-25036906 | MS.gene44437:intron | 25.0% |
| !!! | TTTGTTATTAGATTCTGTCT+TGG | - | chr8.1:25036857-25036876 | MS.gene44437:intron | 25.0% |
| !!! | TTTTAGGTAATGAAACTATG+GGG | - | chr8.1:25035741-25035760 | MS.gene44437:CDS | 25.0% |
| AATGAAGAATATGACAAGAC+AGG | - | chr8.1:25037174-25037193 | MS.gene44437:intron | 30.0% | |
| AATTGTTTATTAGGCATAGG+TGG | - | chr8.1:25036430-25036449 | MS.gene44437:intron | 30.0% | |
| ACACCGATATTATTCATTTG+AGG | + | chr8.1:25035356-25035375 | None:intergenic | 30.0% | |
| ACTTAGTGGTTTAAAGAACT+GGG | - | chr8.1:25035982-25036001 | MS.gene44437:intron | 30.0% | |
| ATAAGCCATTGAACCAATAT+TGG | + | chr8.1:25036095-25036114 | None:intergenic | 30.0% | |
| ATTGCAGCTATAAAATTCAG+AGG | - | chr8.1:25037911-25037930 | MS.gene44437:CDS | 30.0% | |
| CATATTCTTCTGCATTGAAA+TGG | + | chr8.1:25038116-25038135 | None:intergenic | 30.0% | |
| CATTTCAATGCAGAAGAATA+TGG | - | chr8.1:25038114-25038133 | MS.gene44437:intron | 30.0% | |
| CTTTCAAAATCTTGTTCACT+TGG | - | chr8.1:25037430-25037449 | MS.gene44437:intron | 30.0% | |
| GAGTAACAATAGTTACTAAG+AGG | + | chr8.1:25035473-25035492 | None:intergenic | 30.0% | |
| GTTCTTTCATTCTCAAATCT+TGG | + | chr8.1:25038184-25038203 | None:intergenic | 30.0% | |
| TACTACTACATGCATAATGA+GGG | + | chr8.1:25035769-25035788 | None:intergenic | 30.0% | |
| TGGAATTGAAACAAAAGACA+TGG | + | chr8.1:25037073-25037092 | None:intergenic | 30.0% | |
| TGTATCAAATGCTTCTTCAT+TGG | - | chr8.1:25038285-25038304 | MS.gene44437:CDS | 30.0% | |
| TGTTGAAAATTCTGTTGCTA+TGG | - | chr8.1:25036201-25036220 | MS.gene44437:intron | 30.0% | |
| TTCAACAGCTTCAAAACTAT+TGG | - | chr8.1:25038381-25038400 | MS.gene44437:CDS | 30.0% | |
| TTGTTATCATATGCAGAAGA+AGG | + | chr8.1:25038082-25038101 | None:intergenic | 30.0% | |
| ! | ACCCCCTAAAATCAAAATTT+TGG | + | chr8.1:25036938-25036957 | None:intergenic | 30.0% |
| ! | GTTTAAAGAACTGGGTTTTA+AGG | - | chr8.1:25035990-25036009 | MS.gene44437:intron | 30.0% |
| ! | TGATGGATCTCTTTATGAAA+TGG | - | chr8.1:25035556-25035575 | MS.gene44437:CDS | 30.0% |
| ! | TTTAACTTTCATGCTAACCT+TGG | + | chr8.1:25037824-25037843 | None:intergenic | 30.0% |
| ! | TTTTATAGCTGCAATGTCAT+AGG | + | chr8.1:25037906-25037925 | None:intergenic | 30.0% |
| !! | AATATTGGTTCAATGGCTTA+TGG | - | chr8.1:25036094-25036113 | MS.gene44437:intron | 30.0% |
| !! | AATTTTGATCCCACAAACAT+TGG | + | chr8.1:25037782-25037801 | None:intergenic | 30.0% |
| !!! | AATAGTTTTGAAGCTGTTGA+AGG | + | chr8.1:25038382-25038401 | None:intergenic | 30.0% |
| !!! | TGTTTTTTGCTTTCTTTGCT+TGG | - | chr8.1:25036751-25036770 | MS.gene44437:CDS | 30.0% |
| AAGCAAAGTCAAACTTCAAG+TGG | - | chr8.1:25035923-25035942 | MS.gene44437:intron | 35.0% | |
| ACTACTACATGCATAATGAG+GGG | + | chr8.1:25035768-25035787 | None:intergenic | 35.0% | |
| AGCAGAAGCAAATTGTTCAT+AGG | - | chr8.1:25036254-25036273 | MS.gene44437:intron | 35.0% | |
| ATGTTCTGTTCCAATGTTTG+TGG | - | chr8.1:25037769-25037788 | MS.gene44437:CDS | 35.0% | |
| ATTATGCCTCTCAAATCTGA+TGG | - | chr8.1:25035539-25035558 | MS.gene44437:CDS | 35.0% | |
| CAAAGAACCTCTCAATATAG+AGG | - | chr8.1:25036298-25036317 | MS.gene44437:CDS | 35.0% | |
| CTGTTGAAGTTGTTGATGTT+GGG | + | chr8.1:25038155-25038174 | None:intergenic | 35.0% | |
| GACTTAGTGGTTTAAAGAAC+TGG | - | chr8.1:25035981-25036000 | MS.gene44437:intron | 35.0% | |
| GAGATATGAAGCTCATCTAT+GGG | - | chr8.1:25036458-25036477 | MS.gene44437:CDS | 35.0% | |
| GATCTTATCAGAAAAAGCAG+TGG | - | chr8.1:25037282-25037301 | MS.gene44437:CDS | 35.0% | |
| GCTATGGATACAAAGAAAAG+AGG | - | chr8.1:25036217-25036236 | MS.gene44437:intron | 35.0% | |
| GTACTACTACATGCATAATG+AGG | + | chr8.1:25035770-25035789 | None:intergenic | 35.0% | |
| GTGAGTTCTTTCATACTCTT+TGG | - | chr8.1:25037536-25037555 | MS.gene44437:CDS | 35.0% | |
| GTTTCATCAAGAAGTAGTTG+AGG | - | chr8.1:25038240-25038259 | MS.gene44437:CDS | 35.0% | |
| TCAACATTGAACAAGCTAGA+AGG | - | chr8.1:25038005-25038024 | MS.gene44437:CDS | 35.0% | |
| TCTGTTGAAGTTGTTGATGT+TGG | + | chr8.1:25038156-25038175 | None:intergenic | 35.0% | |
| TGATGAGACACAGTTTATCT+TGG | - | chr8.1:25036802-25036821 | MS.gene44437:CDS | 35.0% | |
| TGTAATGTACTAGACACATG+TGG | - | chr8.1:25037597-25037616 | MS.gene44437:CDS | 35.0% | |
| TGTTACACCTCTATATTGAG+AGG | + | chr8.1:25036308-25036327 | None:intergenic | 35.0% | |
| TGTTCTGTTCCAATGTTTGT+GGG | - | chr8.1:25037770-25037789 | MS.gene44437:CDS | 35.0% | |
| ! | ATCAGATTTGAGAGGCATAA+TGG | + | chr8.1:25035540-25035559 | None:intergenic | 35.0% |
| ! | CTCAATATAGAGGTGTAACA+AGG | - | chr8.1:25036308-25036327 | MS.gene44437:CDS | 35.0% |
| ! | TCAGATTTGAGAGGCATAAT+GGG | + | chr8.1:25035539-25035558 | None:intergenic | 35.0% |
| ! | TTTTTGCTTTCTTTGCTTGG+CGG | - | chr8.1:25036754-25036773 | MS.gene44437:CDS | 35.0% |
| !! | AACCATGAGTTGATGTTAGA+AGG | - | chr8.1:25035896-25035915 | MS.gene44437:intron | 35.0% |
| !! | AACTTTTTCCTCAGTGTCTT+TGG | - | chr8.1:25038210-25038229 | MS.gene44437:CDS | 35.0% |
| !! | ACCATGAGTTGATGTTAGAA+GGG | - | chr8.1:25035897-25035916 | MS.gene44437:intron | 35.0% |
| !! | GAAACTTTTAGGTACTCAAG+AGG | - | chr8.1:25037868-25037887 | MS.gene44437:CDS | 35.0% |
| !! | GATTTTAGGGGGTTATGATA+TGG | - | chr8.1:25036945-25036964 | MS.gene44437:intron | 35.0% |
| !! | TAGCTTGTTCAATGTTGAGA+AGG | + | chr8.1:25038003-25038022 | None:intergenic | 35.0% |
| !! | TGGATCCAATATTGGTTCAA+TGG | - | chr8.1:25036087-25036106 | MS.gene44437:intron | 35.0% |
| AAAGAAGGCCAAAGCAGAAA+AGG | - | chr8.1:25036495-25036514 | MS.gene44437:intron | 40.0% | |
| AACAGGGAAGTTTATGTGAG+TGG | + | chr8.1:25037025-25037044 | None:intergenic | 40.0% | |
| AACATGCTGTCTAAGCTCAA+AGG | + | chr8.1:25035809-25035828 | None:intergenic | 40.0% | |
| AAGGCCTAAGATGTTGTGAA+GGG | + | chr8.1:25038444-25038463 | None:intergenic | 40.0% | |
| ACAAGCTAGAAGGAACAAAG+AGG | - | chr8.1:25038015-25038034 | MS.gene44437:CDS | 40.0% | |
| ACAAGCTTGCAAAATCTCTC+TGG | - | chr8.1:25038349-25038368 | MS.gene44437:CDS | 40.0% | |
| ACCCTTCTAACATCAACTCA+TGG | + | chr8.1:25035901-25035920 | None:intergenic | 40.0% | |
| AGAGATCCATCAGATTTGAG+AGG | + | chr8.1:25035548-25035567 | None:intergenic | 40.0% | |
| AGCAGATGACATATTCTGTG+AGG | + | chr8.1:25036179-25036198 | None:intergenic | 40.0% | |
| AGTTACTAAGAGGAGAAGAG+TGG | + | chr8.1:25035463-25035482 | None:intergenic | 40.0% | |
| AGTTTGAGCAGTTCAAGAGA+AGG | - | chr8.1:25038313-25038332 | MS.gene44437:CDS | 40.0% | |
| ATCAAGCAGCACTCAAGTAT+TGG | - | chr8.1:25036992-25037011 | MS.gene44437:intron | 40.0% | |
| ATGAAATGGAAGCTCTTAGC+AGG | - | chr8.1:25035570-25035589 | MS.gene44437:CDS | 40.0% | |
| CAAAGCAGAAAAGGAAGACA+AGG | - | chr8.1:25036504-25036523 | MS.gene44437:intron | 40.0% | |
| CATGTTATCCAAAGACACTG+AGG | + | chr8.1:25038221-25038240 | None:intergenic | 40.0% | |
| CATTAGACATGACACTGACA+CGG | + | chr8.1:25037660-25037679 | None:intergenic | 40.0% | |
| CCTGTTGTAGAGGAAAATGA+AGG | - | chr8.1:25036058-25036077 | MS.gene44437:intron | 40.0% | |
| GACAACAGTTGCAAGAAAGA+AGG | - | chr8.1:25036480-25036499 | MS.gene44437:intron | 40.0% | |
| GAGGAAAATGAAGGTGAATG+TGG | - | chr8.1:25036067-25036086 | MS.gene44437:intron | 40.0% | |
| GATGATTGTTCCTGTTGTAG+AGG | - | chr8.1:25036048-25036067 | MS.gene44437:intron | 40.0% | |
| GGACTTGAACATGAAAATGC+TGG | - | chr8.1:25035497-25035516 | MS.gene44437:CDS | 40.0% | |
| GGAGATATGAAGCTCATCTA+TGG | - | chr8.1:25036457-25036476 | MS.gene44437:CDS | 40.0% | |
| GGTGAATGTGGATCCAATAT+TGG | - | chr8.1:25036079-25036098 | MS.gene44437:intron | 40.0% | |
| TCAAACATGGGTGAAGATCA+TGG | - | chr8.1:25035959-25035978 | MS.gene44437:intron | 40.0% | |
| TCAAGCAGCACTCAAGTATT+GGG | - | chr8.1:25036993-25037012 | MS.gene44437:intron | 40.0% | |
| TTGAAGTTGTTGATGTTGGG+AGG | + | chr8.1:25038152-25038171 | None:intergenic | 40.0% | |
| TTTATTAGGCATAGGTGGAC+TGG | - | chr8.1:25036435-25036454 | MS.gene44437:intron | 40.0% | |
| ! | AAAAGCAGTGGATTCTCAAG+AGG | - | chr8.1:25037294-25037313 | MS.gene44437:CDS | 40.0% |
| ! | AAAGCAGTGGATTCTCAAGA+GGG | - | chr8.1:25037295-25037314 | MS.gene44437:CDS | 40.0% |
| ! | AGGAATTTTCCAGCTAGTCA+TGG | - | chr8.1:25036010-25036029 | MS.gene44437:intron | 40.0% |
| ! | CCTTCATTTTCCTCTACAAC+AGG | + | chr8.1:25036061-25036080 | None:intergenic | 40.0% |
| ! | CTTGTCTTCCTTTTCTGCTT+TGG | + | chr8.1:25036506-25036525 | None:intergenic | 40.0% |
| ! | GAGGAGTAACAAGGTCTTAT+AGG | - | chr8.1:25037331-25037350 | MS.gene44437:intron | 40.0% |
| ! | GGATTCACACGATGATTTTG+CGG | - | chr8.1:25036552-25036571 | MS.gene44437:intron | 40.0% |
| ! | TGGTAAAAGCTTGCTTGAAG+TGG | + | chr8.1:25035443-25035462 | None:intergenic | 40.0% |
| ! | TTATTAGGCATAGGTGGACT+GGG | - | chr8.1:25036436-25036455 | MS.gene44437:intron | 40.0% |
| ! | TTTTGCTTTCTTTGCTTGGC+GGG | - | chr8.1:25036755-25036774 | MS.gene44437:CDS | 40.0% |
| !! | TTTTGCAAGCTTGTTCTCTC+TGG | + | chr8.1:25038343-25038362 | None:intergenic | 40.0% |
| AGCTAGAAGGAACAAAGAGG+TGG | - | chr8.1:25038018-25038037 | MS.gene44437:CDS | 45.0% | |
| CCATGTACAGAGGAGTAACA+AGG | - | chr8.1:25037322-25037341 | MS.gene44437:CDS | 45.0% | |
| CCTTGTTACTCCTCTGTACA+TGG | + | chr8.1:25037325-25037344 | None:intergenic | 45.0% | |
| CTTAGCAGGTCACAAACACA+AGG | - | chr8.1:25035584-25035603 | MS.gene44437:CDS | 45.0% | |
| CTTGCCATCTTCCATGTTGA+TGG | + | chr8.1:25037465-25037484 | None:intergenic | 45.0% | |
| GAAGGCCTAAGATGTTGTGA+AGG | + | chr8.1:25038445-25038464 | None:intergenic | 45.0% | |
| GACACCATCAACATGGAAGA+TGG | - | chr8.1:25037458-25037477 | MS.gene44437:intron | 45.0% | |
| GGGAAGTTTATGTGAGTGGA+TGG | + | chr8.1:25037021-25037040 | None:intergenic | 45.0% | |
| GGTGAAGATCATGGACTTAG+TGG | - | chr8.1:25035968-25035987 | MS.gene44437:intron | 45.0% | |
| GTTGTTGATGTTGGGAGGAT+TGG | + | chr8.1:25038147-25038166 | None:intergenic | 45.0% | |
| TATACGCGCACAACTACTAG+CGG | + | chr8.1:25037725-25037744 | None:intergenic | 45.0% | |
| TCTGTCCATGCTGCAAAAAC+TGG | + | chr8.1:25038487-25038506 | None:intergenic | 45.0% | |
| TGATCATGTCCATGACTAGC+TGG | + | chr8.1:25036022-25036041 | None:intergenic | 45.0% | |
| TTTGCTTTCTTTGCTTGGCG+GGG | - | chr8.1:25036756-25036775 | MS.gene44437:CDS | 45.0% | |
| ! | AAGCAGTGGATTCTCAAGAG+GGG | - | chr8.1:25037296-25037315 | MS.gene44437:CDS | 45.0% |
| ! | AGATGCCAGTTTTTGCAGCA+TGG | - | chr8.1:25038479-25038498 | MS.gene44437:CDS | 45.0% |
| ! | ATCTGAGGCAAAGAAAGGGA+AGG | + | chr8.1:25038463-25038482 | None:intergenic | 45.0% |
| ! | CAAGCAGCACTCAAGTATTG+GGG | - | chr8.1:25036994-25037013 | MS.gene44437:intron | 45.0% |
| ! | TCACACGATGATTTTGCGGA+CGG | - | chr8.1:25036556-25036575 | MS.gene44437:intron | 45.0% |
| ! | TGGCATCTGAGGCAAAGAAA+GGG | + | chr8.1:25038467-25038486 | None:intergenic | 45.0% |
| ACACAGCTAGACTGAGAGCT+AGG | + | chr8.1:25036151-25036170 | None:intergenic | 50.0% | |
| GCAGAAGCAGAAGCAGAAGA+AGG | + | chr8.1:25035407-25035426 | None:intergenic | 50.0% | |
| GCTCGAATTGGTAGAGTAGC+TGG | - | chr8.1:25037484-25037503 | MS.gene44437:CDS | 50.0% | |
| GCTGCAAAAACTGGCATCTG+AGG | + | chr8.1:25038478-25038497 | None:intergenic | 50.0% | |
| GGAAGATGGCAAGCTCGAAT+TGG | - | chr8.1:25037472-25037491 | MS.gene44437:CDS | 50.0% | |
| GGGACCCTTCACAACATCTT+AGG | - | chr8.1:25038437-25038456 | MS.gene44437:CDS | 50.0% | |
| GGTAGCAGACACCATCAACA+TGG | - | chr8.1:25037451-25037470 | MS.gene44437:intron | 50.0% | |
| ! | CTGGCATCTGAGGCAAAGAA+AGG | + | chr8.1:25038468-25038487 | None:intergenic | 50.0% |
| AGAGGGGCTTCCATGTACAG+AGG | - | chr8.1:25037312-25037331 | MS.gene44437:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 25035278 | 25038513 | 25035278 | ID=MS.gene44437 |
| chr8.1 | mRNA | 25035278 | 25038513 | 25035278 | ID=MS.gene44437.t1;Parent=MS.gene44437 |
| chr8.1 | exon | 25038186 | 25038513 | 25038186 | ID=MS.gene44437.t1.exon1;Parent=MS.gene44437.t1 |
| chr8.1 | CDS | 25038186 | 25038513 | 25038186 | ID=cds.MS.gene44437.t1;Parent=MS.gene44437.t1 |
| chr8.1 | exon | 25037462 | 25038086 | 25037462 | ID=MS.gene44437.t1.exon2;Parent=MS.gene44437.t1 |
| chr8.1 | CDS | 25037462 | 25038086 | 25037462 | ID=cds.MS.gene44437.t1;Parent=MS.gene44437.t1 |
| chr8.1 | exon | 25037266 | 25037348 | 25037266 | ID=MS.gene44437.t1.exon3;Parent=MS.gene44437.t1 |
| chr8.1 | CDS | 25037266 | 25037348 | 25037266 | ID=cds.MS.gene44437.t1;Parent=MS.gene44437.t1 |
| chr8.1 | exon | 25036968 | 25036976 | 25036968 | ID=MS.gene44437.t1.exon4;Parent=MS.gene44437.t1 |
| chr8.1 | CDS | 25036968 | 25036976 | 25036968 | ID=cds.MS.gene44437.t1;Parent=MS.gene44437.t1 |
| chr8.1 | exon | 25036750 | 25036838 | 25036750 | ID=MS.gene44437.t1.exon5;Parent=MS.gene44437.t1 |
| chr8.1 | CDS | 25036750 | 25036838 | 25036750 | ID=cds.MS.gene44437.t1;Parent=MS.gene44437.t1 |
| chr8.1 | exon | 25036573 | 25036646 | 25036573 | ID=MS.gene44437.t1.exon6;Parent=MS.gene44437.t1 |
| chr8.1 | CDS | 25036573 | 25036646 | 25036573 | ID=cds.MS.gene44437.t1;Parent=MS.gene44437.t1 |
| chr8.1 | exon | 25036448 | 25036498 | 25036448 | ID=MS.gene44437.t1.exon7;Parent=MS.gene44437.t1 |
| chr8.1 | CDS | 25036448 | 25036498 | 25036448 | ID=cds.MS.gene44437.t1;Parent=MS.gene44437.t1 |
| chr8.1 | exon | 25036256 | 25036332 | 25036256 | ID=MS.gene44437.t1.exon8;Parent=MS.gene44437.t1 |
| chr8.1 | CDS | 25036256 | 25036332 | 25036256 | ID=cds.MS.gene44437.t1;Parent=MS.gene44437.t1 |
| chr8.1 | exon | 25035278 | 25035912 | 25035278 | ID=MS.gene44437.t1.exon9;Parent=MS.gene44437.t1 |
| chr8.1 | CDS | 25035278 | 25035912 | 25035278 | ID=cds.MS.gene44437.t1;Parent=MS.gene44437.t1 |
| Gene Sequence |
| Protein sequence |
